Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0010761

Physical Location & Seq

Genomic Coordinates Forward (+)

29402963 .. 29404528

Gene Structure 1566 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G298100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1086 bp

ATGGCTTCTTCCAAGCTCCATGCCCTCACCGTCCTCATCATCCTCATCAGCATAGCGGTCAATGCAGCTGCAGTAGCGGTACAGGACCAATCAGAGCAATGTGGGGCCAAATCAAAAGGAGCGTGCCATGACAAAGCACAAGCACTGAAATTGAAGCTCATTGCCATAGCTTCCATTTTGGTCTTTAGCTTGATCGGCGTCTGCCTGCCACTATTTTCACGCTCAGTTCCGGCTCTCCAGCCCGACAAGGACTTGTTCTCCATCGTCAAAGCTTTAGCCTCCGGTGTCATACTCGCGACGGGGTACATGCACGTGCTGCCAGACTCGTTTGAGTGCTTGACGTCGGTGTGTTTGCCCGAAAAGCCGTGGAAAAAGTTCCCGTTCACGACGTTCGTGGCCATGCTTTCGGCCGTGCTGACTCTCATGGTGGACTCATTTTCTATGAGCCATTATAGGAAAGCTTTCGCTGCAGGTACTCGCAGTGGAGATGAGGAGAATGACAAAAATGTTACCCCTCAATTGGAACATGTTGGTCATGGTCATGGCCATGGCCACGTCCAGGACACTAAGATTGAGGGTGGACTCAATGGCAAGGACTCACAGTTGCTGAGATATCGTGTTGTGGCACAGGTATTGGAACTAGGCATTGTGGTGCACTCAGTGGTGATTGGGCTGTCAATGGGAGCATCAGACAATCCTTGCACAATCAGACCACTCATTGCTGCCCTCTGTTTCCATCAACTCTTTGAAGGAATGGGTCTAGGTGGATGCATACTGCAGGCTGAATATGGATTGAAGATAAAATCAGTCATGGTGTTCTTCTTCTCAGTCACAACACCATTTGGTATAGCGCTAGGAATTGGTTTGTCAAATGTATACAGTGAGGACAGCCCAACAGCCCTAATTGTGGTAGGGCTGCTGAATGCTGCATCTGCAGGGCTGCTGAACTACATGGCTCTGGTGGATCTGCTAGCAGCTGATTTCATGGGTCCTAAATTGCAAGCCAAACCCAAGCTCCAAATGTGGTCTTACCTTGCAGTTTTTTTAGGCCTAGGAGGAATGTCAGTCATGGCCTTGTGGGCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000041 GO:0003674 GO:0005215 GO:0005385 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006826 GO:0006829 GO:0008150 GO:0008324 GO:0015075 GO:0015318 GO:0015691 GO:0016020 GO:0022857 GO:0022890 GO:0030001 GO:0034220 GO:0044464 GO:0046873 GO:0046915 GO:0051179 GO:0051234 GO:0055085 GO:0070838 GO:0071577 GO:0071944 GO:0072509 GO:0072511 GO:0098655 GO:0098660 GO:0098662

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Zip

Protein Analysis

362

Amino Acids

38.39

Weight (kDa)

7.63

Isoelectric Point (pI)

