Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0005014

Physical Location & Seq

Genomic Coordinates Forward (+)

457002 .. 463408

Gene Structure 6407 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G01980.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3441 bp

ATGACGACTGTAATCGACGCGACGATGGCGTATAGATTTCTGGAGGAAGCGACCGATTCGTCTTCTTCTTCTTCTTCTTCCAAACTAGAATCTAGCCCTGTCGACGCCGTTCTCTTCGTCGGAATGTCTCTGGTACTCGGTATTGCTTCTAGGCACTTGCTTCGTGGAACTAGGGTTCCTTACACTGTCGCTCTTCTCGTTATCGGAATTGCTCTTGGATCTCTCGAATATGGAGCTAAACATAACCTTGGAAAGATCGGCCATGGAATTCGTATCTGGAATGAGATCGATCCAGAACTTCTTTTAGCTGTTTTTCTTCCGGCTCTTCTTTTCGAGAGTTCGTTTTCAATGGAAGTTCACCAAATTAAGAGGTGTCTGGGACAAATGGTGTTACTTGCTGTCCCTGGAGTTCTTATTTCAACAGCTTGTCTTGGATCGCTTGTGAAGGTCACGTTTCCGTATGAATGGGACTGGAAAACGTCCTTGTTGCTTGGGGGACTTTTAAGTGCTACTGATCCGGTTGCTGTTGTTGCTTTGCTAAAGGAGCTTGGTGCTAGTAAGAAGCTAAGCACCATAATTGAAGGGGAATCCCTGATGAATGATGGGACGGCGATTGTTGTTTTCCAGTTATTCTTAAAGATGGCTATGGGGCAAAACTCTGACTGGAGTTCTATAATCAAATTTCTGCTTAAAGTCGCACTTGGAGCTGTAGGCATTGGTCTGGCGTTTGGCATTGCATCAGTTATTTGGCTCAAGTTCATATTCAATGACACTGTAATAGAGATTACTCTTACAATTGCAGTGAGCTATTTCGCATACTACACTGCTCAAGAGTGGGCTGGGGCTTCTGGTGTTTTGACGGTCATGACTTTGGGCATGTTTTATGCTGCATTTGCAAGGACAGCCTTTAAAGGTGACAGTCAAAAAAGCTTGCATCACTTCTGGGAAATGGTTGCATATATTGCAAACACTTTGATATTTATCCTCAGTGGTGTTGTCATTGCTGAAGGCATTCTCGACAGTGATAAGATTGCCTACCAAGGGAATTCATGGCGATTTCTTTTTCTGCTATACGTTTACATCCAACTATCGCGTGTTGTTGTTGTTGGAGTTCTATATCCACTTTTATGTCGTTTTGGCTATGGTTTGGATTGGAAAGAATCCATTATACTCGTATGGTCTGGTTTGAGGGGCGCAGTGGCTCTTGCACTTTCTTTATCCGTGAAGCAATCAAGCGGAAATTCACATATCAGCAAGGAGACTGGAACATTGTTTCTTTTCTTCACGGGTGGAATTGTGTTCCTAACTCTGATAGTTAATGGATCCACTACCCAATTTGTTCTACGCCTTCTTCGCATGGATATTTTACCAGCCCCCAAGAAACGAATATTGGAATATACAAAGTACGAAATGTTGAATAAGGCCTTACGAGCGTTTCAAGATCTAGGAGACGATGAGGAGCTAGGACCTGCTGACTGGCCTACAGTTGAAAGTTATATTTCAAGCCTAAAAGGTTCAGAAGGGGAACTAGTTCATCATCCTCACAATGGCTCTAAAATTGGAAGTCTTGACCCTAAAAGTTTAAAGGACATACGTATGCGGTTCTTAAATGGTGTGCAAGCAACTTACTGGGAGATGCTTGATGAGGGCAGAATATCTGAAGTTACTGCTAATATTTTGATGCAGTCAGTGGATGAGGCGCTTGATCAGGTTTCTACAACTTTATGTGATTGGAGAGGTCTAAAACCACATGTCAATTTCCCAAATTACTACAACTTTCTTCATTCTAAAGTTGTCCCACGCAAGTTGGTCACATACTTTGCTGTCGAAAGACTAGAATCTGCTTGCTACATTTCTGCTGCGTTTCTTCGCGCACATACAATTGCACGACAGCAATTGTATGATTTTCTAGGGGAGAGTAATATTGGTTCCATTGTAATCAATGAAAGTGAAAAGGAAGGAGAGGAAGCAAAAAAGTTCTTGGAAAAAGTCCGATCTTCATTTCCTCAGGTTCTCCGTGTTGTGAAAACAAAACAAGTAACATATTCAGTGTTGAATCATTTACTCGGTTACATTGAAAACCTCGAGAAGGTTGGCTTGTTGGAGGAAAAAGAAATCGCTCATCTTCATGATGCTGTCCAGACCGGCTTGAAAAAGCTTTTGAGAAACCCTCCAATAGTTAAACTTCCAAAATTGAGCGACATGATCACCTCACATCCGTTATCGGTTGCTCTTCCTCCTGCATTTTGTGAACCTTTAAAACACTCGAAAAAAGAACCAATGAAACTGCGTGGTGTCACGCTTTATAAAGAAGGTTCAAAGCCAACTGGAGTCTGGCTTATTTTTGATGGCATCGTTAAGTGGAAAAGTAAGATCTTAAGCAACAATCACTCGCTGCATCCAACTTTTTCTCACGGTAGTACATTGGGACTCTACGAAGTCCTCACTGGGAAGCCATATCTGTGCGACTTGATTACAGATTCTATGGTTCTTTGCTTTTTCATTGATAGCGAGAAAATTCTATCACTACAATCAGATTCTACCATCGATGATTTCCTTTGGCAGGAAAGTGCATTGGTTCTTCTCAAACTCTTGCGTCCTCAGATATTTGAAAGTGTGGCAATGCAAGAATTACGAGCCCTTGTTTCAACTGAAAGCTCGAAACTTACAACATATGTGACGGGAGAATCAATCGAAATCGACTGCAACAGCATTGGTTTATTATTAGAAGGATTCGTAAAACCGGTTGGTATCAAAGAAGAGCTTATATCATCTCCCGCCGCATTATCACCTTCTAACGGGAATCAAAGCTTCCATAATTCATCAGAAGCTTCAGGTATCATGAGAGTCAGTTTCTCACAACAAGCAACACAGTATATTGTTGAGACGAGAGCAAGAGCAATCATCTTCAACATTGGAGCATTTGGAGCTGATAGGACTCTACATCGAAGACCATCTTCGTTAACACCACCACGTAGCTCAAGCTCTGATCAGCTTCAGAGATCATTTCGTAAAGAACACAGAGGTCTCATGAGCTGGCCTGAAAATATTTACGCCAAACAACAACAAGAGATCAATAAAACGACATTAAGTTTATCTGAACGAGCAATGCAACTCAGCATTTTCGGCAGCATGGTTAATGTGTACAGAAGGAGTGTAAGTTTCGGTGGGATCTATAATAACAAGTTACAAGATAACTTGTTGTACAAAAAACTTCCACTAAACCCAGCTCAAGGTCTCGTTTCAGCCAAATCAGAAAGTTCAATTGTGACCAAGAAGCAGCTTGAAACCCGTAAACATGCGTGTCAGCTTCCTCTGAAAGGGGAAAGCAGCACAAGGCAAAATACGATGGTTGAATCAAGCGATGAAGAAGATGAAGATGAAGGAATCGTTGTGAGAATCGATTCTCCGAGTAAAATCGTTTTCAGGAACGATCTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000302 GO:0003674 GO:0005215 GO:0005451 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006813 GO:0006814 GO:0006873 GO:0006885 GO:0006950 GO:0006970 GO:0006979 GO:0008150 GO:0008324 GO:0009507 GO:0009526 GO:0009536 GO:0009628 GO:0009636 GO:0009651 GO:0009941 GO:0009987 GO:0010035 GO:0010351 GO:0010352 GO:0015075 GO:0015077 GO:0015078 GO:0015079 GO:0015081 GO:0015291 GO:0015297 GO:0015298 GO:0015299 GO:0015318 GO:0015385 GO:0015386 GO:0015491 GO:0015672 GO:0016020 GO:0019222 GO:0019725 GO:0022804 GO:0022821 GO:0022857 GO:0022890 GO:0030001 GO:0030003 GO:0030004 GO:0030641 GO:0031323 GO:0031967 GO:0031975 GO:0034220 GO:0035725 GO:0042221 GO:0042493 GO:0042542 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046677 GO:0046873 GO:0048878 GO:0050789 GO:0050794 GO:0050801 GO:0050896 GO:0051179 GO:0051234 GO:0051453 GO:0055067 GO:0055080 GO:0055082 GO:0055085 GO:0065007 GO:0065008 GO:0071804 GO:0071805 GO:0071944 GO:0098655 GO:0098657 GO:0098659 GO:0098660 GO:0098662 GO:0098719 GO:0098739 GO:0098771 GO:0099516 GO:0099587 GO:0140115 GO:1901700 GO:1902600 GO:2000377

