AT2G04305

CorA-like Mg2+ transporter protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
OG0007265
Physical Location & Seq
Reverse (-)
1501372 .. 1503827
2456 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G04305.1

Sequence Viewer

Length: 1305 bp
ATGATGCAGCAGCAAGATCGAATTGGTGATGAAACAGATCTTGAGTCTTTCACAAGTAGTGTTCCTAGTAGAGACGCTTCTCATAGGTTTAGTTCTCATCAGTTCTCAGGAATGGTTAGACAAAGAGCTTATATATTTGATGGTGATGGTAAATACTATAACAAAGAATGGGATCTTGCTGAAGGAACAGGGAAAGAGTTTTGTTGGTATCATGTTGAATTACCTAAAGGAAATCAGAAGCTTTCTCAATCTGCTCAGCATTTGATTGATGCTTTATGCCCACCATTGAAGCTTCAGGACATTCTTGCTCTTGCTAGTAATGGACCCTTTTGTGGGCATGTTGATGGAGCGCTTGTCTTTAGAGTTAATTCTCCTGGTCCTGCTTCTAGTAGTAATACGTTTAAGATTGCTGCGAGGATTACTGAGAACTCTGTGATCACTGTTTCTTTAGGACGAGTTCCTAGGTTAGGTTTCTCGCCTATGGGTCAATCGCTTCTCTCGGAAGTTCCTAGTGTGATTGAGGAGCATGTTCTTGAGTTCTTGTTGAAAATGAACCATTCTGAGGAAGCTGATAACCCTGTGCCAACTTCTGTTTCGAATCTTGTTGTGCATATTATTGACACACATGTTGATCGACTTCAAGATGTTGTTACTGAACTTGAGATCGAATTGGATGGGGTGGAGCTAGAAATGGATAGAGGTGGATTTGCTATGAAGAAAAAGATGTTGGATGATAGAAGGTTCCCGAAATTGCATCTCAACTTGCAGCGTCTATTGCAGGTGATTGCGCATGGAGAACAAGTATTTCCAAGAGTGAAAGAAAAATGTTCCACGAAGCCTTGGTTTCTGGCAGAAGACATCCACTCGTTGGAAGAGTTGATTGGGAGGTTAAGACGTTTAAAAGAGAATGTAGGCTTCATTGCGAACCGTGTGACTGCAATCCAAGCTGGGTTGGATAGCTGGCAAGCCGAACAAATCAACCGAAAGCTCTATTACCTCTCCTTTCTTTCCATCATATTCCTTCCTCTATCAATTATAACCGGAGTTTTTGGGATGAATGTTGGAGGAGTACCTTGGACGGGACAAGACAAACCGGAGCTAAGAGACGGATTCAGAAATGTGATGTACATCTGTTTGATAATGCTGGTTCTAGTGTTGTGCTGCTTCGGCTTTCCAGCGTTATATAGTCGCATAGCGTCTTGGTGGGGAACGAGAGATATGAAAAGAAGTTGGTCTCTTAACAGAAGATCGTTTAAGAAGATACCAAACATAGTCCAAGAAAGAAAAGGCTACCTTAGGCTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
CorA

Protein Analysis

434

Amino Acids

49.28

Weight (kDa)

7.66

Isoelectric Point (pI)

