Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0005014

Physical Location & Seq

Genomic Coordinates Forward (+)

31935216 .. 31945664

Gene Structure 10449 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G339200.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3507 bp

ATGGCGACGGTGACAGAATGGCAGTTACCGTACAGAATATTGGGGGCAGAGGAAGAAGAAGAAAGCTCATCATCAACGACATCGGATCCAACGGACGCAGTGGCATTCGTGGGGCTGTCTTTGGTGTTAGGAATCGCTTGCAGGCATCTGTTGCGTGGTACCAGAGTACCCTACACTGTGGCTTTGCTCATCCTTGGCATTGCCCTCGGTTCCATAGAATATGGTACACATCATCAAATGGGGAAGATTGGGGAAGGCATTCGAATTTGGGCAAATATTGATCCTGACCTTCTATTGGCTGTTTTTCTTCCCGCCCTTCTTTTTGAGAGTTCGTTTTCTATGGAAGTGCACCAAATAAAGAGGTGTATGGTACAAATGATTATACTGGCTGGTCCCGGTGTTCTAATATCAACTTTCTGCCTTGGATCTGCTTTGAAGCTCACTTTCCCTTATGGCTGGAGTTGGAAAACATCATTGTTGCTTGGCGGGCTTCTCAGCGCTACTGATCCTGTGGCTGTTGTTGCACTATTAAAAGAGCTTGGTGCAAGCAAAAAACTGAGTACAATAATTGAGGGAGAATCCTTGATGAATGATGGGACAGCAATTGTGGTTTATCAGCTATTTTATCGAATGGTTCTTGGAAAAAGCTATGACTGGGTGGAAATAATTAAATTTCTATCTCAAGTCTCACTTGGAGCTGTAGGCATTGGTCTTGCTTATGGTATAGTATCTGTCCTCTGGCTCGGGTTCATTTTCAATGACACTGTGATAGAGATCACACTAACACTTGCTGTCAGCTACGTTGCTTACTTCACTGCTCAAGAGGGTGTTGAAGTGTCTGGTGTCTTGACGGTGATGACTTTAGGAATGTTTTATGCTGCAGTTGCAAGGACAGCTTTTAAGGGTGAAAGCCAACAAAGCTTACATCATTTCTGGGAAATGGTTGCTTATATTGCTAATACCTTAATTTTCATCTTAAGTGGAGTTGTTATAGCTGAAGGAGTTCTTAGCGGTGAAAATTTTCTTGAAAATGGATATTCTTGGGCCTATCTCATTCTTCTCTATGTTTACATACAAGTTTCCCGGTTCATAGTTGTTGGGGTGTCGTTTCCCTTGCTTCGGTATTTTGGCTATGGTTTGGATTGGAAAGAGGCTATAATCCTTATATGGTCAGGTCTGAGAGGGGCTGTAGCATTGTCACTTTCACTGTCAGTCAAGCGTACTAGTGACAGCTCTTCGCTTCTCAGTTCTGACACAGGATTCTTGTTTGTTTTCTTCACTGGTGGAATCGTCTTCTTGACACTAATTGTGAATGGTTCAACCACACAATTTGTTTTACGCCTTCTAGATATGGACAAGCTATCAGCAGCTAAGAGGCGTGTACTGGAGTATACAAAATATGAAATGTTGAACAAAGCATTAGAGGCTTTTGGTGATCTTGGAGATGATGAGGAATTGGGACCGGCTGACTGGCCCACAGTGAGAGGATATATTGCAAGCTTAAATAATGTTGATAGCGAACATGTACACCCTCATGCTGCATCTGAAAGAGATAATAATCGGGATCTTACAAATTTGAAGGATATACGCGAACGTCTTTTGAATGGAGTACAAGCTGCTTACTGGAGCATGCTTGATGAGGGAAGGATTACACAATCTACTGCAAATATTTTGATGCAATCAGTAGACGAAGCAATTGACTTGGTTTCAGATGAGCCTCTGTGTGACTGGAAAGGTTTAAAAGCTCATGTTCATTTCCCGAATTACTACAAGTTCCATAAAACAAGCATTTGCCCACAGAAGTTGGTAACCTATTTCACTGTGCAAAGGCTGGAATCTGCATGTTACATTTGTGCTTCCTTTCTTCGTGCCCATAGAATTGCAAGGCAGCAACTTCATGACTTTATAGGTGATAGTGAAGTTGCTTCTGTCGTCATTAATGAAAGTGAGGCAGAAGGAGAAGAAGCAAAAAAGTTTCTTGAAGATGTTCGTGTCACATTTCCTCAGGTTTTGCGTGTTGTGAAAACAAGACAAGTGACGTACTCAGTTCTAAACCATTTAATTGATTATCTCCAAAACCTTGAGAAGGTTGGCCTATTGGAAGAAAAAGAGATGCTTCATCTTCATGATGCCGTCCAGACTGACTTGAAAAAGCTTCTAAGGAATCCCCCATTAGTAAAGATTCCCAAAATAAATGATTTGATTAGTCTCCATCCTCTAATGGGGGCTCTTCCTCCTTCAGTTCGTGAACCACTTGAAGGTTCTACTAAGGAAACAATGAAATTGCGTGGGGTGACACTTTACAGGGAGGGCTCCAAGCCTACTGGTATTTGGCTTCTTTCCACTGGGGTAGTCAAGTGGATAAGTAAAAGCATAAAAAACAAGCACTCGCTGCATCCAACTTTTACTCATGGGAGTACTTTGGGACTATATGAAGTGCTAACCGGAAAGCCCTACATTTGTGACATGATCACAGATTCTGTGGTTCTCTGCTTTTGCATTGAAACTCACAAGATACTTTCAGTGCTTCAGTCAGATCCCTCAGTAGAACACTTCCTCTGGCAGGAAAGTGCCATTGCTCTTGTGAAACTTTTCCTTCCACAAATATTTGAGAAAATGGCAATGCAAGATTTGAGAGCTCTTGTTGCAGAAAGGTCAATGATGACCATTTACATAAGAGGAGAATCTTTTGAAATTCCTTACCGTTCCATTGGGTTTCTATTAGAAGGTTTTGTTAAAACCCAAGGTGTCCAAGAAGAACTGATCACATCACCTGCTCCTCTGTTGCCCCCACATGGTTACCAAAGCTTCCCAAATCTGGAAGCATCAGGCACCAGGGGAGCCAGTTTTTCTCATCTAGGATCCAGTTATCTTGTTGAAACAAGATCAAGAGTGATTATATTCGACATTGCAGCATTTGAATCTGACAGTACTCTAATTAGAAGGCCATCCTCATTTGTAACACATGCAGTTGATCACCCCCATAGATCTATTAGCGGAGAACATAGTGGTCTTATGAGTTGGCCTGAACATTTCTACAAGGCAAAGCAACAAAAGCAGAACCCTGAAGGGATTGAGTTGCAAGCTAATAGCTTGTCAGCAAGGGCAATGCAGTGGAGCATTTATGGCAGCATGGTGAATGTCCGGCGGCGCAACAGAAGTTTTCCAAGAAGTGATCGCATTAAGCCATTACACACCGTGTCATATCCAAGTGTTCCAGCATATCAGGGCCCTCCCCATAATGTCTCATATCCGAGTGTTCCATCATATCATGGCCGTCCGCTTGTTTCTGTCAGATCAGAAGGGGCTACAACTGTCAGAAAGAACCTTGAAGTGAGAAAATTCACTGGACAAATGAGTCCTCCAGAACCGGGGGAGCGAAGTAGAGACCCTCATAAGAGTCATGCGGTAGTGGAAGATTATTCCAGTGATGAATCAGGTGGTGAGGATGATGTAATAGTGAGAATTGATTCACCAAGTAGGCTCTCTTTCCGCCGTGCTCCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000302 GO:0003674 GO:0005215 GO:0005451 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006813 GO:0006814 GO:0006873 GO:0006885 GO:0006950 GO:0006970 GO:0006979 GO:0008150 GO:0008324 GO:0009507 GO:0009526 GO:0009536 GO:0009628 GO:0009636 GO:0009651 GO:0009941 GO:0009987 GO:0010035 GO:0015075 GO:0015077 GO:0015078 GO:0015079 GO:0015081 GO:0015291 GO:0015297 GO:0015298 GO:0015299 GO:0015318 GO:0015385 GO:0015386 GO:0015491 GO:0015672 GO:0016020 GO:0019222 GO:0019725 GO:0022804 GO:0022821 GO:0022857 GO:0022890 GO:0030001 GO:0030003 GO:0030004 GO:0030641 GO:0031323 GO:0031967 GO:0031975 GO:0034220 GO:0035725 GO:0042221 GO:0042493 GO:0042542 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046677 GO:0046873 GO:0048878 GO:0050789 GO:0050794 GO:0050801 GO:0050896 GO:0051179 GO:0051234 GO:0051453 GO:0055067 GO:0055080 GO:0055082 GO:0055085 GO:0065007 GO:0065008 GO:0071804 GO:0071805 GO:0071944 GO:0098655 GO:0098657 GO:0098659 GO:0098660 GO:0098662 GO:0098719 GO:0098739 GO:0098771 GO:0099516 GO:0099587 GO:1901700 GO:1902600 GO:2000377

