Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0010761

Physical Location & Seq

Genomic Coordinates Forward (+)

1289832 .. 1291444

Gene Structure 1613 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G04032.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1098 bp

ATGGCTTATTCTAAAGCATGTTATAAACTCACCACCATTACAATTCTTCTTCTATCCTTCACATTACCCTCTCTTGCCGGTAACGCTGAAAACGCAGATGTAAGTGAATGCAAAGCTGAATCTGGAGATCTATCATGTCACAACAACAAAGAAGCACAAAAGCTTAAAATCATTGCAATCCCATCTATCTTAGTGGCGAGCATGATCGGTGTTTCTTTACCGTTGTTTTCTCGTTCCATTCCTGCTTTAGGACCCGATCGAGAAATGTCTGTGATCGTTAAGACTTTAGCTTCGGGTGTAATTCTGGCAACCGGTTTTATGCATGTGTTACCGGACTCTTTCGATGATCTCACATCCAAATGTTTGCCTGAAGACCCGTGGCAGAAGTTTCCTTTCGCCACTTTCATCACGATGATCTCGGCTTTGCTCGTTTTAATGATTGAATCGTTTGCGATGTGTGCGTATGCGAGGAGAACTAGTAAGCGTGAAGGAGAAGTCGTACCGTTAGAAAATGGATCTAATTCTGTGGATACACAAAACGACATCCAAACCCTAGAAAATGGATCTAGTTATGTGGAGAAACAAGAAAAGGTCAACGAAGATAAGACAAGTGAACTTCTTAGGAATAAAGTCATTGCTCAGATATTGGAACTAGGTATCGTAGTTCACTCGGTTGTGATCGGTCTTGCTATGGGGGCTTCTGATAACAAATGTACCGTACAATCACTCATCGCAGCGCTTTGTTTCCATCAACTCTTTGAAGGAATGGGACTCGGTGGTTCCATCTTACAAGCGCAATTTAAAAGCAAAACAAATTGGACAATGGTGTTTTTCTTTTCGGTCACAACACCATTTGGGATTGTTTTAGGGATGGCCATACAAAAGATATATGATGAGACAAGTCCAACTGCGTTGATCGTTGTGGGGGTCTTGAATGCGTGCTCTGCAGGATTGTTGATTTATATGGCCCTTGTTAATCTCTTGGCTCATGAATTCTTCGGACCAAAGATACAAGGGAATATTAAACTTCATGTCCTCGGTTATGTTGCTACCTTCACAGGTGCCGCAGGAATGTCTTTGATGGCTAAGTGGGCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000041 GO:0000302 GO:0003674 GO:0005215 GO:0005381 GO:0005385 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0005802 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006826 GO:0006829 GO:0006950 GO:0006979 GO:0008150 GO:0008324 GO:0009605 GO:0009607 GO:0009617 GO:0009719 GO:0009723 GO:0009725 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010039 GO:0012505 GO:0015075 GO:0015318 GO:0015675 GO:0015691 GO:0016020 GO:0022857 GO:0022890 GO:0030001 GO:0031410 GO:0031982 GO:0031984 GO:0032870 GO:0033554 GO:0034220 GO:0034599 GO:0034614 GO:0034755 GO:0035690 GO:0042221 GO:0042493 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0046873 GO:0046915 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0051716 GO:0055085 GO:0070838 GO:0070887 GO:0071241 GO:0071248 GO:0071281 GO:0071310 GO:0071369 GO:0071495 GO:0071577 GO:0071731 GO:0071732 GO:0071944 GO:0072509 GO:0072511 GO:0097366 GO:0097708 GO:0098655 GO:0098660 GO:0098662 GO:0098791 GO:1901698 GO:1901699 GO:1901700 GO:1901701 GO:1902170

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Zip

Protein Analysis

365

Amino Acids

39.38

Weight (kDa)

5.9

Isoelectric Point (pI)

