Rh2BG376400

glycerol

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
Physical Location & Seq
Reverse (-)
53188644 .. 53192603
3960 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG376400.1

Sequence Viewer

Length: 1371 bp
ATGTCTAAGCAAGCAGAGGAGGAAGTGTATATTGGGTCAATTGACCAAGGAACCACCAGCACCAGATTCATTATCTATGATCATTTGGCCCGCCCAGTTGGGTCTCACCAGGTCGAGTTCACTCAGGTCTACCCAGAAGCAGGATGGGTGGAGCATGATCCAATGGAGATATTGGAGAGCGTGAGAGTTTGCATGGCTAAGGCTCTGGACAAGGCCACCGCCGATGGGCACAACGTCGACAGTGGATTGAAGGCGATTGGGTTGACCAATCAGAGAGAGACCACTCTCGTTTGGAGTAAATCCACTGGCTGCCCTCTTTACAATGCTATTGTTTGGATGGATGCCCGTACCAGTTCTGTTTGCAGAAAATTGGAGAAAGAATTATCTGGGGGCAGAACTCATTTTTCAGAGATATGTGGTTTGCCCATAAGCACCTATTTCAGTGCTATGAAGCTGCTATGGTTGATGGAGAATGTCGATACTGTTAAGGAGGCTATTAAATCAGGGGATGCTCTGTTTGGAACTATAGACACTTGGTTAATCTGGAACTTAACCGGTGGTCTCAAGGGAGGGGTACATGTCACGGATGTCTCCAACGCGTCACGCACTATGCTCATGAATCTTAAGACTCTTGAGTGGGATCAACCCACCTTGGATACCTTGGGAATTTCCGCTACAATTCTCCCCAAAATTGTCAGCAACTCTGAGGTCATTGGAAATATTGCCATTGGATGGCCAATTACTGGGATCCCAATTTCTGGATGTTTAGGTGATCAACATGCAGCCATGTTAGGTCAGGCTTGCAGGAAAGGTGAGGCCAAGAGCACTTATGGAACTGGTGCTTTTATTCTTCTGAACACTGGTGAAGAGATAACTCTGTCGAAGCACGGGCTTCTAAGCACTTTGTCATTCAAACTTGGACCTAAAGCTCCTGTAAATTATGCTCTAGAAGGATCCATTGCTATTGCTGGAGCTGCAGTTCAGTGGCTTAGGGACGGTCTTGGGATTATTAAGAGTGCAAGTGAGATTGAGGCATTGGCATCACAGGTTGAATCTACTGGTGGAATTTATTTTGTGCCTGCCTTTAACGGATTATTTGCTCCCTGGTGGCGTGATGATGCTCGTGGAGTTTGTATTGGTATGACAAGGTTTACAAACAAGGCTCACCTTGCTCGAGCGGTGCTCGAGAGTATGTGTTTCCAGGTGAAAGATGTGCTAGATTCAATGCACAAAGATGCTGGAGAGAAGGGAGAGGTTAAGAATGAGAAGGGAGAGTTCTTGCTCAGAGTGGATGGTGGCGCTACTGTTAATAACCTTCTAATGCAGATCCAGGTTTGGACTTTGTTTGTACTGTCAAATTTGCCAATTTAA

Protein Analysis

456

Amino Acids

49.5

Weight (kDa)

5.64

Isoelectric Point (pI)