38.68

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010761)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G04032
fragaria_vesca	FvH4_4g28790 FvH4_4g28790 FvH4_5g31650
malus_domestica	MD13G1054100.v1.1 MD15G1116800.v1.1 MD16G1052500.v1.1
prunus_persica	Prupe.1G298100_v2.0.a1
pyrus_communis	pycom13g04810 pycom15g10520
rosa_chinensis	RchiOBHm_Chr4g0436921
rosa_laevigata	RLG00000006486
rosa_multiflora	Rmu_sc0001464.1_g000008
rosa_roxburghii	Rroxscaffold_5G00377990
rosa_rugosa	Rorug04G0297400
rosa_samantha	Rh4AG351700 Rh4BG360700 Rh4CG375000 Rh4DG354900
rosa_wichuraiana	Rw4G030780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	344
Acc36I	ACCTGC	1 cut(s)	461
AccI	GTMKAC	1 cut(s)	876
AccII	CGCG	1 cut(s)	296
AciI	CCGC	2 cut(s)	56, 77
AclWI	GGATC	1 cut(s)	972
AcoI	YGGCCR	4 cut(s)	396, 408, 544, 550
AcvI	CACGTG	1 cut(s)	313
AcyI	GRCGYC	2 cut(s)	198, 341
AdeI	CACNNNGTG	1 cut(s)	661
AfaI	GTAC	3 cut(s)	81, 305, 475
AfeI	AGCGCT	1 cut(s)	852
AfiI	CCNNNNNNNGG	3 cut(s)	520, 559, 907
AflIII	ACRYGT	1 cut(s)	526
AgsI	TTSAA	3 cut(s)	154, 749, 796
AjiI	CACGTC	1 cut(s)	556
AjnI	CCWGG	1 cut(s)	558
AluBI	AGCT	9 cut(s)	16, 68, 157, 170, 189, 272, 461, 977, 1015
AluI	AGCT	9 cut(s)	16, 68, 157, 170, 189, 272, 461, 977, 1015
Alw21I	GWGCWC	1 cut(s)	657
Alw44I	GTGCAC	1 cut(s)	653
AlwI	GGATC	1 cut(s)	972
AlwNI	CAGNNNCTG	1 cut(s)	607
Aor51HI	AGCGCT	1 cut(s)	852
AoxI	GGCC	7 cut(s)	105, 396, 408, 544, 550, 1048, 1071
ApaLI	GTGCAC	1 cut(s)	653
ApeKI	GCWGC	9 cut(s)	65, 68, 316, 467, 722, 916, 926, 940, 974
Asp700I	GAANNNNTTC	2 cut(s)	374, 461
AspA2I	CCTAGG	1 cut(s)	1051
AspLEI	GCGC	1 cut(s)	853
AspS9I	GGNCC	3 cut(s)	85, 105, 989
AsuHPI	GGTGA	2 cut(s)	19, 676
AsuNHI	GCTAGC	1 cut(s)	970
AvaII	GGWCC	2 cut(s)	85, 989
AvrII	CCTAGG	1 cut(s)	1051
BaeGI	GKGCMC	1 cut(s)	657
BalI	TGGCCA	3 cut(s)	398, 546, 552
BbrPI	CACGTG	1 cut(s)	313
Bbv12I	GWGCWC	1 cut(s)	657
BbvI	GCAGC	9 cut(s)	55, 77, 303, 454, 709, 903, 913, 927, 986
BccI	CCATC	2 cut(s)	269, 744
BceAI	ACGGC	2 cut(s)	349, 395
BciT130I	CCWGG	1 cut(s)	560
BfaI	CTAG	5 cut(s)	641, 761, 854, 971, 1052
BfmI	CTRYAG	4 cut(s)	69, 468, 776, 933
BfoI	RGCGCY	1 cut(s)	854
BfuAI	ACCTGC	1 cut(s)	461
