Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr17

Orthogroup ID

OG0007805

Physical Location & Seq

Genomic Coordinates Reverse (-)

20426249 .. 20428031

Gene Structure 1783 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom17g22010.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1020 bp

ATGTCGAAAAAACCAGATGAAGTGTTGATTGGGTCGATTGACCAGGGCACCACCAGCACCAGATTCATAATCTACGACCGTTCAGCCCGCGCTATTGGGTCCCACCAGGTCGAGTTCACTCAGTTCTACCCGGAAGCCGGGTGGGTCGAGCATGATGCGATGGAGATATTGGAGAGTGTGAGAGTGTGCATGGCGAAGGCGCTGGACAAGGCCACAGCTGATGGGCACAACGTGGACAATGGGCTCAAGGCCATAGGGTTGACCAATCAGAGAGAGACAACTCTGGTCTGGAGCAAATCCACTGGATGTCCTCTCTACAATGCTATTGTTTGGATGGATGTCCGTACCAGTTCTATTTGCAGAAAATTGGAGAAAGAATTATCCGGGGGAAGAACTCATTTTGTGGAAACATGTGGTTTGCCCATAAGCACCTATTTCAGTGCATTGAAGCTGCTCTGGCTGTTGGAAAATGTGGATAAGGTGAAAGAGGCTGTGCAATCAGGGGATGCTCTCTTTGGAACTATAGACACTTGGTTAATCTGGAATTTAACCGGTGGTGTCAAGGGAGGAATACATGTCACTGATGTCTCAAATGCATCGCGGACTATGCTTATGAATCTCAAGACCCTTGAGTGGGATAGTACCATATTGAAAACGTTAGGAATTCCAGCTAAAATTCTGCCCAAAATTGTCAGTAACTCTGAGGTTATTGGAAAAATTAACACAGGATGGCCAATTACTGGAGTCCCAATCTCTGGATGTCTCGGTGATCAACATGCAGCAATGTTAGGGCAAGCTTGCAGGAGAGGAGAGGCCAAAAGCACTTATGGGACGGGGGCTTTCATCCTTCTCAACACTGGTGAAGAGATAATTCAGTCAACGCATGGGCTTCTAAGCACTTTGGCATTCAAACTTGGCCCTAAAGCTCCGACAAATTATGCTCTAGAGGGATCGATTGCTATTGCTGGAGCTGCAGTTCAGTGGCTTAGAGACAGATCGATCACACAGTGGGATCATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004370 GO:0005975 GO:0006066 GO:0006071 GO:0006793 GO:0006796 GO:0008150 GO:0008152 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019400 GO:0019751 GO:0044237 GO:0044238 GO:0044262 GO:0044281 GO:0071704 GO:1901615

KEGG Pathways

Metabolic & Signaling

ko00561 ko01100 ko03320 ko04626 map00561 map01100 map03320 map04626

Pfam Domains

Protein Families

FGGY_C FGGY_N

Protein Analysis

340

Amino Acids

36.89

Weight (kDa)

6.71

Isoelectric Point (pI)