44.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CorA PF01544 65 - 386 2.1e-28 CorA-like Mg2+ transporter protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1037
AarI CACCTGC 1 cut(s) 769
Acc16I TGCGCA 1 cut(s) 789
Acc36I ACCTGC 1 cut(s) 769
AccB7I CCANNNNNTGG 1 cut(s) 868
AclWI GGATC 1 cut(s) 180
AcuI CTGAAG 2 cut(s) 201, 278
AfaI GTAC 2 cut(s) 1071, 1127
AfeI AGCGCT 1 cut(s) 351
AfiI CCNNNNNNNGG 6 cut(s) 332, 333, 467, 562, 868, 1079
AflIII ACRYGT 1 cut(s) 625
AgsI TTSAA 4 cut(s) 218, 289, 547, 641
AjnI CCWGG 1 cut(s) 373
AjuI GAANNNNNNNTTGG 6 cut(s) 577, 609, 710, 742, 864, 896
AluBI AGCT 9 cut(s) 128, 241, 292, 569, 685, 947, 960, 988, 1099
AluI AGCT 9 cut(s) 128, 241, 292, 569, 685, 947, 960, 988, 1099
Alw26I GTCTC 3 cut(s) 66, 1098, 1239
AlwI GGATC 1 cut(s) 180
Aor51HI AGCGCT 1 cut(s) 351
ApeKI GCWGC 5 cut(s) 7, 10, 410, 766, 1161
AspA2I CCTAGG 1 cut(s) 461
AspLEI GCGC 2 cut(s) 352, 790
AspS9I GGNCC 2 cut(s) 323, 377
AsuHPI GGTGA 3 cut(s) 38, 155, 793
AsuII TTCGAA 1 cut(s) 596
AvaII GGWCC 2 cut(s) 323, 377
AvrII CCTAGG 1 cut(s) 461
AxyI CCTNAGG 1 cut(s) 1295
BarI GAAGNNNNNNTAC 2 cut(s) 61, 93
BbsI GAAGAC 1 cut(s) 861
BbvI GCAGC 5 cut(s) 19, 22, 397, 778, 1148
BccI CCATC 5 cut(s) 134, 140, 338, 668, 1019
BcgI CGANNNNNNTGC 1 cut(s) 33
BciT130I CCWGG 1 cut(s) 375
BclI TGATCA 1 cut(s) 435
BcoDI GTCTC 3 cut(s) 66, 1098, 1239
BfaI CTAG 7 cut(s) 66, 315, 387, 462, 510, 686, 1151
BfoI RGCGCY 1 cut(s) 353
BfuAI ACCTGC 1 cut(s) 769
BglII AGATCT 1 cut(s) 37
BisI GCNGC 5 cut(s) 8, 11, 411, 767, 1162
BlnI CCTAGG 1 cut(s) 461
BlpI GCTNAGC 1 cut(s) 255
BlsI GCNGC 5 cut(s) 9, 12, 412, 768, 1163
Bme1390I CCNGG 1 cut(s) 375
Bme18I GGWCC 2 cut(s) 323, 377
BmgT120I GGNCC 2 cut(s) 323, 377
BmiI GGNNCC 2 cut(s) 325, 743
BmrFI CCNGG 1 cut(s) 375
BmsI GCATC 2 cut(s) 259, 763
BpiI GAAGAC 1 cut(s) 861
Bpu1102I GCTNAGC 1 cut(s) 255
Bpu14I TTCGAA 1 cut(s) 596
BpuEI CTTGAG 3 cut(s) 62, 554, 680
BsaBI GATNNNNATC 1 cut(s) 1127
BsaI GGTCTC 1 cut(s) 1239
BsaJI CCNNGG 3 cut(s) 461, 839, 1073
BsaWI WCCGGW 2 cut(s) 1040, 1093
BsaXI ACNNNNNCTCC 4 cut(s) 339, 369, 786, 816
Bsc4I CCNNNNNNNGG 6 cut(s) 332, 333, 467, 562, 868, 1079
Bse21I CCTNAGG 1 cut(s) 1295
Bse3DI GCAATG 1 cut(s) 918
Bse8I GATNNNNATC 1 cut(s) 1127
BseBI CCWGG 1 cut(s) 375
BseDI CCNNGG 3 cut(s) 461, 839, 1073
BseGI GGATG 4 cut(s) 679, 736, 858, 1059