42.01

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Zip	PF02535	54 - 362	3.1e-78	ZIP Zinc transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010761)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G04032
fragaria_vesca	FvH4_4g28790 FvH4_4g28790 FvH4_5g31650
malus_domestica	MD13G1054100.v1.1 MD15G1116800.v1.1 MD16G1052500.v1.1
prunus_persica	Prupe.1G298100_v2.0.a1
pyrus_communis	pycom13g04810 pycom15g10520
rosa_chinensis	RchiOBHm_Chr4g0436921
rosa_laevigata	RLG00000006486
rosa_multiflora	Rmu_sc0001464.1_g000008
rosa_roxburghii	Rroxscaffold_5G00377990
rosa_rugosa	Rorug04G0297400
rosa_samantha	Rh4AG351700 Rh4BG360700 Rh4CG375000 Rh4DG354900
rosa_wichuraiana	Rw4G030780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	24
AccB1I	GGYRCC	1 cut(s)	1061
AciI	CCGC	1 cut(s)	1065
AclWI	GGATC	2 cut(s)	523, 571
AcoI	YGGCCR	1 cut(s)	873
AcsI	RAATTY	1 cut(s)	992
AcuI	CTGAAG	1 cut(s)	390
AfaI	GTAC	3 cut(s)	501, 715, 720
AfeI	AGCGCT	1 cut(s)	738
AfiI	CCNNNNNNNGG	1 cut(s)	248
AgeI	ACCGGT	1 cut(s)	311
AgsI	TTSAA	3 cut(s)	443, 761, 934
AhlI	ACTAGT	1 cut(s)	476
AluBI	AGCT	3 cut(s)	116, 163, 290
AluI	AGCT	3 cut(s)	116, 163, 290
Alw21I	GWGCWC	1 cut(s)	944
Alw26I	GTCTC	1 cut(s)	890
AlwI	GGATC	2 cut(s)	523, 571
Aor51HI	AGCGCT	1 cut(s)	738
AoxI	GGCC	2 cut(s)	873, 966
ApeKI	GCWGC	1 cut(s)	734
ApoI	RAATTY	1 cut(s)	992
ArsI	GACNNNNNNTTYG	2 cut(s)	274, 306
AsiGI	ACCGGT	1 cut(s)	311
AspLEI	GCGC	2 cut(s)	739, 796
AspS9I	GGNCC	3 cut(s)	251, 967, 1001
AsuHPI	GGTGA	1 cut(s)	22
AvaII	GGWCC	2 cut(s)	251, 1001
BaeI	ACNNNNGTAYC	2 cut(s)	697, 730
BalI	TGGCCA	1 cut(s)	875
BanI	GGYRCC	1 cut(s)	1061
BbsI	GAAGAC	1 cut(s)	378
Bbv12I	GWGCWC	1 cut(s)	944
BbvI	GCAGC	1 cut(s)	746
BccI	CCATC	5 cut(s)	190, 756, 791, 865, 1075
BciVI	GTATCC	1 cut(s)	523
BcoDI	GTCTC	1 cut(s)	890
BcuI	ACTAGT	1 cut(s)	476
BfaI	CTAG	4 cut(s)	477, 554, 567, 653
BfmI	CTRYAG	1 cut(s)	945
BfoI	RGCGCY	1 cut(s)	740
BfuI	GTATCC	1 cut(s)	523
BglII	AGATCT	1 cut(s)	127
BisI	GCNGC	2 cut(s)	735, 1065
BlsI	GCNGC	2 cut(s)	736, 1066
Bme18I	GGWCC	2 cut(s)	251, 1001
BmgT120I	GGNCC	3 cut(s)	251, 967, 1001
BmiI	GGNNCC	3 cut(s)	253, 781, 1063