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Na_H_Exchanger cNMP_binding

Protein Analysis

1146

Amino Acids

127.19

Weight (kDa)

7.62

Isoelectric Point (pI)

38.6

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Na_H_Exchanger	PF00999	44 - 449	3.9e-77	Sodium/hydrogen exchanger, transmembrane

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0005014)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G14660 AT1G14660 AT2G01980
fragaria_vesca	FvH4_4g35880 FvH4_4g35880 FvH4_4g35880 FvH4_4g35880 FvH4_4g35880 FvH4_4g35890
malus_domestica	MD13G1014200.v1.1 MD16G1011300.v1.1 MD16G1011400.v1.1 MD16G1011500.v1.1
prunus_persica	Prupe.1G339200_v2.0.a1 Prupe.1G339200_v2.0.a1
pyrus_communis	pycom13g01220 pycom13g01230 pycom16g01100 pycom16g01110
rosa_chinensis	RchiOBHm_Chr4g0445491
rosa_laevigata	RLG00000005737
rosa_multiflora	Rmu_sc0001509.1_g000010 Rmu_sc0010466.1_g000001
rosa_roxburghii	Rroxscaffold_5G00385970
rosa_rugosa	Rorug04G0361700
rosa_samantha	Rh4AG423100 Rh4BG435100 Rh4CG450000 Rh4DG431400
rosa_wichuraiana	Rw4G036290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2307
AasI	GACNNNNNNGTC	1 cut(s)	58
Acc36I	ACCTGC	1 cut(s)	1477
AccI	GTMKAC	1 cut(s)	102
AccII	CGCG	3 cut(s)	20, 1093, 1872
AciI	CCGC	4 cut(s)	1236, 1600, 2778, 2781
AclWI	GGATC	7 cut(s)	226, 284, 442, 509, 1317, 1330, 3179
AcoI	YGGCCR	1 cut(s)	259
AcsI	RAATTY	5 cut(s)	267, 680, 1045, 1240, 2517
AcuI	CTGAAG	4 cut(s)	1026, 1680, 2817, 2981
AcyI	GRCGYC	1 cut(s)	105
AfaI	GTAC	5 cut(s)	135, 1406, 2422, 3146, 3206
AfiI	CCNNNNNNNGG	7 cut(s)	1041, 1547, 2089, 2563, 2798, 3233, 3320
AflII	CTTAAG	1 cut(s)	2377
AflIII	ACRYGT	1 cut(s)	1750
AgeI	ACCGGT	1 cut(s)	2743
AhlI	ACTAGT	1 cut(s)	1528
AjnI	CCWGG	1 cut(s)	403
AjuI	GAANNNNNNNTTGG	2 cut(s)	1373, 1405
AloI	GAACNNNNNNTCC	4 cut(s)	159, 160, 191, 192
Alw26I	GTCTC	6 cut(s)	132, 1253, 1443, 2879, 3032, 3242
AlwI	GGATC	7 cut(s)	226, 284, 442, 509, 1317, 1330, 3179
Ama87I	CYCGRG	1 cut(s)	2084
AoxI	GGCC	4 cut(s)	259, 1422, 1478, 3038
ApeKI	GCWGC	6 cut(s)	887, 1859, 2395, 3129, 3280, 3330
ApoI	RAATTY	5 cut(s)	267, 680, 1045, 1240, 2517
AsiGI	ACCGGT	1 cut(s)	2743
Asp700I	GAANNNNTTC	3 cut(s)	1011, 1530, 3403
AspLEI	GCGC	3 cut(s)	1196, 1702, 1874
AspS9I	GGNCC	1 cut(s)	1466
AsuHPI	GGTGA	4 cut(s)	350, 926, 2200, 2781
AvaI	CYCGRG	1 cut(s)	2084
AvaII	GGWCC	1 cut(s)	1466
AxyI	CCTNAGG	1 cut(s)	2007