BseJI GATNNNNATC 1 cut(s) 1127
BseLI CCNNNNNNNGG 6 cut(s) 332, 333, 467, 562, 868, 1079
BseMI GCAATG 1 cut(s) 918
BseMII CTCAG 4 cut(s) 120, 269, 414, 552
BseRI GAGGAG 2 cut(s) 536, 1080
BseXI GCAGC 5 cut(s) 19, 22, 397, 778, 1148
BseYI CCCAGC 1 cut(s) 947
BsiSI CCGG 2 cut(s) 1041, 1094
BslFI GGGAC 1 cut(s) 1095
BslI CCNNNNNNNGG 6 cut(s) 332, 333, 467, 562, 868, 1079
BsmAI GTCTC 3 cut(s) 66, 1098, 1239
BsmBI CGTCTC 2 cut(s) 66, 1098
BsmFI GGGAC 1 cut(s) 1095
Bso31I GGTCTC 1 cut(s) 1239
Bsp119I TTCGAA 1 cut(s) 596
Bsp1407I TGTACA 1 cut(s) 1125
Bsp143I GATC 7 cut(s) 16, 37, 172, 435, 631, 663, 1247
Bsp1720I GCTNAGC 1 cut(s) 255
BspCNI CTCAG 4 cut(s) 119, 268, 415, 553
BspLI GGNNCC 2 cut(s) 325, 743
BspMI ACCTGC 1 cut(s) 769
BspPI GGATC 1 cut(s) 180
BspT104I TTCGAA 1 cut(s) 596
BspTNI GGTCTC 1 cut(s) 1239
BsrDI GCAATG 1 cut(s) 918
BsrGI TGTACA 1 cut(s) 1125
BssECI CCNNGG 3 cut(s) 461, 839, 1073
BssMI GATC 7 cut(s) 16, 37, 172, 435, 631, 663, 1247
BssT1I CCWWGG 3 cut(s) 461, 839, 1073
Bst2UI CCWGG 1 cut(s) 375
Bst4CI ACNGT 2 cut(s) 442, 929
Bst6I CTCTTC 1 cut(s) 867
BstAUI TGTACA 1 cut(s) 1125
BstBI TTCGAA 1 cut(s) 596
BstC8I GCNNGC 2 cut(s) 962, 966
BstDEI CTNAG 6 cut(s) 106, 255, 423, 561, 1100, 1295
BstENI CCTNNNNNAGG 1 cut(s) 465
BstF5I GGATG 4 cut(s) 679, 736, 858, 1059
BstH2I RGCGCY 1 cut(s) 353
BstHHI GCGC 2 cut(s) 352, 790
BstKTI GATC 7 cut(s) 19, 40, 175, 438, 634, 666, 1250
BstMAI GTCTC 3 cut(s) 66, 1098, 1239
BstMBI GATC 7 cut(s) 16, 37, 172, 435, 631, 663, 1247
BstMWI GCNNNNNNNGC 3 cut(s) 775, 944, 1167
BstNI CCWGG 1 cut(s) 375
BstNSI RCATGY 3 cut(s) 341, 530, 629
BstSCI CCNGG 1 cut(s) 373
BstV1I GCAGC 5 cut(s) 19, 22, 397, 778, 1148
BstV2I GAAGAC 1 cut(s) 861
BstX2I RGATCY 2 cut(s) 37, 172
BstYI RGATCY 2 cut(s) 37, 172
Bsu36I CCTNAGG 1 cut(s) 1295
BtsCI GGATG 4 cut(s) 679, 736, 858, 1059
BtsIMutI CAGTG 1 cut(s) 438
BveI ACCTGC 1 cut(s) 769
Cac8I GCNNGC 2 cut(s) 962, 966
CfoI GCGC 2 cut(s) 352, 790
Cfr13I GGNCC 2 cut(s) 323, 377
CseI GACGC 3 cut(s) 83, 758, 1185
Csp6I GTAC 2 cut(s) 1070, 1126
CviAII CATG 5 cut(s) 212, 338, 527, 626, 791
CviQI GTAC 2 cut(s) 1070, 1126
DdeI CTNAG 6 cut(s) 106, 255, 423, 561, 1100, 1295
DpnI GATC 7 cut(s) 18, 39, 174, 437, 633, 665, 1249
DpnII GATC 7 cut(s) 16, 37, 172, 435, 631, 663, 1247
DraI TTTAAA 1 cut(s) 900