24.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FGGY_N PF00370 10 - 265 1.8e-70 FGGY family of carbohydrate kinases, N-terminal domain
FGGY_C PF02782 274 - 444 4.7e-31 FGGY family of carbohydrate kinases, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 3 cut(s) 732, 743, 758
AccBSI CCGCTC 1 cut(s) 1178
AccI GTMKAC 2 cut(s) 129, 237
AccII CGCG 1 cut(s) 599
AciI CCGC 4 cut(s) 91, 219, 672, 1178
AclWI GGATC 7 cut(s) 152, 648, 742, 755, 948, 961, 1321
AcoI YGGCCR 1 cut(s) 734
AcsI RAATTY 3 cut(s) 666, 1065, 1357
AfaI GTAC 3 cut(s) 349, 576, 1350
AfiI CCNNNNNNNGG 5 cut(s) 140, 225, 732, 743, 758
AflII CTTAAG 1 cut(s) 623
AflIII ACRYGT 2 cut(s) 577, 597
AgeI ACCGGT 1 cut(s) 554
AgsI TTSAA 4 cut(s) 250, 913, 1052, 1224
AjnI CCWGG 4 cut(s) 108, 1103, 1200, 1329
AjuI GAANNNNNNNTTGG 2 cut(s) 15, 47
AloI GAACNNNNNNTCC 2 cut(s) 963, 995
AluBI AGCT 3 cut(s) 454, 929, 974
AluI AGCT 3 cut(s) 454, 929, 974
Alw21I GWGCWC 2 cut(s) 827, 1185
Alw26I GTCTC 4 cut(s) 108, 272, 566, 595
AlwI GGATC 7 cut(s) 152, 648, 742, 755, 948, 961, 1321
Ama87I CYCGRG 2 cut(s) 1173, 1184
AoxI GGCC 4 cut(s) 87, 213, 734, 816
ApeKI GCWGC 4 cut(s) 309, 454, 782, 974
ApoI RAATTY 3 cut(s) 666, 1065, 1357
AsiGI ACCGGT 1 cut(s) 554
AspLEI GCGC 1 cut(s) 1301
AspS9I GGNCC 2 cut(s) 88, 920
AsuHPI GGTGA 6 cut(s) 98, 782, 824, 875, 1157, 1216
AvaI CYCGRG 2 cut(s) 1173, 1184
AvaII GGWCC 1 cut(s) 920
BaeGI GKGCMC 1 cut(s) 231
BalI TGGCCA 1 cut(s) 736
BamHI GGATCC 2 cut(s) 747, 953
BauI CACGAG 1 cut(s) 1122
Bbv12I GWGCWC 2 cut(s) 827, 1185
BbvI GCAGC 4 cut(s) 296, 441, 794, 961
BccI CCATC 6 cut(s) 138, 218, 331, 460, 726, 1286
BciT130I CCWGG 4 cut(s) 110, 1105, 1202, 1331
BciVI GTATCC 1 cut(s) 649
BclI TGATCA 2 cut(s) 79, 772
BcoDI GTCTC 4 cut(s) 108, 272, 566, 595
BfaI CTAG 2 cut(s) 947, 1217
BfmI CTRYAG 2 cut(s) 525, 975
BfoI RGCGCY 1 cut(s) 1302
BfrI CTTAAG 1 cut(s) 623
BfuI GTATCC 1 cut(s) 649
BisI GCNGC 4 cut(s) 310, 455, 783, 975
BlsI GCNGC 4 cut(s) 311, 456, 784, 976
Bme1390I CCNGG 4 cut(s) 110, 1105, 1202, 1331
Bme18I GGWCC 1 cut(s) 920
BmeT110I CYCGRG 2 cut(s) 1173, 1184
BmgT120I GGNCC 2 cut(s) 88, 920
BmiI GGNNCC 3 cut(s) 52, 749, 955
BmrFI CCNGG 4 cut(s) 110, 1105, 1202, 1331
BmrI ACTGGG 2 cut(s) 89, 753
BmsI GCATC 5 cut(s) 331, 499, 1049, 1108, 1225