BamHI	GGATCC	1 cut(s)	1322
BanII	GRGCYC	1 cut(s)	2641
BbsI	GAAGAC	2 cut(s)	54, 2956
BbvI	GCAGC	6 cut(s)	874, 1846, 2382, 3141, 3292, 3342
BccI	CCATC	7 cut(s)	19, 596, 634, 2342, 2552, 2962, 3343
BceAI	ACGGC	2 cut(s)	92, 624
BcgI	CGANNNNNNTGC	2 cut(s)	143, 177
BciT130I	CCWGG	1 cut(s)	405
BclI	TGATCA	3 cut(s)	1705, 2205, 2989
BcoDI	GTCTC	6 cut(s)	132, 1253, 1443, 2879, 3032, 3242
BcuI	ACTAGT	1 cut(s)	1528
BfmI	CTRYAG	2 cut(s)	708, 1482
BfoI	RGCGCY	1 cut(s)	1703
BfrI	CTTAAG	1 cut(s)	2377
BfuAI	ACCTGC	1 cut(s)	1477
BglII	AGATCT	2 cut(s)	1441, 2373
BisI	GCNGC	7 cut(s)	888, 1860, 2396, 2781, 3130, 3281, 3331
BlpI	GCTNAGC	1 cut(s)	566
BlsI	GCNGC	7 cut(s)	889, 1861, 2397, 2782, 3131, 3282, 3332
Bme1390I	CCNGG	1 cut(s)	405
Bme18I	GGWCC	1 cut(s)	1466
BmeT110I	CYCGRG	1 cut(s)	2084
BmgT120I	GGNCC	1 cut(s)	1466
BmiI	GGNNCC	3 cut(s)	177, 1324, 1930
BmrFI	CCNGG	1 cut(s)	405
BmrI	ACTGGG	2 cut(s)	1639, 2457
BmsI	GCATC	7 cut(s)	746, 943, 1626, 1671, 2122, 2361, 2407
BmuI	ACTGGG	2 cut(s)	1639, 2457
BpiI	GAAGAC	2 cut(s)	54, 2956
BplI	GAGNNNNNCTC	2 cut(s)	2155, 2187
BpmI	CTGGAG	4 cut(s)	62, 426, 685, 2349
Bpu1102I	GCTNAGC	1 cut(s)	566
BpuEI	CTTGAG	4 cut(s)	737, 813, 2965, 3216
Bsa29I	ATCGAT	3 cut(s)	288, 2547, 3402
BsaAI	YACGTR	2 cut(s)	1595, 2975
BsaBI	GATNNNNATC	1 cut(s)	980
BsaHI	GRCGYC	1 cut(s)	105
BsaI	GGTCTC	2 cut(s)	3032, 3242
BsaJI	CCNNGG	4 cut(s)	247, 262, 403, 1039
BsaWI	WCCGGW	2 cut(s)	517, 2743
BsaXI	ACNNNNNCTCC	2 cut(s)	3145, 3175
Bsc4I	CCNNNNNNNGG	7 cut(s)	1041, 1547, 2089, 2563, 2798, 3233, 3320
Bse118I	RCCGGY	2 cut(s)	2144, 2743
Bse1I	ACTGG	8 cut(s)	476, 625, 668, 1267, 1481, 1634, 2332, 2452
Bse21I	CCTNAGG	1 cut(s)	2007
Bse3DI	GCAATG	4 cut(s)	732, 999, 2628, 3114
Bse8I	GATNNNNATC	1 cut(s)	980
BseBI	CCWGG	1 cut(s)	405
BseCI	ATCGAT	3 cut(s)	288, 2547, 3402
BseDI	CCNNGG	4 cut(s)	247, 262, 403, 1039
BseGI	GGATG	5 cut(s)	1080, 1537, 1699, 2215, 2398
BseJI	GATNNNNATC	1 cut(s)	980
BseLI	CCNNNNNNNGG	7 cut(s)	1041, 1547, 2089, 2563, 2798, 3233, 3320
BseMI	GCAATG	4 cut(s)	732, 999, 2628, 3114
BseMII	CTCAG	4 cut(s)	1000, 2021, 2615, 3130
BseNI	ACTGG	8 cut(s)	476, 625, 668, 1267, 1481, 1634, 2332, 2452
BseRI	GAGGAG	1 cut(s)	1472
BseXI	GCAGC	6 cut(s)	874, 1846, 2382, 3141, 3292, 3342
BseYI	CCCAGC	2 cut(s)	839, 3226
Bsh1236I	CGCG	3 cut(s)	20, 1093, 1872
Bsh1285I	CGRYCG	1 cut(s)	54