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Na_H_Exchanger cNMP_binding

Protein Analysis

1169

Amino Acids

130.16

Weight (kDa)

6.27

Isoelectric Point (pI)

39.48

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005014)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G14660 AT1G14660 AT2G01980
fragaria_vesca	FvH4_4g35880 FvH4_4g35880 FvH4_4g35880 FvH4_4g35880 FvH4_4g35880 FvH4_4g35890
malus_domestica	MD13G1014200.v1.1 MD16G1011300.v1.1 MD16G1011400.v1.1 MD16G1011500.v1.1
prunus_persica	Prupe.1G339200_v2.0.a1 Prupe.1G339200_v2.0.a1
pyrus_communis	pycom13g01220 pycom13g01230 pycom16g01100 pycom16g01110
rosa_chinensis	RchiOBHm_Chr4g0445491
rosa_laevigata	RLG00000005737
rosa_multiflora	Rmu_sc0001509.1_g000010 Rmu_sc0010466.1_g000001
rosa_roxburghii	Rroxscaffold_5G00385970
rosa_rugosa	Rorug04G0361700
rosa_samantha	Rh4AG423100 Rh4BG435100 Rh4CG450000 Rh4DG431400
rosa_wichuraiana	Rw4G036290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2782
AasI	GACNNNNNNGTC	1 cut(s)	3357
Acc36I	ACCTGC	1 cut(s)	2782
Acc65I	GGTACC	1 cut(s)	158
AccB1I	GGYRCC	2 cut(s)	158, 2831
AccI	GTMKAC	2 cut(s)	1391, 1686
AccII	CGCG	1 cut(s)	1590
AciI	CCGC	8 cut(s)	312, 486, 1011, 2997, 3148, 3281, 3407, 3493
AclWI	GGATC	9 cut(s)	80, 93, 275, 433, 500, 1572, 2531, 2856, 2869
AcoI	YGGCCR	1 cut(s)	3274
AcsI	RAATTY	6 cut(s)	264, 671, 1018, 1573, 2694, 3341
AcuI	CTGAAG	4 cut(s)	1017, 2223, 2513, 3087
AdeI	CACNNNGTG	1 cut(s)	3199
AfeI	AGCGCT	1 cut(s)	499
AfiI	CCNNNNNNNGG	9 cut(s)	295, 1119, 2086, 2222, 2258, 2563, 2795, 2818, 3371
AflII	CTTAAG	1 cut(s)	976
AflIII	ACRYGT	1 cut(s)	1522
AhlI	ACTAGT	1 cut(s)	1223
AjnI	CCWGG	1 cut(s)	2834
Alw21I	GWGCWC	3 cut(s)	351, 2641, 3502
Alw26I	GTCTC	4 cut(s)	691, 2213, 3250, 3381
Alw44I	GTGCAC	1 cut(s)	347
AlwI	GGATC	9 cut(s)	80, 93, 275, 433, 500, 1572, 2531, 2856, 2869
AlwNI	CAGNNNCTG	1 cut(s)	2480
Ama87I	CYCGRG	1 cut(s)	743
Aor51HI	AGCGCT	1 cut(s)	499
AoxI	GGCC	7 cut(s)	1044, 1472, 2092, 2945, 3023, 3229, 3274
ApaI	GGGCCC	1 cut(s)	3233
ApaLI	GTGCAC	1 cut(s)	347
ApeKI	GCWGC	8 cut(s)	878, 1367, 1538, 1616, 1888, 2392, 2912, 3129
ApoI	RAATTY	6 cut(s)	264, 671, 1018, 1573, 2694, 3341
AseI	ATTAAT	1 cut(s)	1938
Asp700I	GAANNNNTTC	6 cut(s)	258, 1002, 1020, 1986, 2591, 3469
Asp718I	GGTACC	1 cut(s)	158
AspLEI	GCGC	2 cut(s)	500, 3153