BglI	GCCNNNNNGGC	1 cut(s)	1079
BisI	GCNGC	9 cut(s)	66, 69, 317, 468, 723, 917, 927, 941, 975
BlnI	CCTAGG	1 cut(s)	1051
BlsI	GCNGC	9 cut(s)	67, 70, 318, 469, 724, 918, 928, 942, 976
Bme1390I	CCNGG	1 cut(s)	560
Bme18I	GGWCC	2 cut(s)	85, 989
BmgBI	CACGTC	1 cut(s)	556
BmgT120I	GGNCC	3 cut(s)	85, 105, 989
BmiI	GGNNCC	2 cut(s)	106, 990
BmrFI	CCNGG	1 cut(s)	560
BmsI	GCATC	3 cut(s)	695, 758, 938
BmtI	GCTAGC	1 cut(s)	974
BpmI	CTGGAG	1 cut(s)	221
BsaAI	YACGTR	1 cut(s)	313
BsaHI	GRCGYC	2 cut(s)	198, 341
BsaJI	CCNNGG	3 cut(s)	365, 547, 1051
BsaWI	WCCGGW	1 cut(s)	281
BsaXI	ACNNNNNCTCC	4 cut(s)	242, 272, 999, 1029
Bsc4I	CCNNNNNNNGG	3 cut(s)	520, 559, 907
Bse3DI	GCAATG	3 cut(s)	104, 159, 717
BseBI	CCWGG	1 cut(s)	560
BseDI	CCNNGG	3 cut(s)	365, 547, 1051
BseGI	GGATG	2 cut(s)	39, 773
BseLI	CCNNNNNNNGG	3 cut(s)	520, 559, 907
BseMI	GCAATG	3 cut(s)	104, 159, 717
BseMII	CTCAG	4 cut(s)	237, 599, 672, 840
BseRI	GAGGAG	1 cut(s)	506
BseSI	GKGCMC	1 cut(s)	657
BseX3I	CGGCCG	1 cut(s)	408
BseXI	GCAGC	9 cut(s)	55, 77, 303, 454, 709, 903, 913, 927, 986
Bsh1236I	CGCG	1 cut(s)	296
Bsh1285I	CGRYCG	1 cut(s)	411
BshFI	GGCC	7 cut(s)	107, 398, 410, 546, 552, 1050, 1073
BsiEI	CGRYCG	1 cut(s)	411
BsiHKAI	GWGCWC	1 cut(s)	657
BsiSI	CCGG	2 cut(s)	230, 282
BslI	CCNNNNNNNGG	3 cut(s)	520, 559, 907
BsmI	GAATGC	1 cut(s)	928
BsnI	GGCC	7 cut(s)	107, 398, 410, 546, 552, 1050, 1073
Bsp1286I	GDGCHC	1 cut(s)	657
Bsp143I	GATC	2 cut(s)	192, 964
Bsp19I	CCATGG	1 cut(s)	547
Bsp68I	TCGCGA	1 cut(s)	296
BspACI	CCGC	2 cut(s)	56, 77
BspANI	GGCC	7 cut(s)	107, 398, 410, 546, 552, 1050, 1073
BspCNI	CTCAG	4 cut(s)	236, 600, 671, 839
BspFNI	CGCG	1 cut(s)	296
BspLI	GGNNCC	2 cut(s)	106, 990
BspMAI	CTGCAG	4 cut(s)	73, 472, 780, 937
BspMI	ACCTGC	1 cut(s)	461
BspOI	GCTAGC	1 cut(s)	974
BspPI	GGATC	1 cut(s)	972
BsrDI	GCAATG	3 cut(s)	104, 159, 717
BssECI	CCNNGG	3 cut(s)	365, 547, 1051
BssMI	GATC	2 cut(s)	192, 964
BssNAI	GTATAC	1 cut(s)	877
BssNI	GRCGYC	2 cut(s)	198, 341
BssT1I	CCWWGG	2 cut(s)	547, 1051
Bst1107I	GTATAC	1 cut(s)	877
Bst2UI	CCWGG	1 cut(s)	560
Bst4CI	ACNGT	3 cut(s)	31, 603, 881
BstACI	GRCGYC	2 cut(s)	198, 341
BstAPI	GCANNNNNTGC	1 cut(s)	316
BstBAI	YACGTR	1 cut(s)	313