BshFI	GGCC	4 cut(s)	261, 1424, 1480, 3040
BshTI	ACCGGT	1 cut(s)	2743
BshVI	ATCGAT	3 cut(s)	288, 2547, 3402
BsiEI	CGRYCG	1 cut(s)	54
BsiHKCI	CYCGRG	1 cut(s)	2084
BsiSI	CCGG	4 cut(s)	320, 518, 2145, 2744
BslFI	GGGAC	7 cut(s)	386, 393, 482, 510, 619, 1781, 2442
BslI	CCNNNNNNNGG	7 cut(s)	1041, 1547, 2089, 2563, 2798, 3233, 3320
BsmAI	GTCTC	6 cut(s)	132, 1253, 1443, 2879, 3032, 3242
BsmBI	CGTCTC	2 cut(s)	1443, 2879
BsmFI	GGGAC	7 cut(s)	386, 393, 482, 510, 619, 1781, 2442
BsmI	GAATGC	1 cut(s)	1011
BsnI	GGCC	4 cut(s)	261, 1424, 1480, 3040
Bso31I	GGTCTC	2 cut(s)	3032, 3242
BsoBI	CYCGRG	1 cut(s)	2084
Bsp1286I	GDGCHC	1 cut(s)	2641
Bsp1407I	TGTACA	2 cut(s)	3144, 3204
Bsp1720I	GCTNAGC	1 cut(s)	566
Bsp19I	CCATGG	1 cut(s)	262
BspACI	CCGC	4 cut(s)	1236, 1600, 2778, 2781
BspANI	GGCC	4 cut(s)	261, 1424, 1480, 3040
BspCNI	CTCAG	4 cut(s)	999, 2020, 2614, 3129
BspDI	ATCGAT	3 cut(s)	288, 2547, 3402
BspFNI	CGCG	3 cut(s)	20, 1093, 1872
BspHI	TCATGA	4 cut(s)	864, 2128, 2841, 3030
BspLI	GGNNCC	3 cut(s)	177, 1324, 1930
BspMI	ACCTGC	1 cut(s)	1477
BspPI	GGATC	7 cut(s)	226, 284, 442, 509, 1317, 1330, 3179
BspQI	GCTCTTC	4 cut(s)	198, 330, 2238, 2754
BspTI	CTTAAG	1 cut(s)	2377
BspTNI	GGTCTC	2 cut(s)	3032, 3242
BsrDI	GCAATG	4 cut(s)	732, 999, 2628, 3114
BsrFI	RCCGGY	2 cut(s)	2144, 2743
BsrGI	TGTACA	2 cut(s)	3144, 3204
BsrI	ACTGG	8 cut(s)	476, 625, 668, 1267, 1481, 1634, 2332, 2452
BssAI	RCCGGY	2 cut(s)	2144, 2743
BssECI	CCNNGG	4 cut(s)	247, 262, 403, 1039
BssNI	GRCGYC	1 cut(s)	105
BssT1I	CCWWGG	3 cut(s)	247, 262, 1039
Bst2UI	CCWGG	1 cut(s)	405
Bst4CI	ACNGT	9 cut(s)	10, 187, 775, 862, 920, 1022, 1486, 2417, 2874
Bst6I	CTCTTC	5 cut(s)	119, 198, 330, 2238, 2754
BstACI	GRCGYC	1 cut(s)	105
BstAFI	CTTAAG	1 cut(s)	2377
BstAPI	GCANNNNNTGC	1 cut(s)	962
BstAUI	TGTACA	2 cut(s)	3144, 3204
BstBAI	YACGTR	2 cut(s)	1595, 2975
BstC8I	GCNNGC	4 cut(s)	932, 1620, 1846, 3038
BstDEI	CTNAG	5 cut(s)	566, 986, 2007, 2601, 3116
BstDSI	CCRYGG	1 cut(s)	262
BstENI	CCTNNNNNAGG	3 cut(s)	2087, 2561, 3318
BstF5I	GGATG	5 cut(s)	1080, 1537, 1699, 2215, 2398
BstFNI	CGCG	3 cut(s)	20, 1093, 1872
BstH2I	RGCGCY	1 cut(s)	1703
BstHHI	GCGC	3 cut(s)	1196, 1702, 1874
BstMAI	GTCTC	6 cut(s)	132, 1253, 1443, 2879, 3032, 3242
BstMCI	CGRYCG	1 cut(s)	54
BstNI	CCWGG	1 cut(s)	405
BstNSI	RCATGY	3 cut(s)	880, 1754, 3302
BstSCI	CCNGG	1 cut(s)	403
BstSFI	CTRYAG	2 cut(s)	708, 1482
BstSNI	TACGTA	1 cut(s)	1595