AspS9I	GGNCC	6 cut(s)	392, 1044, 1460, 1473, 3229, 3230
AsuC2I	CCSGG	3 cut(s)	396, 1084, 3372
AsuII	TTCGAA	1 cut(s)	262
AvaI	CYCGRG	1 cut(s)	743
AvaII	GGWCC	2 cut(s)	392, 1460
AxyI	CCTNAGG	1 cut(s)	2004
BaeGI	GKGCMC	3 cut(s)	351, 1873, 3233
BaeI	ACNNNNGTAYC	4 cut(s)	150, 150, 183, 183
BamHI	GGATCC	2 cut(s)	85, 2861
BanI	GGYRCC	2 cut(s)	158, 2831
BanII	GRGCYC	4 cut(s)	2230, 2315, 2641, 3233
BbsI	GAAGAC	1 cut(s)	1285
Bbv12I	GWGCWC	3 cut(s)	351, 2641, 3502
BbvI	GCAGC	8 cut(s)	865, 1379, 1525, 1603, 1900, 2379, 2924, 3141
BccI	CCATC	4 cut(s)	587, 2220, 2956, 3271
BceAI	ACGGC	3 cut(s)	2117, 3261, 3480
BcgI	CGANNNNNNTGC	2 cut(s)	187, 221
BciT130I	CCWGG	1 cut(s)	2836
BclI	TGATCA	3 cut(s)	2469, 2763, 2974
BcnI	CCSGG	3 cut(s)	396, 1084, 3372
BcoDI	GTCTC	4 cut(s)	691, 2213, 3250, 3381
BcuI	ACTAGT	1 cut(s)	1223
BfaI	CTAG	3 cut(s)	1224, 1346, 2858
BfmI	CTRYAG	3 cut(s)	699, 879, 1188
BfoI	RGCGCY	1 cut(s)	501
BfrI	CTTAAG	1 cut(s)	976
BfuAI	ACCTGC	1 cut(s)	2782
BglII	AGATCT	1 cut(s)	2987
BisI	GCNGC	9 cut(s)	879, 1368, 1539, 1617, 1889, 2393, 2913, 3130, 3149
BlsI	GCNGC	9 cut(s)	880, 1369, 1540, 1618, 1890, 2394, 2914, 3131, 3150
BmcAI	AGTACT	2 cut(s)	2419, 2932
Bme1390I	CCNGG	4 cut(s)	396, 1084, 2836, 3372
Bme18I	GGWCC	2 cut(s)	392, 1460
BmeT110I	CYCGRG	1 cut(s)	743
BmgT120I	GGNCC	6 cut(s)	392, 1044, 1460, 1473, 3229, 3230
BmrFI	CCNGG	4 cut(s)	396, 1084, 2836, 3372
BmrI	ACTGGG	2 cut(s)	664, 2355
BmsI	GCATC	7 cut(s)	154, 1550, 1665, 2103, 2119, 2404, 2834
BmuI	ACTGGG	2 cut(s)	664, 2355
BpiI	GAAGAC	1 cut(s)	1285
BpmI	CTGGAG	4 cut(s)	478, 1406, 1645, 3348
Bpu14I	TTCGAA	1 cut(s)	262
BpuEI	CTTGAG	3 cut(s)	666, 804, 2102
BpuMI	CCSGG	3 cut(s)	396, 1084, 3372
BsaBI	GATNNNNATC	2 cut(s)	773, 1557
BsaI	GGTCTC	1 cut(s)	3381
BsaJI	CCNNGG	6 cut(s)	193, 205, 421, 2743, 2835, 3371
BsaWI	WCCGGW	1 cut(s)	2444
Bsc4I	CCNNNNNNNGG	9 cut(s)	295, 1119, 2086, 2222, 2258, 2563, 2795, 2818, 3371
Bse118I	RCCGGY	1 cut(s)	1462
Bse21I	CCTNAGG	1 cut(s)	2004
Bse3DI	GCAATG	5 cut(s)	198, 2574, 2628, 2907, 3114
Bse8I	GATNNNNATC	2 cut(s)	773, 1557
BseBI	CCWGG	1 cut(s)	2836
BseDI	CCNNGG	6 cut(s)	193, 205, 421, 2743, 2835, 3371
BseGI	GGATG	5 cut(s)	189, 2212, 2395, 2948, 3454
BseJI	GATNNNNATC	2 cut(s)	773, 1557
BseLI	CCNNNNNNNGG	9 cut(s)	295, 1119, 2086, 2222, 2258, 2563, 2795, 2818, 3371