BstC8I	GCNNGC	5 cut(s)	124, 206, 780, 972, 1002
BstDEI	CTNAG	5 cut(s)	223, 567, 608, 658, 826
BstDSI	CCRYGG	2 cut(s)	365, 547
BstF5I	GGATG	2 cut(s)	39, 773
BstFNI	CGCG	1 cut(s)	296
BstH2I	RGCGCY	1 cut(s)	854
BstHHI	GCGC	1 cut(s)	853
BstKTI	GATC	2 cut(s)	195, 967
BstMBI	GATC	2 cut(s)	192, 964
BstMCI	CGRYCG	1 cut(s)	411
BstMWI	GCNNNNNNNGC	8 cut(s)	62, 74, 195, 316, 361, 467, 932, 1079
BstNI	CCWGG	1 cut(s)	560
BstNSI	RCATGY	2 cut(s)	310, 530
BstSCI	CCNGG	1 cut(s)	558
BstSFI	CTRYAG	4 cut(s)	69, 468, 776, 933
BstSLI	GKGCMC	1 cut(s)	657
BstUI	CGCG	1 cut(s)	296
BstV1I	GCAGC	9 cut(s)	55, 77, 303, 454, 709, 903, 913, 927, 986
BstX2I	RGATCY	1 cut(s)	964
BstYI	RGATCY	1 cut(s)	964
BstZ17I	GTATAC	1 cut(s)	877
BstZI	CGGCCG	1 cut(s)	408
BsuRI	GGCC	7 cut(s)	107, 398, 410, 546, 552, 1050, 1073
BtgI	CCRYGG	2 cut(s)	365, 547
BtrI	CACGTC	1 cut(s)	556
BtsCI	GGATG	2 cut(s)	39, 773
BtsI	GCAGTG	1 cut(s)	487
BtsIMutI	CAGTG	4 cut(s)	143, 487, 666, 886
BtuMI	TCGCGA	1 cut(s)	296
BveI	ACCTGC	1 cut(s)	461
Cac8I	GCNNGC	5 cut(s)	124, 206, 780, 972, 1002
CaiI	CAGNNNCTG	1 cut(s)	607
CfoI	GCGC	1 cut(s)	853
Cfr13I	GGNCC	3 cut(s)	85, 105, 989
CseI	GACGC	1 cut(s)	187
Csp6I	GTAC	3 cut(s)	80, 304, 474
CviQI	GTAC	3 cut(s)	80, 304, 474
DdeI	CTNAG	5 cut(s)	223, 567, 608, 658, 826
DpnI	GATC	2 cut(s)	194, 966
DpnII	GATC	2 cut(s)	192, 964
DraIII	CACNNNGTG	1 cut(s)	661
EaeI	YGGCCR	4 cut(s)	396, 408, 544, 550
EagI	CGGCCG	1 cut(s)	408
EclXI	CGGCCG	1 cut(s)	408
Eco130I	CCWWGG	2 cut(s)	547, 1051
Eco147I	AGGCCT	1 cut(s)	1050
Eco32I	GATATC	1 cut(s)	614
Eco47I	GGWCC	2 cut(s)	85, 989
Eco47III	AGCGCT	1 cut(s)	852
Eco52I	CGGCCG	1 cut(s)	408
Eco72I	CACGTG	1 cut(s)	313
EcoO109I	RGGNCCY	1 cut(s)	989
EcoRII	CCWGG	1 cut(s)	558
EcoRV	GATATC	1 cut(s)	614
EcoT14I	CCWWGG	2 cut(s)	547, 1051
EcoT22I	ATGCAT	1 cut(s)	773
ErhI	CCWWGG	2 cut(s)	547, 1051
FblI	GTMKAC	1 cut(s)	876
Fnu4HI	GCNGC	9 cut(s)	66, 69, 317, 468, 723, 917, 927, 941, 975
FokI	GGATG	2 cut(s)	26, 780
Fsp4HI	GCNGC	9 cut(s)	66, 69, 317, 468, 723, 917, 927, 941, 975
FspBI	CTAG	5 cut(s)	641, 761, 854, 971, 1052
GlaI	GCGC	1 cut(s)	852
GluI	GCNGC	9 cut(s)	66, 69, 317, 468, 723, 917, 927, 941, 975
GsuI	CTGGAG	1 cut(s)	221