Eam1104I CTCTTC 1 cut(s) 867
EarI CTCTTC 1 cut(s) 867
Eco130I CCWWGG 3 cut(s) 461, 839, 1073
Eco31I GGTCTC 1 cut(s) 1239
Eco47I GGWCC 2 cut(s) 323, 377
Eco47III AGCGCT 1 cut(s) 351
Eco57I CTGAAG 2 cut(s) 201, 278
Eco81I CCTNAGG 1 cut(s) 1295
EcoNI CCTNNNNNAGG 1 cut(s) 465
EcoRII CCWGG 1 cut(s) 373
EcoT14I CCWWGG 3 cut(s) 461, 839, 1073
ErhI CCWWGG 3 cut(s) 461, 839, 1073
Esp3I CGTCTC 2 cut(s) 66, 1098
FaeI CATG 5 cut(s) 215, 341, 530, 629, 794
FalI AAGNNNNNCTT 1 cut(s) 1278
FaqI GGGAC 1 cut(s) 1095
FatI CATG 5 cut(s) 211, 337, 526, 625, 790
FbaI TGATCA 1 cut(s) 435
Fnu4HI GCNGC 5 cut(s) 8, 11, 411, 767, 1162
FokI GGATG 4 cut(s) 686, 743, 845, 1066
Fsp4HI GCNGC 5 cut(s) 8, 11, 411, 767, 1162
FspBI CTAG 7 cut(s) 66, 315, 387, 462, 510, 686, 1151
FspI TGCGCA 1 cut(s) 789
GlaI GCGC 2 cut(s) 351, 789
GluI GCNGC 5 cut(s) 8, 11, 411, 767, 1162
GsaI CCCAGC 1 cut(s) 951
HaeII RGCGCY 1 cut(s) 353
HapII CCGG 2 cut(s) 1041, 1094
HgaI GACGC 3 cut(s) 83, 758, 1185
HhaI GCGC 2 cut(s) 352, 790
Hin1II CATG 5 cut(s) 215, 341, 530, 629, 794
Hin6I GCGC 2 cut(s) 350, 788
HinP1I GCGC 2 cut(s) 350, 788
HindIII AAGCTT 2 cut(s) 239, 290
HinfI GANTC 3 cut(s) 44, 598, 1110
HpaII CCGG 2 cut(s) 1041, 1094
HphI GGTGA 3 cut(s) 38, 155, 793
Hpy188I TCNGA 4 cut(s) 237, 502, 562, 1115
Hpy188III TCNNGA 6 cut(s) 41, 108, 296, 533, 641, 745
HpyAV CCTTC 3 cut(s) 176, 732, 1031
HpyCH4III ACNGT 2 cut(s) 442, 929
HpyCH4IV ACGT 2 cut(s) 398, 895
HpyCH4V TGCA 6 cut(s) 7, 610, 754, 766, 778, 938
HpyF10VI GCNNNNNNNGC 3 cut(s) 775, 944, 1167
HpyF3I CTNAG 6 cut(s) 106, 255, 423, 561, 1100, 1295
HpySE526I ACGT 2 cut(s) 398, 895
Hsp92II CATG 5 cut(s) 215, 341, 530, 629, 794
HspAI GCGC 2 cut(s) 350, 788
Ksp22I TGATCA 1 cut(s) 435
Kzo9I GATC 7 cut(s) 16, 37, 172, 435, 631, 663, 1247
LmnI GCTCC 4 cut(s) 347, 523, 682, 1096
Lsp1109I GCAGC 5 cut(s) 19, 22, 397, 778, 1148
LweI GCATC 2 cut(s) 259, 763
MaeI CTAG 7 cut(s) 66, 315, 387, 462, 510, 686, 1151
MaeII ACGT 2 cut(s) 398, 895
MaeIII GTNAC 2 cut(s) 649, 931
MalI GATC 7 cut(s) 18, 39, 174, 437, 633, 665, 1249
MboI GATC 7 cut(s) 16, 37, 172, 435, 631, 663, 1247
MboII GAAGA 5 cut(s) 727, 866, 884, 1257, 1270
MflI RGATCY 2 cut(s) 37, 172
MluCI AATT 6 cut(s) 21, 218, 367, 668, 749, 1032
MlyI GAGTC 1 cut(s) 53
MmeI TCCRAC 4 cut(s) 708, 849, 933, 1042
MnlI CCTC 8 cut(s) 408, 514, 556, 692, 879, 1007, 1035, 1058