BseMI	GCAATG	5 cut(s)	198, 2574, 2628, 2907, 3114
BseMII	CTCAG	7 cut(s)	508, 548, 1169, 1258, 2018, 2058, 2556
BseRI	GAGGAG	2 cut(s)	2694, 2769
BseSI	GKGCMC	3 cut(s)	351, 1873, 3233
BseXI	GCAGC	8 cut(s)	865, 1379, 1525, 1603, 1900, 2379, 2924, 3141
Bsh1236I	CGCG	1 cut(s)	1590
BshFI	GGCC	7 cut(s)	1046, 1474, 2094, 2947, 3025, 3231, 3276
BshNI	GGYRCC	2 cut(s)	158, 2831
BsiHKAI	GWGCWC	3 cut(s)	351, 2641, 3502
BsiHKCI	CYCGRG	1 cut(s)	743
BsiSI	CCGG	6 cut(s)	396, 1084, 1463, 2445, 3145, 3371
BslFI	GGGAC	4 cut(s)	378, 610, 1473, 2439
BslI	CCNNNNNNNGG	9 cut(s)	295, 1119, 2086, 2222, 2258, 2563, 2795, 2818, 3371
BsmAI	GTCTC	4 cut(s)	691, 2213, 3250, 3381
BsmFI	GGGAC	4 cut(s)	378, 610, 1473, 2439
BsmI	GAATGC	2 cut(s)	104, 258
BsnI	GGCC	7 cut(s)	1046, 1474, 2094, 2947, 3025, 3231, 3276
Bso31I	GGTCTC	1 cut(s)	3381
BsoBI	CYCGRG	1 cut(s)	743
Bsp119I	TTCGAA	1 cut(s)	262
Bsp120I	GGGCCC	1 cut(s)	3229
Bsp1286I	GDGCHC	7 cut(s)	351, 1873, 2230, 2315, 2641, 3233, 3502
Bsp1407I	TGTACA	1 cut(s)	1525
BspACI	CCGC	8 cut(s)	312, 486, 1011, 2997, 3148, 3281, 3407, 3493
BspANI	GGCC	7 cut(s)	1046, 1474, 2094, 2947, 3025, 3231, 3276
BspCNI	CTCAG	7 cut(s)	507, 549, 1170, 1257, 2017, 2057, 2555
BspFNI	CGCG	1 cut(s)	1590
BspHI	TCATGA	2 cut(s)	1897, 2125
BspMAI	CTGCAG	1 cut(s)	883
BspMI	ACCTGC	1 cut(s)	2782
BspPI	GGATC	9 cut(s)	80, 93, 275, 433, 500, 1572, 2531, 2856, 2869
BspQI	GCTCTTC	2 cut(s)	1240, 2235
BspT104I	TTCGAA	1 cut(s)	262
BspT107I	GGYRCC	2 cut(s)	158, 2831
BspTI	CTTAAG	1 cut(s)	976
BspTNI	GGTCTC	1 cut(s)	3381
BsrDI	GCAATG	5 cut(s)	198, 2574, 2628, 2907, 3114
BsrFI	RCCGGY	1 cut(s)	1462
BsrGI	TGTACA	1 cut(s)	1525
BssAI	RCCGGY	1 cut(s)	1462
BssECI	CCNNGG	6 cut(s)	193, 205, 421, 2743, 2835, 3371
BssNAI	GTATAC	1 cut(s)	1392
BssT1I	CCWWGG	3 cut(s)	193, 421, 2743
Bst1107I	GTATAC	1 cut(s)	1392
Bst2UI	CCWGG	1 cut(s)	2836
Bst6I	CTCTTC	2 cut(s)	1240, 2235
BstAFI	CTTAAG	1 cut(s)	976
BstAPI	GCANNNNNTGC	2 cut(s)	151, 2392
BstAUI	TGTACA	1 cut(s)	1525
BstBI	TTCGAA	1 cut(s)	262
BstC8I	GCNNGC	7 cut(s)	139, 143, 488, 547, 1498, 1631, 3084
BstEII	GGTNACC	2 cut(s)	1807, 2798
BstENI	CCTNNNNNAGG	2 cut(s)	2084, 2561
BstF5I	GGATG	5 cut(s)	189, 2212, 2395, 2948, 3454
BstFNI	CGCG	1 cut(s)	1590
BstH2I	RGCGCY	1 cut(s)	501
BstHHI	GCGC	2 cut(s)	500, 3153