BmuI ACTGGG 2 cut(s) 89, 753
BplI GAGNNNNNCTC 2 cut(s) 1167, 1199
BpmI CTGGAG 2 cut(s) 990, 1260
Bpu10I CCTNAGC 2 cut(s) 198, 989
BpuEI CTTGAG 2 cut(s) 548, 653
BsaI GGTCTC 3 cut(s) 108, 272, 566
BsaJI CCNNGG 4 cut(s) 46, 651, 660, 1103
BsaWI WCCGGW 1 cut(s) 554
BsaXI ACNNNNNCTCC 4 cut(s) 11, 41, 963, 993
Bsc4I CCNNNNNNNGG 5 cut(s) 140, 225, 732, 743, 758
Bse118I RCCGGY 1 cut(s) 554
Bse1I ACTGG 7 cut(s) 95, 310, 351, 748, 841, 865, 1063
Bse3DI GCAATG 1 cut(s) 957
BseBI CCWGG 4 cut(s) 110, 1105, 1202, 1331
BseDI CCNNGG 4 cut(s) 46, 651, 660, 1103
BseGI GGATG 8 cut(s) 149, 342, 346, 514, 592, 737, 767, 1297
BseLI CCNNNNNNNGG 5 cut(s) 140, 225, 732, 743, 758
BseMI GCAATG 1 cut(s) 957
BseMII CTCAG 3 cut(s) 137, 696, 1297
BseNI ACTGG 7 cut(s) 95, 310, 351, 748, 841, 865, 1063
BseRI GAGGAG 1 cut(s) 32
BseSI GKGCMC 1 cut(s) 231
BseXI GCAGC 4 cut(s) 296, 441, 794, 961
Bsh1236I CGCG 1 cut(s) 599
BshFI GGCC 4 cut(s) 89, 215, 736, 818
BshTI ACCGGT 1 cut(s) 554
BsiHKAI GWGCWC 2 cut(s) 827, 1185
BsiHKCI CYCGRG 2 cut(s) 1173, 1184
BsiSI CCGG 1 cut(s) 555
BslFI GGGAC 1 cut(s) 1007
BslI CCNNNNNNNGG 5 cut(s) 140, 225, 732, 743, 758
BsmAI GTCTC 4 cut(s) 108, 272, 566, 595
BsmFI GGGAC 1 cut(s) 1007
BsnI GGCC 4 cut(s) 89, 215, 736, 818
Bso31I GGTCTC 3 cut(s) 108, 272, 566
BsoBI CYCGRG 2 cut(s) 1173, 1184
Bsp1286I GDGCHC 3 cut(s) 231, 827, 1185
Bsp143I GATC 7 cut(s) 79, 157, 640, 747, 772, 953, 1326
BspACI CCGC 4 cut(s) 91, 219, 672, 1178
BspANI GGCC 4 cut(s) 89, 215, 736, 818
BspCNI CTCAG 3 cut(s) 136, 697, 1296
BspFNI CGCG 1 cut(s) 599
BspHI TCATGA 1 cut(s) 615
BspLI GGNNCC 3 cut(s) 52, 749, 955
BspMAI CTGCAG 1 cut(s) 979
BspPI GGATC 7 cut(s) 152, 648, 742, 755, 948, 961, 1321
BspTI CTTAAG 1 cut(s) 623
BspTNI GGTCTC 3 cut(s) 108, 272, 566
BsrBI CCGCTC 1 cut(s) 1178
BsrDI GCAATG 1 cut(s) 957
BsrFI RCCGGY 1 cut(s) 554
BsrI ACTGG 7 cut(s) 95, 310, 351, 748, 841, 865, 1063
BssAI RCCGGY 1 cut(s) 554
BssECI CCNNGG 4 cut(s) 46, 651, 660, 1103
BssMI GATC 7 cut(s) 79, 157, 640, 747, 772, 953, 1326
BssSI CACGAG 1 cut(s) 1122
BssT1I CCWWGG 3 cut(s) 46, 651, 660
Bst2BI CACGAG 1 cut(s) 1122
Bst2UI CCWGG 4 cut(s) 110, 1105, 1202, 1331
Bst4CI ACNGT 5 cut(s) 242, 484, 998, 1306, 1353
Bst6I CTCTTC 1 cut(s) 861
BstAFI CTTAAG 1 cut(s) 623