24.7

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FGGY_N	PF00370	10 - 264	2.2e-71	FGGY family of carbohydrate kinases, N-terminal domain
FGGY_C	PF02782	273 - 337	2.3e-07	FGGY family of carbohydrate kinases, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007805)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G80460 AT1G80460
fragaria_vesca	FvH4_6g29330
malus_domestica	MD09G1222300.v1.1 MD17G1215600.v1.1
prunus_persica	Prupe.3G091800_v2.0.a1
pyrus_communis	pycom17g22010 pycom808g00550
rosa_chinensis	RchiOBHm_Chr2g0134571
rosa_laevigata	RLG00000019403 RLG00000019410
rosa_multiflora	Rmu_sc0002792.1_g000034 Rmu_sc0004670.1_g000014 Rmu_ssc0000438.1_g000039
rosa_roxburghii	Rroxscaffold_2G00110000
rosa_rugosa	Rorug02G0318500 Rorug02G0318600 Rorug06G0124200
rosa_samantha	Rh2AG374800 Rh2BG376400 Rh2CG355000 Rh6AG233000 Rh6DG231400
rosa_wichuraiana	Rw2G030210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	47
AccB7I	CCANNNNNTGG	2 cut(s)	740, 755
AccII	CGCG	2 cut(s)	90, 601
AciI	CCGC	2 cut(s)	88, 601
AclI	AACGTT	1 cut(s)	656
AclWI	GGATC	1 cut(s)	958
AcoI	YGGCCR	1 cut(s)	731
AcsI	RAATTY	3 cut(s)	544, 663, 675
AdeI	CACNNNGTG	2 cut(s)	232, 1008
AfaI	GTAC	2 cut(s)	346, 643
AfiI	CCNNNNNNNGG	5 cut(s)	137, 633, 634, 740, 755
AflIII	ACRYGT	2 cut(s)	410, 574
AgeI	ACCGGT	1 cut(s)	551
AgsI	TTSAA	3 cut(s)	448, 652, 910
AjnI	CCWGG	2 cut(s)	42, 105
AjuI	GAANNNNNNNTTGG	2 cut(s)	12, 44
AloI	GAACNNNNNNTCC	2 cut(s)	960, 992
AluBI	AGCT	6 cut(s)	218, 451, 671, 797, 926, 971
AluI	AGCT	6 cut(s)	218, 451, 671, 797, 926, 971
Alw26I	GTCTC	4 cut(s)	269, 592, 767, 984
AlwI	GGATC	1 cut(s)	958
AoxI	GGCC	5 cut(s)	210, 249, 731, 813, 916
ApeKI	GCWGC	3 cut(s)	451, 779, 971
ApoI	RAATTY	3 cut(s)	544, 663, 675
AsiGI	ACCGGT	1 cut(s)	551
AspLEI	GCGC	2 cut(s)	92, 202
AspS9I	GGNCC	2 cut(s)	99, 917
AsuC2I	CCSGG	3 cut(s)	131, 139, 385
AsuHPI	GGTGA	3 cut(s)	493, 779, 872
AvaII	GGWCC	1 cut(s)	99
BaeGI	GKGCMC	2 cut(s)	50, 228
BalI	TGGCCA	1 cut(s)	733
BanI	GGYRCC	1 cut(s)	47
BanII	GRGCYC	1 cut(s)	246
BbvI	GCAGC	3 cut(s)	438, 791, 958
BccI	CCATC	4 cut(s)	154, 215, 328, 723
BcgI	CGANNNNNNTGC	2 cut(s)	137, 171
BciT130I	CCWGG	2 cut(s)	44, 107