BstMAI	GTCTC	4 cut(s)	691, 2213, 3250, 3381
BstNI	CCWGG	1 cut(s)	2836
BstNSI	RCATGY	4 cut(s)	1526, 1633, 1845, 2969
BstPI	GGTNACC	2 cut(s)	1807, 2798
BstSCI	CCNGG	4 cut(s)	394, 1082, 2834, 3370
BstSFI	CTRYAG	3 cut(s)	699, 879, 1188
BstSLI	GKGCMC	3 cut(s)	351, 1873, 3233
BstUI	CGCG	1 cut(s)	1590
BstV1I	GCAGC	8 cut(s)	865, 1379, 1525, 1603, 1900, 2379, 2924, 3141
BstV2I	GAAGAC	1 cut(s)	1285
BstX2I	RGATCY	6 cut(s)	85, 425, 1564, 2536, 2861, 2987
BstYI	RGATCY	6 cut(s)	85, 425, 1564, 2536, 2861, 2987
BstZ17I	GTATAC	1 cut(s)	1392
Bsu36I	CCTNAGG	1 cut(s)	2004
BsuRI	GGCC	7 cut(s)	1046, 1474, 2094, 2947, 3025, 3231, 3276
BtsCI	GGATG	5 cut(s)	189, 2212, 2395, 2948, 3454
BtsI	GCAGTG	3 cut(s)	105, 813, 3119
BveI	ACCTGC	1 cut(s)	2782
Cac8I	GCNNGC	7 cut(s)	139, 143, 488, 547, 1498, 1631, 3084
CaiI	CAGNNNCTG	1 cut(s)	2480
CciI	TCATGA	2 cut(s)	1897, 2125
CfoI	GCGC	2 cut(s)	500, 3153
Cfr10I	RCCGGY	1 cut(s)	1462
Cfr13I	GGNCC	6 cut(s)	392, 1044, 1460, 1473, 3229, 3230
CseI	GACGC	1 cut(s)	104
CspCI	CAANNNNNGTGG	4 cut(s)	1312, 1347, 1785, 1820
DraI	TTTAAA	1 cut(s)	1740
DraIII	CACNNNGTG	1 cut(s)	3199
DrdI	GACNNNNNNGTC	1 cut(s)	3357
DseDI	GACNNNNNNGTC	1 cut(s)	3357
EaeI	YGGCCR	1 cut(s)	3274
Eam1104I	CTCTTC	2 cut(s)	1240, 2235
EarI	CTCTTC	2 cut(s)	1240, 2235
EciI	GGCGGA	1 cut(s)	3482
Ecl136II	GAGCTC	1 cut(s)	2639
Eco130I	CCWWGG	3 cut(s)	193, 421, 2743
Eco24I	GRGCYC	4 cut(s)	2230, 2315, 2641, 3233
Eco31I	GGTCTC	1 cut(s)	3381
Eco47I	GGWCC	2 cut(s)	392, 1460
Eco47III	AGCGCT	1 cut(s)	499
Eco53kI	GAGCTC	1 cut(s)	2639
Eco57I	CTGAAG	4 cut(s)	1017, 2223, 2513, 3087
Eco81I	CCTNAGG	1 cut(s)	2004
Eco88I	CYCGRG	1 cut(s)	743
Eco91I	GGTNACC	2 cut(s)	1807, 2798
EcoICRI	GAGCTC	1 cut(s)	2639
EcoNI	CCTNNNNNAGG	2 cut(s)	2084, 2561
EcoO109I	RGGNCCY	2 cut(s)	3229, 3230
EcoO65I	GGTNACC	2 cut(s)	1807, 2798
EcoRII	CCWGG	1 cut(s)	2834
EcoT14I	CCWWGG	3 cut(s)	193, 421, 2743
EcoT38I	GRGCYC	4 cut(s)	2230, 2315, 2641, 3233
ErhI	CCWWGG	3 cut(s)	193, 421, 2743
FalI	AAGNNNNNCTT	8 cut(s)	675, 707, 880, 912, 990, 1022, 2100, 2132
FaqI	GGGAC	4 cut(s)	378, 610, 1473, 2439
FauI	CCCGC	2 cut(s)	319, 479
FbaI	TGATCA	3 cut(s)	2469, 2763, 2974
FblI	GTMKAC	2 cut(s)	1391, 1686
Fnu4HI	GCNGC	9 cut(s)	879, 1368, 1539, 1617, 1889, 2393, 2913, 3130, 3149
FokI	GGATG	5 cut(s)	176, 2199, 2382, 2935, 3461