BpiI	GAAGAC	1 cut(s)	378
BpmI	CTGGAG	1 cut(s)	144
BsaJI	CCNNGG	2 cut(s)	377, 1036
BsaWI	WCCGGW	2 cut(s)	311, 331
BsaXI	ACNNNNNCTCC	4 cut(s)	463, 483, 493, 513
Bsc4I	CCNNNNNNNGG	1 cut(s)	248
Bse118I	RCCGGY	2 cut(s)	77, 311
Bse3DI	GCAATG	2 cut(s)	171, 633
BseDI	CCNNGG	2 cut(s)	377, 1036
BseGI	GGATG	3 cut(s)	353, 543, 876
BseLI	CCNNNNNNNGG	1 cut(s)	248
BseMI	GCAATG	2 cut(s)	171, 633
BseMII	CTCAG	1 cut(s)	653
BseRI	GAGGAG	1 cut(s)	484
BseXI	GCAGC	1 cut(s)	746
Bsh1285I	CGRYCG	1 cut(s)	259
BshFI	GGCC	2 cut(s)	875, 968
BshNI	GGYRCC	1 cut(s)	1061
BshTI	ACCGGT	1 cut(s)	311
BsiEI	CGRYCG	1 cut(s)	259
BsiHKAI	GWGCWC	1 cut(s)	944
BsiSI	CCGG	3 cut(s)	78, 312, 332
BslFI	GGGAC	1 cut(s)	783
BslI	CCNNNNNNNGG	1 cut(s)	248
BsmAI	GTCTC	1 cut(s)	890
BsmFI	GGGAC	1 cut(s)	783
BsmI	GAATGC	2 cut(s)	113, 940
BsnI	GGCC	2 cut(s)	875, 968
Bsp1286I	GDGCHC	1 cut(s)	944
BspACI	CCGC	1 cut(s)	1065
BspANI	GGCC	2 cut(s)	875, 968
BspCNI	CTCAG	1 cut(s)	652
BspHI	TCATGA	1 cut(s)	988
BspLI	GGNNCC	3 cut(s)	253, 781, 1063
BspMAI	CTGCAG	1 cut(s)	949
BspPI	GGATC	2 cut(s)	523, 571
BspT107I	GGYRCC	1 cut(s)	1061
BsrDI	GCAATG	2 cut(s)	171, 633
BsrFI	RCCGGY	2 cut(s)	77, 311
BssAI	RCCGGY	2 cut(s)	77, 311
BssECI	CCNNGG	2 cut(s)	377, 1036
Bst4CI	ACNGT	3 cut(s)	222, 504, 718
BstC8I	GCNNGC	2 cut(s)	199, 940
BstDEI	CTNAG	4 cut(s)	190, 620, 639, 1086
BstDSI	CCRYGG	1 cut(s)	377
BstENI	CCTNNNNNAGG	1 cut(s)	246
BstF5I	GGATG	3 cut(s)	353, 543, 876
BstH2I	RGCGCY	1 cut(s)	740
BstHHI	GCGC	2 cut(s)	739, 796
BstMAI	GTCTC	1 cut(s)	890
BstMCI	CGRYCG	1 cut(s)	259
BstMWI	GCNNNNNNNGC	6 cut(s)	83, 92, 458, 695, 944, 1091
BstNSI	RCATGY	2 cut(s)	21, 326
BstSFI	CTRYAG	1 cut(s)	945
BstV1I	GCAGC	1 cut(s)	746
BstV2I	GAAGAC	1 cut(s)	378
BstX2I	RGATCY	3 cut(s)	127, 515, 563
BstYI	RGATCY	3 cut(s)	127, 515, 563
BsuI	GTATCC	1 cut(s)	523
BsuRI	GGCC	2 cut(s)	875, 968
BtgI	CCRYGG	1 cut(s)	377
BtgZI	GCGATG	2 cut(s)	467, 715
BtsCI	GGATG	3 cut(s)	353, 543, 876
Cac8I	GCNNGC	2 cut(s)	199, 940
CciI	TCATGA	1 cut(s)	988
CfoI	GCGC	2 cut(s)	739, 796
Cfr10I	RCCGGY	2 cut(s)	77, 311
Cfr13I	GGNCC	3 cut(s)	251, 967, 1001
Csp6I	GTAC	3 cut(s)	500, 714, 719
CspAI	ACCGGT	1 cut(s)	311