MseI TTAA 6 cut(s) 366, 402, 890, 899, 1239, 1254
MslI CAYNNNNRTG 1 cut(s) 342
MspI CCGG 2 cut(s) 1041, 1094
MspR9I CCNGG 1 cut(s) 375
MvaI CCWGG 1 cut(s) 375
MwoI GCNNNNNNNGC 3 cut(s) 775, 944, 1167
NdeII GATC 7 cut(s) 16, 37, 172, 435, 631, 663, 1247
NlaIII CATG 5 cut(s) 215, 341, 530, 629, 794
NlaIV GGNNCC 2 cut(s) 325, 743
NmuCI GTSAC 1 cut(s) 931
NsbI TGCGCA 1 cut(s) 789
NspI RCATGY 3 cut(s) 341, 530, 629
NspV TTCGAA 1 cut(s) 596
PaqCI CACCTGC 1 cut(s) 769
PciI ACATGT 1 cut(s) 625
PfeI GAWTC 2 cut(s) 598, 1110
PflMI CCANNNNNTGG 1 cut(s) 868
PkrI GCNGC 5 cut(s) 9, 12, 412, 768, 1163
PleI GAGTC 1 cut(s) 52
PpsI GAGTC 1 cut(s) 52
PscI ACATGT 1 cut(s) 625
PsiI TTATAA 1 cut(s) 1037
Psp6I CCWGG 1 cut(s) 373
PspFI CCCAGC 1 cut(s) 947
PspGI CCWGG 1 cut(s) 373
PspN4I GGNNCC 2 cut(s) 325, 743
PspPI GGNCC 2 cut(s) 323, 377
PsuI RGATCY 2 cut(s) 37, 172
RsaI GTAC 2 cut(s) 1071, 1127
RsaNI GTAC 2 cut(s) 1070, 1126
RseI CAYNNNNRTG 1 cut(s) 342
SaqAI TTAA 6 cut(s) 366, 402, 890, 899, 1239, 1254
SatI GCNGC 5 cut(s) 8, 11, 411, 767, 1162
Sau3AI GATC 7 cut(s) 16, 37, 172, 435, 631, 663, 1247
Sau96I GGNCC 2 cut(s) 323, 377
SchI GAGTC 1 cut(s) 53
ScrFI CCNGG 1 cut(s) 375
SfaNI GCATC 2 cut(s) 259, 763
SfuI TTCGAA 1 cut(s) 596
SinI GGWCC 2 cut(s) 323, 377
SmiMI CAYNNNNRTG 1 cut(s) 342
SmlI CTYRAG 3 cut(s) 41, 533, 659
SmoI CTYRAG 3 cut(s) 41, 533, 659
Sse9I AATT 6 cut(s) 21, 218, 367, 668, 749, 1032
SspMI CTAG 7 cut(s) 66, 315, 387, 462, 510, 686, 1151
StyD4I CCNGG 1 cut(s) 373
StyI CCWWGG 3 cut(s) 461, 839, 1073
TaaI ACNGT 2 cut(s) 442, 929
TaiI ACGT 2 cut(s) 401, 898
TaqI TCGA 4 cut(s) 19, 596, 634, 666
TasI AATT 6 cut(s) 21, 218, 367, 668, 749, 1032
TatI WGTACW 1 cut(s) 1125
TfiI GAWTC 2 cut(s) 598, 1110
Tru1I TTAA 6 cut(s) 366, 402, 890, 899, 1239, 1254
Tru9I TTAA 6 cut(s) 366, 402, 890, 899, 1239, 1254
TscAI CASTG 1 cut(s) 445
TseFI GTSAC 1 cut(s) 931
TseI GCWGC 5 cut(s) 7, 10, 410, 766, 1161
Tsp45I GTSAC 1 cut(s) 931
TspDTI ATGAA 6 cut(s) 45, 566, 728, 907, 1070, 1235
TspGWI ACGGA 1 cut(s) 1122
TspRI CASTG 1 cut(s) 445
Van91I CCANNNNNTGG 1 cut(s) 868
VpaK11BI GGWCC 2 cut(s) 323, 377
XagI CCTNNNNNAGG 1 cut(s) 465
XceI RCATGY 3 cut(s) 341, 530, 629
XmaJI CCTAGG 1 cut(s) 461
XspI CTAG 7 cut(s) 66, 315, 387, 462, 510, 686, 1151
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.