BclI	TGATCA	1 cut(s)	769
BcnI	CCSGG	3 cut(s)	131, 139, 385
BcoDI	GTCTC	4 cut(s)	269, 592, 767, 984
BfaI	CTAG	1 cut(s)	944
BfmI	CTRYAG	2 cut(s)	522, 972
BfoI	RGCGCY	1 cut(s)	203
BisI	GCNGC	3 cut(s)	452, 780, 972
BlsI	GCNGC	3 cut(s)	453, 781, 973
Bme1390I	CCNGG	5 cut(s)	44, 107, 131, 139, 385
Bme18I	GGWCC	1 cut(s)	99
BmgT120I	GGNCC	2 cut(s)	99, 917
BmiI	GGNNCC	3 cut(s)	49, 100, 101
BmrFI	CCNGG	5 cut(s)	44, 107, 131, 139, 385
BmsI	GCATC	3 cut(s)	145, 496, 605
BpmI	CTGGAG	3 cut(s)	310, 762, 987
BpuEI	CTTGAG	3 cut(s)	230, 605, 650
BpuMI	CCSGG	3 cut(s)	131, 139, 385
Bsa29I	ATCGAT	2 cut(s)	953, 998
BsaJI	CCNNGG	2 cut(s)	43, 384
BsaWI	WCCGGW	1 cut(s)	551
BsaXI	ACNNNNNCTCC	2 cut(s)	960, 990
Bsc4I	CCNNNNNNNGG	5 cut(s)	137, 633, 634, 740, 755
Bse118I	RCCGGY	1 cut(s)	551
Bse1I	ACTGG	4 cut(s)	307, 348, 745, 862
Bse3DI	GCAATG	1 cut(s)	789
BseBI	CCWGG	2 cut(s)	44, 107
BseCI	ATCGAT	2 cut(s)	953, 998
BseDI	CCNNGG	2 cut(s)	43, 384
BseGI	GGATG	7 cut(s)	311, 339, 343, 511, 734, 764, 843
BseLI	CCNNNNNNNGG	5 cut(s)	137, 633, 634, 740, 755
BseMI	GCAATG	1 cut(s)	789
BseMII	CTCAG	2 cut(s)	134, 693
BseNI	ACTGG	4 cut(s)	307, 348, 745, 862
BseRI	GAGGAG	1 cut(s)	822
BseSI	GKGCMC	2 cut(s)	50, 228
BseXI	GCAGC	3 cut(s)	438, 791, 958
Bsh1236I	CGCG	2 cut(s)	90, 601
Bsh1285I	CGRYCG	1 cut(s)	79
BshFI	GGCC	5 cut(s)	212, 251, 733, 815, 918
BshNI	GGYRCC	1 cut(s)	47
BshTI	ACCGGT	1 cut(s)	551
BshVI	ATCGAT	2 cut(s)	953, 998
BsiEI	CGRYCG	1 cut(s)	79
BsiSI	CCGG	4 cut(s)	131, 138, 384, 552
BslFI	GGGAC	3 cut(s)	85, 731, 844
BslI	CCNNNNNNNGG	5 cut(s)	137, 633, 634, 740, 755
BsmAI	GTCTC	4 cut(s)	269, 592, 767, 984
BsmFI	GGGAC	3 cut(s)	85, 731, 844
BsmI	GAATGC	1 cut(s)	905
BsnI	GGCC	5 cut(s)	212, 251, 733, 815, 918
Bsp1286I	GDGCHC	3 cut(s)	50, 228, 246
Bsp143I	GATC	5 cut(s)	769, 950, 995, 999, 1012
BspACI	CCGC	2 cut(s)	88, 601
BspANI	GGCC	5 cut(s)	212, 251, 733, 815, 918
BspCNI	CTCAG	2 cut(s)	133, 694
BspDI	ATCGAT	2 cut(s)	953, 998
BspFNI	CGCG	2 cut(s)	90, 601
BspLI	GGNNCC	3 cut(s)	49, 100, 101
BspMAI	CTGCAG	1 cut(s)	976
BspPI	GGATC	1 cut(s)	958
BspT107I	GGYRCC	1 cut(s)	47
BsrDI	GCAATG	1 cut(s)	789
BsrFI	RCCGGY	1 cut(s)	551