HaeII	RGCGCY	1 cut(s)	854
HaeIII	GGCC	7 cut(s)	107, 398, 410, 546, 552, 1050, 1073
HapII	CCGG	2 cut(s)	230, 282
HgaI	GACGC	1 cut(s)	187
HhaI	GCGC	1 cut(s)	853
Hin1I	GRCGYC	2 cut(s)	198, 341
Hin6I	GCGC	1 cut(s)	851
HinP1I	GCGC	1 cut(s)	851
HindIII	AAGCTT	2 cut(s)	270, 459
HinfI	GANTC	5 cut(s)	323, 418, 431, 582, 596
HpaII	CCGG	2 cut(s)	230, 282
HphI	GGTGA	2 cut(s)	19, 676
Hpy166II	GTNNAC	5 cut(s)	384, 430, 581, 655, 877
Hpy188I	TCNGA	3 cut(s)	94, 691, 710
Hpy188III	TCNNGA	2 cut(s)	295, 385
Hpy8I	GTNNAC	5 cut(s)	384, 430, 581, 655, 877
Hpy99I	CGWCG	3 cut(s)	301, 346, 391
HpyAV	CCTTC	1 cut(s)	743
HpyCH4III	ACNGT	3 cut(s)	31, 603, 881
HpyCH4IV	ACGT	4 cut(s)	312, 341, 389, 555
HpyF10VI	GCNNNNNNNGC	8 cut(s)	62, 74, 195, 316, 361, 467, 932, 1079
HpyF3I	CTNAG	5 cut(s)	223, 567, 608, 658, 826
HpySE526I	ACGT	4 cut(s)	312, 341, 389, 555
Hsp92I	GRCGYC	2 cut(s)	198, 341
HspAI	GCGC	1 cut(s)	851
Kzo9I	GATC	2 cut(s)	192, 964
LmnI	GCTCC	4 cut(s)	21, 119, 683, 1020
Lsp1109I	GCAGC	9 cut(s)	55, 77, 303, 454, 709, 903, 913, 927, 986
LweI	GCATC	3 cut(s)	695, 758, 938
MaeI	CTAG	5 cut(s)	641, 761, 854, 971, 1052
MaeII	ACGT	4 cut(s)	312, 341, 389, 555
MaeIII	GTNAC	2 cut(s)	508, 829
MalI	GATC	2 cut(s)	194, 966
MboI	GATC	2 cut(s)	192, 964
MboII	GAAGA	3 cut(s)	808, 811, 814
MfeI	CAATTG	1 cut(s)	518
MflI	RGATCY	1 cut(s)	964
MhlI	GDGCHC	1 cut(s)	657
MlsI	TGGCCA	3 cut(s)	398, 546, 552
MluCI	AATT	5 cut(s)	149, 518, 858, 903, 995
MluNI	TGGCCA	3 cut(s)	398, 546, 552
MlyI	GAGTC	5 cut(s)	317, 412, 425, 576, 590
Mox20I	TGGCCA	3 cut(s)	398, 546, 552
Mph1103I	ATGCAT	1 cut(s)	773
MroXI	GAANNNNTTC	2 cut(s)	374, 461
MscI	TGGCCA	3 cut(s)	398, 546, 552
MslI	CAYNNNNRTG	4 cut(s)	311, 540, 546, 650
Msp20I	TGGCCA	3 cut(s)	398, 546, 552
MspA1I	CMGCKG	2 cut(s)	68, 977
MspI	CCGG	2 cut(s)	230, 282
MspR9I	CCNGG	1 cut(s)	560
MunI	CAATTG	1 cut(s)	518
Mva1269I	GAATGC	1 cut(s)	928
MvaI	CCWGG	1 cut(s)	560
MvnI	CGCG	1 cut(s)	296
MwoI	GCNNNNNNNGC	8 cut(s)	62, 74, 195, 316, 361, 467, 932, 1079
NcoI	CCATGG	1 cut(s)	547
NdeII	GATC	2 cut(s)	192, 964
NheI	GCTAGC	1 cut(s)	970
NlaIV	GGNNCC	2 cut(s)	106, 990
NmuCI	GTSAC	1 cut(s)	829
NruI	TCGCGA	1 cut(s)	296
NsiI	ATGCAT	1 cut(s)	773