CviAII	CATG	6 cut(s)	18, 135, 202, 323, 989, 1031
CviQI	GTAC	3 cut(s)	500, 714, 719
DdeI	CTNAG	4 cut(s)	190, 620, 639, 1086
DraI	TTTAAA	1 cut(s)	802
EaeI	YGGCCR	1 cut(s)	873
Eco47I	GGWCC	2 cut(s)	251, 1001
Eco47III	AGCGCT	1 cut(s)	738
Eco57I	CTGAAG	1 cut(s)	390
EcoNI	CCTNNNNNAGG	1 cut(s)	246
EcoO109I	RGGNCCY	1 cut(s)	251
EcoRI	GAATTC	1 cut(s)	992
EcoT22I	ATGCAT	1 cut(s)	324
FaeI	CATG	6 cut(s)	21, 138, 205, 326, 992, 1034
FaqI	GGGAC	1 cut(s)	783
FatI	CATG	6 cut(s)	17, 134, 201, 322, 988, 1030
Fnu4HI	GCNGC	2 cut(s)	735, 1065
FokI	GGATG	3 cut(s)	340, 530, 883
Fsp4HI	GCNGC	2 cut(s)	735, 1065
FspBI	CTAG	4 cut(s)	477, 554, 567, 653
GlaI	GCGC	2 cut(s)	738, 795
GluI	GCNGC	2 cut(s)	735, 1065
GsuI	CTGGAG	1 cut(s)	144
HaeII	RGCGCY	1 cut(s)	740
HaeIII	GGCC	2 cut(s)	875, 968
HapII	CCGG	3 cut(s)	78, 312, 332
HhaI	GCGC	2 cut(s)	739, 796
Hin1II	CATG	6 cut(s)	21, 138, 205, 326, 992, 1034
Hin6I	GCGC	2 cut(s)	737, 794
HinP1I	GCGC	2 cut(s)	737, 794
HincII	GTYRAC	1 cut(s)	595
HindII	GTYRAC	1 cut(s)	595
HindIII	AAGCTT	1 cut(s)	161
HinfI	GANTC	4 cut(s)	119, 335, 443, 771
HpaII	CCGG	3 cut(s)	78, 312, 332
HphI	GGTGA	1 cut(s)	22
Hpy166II	GTNNAC	3 cut(s)	595, 614, 667
Hpy188I	TCNGA	3 cut(s)	642, 703, 1001
Hpy188III	TCNNGA	5 cut(s)	123, 260, 409, 931, 989
Hpy8I	GTNNAC	3 cut(s)	595, 614, 667
HpyAV	CCTTC	4 cut(s)	67, 482, 755, 1063
HpyCH4III	ACNGT	3 cut(s)	222, 504, 718
HpyCH4V	TGCA	4 cut(s)	111, 176, 322, 947
HpyF10VI	GCNNNNNNNGC	6 cut(s)	83, 92, 458, 695, 944, 1091
HpyF3I	CTNAG	4 cut(s)	190, 620, 639, 1086
Hsp92II	CATG	6 cut(s)	21, 138, 205, 326, 992, 1034
HspAI	GCGC	2 cut(s)	737, 794
Lsp1109I	GCAGC	1 cut(s)	746
MaeI	CTAG	4 cut(s)	477, 554, 567, 653
MaeIII	GTNAC	4 cut(s)	80, 137, 327, 841
MboII	GAAGA	5 cut(s)	38, 41, 383, 611, 988
MflI	RGATCY	3 cut(s)	127, 515, 563
MhlI	GDGCHC	1 cut(s)	944
MlsI	TGGCCA	1 cut(s)	875
MluCI	AATT	6 cut(s)	42, 300, 520, 797, 814, 992
MluNI	TGGCCA	1 cut(s)	875
MlyI	GAGTC	2 cut(s)	329, 765
MmeI	TCCRAC	1 cut(s)	929
MnlI	CCTC	3 cut(s)	79, 462, 1046
Mox20I	TGGCCA	1 cut(s)	875
Mph1103I	ATGCAT	1 cut(s)	324
MscI	TGGCCA	1 cut(s)	875
MseI	TTAA	6 cut(s)	165, 279, 434, 801, 975, 1023