BsrI	ACTGG	4 cut(s)	307, 348, 745, 862
BssAI	RCCGGY	1 cut(s)	551
BssECI	CCNNGG	2 cut(s)	43, 384
BssMI	GATC	5 cut(s)	769, 950, 995, 999, 1012
Bst2UI	CCWGG	2 cut(s)	44, 107
Bst4CI	ACNGT	2 cut(s)	80, 1008
Bst6I	CTCTTC	1 cut(s)	858
BstC8I	GCNNGC	3 cut(s)	88, 795, 799
BstDEI	CTNAG	4 cut(s)	120, 702, 893, 986
BstF5I	GGATG	7 cut(s)	311, 339, 343, 511, 734, 764, 843
BstFNI	CGCG	2 cut(s)	90, 601
BstH2I	RGCGCY	1 cut(s)	203
BstHHI	GCGC	2 cut(s)	92, 202
BstKTI	GATC	5 cut(s)	772, 953, 998, 1002, 1015
BstMAI	GTCTC	4 cut(s)	269, 592, 767, 984
BstMBI	GATC	5 cut(s)	769, 950, 995, 999, 1012
BstMCI	CGRYCG	1 cut(s)	79
BstMWI	GCNNNNNNNGC	4 cut(s)	54, 457, 607, 971
BstNI	CCWGG	2 cut(s)	44, 107
BstNSI	RCATGY	3 cut(s)	414, 578, 779
BstSCI	CCNGG	5 cut(s)	42, 105, 129, 137, 383
BstSFI	CTRYAG	2 cut(s)	522, 972
BstSLI	GKGCMC	2 cut(s)	50, 228
BstUI	CGCG	2 cut(s)	90, 601
BstV1I	GCAGC	3 cut(s)	438, 791, 958
Bsu15I	ATCGAT	2 cut(s)	953, 998
BsuRI	GGCC	5 cut(s)	212, 251, 733, 815, 918
BsuTUI	ATCGAT	2 cut(s)	953, 998
BtgZI	GCGATG	2 cut(s)	173, 582
BtsCI	GGATG	7 cut(s)	311, 339, 343, 511, 734, 764, 843
BtsIMutI	CAGTG	6 cut(s)	300, 445, 579, 855, 986, 1013
Cac8I	GCNNGC	3 cut(s)	88, 795, 799
CfoI	GCGC	2 cut(s)	92, 202
Cfr10I	RCCGGY	1 cut(s)	551
Cfr13I	GGNCC	2 cut(s)	99, 917
ClaI	ATCGAT	2 cut(s)	953, 998
CsiI	ACCWGGT	1 cut(s)	105
Csp6I	GTAC	2 cut(s)	345, 642
CspAI	ACCGGT	1 cut(s)	551
CviAII	CATG	6 cut(s)	152, 190, 411, 575, 776, 884
CviQI	GTAC	2 cut(s)	345, 642
DdeI	CTNAG	4 cut(s)	120, 702, 893, 986
DpnI	GATC	5 cut(s)	771, 952, 997, 1001, 1014
DpnII	GATC	5 cut(s)	769, 950, 995, 999, 1012
DraIII	CACNNNGTG	2 cut(s)	232, 1008
EaeI	YGGCCR	1 cut(s)	731
Eam1104I	CTCTTC	1 cut(s)	858
EarI	CTCTTC	1 cut(s)	858
Eco24I	GRGCYC	1 cut(s)	246
Eco47I	GGWCC	1 cut(s)	99
EcoO109I	RGGNCCY	1 cut(s)	99
EcoRI	GAATTC	1 cut(s)	663
EcoRII	CCWGG	2 cut(s)	42, 105
EcoT22I	ATGCAT	1 cut(s)	598
EcoT38I	GRGCYC	1 cut(s)	246
FaeI	CATG	6 cut(s)	155, 193, 414, 578, 779, 887
FaqI	GGGAC	3 cut(s)	85, 731, 844
FatI	CATG	6 cut(s)	151, 189, 410, 574, 775, 883
FauI	CCCGC	1 cut(s)	95
FbaI	TGATCA	1 cut(s)	769
Fnu4HI	GCNGC	3 cut(s)	452, 780, 972
FokI	GGATG	7 cut(s)	318, 346, 350, 518, 741, 771, 830