NspI	RCATGY	2 cut(s)	310, 530
PceI	AGGCCT	1 cut(s)	1050
PciI	ACATGT	1 cut(s)	526
PctI	GAATGC	1 cut(s)	928
PdmI	GAANNNNTTC	2 cut(s)	374, 461
PfoI	TCCNGGA	1 cut(s)	558
PkrI	GCNGC	9 cut(s)	67, 70, 318, 469, 724, 918, 928, 942, 976
PleI	GAGTC	5 cut(s)	317, 412, 425, 576, 590
PmaCI	CACGTG	1 cut(s)	313
PmlI	CACGTG	1 cut(s)	313
PpsI	GAGTC	5 cut(s)	317, 412, 425, 576, 590
Ppu21I	YACGTR	1 cut(s)	313
PpuMI	RGGWCCY	1 cut(s)	989
PscI	ACATGT	1 cut(s)	526
Psp5II	RGGWCCY	1 cut(s)	989
Psp6I	CCWGG	1 cut(s)	558
PspCI	CACGTG	1 cut(s)	313
PspGI	CCWGG	1 cut(s)	558
PspN4I	GGNNCC	2 cut(s)	106, 990
PspPI	GGNCC	3 cut(s)	85, 105, 989
PspPPI	RGGWCCY	1 cut(s)	989
PstI	CTGCAG	4 cut(s)	73, 472, 780, 937
PstNI	CAGNNNCTG	1 cut(s)	607
PsuI	RGATCY	1 cut(s)	964
PvuII	CAGCTG	2 cut(s)	68, 977
RruI	TCGCGA	1 cut(s)	296
RsaI	GTAC	3 cut(s)	81, 305, 475
RsaNI	GTAC	3 cut(s)	80, 304, 474
RseI	CAYNNNNRTG	4 cut(s)	311, 540, 546, 650
SatI	GCNGC	9 cut(s)	66, 69, 317, 468, 723, 917, 927, 941, 975
Sau3AI	GATC	2 cut(s)	192, 964
Sau96I	GGNCC	3 cut(s)	85, 105, 989
SchI	GAGTC	5 cut(s)	317, 412, 425, 576, 590
ScrFI	CCNGG	1 cut(s)	560
SduI	GDGCHC	1 cut(s)	657
SfaNI	GCATC	3 cut(s)	695, 758, 938
SfcI	CTRYAG	4 cut(s)	69, 468, 776, 933
SinI	GGWCC	2 cut(s)	85, 989
SmiMI	CAYNNNNRTG	4 cut(s)	311, 540, 546, 650
Sse9I	AATT	5 cut(s)	149, 518, 858, 903, 995
SseBI	AGGCCT	1 cut(s)	1050
SsiI	CCGC	2 cut(s)	56, 77
SspMI	CTAG	5 cut(s)	641, 761, 854, 971, 1052
StuI	AGGCCT	1 cut(s)	1050
StyD4I	CCNGG	1 cut(s)	558
StyI	CCWWGG	2 cut(s)	547, 1051
TaaI	ACNGT	3 cut(s)	31, 603, 881
TaiI	ACGT	4 cut(s)	315, 344, 392, 558
TasI	AATT	5 cut(s)	149, 518, 858, 903, 995
TscAI	CASTG	4 cut(s)	150, 487, 666, 886
TseFI	GTSAC	1 cut(s)	829
TseI	GCWGC	9 cut(s)	65, 68, 316, 467, 722, 916, 926, 940, 974
Tsp45I	GTSAC	1 cut(s)	829
TspDTI	ATGAA	1 cut(s)	973
TspRI	CASTG	4 cut(s)	150, 487, 666, 886
VneI	GTGCAC	1 cut(s)	653
VpaK11BI	GGWCC	2 cut(s)	85, 989
XceI	RCATGY	2 cut(s)	310, 530
XmaJI	CCTAGG	1 cut(s)	1051
XmiI	GTMKAC	1 cut(s)	876
XmnI	GAANNNNTTC	2 cut(s)	374, 461
XspI	CTAG	5 cut(s)	641, 761, 854, 971, 1052
ZraI	GACGTC	1 cut(s)	342
Zsp2I	ATGCAT	1 cut(s)	773

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.