MslI	CAYNNNNRTG	2 cut(s)	358, 410
Msp20I	TGGCCA	1 cut(s)	875
MspI	CCGG	3 cut(s)	78, 312, 332
Mva1269I	GAATGC	2 cut(s)	113, 940
MwoI	GCNNNNNNNGC	6 cut(s)	83, 92, 458, 695, 944, 1091
NlaIII	CATG	6 cut(s)	21, 138, 205, 326, 992, 1034
NlaIV	GGNNCC	3 cut(s)	253, 781, 1063
NmeAIII	GCCGAG	1 cut(s)	398
NmuCI	GTSAC	2 cut(s)	137, 841
NsiI	ATGCAT	1 cut(s)	324
NspI	RCATGY	2 cut(s)	21, 326
PagI	TCATGA	1 cut(s)	988
PctI	GAATGC	2 cut(s)	113, 940
PfeI	GAWTC	2 cut(s)	119, 443
PinAI	ACCGGT	1 cut(s)	311
PkrI	GCNGC	2 cut(s)	736, 1066
Ple19I	CGATCG	1 cut(s)	259
PleI	GAGTC	2 cut(s)	329, 765
PpsI	GAGTC	2 cut(s)	329, 765
PpuMI	RGGWCCY	1 cut(s)	251
PsiI	TTATAA	1 cut(s)	24
Psp5II	RGGWCCY	1 cut(s)	251
PspN4I	GGNNCC	3 cut(s)	253, 781, 1063
PspPI	GGNCC	3 cut(s)	251, 967, 1001
PspPPI	RGGWCCY	1 cut(s)	251
PstI	CTGCAG	1 cut(s)	949
PsuI	RGATCY	3 cut(s)	127, 515, 563
PvuI	CGATCG	1 cut(s)	259
RsaI	GTAC	3 cut(s)	501, 715, 720
RsaNI	GTAC	3 cut(s)	500, 714, 719
RseI	CAYNNNNRTG	2 cut(s)	358, 410
SaqAI	TTAA	6 cut(s)	165, 279, 434, 801, 975, 1023
SatI	GCNGC	2 cut(s)	735, 1065
Sau96I	GGNCC	3 cut(s)	251, 967, 1001
SchI	GAGTC	2 cut(s)	329, 765
SduI	GDGCHC	1 cut(s)	944
SetI	ASST	7 cut(s)	118, 165, 292, 594, 658, 1055, 1063
SfcI	CTRYAG	1 cut(s)	945
SinI	GGWCC	2 cut(s)	251, 1001
SmiMI	CAYNNNNRTG	2 cut(s)	358, 410
SpeI	ACTAGT	1 cut(s)	476
Sse9I	AATT	6 cut(s)	42, 300, 520, 797, 814, 992
SsiI	CCGC	1 cut(s)	1065
SspI	AATATT	1 cut(s)	1021
SspMI	CTAG	4 cut(s)	477, 554, 567, 653
TaaI	ACNGT	3 cut(s)	222, 504, 718
TaqI	TCGA	2 cut(s)	259, 342
TaqII	GACCGA	2 cut(s)	671, 829
TasI	AATT	6 cut(s)	42, 300, 520, 797, 814, 992
TauI	GCSGC	1 cut(s)	1067
TfiI	GAWTC	2 cut(s)	119, 443
Tru1I	TTAA	6 cut(s)	165, 279, 434, 801, 975, 1023
Tru9I	TTAA	6 cut(s)	165, 279, 434, 801, 975, 1023
TseFI	GTSAC	2 cut(s)	137, 841
TseI	GCWGC	1 cut(s)	734
Tsp45I	GTSAC	2 cut(s)	137, 841
TspDTI	ATGAA	3 cut(s)	394, 1005, 1019
VpaK11BI	GGWCC	2 cut(s)	251, 1001
XagI	CCTNNNNNAGG	1 cut(s)	246
XapI	RAATTY	1 cut(s)	992
XceI	RCATGY	2 cut(s)	21, 326
XspI	CTAG	4 cut(s)	477, 554, 567, 653
Zsp2I	ATGCAT	1 cut(s)	324

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.