FriOI	GRGCYC	4 cut(s)	2230, 2315, 2641, 3233
Fsp4HI	GCNGC	9 cut(s)	879, 1368, 1539, 1617, 1889, 2393, 2913, 3130, 3149
FspBI	CTAG	3 cut(s)	1224, 1346, 2858
GlaI	GCGC	2 cut(s)	499, 3152
GluI	GCNGC	9 cut(s)	879, 1368, 1539, 1617, 1889, 2393, 2913, 3130, 3149
GsuI	CTGGAG	4 cut(s)	478, 1406, 1645, 3348
HaeII	RGCGCY	1 cut(s)	501
HaeIII	GGCC	7 cut(s)	1046, 1474, 2094, 2947, 3025, 3231, 3276
HapII	CCGG	6 cut(s)	396, 1084, 1463, 2445, 3145, 3371
HgaI	GACGC	1 cut(s)	104
HhaI	GCGC	2 cut(s)	500, 3153
Hin6I	GCGC	2 cut(s)	498, 3151
HinP1I	GCGC	2 cut(s)	498, 3151
HindIII	AAGCTT	4 cut(s)	919, 1498, 2153, 2806
HpaII	CCGG	6 cut(s)	396, 1084, 1463, 2445, 3145, 3371
Hpy166II	GTNNAC	8 cut(s)	227, 349, 1069, 1382, 1392, 1528, 1687, 2249
Hpy8I	GTNNAC	8 cut(s)	227, 349, 1069, 1382, 1392, 1528, 1687, 2249
Hpy99I	CGWCG	1 cut(s)	10
HpyCH4IV	ACGT	3 cut(s)	801, 1594, 2039
HpySE526I	ACGT	3 cut(s)	801, 1594, 2039
HspAI	GCGC	2 cut(s)	498, 3151
KpnI	GGTACC	1 cut(s)	162
Ksp22I	TGATCA	3 cut(s)	2469, 2763, 2974
LguI	GCTCTTC	2 cut(s)	1240, 2235
LmnI	GCTCC	8 cut(s)	695, 1626, 2318, 2782, 2840, 3117, 3376, 3505
Lsp1109I	GCAGC	8 cut(s)	865, 1379, 1525, 1603, 1900, 2379, 2924, 3141
LweI	GCATC	7 cut(s)	154, 1550, 1665, 2103, 2119, 2404, 2834
MaeI	CTAG	3 cut(s)	1224, 1346, 2858
MaeII	ACGT	3 cut(s)	801, 1594, 2039
MfeI	CAATTG	2 cut(s)	603, 1695
MflI	RGATCY	6 cut(s)	85, 425, 1564, 2536, 2861, 2987
MhlI	GDGCHC	7 cut(s)	351, 1873, 2230, 2315, 2641, 3233, 3502
MlyI	GAGTC	2 cut(s)	3367, 3409
MmeI	TCCRAC	3 cut(s)	113, 443, 2423
MroXI	GAANNNNTTC	6 cut(s)	258, 1002, 1020, 1986, 2591, 3469
MslI	CAYNNNNRTG	2 cut(s)	1533, 2124
MspCI	CTTAAG	1 cut(s)	976
MspI	CCGG	6 cut(s)	396, 1084, 1463, 2445, 3145, 3371
MspR9I	CCNGG	4 cut(s)	396, 1084, 2836, 3372
MunI	CAATTG	2 cut(s)	603, 1695
Mva1269I	GAATGC	2 cut(s)	104, 258
MvaI	CCWGG	1 cut(s)	2836
MvnI	CGCG	1 cut(s)	1590
NciI	CCSGG	3 cut(s)	396, 1084, 3372
NmuCI	GTSAC	8 cut(s)	10, 1197, 1226, 1724, 1993, 2035, 2293, 2462
NspI	RCATGY	4 cut(s)	1526, 1633, 1845, 2969
NspV	TTCGAA	1 cut(s)	262
PaeI	GCATGC	1 cut(s)	1633
PagI	TCATGA	2 cut(s)	1897, 2125
PaqCI	CACCTGC	1 cut(s)	2782
PciI	ACATGT	1 cut(s)	1522
PciSI	GCTCTTC	2 cut(s)	1240, 2235
PctI	GAATGC	2 cut(s)	104, 258
PdmI	GAANNNNTTC	6 cut(s)	258, 1002, 1020, 1986, 2591, 3469
PkrI	GCNGC	9 cut(s)	880, 1369, 1540, 1618, 1890, 2394, 2914, 3131, 3150