BstC8I GCNNGC 4 cut(s) 12, 91, 802, 1080
BstDEI CTNAG 7 cut(s) 6, 123, 198, 705, 896, 989, 1283
BstF5I GGATG 8 cut(s) 149, 342, 346, 514, 592, 737, 767, 1297
BstFNI CGCG 1 cut(s) 599
BstH2I RGCGCY 1 cut(s) 1302
BstHHI GCGC 1 cut(s) 1301
BstKTI GATC 7 cut(s) 82, 160, 643, 750, 775, 956, 1329
BstMAI GTCTC 4 cut(s) 108, 272, 566, 595
BstMBI GATC 7 cut(s) 79, 157, 640, 747, 772, 953, 1326
BstMWI GCNNNNNNNGC 2 cut(s) 974, 1169
BstNI CCWGG 4 cut(s) 110, 1105, 1202, 1331
BstNSI RCATGY 2 cut(s) 581, 782
BstSCI CCNGG 4 cut(s) 108, 1103, 1200, 1329
BstSFI CTRYAG 2 cut(s) 525, 975
BstSLI GKGCMC 1 cut(s) 231
BstUI CGCG 1 cut(s) 599
BstV1I GCAGC 4 cut(s) 296, 441, 794, 961
BstX2I RGATCY 3 cut(s) 747, 953, 1326
BstYI RGATCY 3 cut(s) 747, 953, 1326
BsuI GTATCC 1 cut(s) 649
BsuRI GGCC 4 cut(s) 89, 215, 736, 818
BtsCI GGATG 8 cut(s) 149, 342, 346, 514, 592, 737, 767, 1297
BtsIMutI CAGTG 5 cut(s) 247, 303, 448, 858, 989
Cac8I GCNNGC 4 cut(s) 12, 91, 802, 1080
CciI TCATGA 1 cut(s) 615
CfoI GCGC 1 cut(s) 1301
Cfr10I RCCGGY 1 cut(s) 554
Cfr13I GGNCC 2 cut(s) 88, 920
CseI GACGC 1 cut(s) 588
CsiI ACCWGGT 1 cut(s) 108
Csp6I GTAC 3 cut(s) 348, 575, 1349
CspAI ACCGGT 1 cut(s) 554
CviAII CATG 6 cut(s) 155, 193, 578, 616, 779, 787
CviQI GTAC 3 cut(s) 348, 575, 1349
DdeI CTNAG 7 cut(s) 6, 123, 198, 705, 896, 989, 1283
DpnI GATC 7 cut(s) 81, 159, 642, 749, 774, 955, 1328
DpnII GATC 7 cut(s) 79, 157, 640, 747, 772, 953, 1326
EaeI YGGCCR 1 cut(s) 734
Eam1104I CTCTTC 1 cut(s) 861
EarI CTCTTC 1 cut(s) 861
Eco130I CCWWGG 3 cut(s) 46, 651, 660
Eco31I GGTCTC 3 cut(s) 108, 272, 566
Eco47I GGWCC 1 cut(s) 920
Eco88I CYCGRG 2 cut(s) 1173, 1184
EcoRII CCWGG 4 cut(s) 108, 1103, 1200, 1329
EcoT14I CCWWGG 3 cut(s) 46, 651, 660
ErhI CCWWGG 3 cut(s) 46, 651, 660
FaeI CATG 6 cut(s) 158, 196, 581, 619, 782, 790
FaqI GGGAC 1 cut(s) 1007
FatI CATG 6 cut(s) 154, 192, 577, 615, 778, 786
FauI CCCGC 1 cut(s) 98
FbaI TGATCA 2 cut(s) 79, 772
FblI GTMKAC 2 cut(s) 129, 237
Fnu4HI GCNGC 4 cut(s) 310, 455, 783, 975
FokI GGATG 8 cut(s) 156, 349, 353, 521, 599, 744, 774, 1304
Fsp4HI GCNGC 4 cut(s) 310, 455, 783, 975
FspBI CTAG 2 cut(s) 947, 1217
GlaI GCGC 1 cut(s) 1300
GluI GCNGC 4 cut(s) 310, 455, 783, 975
GsuI CTGGAG 2 cut(s) 990, 1260
HaeII RGCGCY 1 cut(s) 1302