BstUI	CGCG	3 cut(s)	20, 1093, 1872
BstV1I	GCAGC	6 cut(s)	874, 1846, 2382, 3141, 3292, 3342
BstV2I	GAAGAC	2 cut(s)	54, 2956
BstX2I	RGATCY	5 cut(s)	218, 1322, 1441, 2373, 3171
BstYI	RGATCY	5 cut(s)	218, 1322, 1441, 2373, 3171
Bsu15I	ATCGAT	3 cut(s)	288, 2547, 3402
Bsu36I	CCTNAGG	1 cut(s)	2007
BsuRI	GGCC	4 cut(s)	261, 1424, 1480, 3040
BsuTUI	ATCGAT	3 cut(s)	288, 2547, 3402
BtgI	CCRYGG	1 cut(s)	262
BtgZI	GCGATG	1 cut(s)	3378
BtsCI	GGATG	5 cut(s)	1080, 1537, 1699, 2215, 2398
BtsI	GCAGTG	3 cut(s)	807, 822, 1203
BveI	ACCTGC	1 cut(s)	1477
Cac8I	GCNNGC	4 cut(s)	932, 1620, 1846, 3038
CciI	TCATGA	4 cut(s)	864, 2128, 2841, 3030
CfoI	GCGC	3 cut(s)	1196, 1702, 1874
Cfr10I	RCCGGY	2 cut(s)	2144, 2743
Cfr13I	GGNCC	1 cut(s)	1466
ClaI	ATCGAT	3 cut(s)	288, 2547, 3402
CseI	GACGC	3 cut(s)	26, 113, 2585
Csp6I	GTAC	5 cut(s)	134, 1405, 2421, 3145, 3205
CspAI	ACCGGT	1 cut(s)	2743
CspCI	CAANNNNNGTGG	2 cut(s)	1788, 1823
CviQI	GTAC	5 cut(s)	134, 1405, 2421, 3145, 3205
DdeI	CTNAG	5 cut(s)	566, 986, 2007, 2601, 3116
DraI	TTTAAA	3 cut(s)	910, 1584, 2259
DrdI	GACNNNNNNGTC	1 cut(s)	58
DseDI	GACNNNNNNGTC	1 cut(s)	58
EaeI	YGGCCR	1 cut(s)	259
Eam1104I	CTCTTC	5 cut(s)	119, 198, 330, 2238, 2754
EarI	CTCTTC	5 cut(s)	119, 198, 330, 2238, 2754
Eco105I	TACGTA	1 cut(s)	1595
Eco130I	CCWWGG	3 cut(s)	247, 262, 1039
Eco147I	AGGCCT	1 cut(s)	1424
Eco24I	GRGCYC	1 cut(s)	2641
Eco31I	GGTCTC	2 cut(s)	3032, 3242
Eco47I	GGWCC	1 cut(s)	1466
Eco57I	CTGAAG	4 cut(s)	1026, 1680, 2817, 2981
Eco81I	CCTNAGG	1 cut(s)	2007
Eco88I	CYCGRG	1 cut(s)	2084
EcoNI	CCTNNNNNAGG	3 cut(s)	2087, 2561, 3318
EcoO109I	RGGNCCY	1 cut(s)	1466
EcoRI	GAATTC	2 cut(s)	267, 1045
EcoRII	CCWGG	1 cut(s)	403
EcoT14I	CCWWGG	3 cut(s)	247, 262, 1039
EcoT38I	GRGCYC	1 cut(s)	2641
ErhI	CCWWGG	3 cut(s)	247, 262, 1039
Esp3I	CGTCTC	2 cut(s)	1443, 2879
FalI	AAGNNNNNCTT	8 cut(s)	684, 716, 2081, 2113, 2748, 2780, 2941, 2973
FaqI	GGGAC	7 cut(s)	386, 393, 482, 510, 619, 1781, 2442
FauI	CCCGC	1 cut(s)	2785
FauNDI	CATATG	1 cut(s)	2674
FbaI	TGATCA	3 cut(s)	1705, 2205, 2989
FblI	GTMKAC	1 cut(s)	102
Fnu4HI	GCNGC	7 cut(s)	888, 1860, 2396, 2781, 3130, 3281, 3331
FokI	GGATG	5 cut(s)	1067, 1524, 1706, 2202, 2385
FriOI	GRGCYC	1 cut(s)	2641
Fsp4HI	GCNGC	7 cut(s)	888, 1860, 2396, 2781, 3130, 3281, 3331
GlaI	GCGC	3 cut(s)	1195, 1701, 1873
GluI	GCNGC	7 cut(s)	888, 1860, 2396, 2781, 3130, 3281, 3331