PleI	GAGTC	2 cut(s)	3366, 3408
PpsI	GAGTC	2 cut(s)	3366, 3408
PscI	ACATGT	1 cut(s)	1522
PshBI	ATTAAT	1 cut(s)	1938
Psp124BI	GAGCTC	1 cut(s)	2641
Psp6I	CCWGG	1 cut(s)	2834
PspEI	GGTNACC	2 cut(s)	1807, 2798
PspGI	CCWGG	1 cut(s)	2834
PspOMI	GGGCCC	1 cut(s)	3229
PspPI	GGNCC	6 cut(s)	392, 1044, 1460, 1473, 3229, 3230
PstI	CTGCAG	1 cut(s)	883
PstNI	CAGNNNCTG	1 cut(s)	2480
PsuI	RGATCY	6 cut(s)	85, 425, 1564, 2536, 2861, 2987
RseI	CAYNNNNRTG	2 cut(s)	1533, 2124
SacI	GAGCTC	1 cut(s)	2641
SapI	GCTCTTC	2 cut(s)	1240, 2235
SatI	GCNGC	9 cut(s)	879, 1368, 1539, 1617, 1889, 2393, 2913, 3130, 3149
Sau96I	GGNCC	6 cut(s)	392, 1044, 1460, 1473, 3229, 3230
ScaI	AGTACT	2 cut(s)	2419, 2932
SchI	GAGTC	2 cut(s)	3367, 3409
ScrFI	CCNGG	4 cut(s)	396, 1084, 2836, 3372
SduI	GDGCHC	7 cut(s)	351, 1873, 2230, 2315, 2641, 3233, 3502
SfaNI	GCATC	7 cut(s)	154, 1550, 1665, 2103, 2119, 2404, 2834
SfcI	CTRYAG	3 cut(s)	699, 879, 1188
SfuI	TTCGAA	1 cut(s)	262
SinI	GGWCC	2 cut(s)	392, 1460
SmiMI	CAYNNNNRTG	2 cut(s)	1533, 2124
SmlI	CTYRAG	4 cut(s)	681, 819, 976, 2081
SmoI	CTYRAG	4 cut(s)	681, 819, 976, 2081
SpeI	ACTAGT	1 cut(s)	1223
SphI	GCATGC	1 cut(s)	1633
SsiI	CCGC	8 cut(s)	312, 486, 1011, 2997, 3148, 3281, 3407, 3493
SspI	AATATT	4 cut(s)	39, 277, 1669, 2607
SspMI	CTAG	3 cut(s)	1224, 1346, 2858
SstI	GAGCTC	1 cut(s)	2641
StyD4I	CCNGG	4 cut(s)	394, 1082, 2834, 3370
StyI	CCWWGG	3 cut(s)	193, 421, 2743
TaiI	ACGT	3 cut(s)	804, 1597, 2042
TaqI	TCGA	3 cut(s)	262, 628, 2904
TatI	WGTACW	6 cut(s)	560, 1381, 1525, 1609, 2417, 2930
TauI	GCSGC	1 cut(s)	3151
TseFI	GTSAC	8 cut(s)	10, 1197, 1226, 1724, 1993, 2035, 2293, 2462
TseI	GCWGC	8 cut(s)	878, 1367, 1538, 1616, 1888, 2392, 2912, 3129
Tsp45I	GTSAC	8 cut(s)	10, 1197, 1226, 1724, 1993, 2035, 2293, 2462
TspGWI	ACGGA	1 cut(s)	107
Vha464I	CTTAAG	1 cut(s)	976
VneI	GTGCAC	1 cut(s)	347
VpaK11BI	GGWCC	2 cut(s)	392, 1460
VspI	ATTAAT	1 cut(s)	1938
XagI	CCTNNNNNAGG	2 cut(s)	2084, 2561
XapI	RAATTY	6 cut(s)	264, 671, 1018, 1573, 2694, 3341
XbaI	TCTAGA	1 cut(s)	1345
XceI	RCATGY	4 cut(s)	1526, 1633, 1845, 2969
XmiI	GTMKAC	2 cut(s)	1391, 1686
XmnI	GAANNNNTTC	6 cut(s)	258, 1002, 1020, 1986, 2591, 3469
XspI	CTAG	3 cut(s)	1224, 1346, 2858
ZrmI	AGTACT	2 cut(s)	2419, 2932

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.