FriOI	GRGCYC	1 cut(s)	246
Fsp4HI	GCNGC	3 cut(s)	452, 780, 972
FspBI	CTAG	1 cut(s)	944
GlaI	GCGC	2 cut(s)	91, 201
GluI	GCNGC	3 cut(s)	452, 780, 972
GsuI	CTGGAG	3 cut(s)	310, 762, 987
HaeII	RGCGCY	1 cut(s)	203
HaeIII	GGCC	5 cut(s)	212, 251, 733, 815, 918
HapII	CCGG	4 cut(s)	131, 138, 384, 552
HhaI	GCGC	2 cut(s)	92, 202
Hin1II	CATG	6 cut(s)	155, 193, 414, 578, 779, 887
Hin6I	GCGC	2 cut(s)	90, 200
HinP1I	GCGC	2 cut(s)	90, 200
HincII	GTYRAC	2 cut(s)	261, 879
HindII	GTYRAC	2 cut(s)	261, 879
HindIII	AAGCTT	1 cut(s)	795
HinfI	GANTC	3 cut(s)	63, 616, 744
HpaII	CCGG	4 cut(s)	131, 138, 384, 552
HphI	GGTGA	3 cut(s)	493, 779, 872
Hpy166II	GTNNAC	4 cut(s)	117, 235, 261, 879
Hpy188I	TCNGA	3 cut(s)	270, 703, 930
Hpy188III	TCNNGA	5 cut(s)	289, 541, 622, 756, 944
Hpy8I	GTNNAC	4 cut(s)	117, 235, 261, 879
HpyAV	CCTTC	2 cut(s)	190, 857
HpyCH4III	ACNGT	2 cut(s)	80, 1008
HpyCH4IV	ACGT	2 cut(s)	231, 656
HpyCH4V	TGCA	8 cut(s)	189, 360, 443, 496, 596, 779, 801, 974
HpyF10VI	GCNNNNNNNGC	4 cut(s)	54, 457, 607, 971
HpyF3I	CTNAG	4 cut(s)	120, 702, 893, 986
HpySE526I	ACGT	2 cut(s)	231, 656
Hsp92II	CATG	6 cut(s)	155, 193, 414, 578, 779, 887
HspAI	GCGC	2 cut(s)	90, 200
KflI	GGGWCCC	1 cut(s)	99
Ksp22I	TGATCA	1 cut(s)	769
Kzo9I	GATC	5 cut(s)	769, 950, 995, 999, 1012
LmnI	GCTCC	3 cut(s)	291, 931, 968
Lsp1109I	GCAGC	3 cut(s)	438, 791, 958
LweI	GCATC	3 cut(s)	145, 496, 605
MabI	ACCWGGT	1 cut(s)	105
MaeI	CTAG	1 cut(s)	944
MaeII	ACGT	2 cut(s)	231, 656
MaeIII	GTNAC	2 cut(s)	577, 695
MalI	GATC	5 cut(s)	771, 952, 997, 1001, 1014
MboI	GATC	5 cut(s)	769, 950, 995, 999, 1012
MboII	GAAGA	2 cut(s)	402, 875
MhlI	GDGCHC	3 cut(s)	50, 228, 246
MlsI	TGGCCA	1 cut(s)	733
MluNI	TGGCCA	1 cut(s)	733
MlyI	GAGTC	1 cut(s)	753
MmeI	TCCRAC	2 cut(s)	444, 953
MnlI	CCTC	7 cut(s)	321, 481, 560, 697, 800, 805, 940
Mox20I	TGGCCA	1 cut(s)	733
Mph1103I	ATGCAT	1 cut(s)	598
MscI	TGGCCA	1 cut(s)	733
MseI	TTAA	4 cut(s)	536, 548, 720, 1018
Msp20I	TGGCCA	1 cut(s)	733
MspA1I	CMGCKG	1 cut(s)	218
MspI	CCGG	4 cut(s)	131, 138, 384, 552
MspR9I	CCNGG	5 cut(s)	44, 107, 131, 139, 385
Mva1269I	GAATGC	1 cut(s)	905
MvaI	CCWGG	2 cut(s)	44, 107
MvnI	CGCG	2 cut(s)	90, 601