GsaI	CCCAGC	2 cut(s)	843, 3230
GsuI	CTGGAG	4 cut(s)	62, 426, 685, 2349
HaeII	RGCGCY	1 cut(s)	1703
HaeIII	GGCC	4 cut(s)	261, 1424, 1480, 3040
HapII	CCGG	4 cut(s)	320, 518, 2145, 2744
HgaI	GACGC	3 cut(s)	26, 113, 2585
HhaI	GCGC	3 cut(s)	1196, 1702, 1874
Hin1I	GRCGYC	1 cut(s)	105
Hin6I	GCGC	3 cut(s)	1194, 1700, 1872
HinP1I	GCGC	3 cut(s)	1194, 1700, 1872
HincII	GTYRAC	2 cut(s)	103, 2964
HindII	GTYRAC	2 cut(s)	103, 2964
HindIII	AAGCTT	4 cut(s)	928, 2156, 2809, 2829
HpaI	GTTAAC	1 cut(s)	2964
HpaII	CCGG	4 cut(s)	320, 518, 2145, 2744
HphI	GGTGA	4 cut(s)	350, 926, 2200, 2781
Hpy166II	GTNNAC	7 cut(s)	103, 358, 1078, 2252, 2964, 3145, 3296
Hpy8I	GTNNAC	7 cut(s)	103, 358, 1078, 2252, 2964, 3145, 3296
Hpy99I	CGWCG	4 cut(s)	20, 25, 107, 122
HpyCH4III	ACNGT	9 cut(s)	10, 187, 775, 862, 920, 1022, 1486, 2417, 2874
HpyCH4IV	ACGT	5 cut(s)	452, 479, 1074, 1594, 2974
HpyF3I	CTNAG	5 cut(s)	566, 986, 2007, 2601, 3116
HpySE526I	ACGT	5 cut(s)	452, 479, 1074, 1594, 2974
Hsp92I	GRCGYC	1 cut(s)	105
HspAI	GCGC	3 cut(s)	1194, 1700, 1872
Ksp22I	TGATCA	3 cut(s)	1705, 2205, 2989
KspAI	GTTAAC	1 cut(s)	2964
LguI	GCTCTTC	4 cut(s)	198, 330, 2238, 2754
LmnI	GCTCC	6 cut(s)	233, 544, 704, 1459, 2918, 2927
Lsp1109I	GCAGC	6 cut(s)	874, 1846, 2382, 3141, 3292, 3342
LweI	GCATC	7 cut(s)	746, 943, 1626, 1671, 2122, 2361, 2407
MaeII	ACGT	5 cut(s)	452, 479, 1074, 1594, 2974
MfeI	CAATTG	4 cut(s)	795, 1881, 1895, 3264
MflI	RGATCY	5 cut(s)	218, 1322, 1441, 2373, 3171
MhlI	GDGCHC	1 cut(s)	2641
MlyI	GAGTC	4 cut(s)	2340, 2424, 2856, 2932
MmeI	TCCRAC	5 cut(s)	100, 1087, 1108, 2082, 2426
MroXI	GAANNNNTTC	3 cut(s)	1011, 1530, 3403
MslI	CAYNNNNRTG	4 cut(s)	1126, 1595, 2127, 2461
MspCI	CTTAAG	1 cut(s)	2377
MspI	CCGG	4 cut(s)	320, 518, 2145, 2744
MspR9I	CCNGG	1 cut(s)	405
MunI	CAATTG	4 cut(s)	795, 1881, 1895, 3264
Mva1269I	GAATGC	1 cut(s)	1011
MvaI	CCWGG	1 cut(s)	405
MvnI	CGCG	3 cut(s)	20, 1093, 1872
NcoI	CCATGG	1 cut(s)	262
NdeI	CATATG	1 cut(s)	2674
NlaIV	GGNNCC	3 cut(s)	177, 1324, 1930
NmuCI	GTSAC	6 cut(s)	448, 914, 1810, 2296, 2677, 3268
NspI	RCATGY	3 cut(s)	880, 1754, 3302
PaeR7I	CTCGAG	1 cut(s)	2084
PagI	TCATGA	4 cut(s)	864, 2128, 2841, 3030
PceI	AGGCCT	1 cut(s)	1424
PciI	ACATGT	1 cut(s)	1750
PciSI	GCTCTTC	4 cut(s)	198, 330, 2238, 2754
PcsI	WCGNNNNNNNCGW	1 cut(s)	195
PctI	GAATGC	1 cut(s)	1011
PdmI	GAANNNNTTC	3 cut(s)	1011, 1530, 3403
PinAI	ACCGGT	1 cut(s)	2743