HaeIII GGCC 4 cut(s) 89, 215, 736, 818
HapII CCGG 1 cut(s) 555
HgaI GACGC 1 cut(s) 588
HhaI GCGC 1 cut(s) 1301
Hin1II CATG 6 cut(s) 158, 196, 581, 619, 782, 790
Hin6I GCGC 1 cut(s) 1299
HinP1I GCGC 1 cut(s) 1299
HincII GTYRAC 2 cut(s) 238, 264
HindII GTYRAC 2 cut(s) 238, 264
HinfI GANTC 5 cut(s) 66, 619, 628, 1052, 1220
HpaII CCGG 1 cut(s) 555
HphI GGTGA 6 cut(s) 98, 782, 824, 875, 1157, 1216
Hpy166II GTNNAC 5 cut(s) 120, 130, 238, 264, 1152
Hpy188I TCNGA 5 cut(s) 273, 409, 706, 855, 1286
Hpy188III TCNNGA 7 cut(s) 206, 544, 616, 632, 759, 947, 1186
Hpy8I GTNNAC 5 cut(s) 120, 130, 238, 264, 1152
Hpy99I CGWCG 1 cut(s) 239
HpyAV CCTTC 5 cut(s) 244, 944, 1240, 1261, 1325
HpyCH4III ACNGT 5 cut(s) 242, 484, 998, 1306, 1353
HpyCH4IV ACGT 1 cut(s) 234
HpyCH4V TGCA 8 cut(s) 192, 363, 782, 804, 977, 1019, 1228, 1324
HpyF10VI GCNNNNNNNGC 2 cut(s) 974, 1169
HpyF3I CTNAG 7 cut(s) 6, 123, 198, 705, 896, 989, 1283
HpySE526I ACGT 1 cut(s) 234
Hsp92II CATG 6 cut(s) 158, 196, 581, 619, 782, 790
HspAI GCGC 1 cut(s) 1299
Ksp22I TGATCA 2 cut(s) 79, 772
Kzo9I GATC 7 cut(s) 79, 157, 640, 747, 772, 953, 1326
LmnI GCTCC 4 cut(s) 151, 934, 971, 1105
Lsp1109I GCAGC 4 cut(s) 296, 441, 794, 961
LweI GCATC 5 cut(s) 331, 499, 1049, 1108, 1225
MabI ACCWGGT 1 cut(s) 108
MaeI CTAG 2 cut(s) 947, 1217
MaeII ACGT 1 cut(s) 234
MaeIII GTNAC 2 cut(s) 580, 600
MalI GATC 7 cut(s) 81, 159, 642, 749, 774, 955, 1328
MbiI CCGCTC 1 cut(s) 1178
MboI GATC 7 cut(s) 79, 157, 640, 747, 772, 953, 1326
MboII GAAGA 2 cut(s) 842, 878
MfeI CAATTG 1 cut(s) 39
MflI RGATCY 3 cut(s) 747, 953, 1326
MhlI GDGCHC 3 cut(s) 231, 827, 1185
MlsI TGGCCA 1 cut(s) 736
MluI ACGCGT 1 cut(s) 597
MluNI TGGCCA 1 cut(s) 736
MlyI GAGTC 1 cut(s) 622
MmeI TCCRAC 1 cut(s) 618
MnlI CCTC 9 cut(s) 10, 13, 324, 484, 563, 700, 808, 1024, 1246
Mox20I TGGCCA 1 cut(s) 736
MscI TGGCCA 1 cut(s) 736
MslI CAYNNNNRTG 1 cut(s) 1233
Msp20I TGGCCA 1 cut(s) 736
MspCI CTTAAG 1 cut(s) 623
MspI CCGG 1 cut(s) 555
MspR9I CCNGG 4 cut(s) 110, 1105, 1202, 1331
MunI CAATTG 1 cut(s) 39
MvaI CCWGG 4 cut(s) 110, 1105, 1202, 1331
MvnI CGCG 1 cut(s) 599
MwoI GCNNNNNNNGC 2 cut(s) 974, 1169
NdeII GATC 7 cut(s) 79, 157, 640, 747, 772, 953, 1326
NlaIII CATG 6 cut(s) 158, 196, 581, 619, 782, 790
NlaIV GGNNCC 3 cut(s) 52, 749, 955