MwoI	GCNNNNNNNGC	4 cut(s)	54, 457, 607, 971
NciI	CCSGG	3 cut(s)	131, 139, 385
NdeII	GATC	5 cut(s)	769, 950, 995, 999, 1012
NlaIII	CATG	6 cut(s)	155, 193, 414, 578, 779, 887
NlaIV	GGNNCC	3 cut(s)	49, 100, 101
NmuCI	GTSAC	1 cut(s)	577
NsiI	ATGCAT	1 cut(s)	598
NspI	RCATGY	3 cut(s)	414, 578, 779
PciI	ACATGT	2 cut(s)	410, 574
PctI	GAATGC	1 cut(s)	905
PfeI	GAWTC	2 cut(s)	63, 616
PflMI	CCANNNNNTGG	2 cut(s)	740, 755
PinAI	ACCGGT	1 cut(s)	551
PkrI	GCNGC	3 cut(s)	453, 781, 973
PleI	GAGTC	1 cut(s)	752
PpsI	GAGTC	1 cut(s)	752
PpuMI	RGGWCCY	1 cut(s)	99
PscI	ACATGT	2 cut(s)	410, 574
Psp1406I	AACGTT	1 cut(s)	656
Psp5II	RGGWCCY	1 cut(s)	99
Psp6I	CCWGG	2 cut(s)	42, 105
PspGI	CCWGG	2 cut(s)	42, 105
PspN4I	GGNNCC	3 cut(s)	49, 100, 101
PspPI	GGNCC	2 cut(s)	99, 917
PspPPI	RGGWCCY	1 cut(s)	99
PstI	CTGCAG	1 cut(s)	976
PvuII	CAGCTG	1 cut(s)	218
RsaI	GTAC	2 cut(s)	346, 643
RsaNI	GTAC	2 cut(s)	345, 642
SaqAI	TTAA	4 cut(s)	536, 548, 720, 1018
SatI	GCNGC	3 cut(s)	452, 780, 972
Sau3AI	GATC	5 cut(s)	769, 950, 995, 999, 1012
Sau96I	GGNCC	2 cut(s)	99, 917
SchI	GAGTC	1 cut(s)	753
ScrFI	CCNGG	5 cut(s)	44, 107, 131, 139, 385
SduI	GDGCHC	3 cut(s)	50, 228, 246
SexAI	ACCWGGT	1 cut(s)	105
SfaNI	GCATC	3 cut(s)	145, 496, 605
SfcI	CTRYAG	2 cut(s)	522, 972
SinI	GGWCC	1 cut(s)	99
SmlI	CTYRAG	3 cut(s)	245, 620, 629
SmoI	CTYRAG	3 cut(s)	245, 620, 629
SsiI	CCGC	2 cut(s)	88, 601
SspMI	CTAG	1 cut(s)	944
StyD4I	CCNGG	5 cut(s)	42, 105, 129, 137, 383
TaaI	ACNGT	2 cut(s)	80, 1008
TaiI	ACGT	2 cut(s)	234, 659
TaqI	TCGA	6 cut(s)	5, 35, 111, 147, 953, 998
TfiI	GAWTC	2 cut(s)	63, 616
Tru1I	TTAA	4 cut(s)	536, 548, 720, 1018
Tru9I	TTAA	4 cut(s)	536, 548, 720, 1018
TscAI	CASTG	6 cut(s)	307, 445, 586, 862, 986, 1013
TseFI	GTSAC	1 cut(s)	577
TseI	GCWGC	3 cut(s)	451, 779, 971
Tsp45I	GTSAC	1 cut(s)	577
TspDTI	ATGAA	4 cut(s)	33, 55, 629, 832
TspGWI	ACGGA	1 cut(s)	332
TspRI	CASTG	6 cut(s)	307, 445, 586, 862, 986, 1013
Van91I	CCANNNNNTGG	2 cut(s)	740, 755
VpaK11BI	GGWCC	1 cut(s)	99
XapI	RAATTY	3 cut(s)	544, 663, 675
XbaI	TCTAGA	1 cut(s)	943
XceI	RCATGY	3 cut(s)	414, 578, 779
XspI	CTAG	1 cut(s)	944
Zsp2I	ATGCAT	1 cut(s)	598

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.