PkrI	GCNGC	7 cut(s)	889, 1861, 2397, 2782, 3131, 3282, 3332
PleI	GAGTC	4 cut(s)	2339, 2424, 2855, 2932
PpsI	GAGTC	4 cut(s)	2339, 2424, 2855, 2932
Ppu21I	YACGTR	2 cut(s)	1595, 2975
PpuMI	RGGWCCY	1 cut(s)	1466
PscI	ACATGT	1 cut(s)	1750
PsiI	TTATAA	1 cut(s)	2307
Psp5II	RGGWCCY	1 cut(s)	1466
Psp6I	CCWGG	1 cut(s)	403
PspFI	CCCAGC	2 cut(s)	839, 3226
PspGI	CCWGG	1 cut(s)	403
PspN4I	GGNNCC	3 cut(s)	177, 1324, 1930
PspPI	GGNCC	1 cut(s)	1466
PspPPI	RGGWCCY	1 cut(s)	1466
PsrI	GAACNNNNNNTAC	2 cut(s)	1912, 1944
PsuI	RGATCY	5 cut(s)	218, 1322, 1441, 2373, 3171
RsaI	GTAC	5 cut(s)	135, 1406, 2422, 3146, 3206
RsaNI	GTAC	5 cut(s)	134, 1405, 2421, 3145, 3205
RseI	CAYNNNNRTG	4 cut(s)	1126, 1595, 2127, 2461
SalI	GTCGAC	1 cut(s)	101
SapI	GCTCTTC	4 cut(s)	198, 330, 2238, 2754
SatI	GCNGC	7 cut(s)	888, 1860, 2396, 2781, 3130, 3281, 3331
Sau96I	GGNCC	1 cut(s)	1466
SchI	GAGTC	4 cut(s)	2340, 2424, 2856, 2932
ScrFI	CCNGG	1 cut(s)	405
SduI	GDGCHC	1 cut(s)	2641
SfaNI	GCATC	7 cut(s)	746, 943, 1626, 1671, 2122, 2361, 2407
SfcI	CTRYAG	2 cut(s)	708, 1482
Sfr274I	CTCGAG	1 cut(s)	2084
SinI	GGWCC	1 cut(s)	1466
SlaI	CTCGAG	1 cut(s)	2084
SmiMI	CAYNNNNRTG	4 cut(s)	1126, 1595, 2127, 2461
SmlI	CTYRAG	6 cut(s)	752, 828, 2084, 2377, 2980, 3231
SmoI	CTYRAG	6 cut(s)	752, 828, 2084, 2377, 2980, 3231
SnaBI	TACGTA	1 cut(s)	1595
SpeI	ACTAGT	1 cut(s)	1528
SseBI	AGGCCT	1 cut(s)	1424
SsiI	CCGC	4 cut(s)	1236, 1600, 2778, 2781
SspI	AATATT	4 cut(s)	1389, 1675, 1924, 3049
StuI	AGGCCT	1 cut(s)	1424
StyD4I	CCNGG	1 cut(s)	403
StyI	CCWWGG	3 cut(s)	247, 262, 1039
TaaI	ACNGT	9 cut(s)	10, 187, 775, 862, 920, 1022, 1486, 2417, 2874
TaiI	ACGT	5 cut(s)	455, 482, 1077, 1597, 2977
TaqII	GACCGA	1 cut(s)	68
TatI	WGTACW	3 cut(s)	2420, 3144, 3204
TauI	GCSGC	1 cut(s)	2783
TseFI	GTSAC	6 cut(s)	448, 914, 1810, 2296, 2677, 3268
TseI	GCWGC	6 cut(s)	887, 1859, 2395, 3129, 3280, 3330
Tsp45I	GTSAC	6 cut(s)	448, 914, 1810, 2296, 2677, 3268
TspGWI	ACGGA	4 cut(s)	447, 1210, 2006, 2208
Vha464I	CTTAAG	1 cut(s)	2377
VpaK11BI	GGWCC	1 cut(s)	1466
XagI	CCTNNNNNAGG	3 cut(s)	2087, 2561, 3318
XapI	RAATTY	5 cut(s)	267, 680, 1045, 1240, 2517
XceI	RCATGY	3 cut(s)	880, 1754, 3302
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2331
XhoI	CTCGAG	1 cut(s)	2084
XmiI	GTMKAC	1 cut(s)	102
XmnI	GAANNNNTTC	3 cut(s)	1011, 1530, 3403

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.