NmuCI GTSAC 2 cut(s) 580, 600
NspI RCATGY 2 cut(s) 581, 782
PaeR7I CTCGAG 2 cut(s) 1173, 1184
PagI TCATGA 1 cut(s) 615
PciI ACATGT 1 cut(s) 577
PfeI GAWTC 4 cut(s) 66, 619, 1052, 1220
PflMI CCANNNNNTGG 3 cut(s) 732, 743, 758
PinAI ACCGGT 1 cut(s) 554
PkrI GCNGC 4 cut(s) 311, 456, 784, 976
PleI GAGTC 1 cut(s) 622
PpsI GAGTC 1 cut(s) 622
PscI ACATGT 1 cut(s) 577
Psp6I CCWGG 4 cut(s) 108, 1103, 1200, 1329
PspGI CCWGG 4 cut(s) 108, 1103, 1200, 1329
PspN4I GGNNCC 3 cut(s) 52, 749, 955
PspPI GGNCC 2 cut(s) 88, 920
PspXI VCTCGAGB 1 cut(s) 1173
PstI CTGCAG 1 cut(s) 979
PsuI RGATCY 3 cut(s) 747, 953, 1326
RsaI GTAC 3 cut(s) 349, 576, 1350
RsaNI GTAC 3 cut(s) 348, 575, 1349
RseI CAYNNNNRTG 1 cut(s) 1233
SalI GTCGAC 1 cut(s) 236
SatI GCNGC 4 cut(s) 310, 455, 783, 975
Sau3AI GATC 7 cut(s) 79, 157, 640, 747, 772, 953, 1326
Sau96I GGNCC 2 cut(s) 88, 920
SchI GAGTC 1 cut(s) 622
ScrFI CCNGG 4 cut(s) 110, 1105, 1202, 1331
SduI GDGCHC 3 cut(s) 231, 827, 1185
SexAI ACCWGGT 1 cut(s) 108
SfaNI GCATC 5 cut(s) 331, 499, 1049, 1108, 1225
SfcI CTRYAG 2 cut(s) 525, 975
Sfr274I CTCGAG 2 cut(s) 1173, 1184
SinI GGWCC 1 cut(s) 920
SlaI CTCGAG 2 cut(s) 1173, 1184
SmiMI CAYNNNNRTG 1 cut(s) 1233
SmlI CTYRAG 5 cut(s) 563, 623, 632, 1173, 1184
SmoI CTYRAG 5 cut(s) 563, 623, 632, 1173, 1184
SsiI CCGC 4 cut(s) 91, 219, 672, 1178
SspI AATATT 1 cut(s) 721
SspMI CTAG 2 cut(s) 947, 1217
StyD4I CCNGG 4 cut(s) 108, 1103, 1200, 1329
StyI CCWWGG 3 cut(s) 46, 651, 660
TaaI ACNGT 5 cut(s) 242, 484, 998, 1306, 1353
TaiI ACGT 1 cut(s) 237
TaqI TCGA 6 cut(s) 114, 237, 477, 881, 1174, 1185
TatI WGTACW 1 cut(s) 1348
TfiI GAWTC 4 cut(s) 66, 619, 1052, 1220
TscAI CASTG 5 cut(s) 247, 310, 448, 865, 989
TseFI GTSAC 2 cut(s) 580, 600
TseI GCWGC 4 cut(s) 309, 454, 782, 974
Tsp45I GTSAC 2 cut(s) 580, 600
TspDTI ATGAA 3 cut(s) 58, 464, 632
TspGWI ACGGA 2 cut(s) 599, 1104
TspRI CASTG 5 cut(s) 247, 310, 448, 865, 989
Van91I CCANNNNNTGG 3 cut(s) 732, 743, 758
Vha464I CTTAAG 1 cut(s) 623
VpaK11BI GGWCC 1 cut(s) 920
XapI RAATTY 3 cut(s) 666, 1065, 1357
XbaI TCTAGA 1 cut(s) 946
XceI RCATGY 2 cut(s) 581, 782
XcmI CCANNNNNNNNNTGG 1 cut(s) 141
XhoI CTCGAG 2 cut(s) 1173, 1184
XmiI GTMKAC 2 cut(s) 129, 237
XspI CTAG 2 cut(s) 947, 1217
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.