Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0007265

Physical Location & Seq

Genomic Coordinates Forward (+)

10931284 .. 10936054

Gene Structure 4771 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G074900.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1368 bp

ATGGATCTAGCTGATGAAATACCGGTCAACAACAGAGAGGCAGAGGAAATGGACAGGGAGGCCTCGGCAGAAGCTCCTCTCAGAGAGCCCCATCTCTACCGGAACCAGTTTGGGGGCATGGTGAGAAAGAAAGCCTATATCTTTGATGGTTTTGGAAAGTTTTACAATAAGGAATGGGATCTTACAGAAGGTAGAGGAAATGAGTTTTGTTGGTACCATGTGGAACTTCCAAAAGGAAATCAGAAACTTTCTCAATCTGCACAATACCTCATTGGTGTTCTTTGCCCGCCTTTGAAACTCCAAGACATTCTCTCTCTTGTCAGCAATGGACCATTTTGTGGGCATGTTGATGGGGCTCTTGTTTTCAGAGTCAACTCTCCTGGCCCTCCATCCAGTGATTTTACATTTAGAATTGCCGCAAGAATTACTGAGAATGCAGTAATCACCGTGAGTTTGGGCCGTGTCCCCAGATTGGGTTTCTCACCAGTAGGTCAATCTCTTCTCTCAGAGATTCCTAGTGTGGAGAGTCCCTCTTATCATAGAGGTGAGCATAAGGAAAGGAGTGGGATTGTTATAGGGGAGCATGTTCTTGAGTTCTTATTGACAATGAATCACTCTGAGGAAGCCGATAATCCAGTGCCAAAATCTGTGTCAAATCTTGTAGTTCATATTGTTGACACGCATGTTGATCACCTCCAGGATGTTGTGACTAAACTTGAGATAGAATTGGATTCTGTTGAGCTTCAGCTGGATAAAGGTGGTTTTGCTTTGAAGAAACAAATGCTAGATGACAGAAGATTTCCTAAAATACATCTAGATCTGCAGCGCCTCCTGCAGGTGATTGCTCATGGGGAGCAAGTTTTTCCTCGGGTCAAAGAAAAATGTTCCTCAAAACATTGGTTTTCCAGTGAAGATATTATCTCTCTTGAAGAGCTGATCGGACGGTTGAGGAGGCTAAAGGACAATGTAGGCTTTATAGCAAATCGTGTCACAGCAATACAGGCTGGTCTAGACAGCTGGCAAGCTGAGCAGATAAACAGGAAACTGTATTATCTCTCATTCCTTTCTATAATATTCCTTCCTTTATCCATCATTACTGGAGTGTTTGGCATGAATGTGGGGGGAGTTCCATGGACAGGACAAAAAGACCCAACGTTGAAAAATGGTTTCCGTAATGTCATGTTACTCTGTGTAGCTATGCTACTTCTGGCACTGCTCTGCTTCAGCTTTCCTTCTCTGTATACCCGAATAGCTACTTGGCACAGGACAAGAGCCATGAAGAGAAGCTGGTCCCTCAACAGGAAATCATTCCTCAGGAGAACCCATGGAATTGGAGTTCAAGAAAGAAGGGGCTACCTTCGGATTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CorA

Protein Analysis

456

Amino Acids

51.63

Weight (kDa)

8.77

Isoelectric Point (pI)

42.82

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007265)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G04305
fragaria_vesca	FvH4_2g11180 FvH4_2g11180 FvH4_2g11180 FvH4_2g11180 FvH4_2g11180 FvH4_2g11180 FvH4_2g11180 FvH4_2g11180
malus_domestica	MD05G1049600.v1.1 MD10G1056700.v1.1
prunus_persica	Prupe.8G074900_v2.0.a1 Prupe.8G074900_v2.0.a1
pyrus_communis	pycom10g04360
rosa_chinensis	RchiOBHm_Chr6g0269501
rosa_laevigata	RLG00000013846
rosa_multiflora	Rmu_sc0010883.1_g000007
rosa_roxburghii	Rroxscaffold_7G00198670
rosa_rugosa	Rorug06G0048700 Rorug06G0048800
rosa_samantha	Rh6AG168700 Rh6BG174000 Rh6CG168300 Rh6DG160300
rosa_wichuraiana	Rw6G014520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	826
Acc36I	ACCTGC	1 cut(s)	826
Acc65I	GGTACC	1 cut(s)	213
AccB1I	GGYRCC	1 cut(s)	213
AccB7I	CCANNNNNTGG	1 cut(s)	338
AccI	GTMKAC	1 cut(s)	1241
AciI	CCGC	2 cut(s)	287, 417
AclI	AACGTT	1 cut(s)	1154
AclWI	GGATC	2 cut(s)	12, 186
AcuI	CTGAAG	2 cut(s)	728, 1207
AfaI	GTAC	1 cut(s)	215
AfiI	CCNNNNNNNGG	7 cut(s)	112, 338, 472, 473, 835, 1136, 1299
AgeI	ACCGGT	1 cut(s)	22
AgsI	TTSAA	5 cut(s)	295, 772, 929, 1159, 1340
AjnI	CCWGG	2 cut(s)	379, 696
AjuI	GAANNNNNNNTTGG	2 cut(s)	1240, 1272
AloI	GAACNNNNNNTCC	2 cut(s)	1320, 1352
AlwI	GGATC	2 cut(s)	12, 186
Ama87I	CYCGRG	1 cut(s)	867
AoxI	GGCC	3 cut(s)	60, 382, 457
ApeKI	GCWGC	1 cut(s)	823
ArsI	GACNNNNNNTTYG	2 cut(s)	635, 667
AsiGI	ACCGGT	1 cut(s)	22
Asp700I	GAANNNNTTC	1 cut(s)	1307
Asp718I	GGTACC	1 cut(s)	213
AspLEI	GCGC	1 cut(s)	828
AspS9I	GGNCC	4 cut(s)	329, 383, 457, 1290
AsuHPI	GGTGA	6 cut(s)	133, 436, 474, 557, 683, 850
AvaI	CYCGRG	1 cut(s)	867
AvaII	GGWCC	2 cut(s)	329, 1290
AxyI	CCTNAGG	1 cut(s)	1313
BanI	GGYRCC	1 cut(s)	213
BanII	GRGCYC	2 cut(s)	90, 358
BbvI	GCAGC	1 cut(s)	835
BccI	CCATC	5 cut(s)	99, 140, 344, 397, 1097
BceAI	ACGGC	1 cut(s)	444
BciT130I	CCWGG	2 cut(s)	381, 698
BclI	TGATCA	1 cut(s)	688
BfaI	CTAG	5 cut(s)	8, 516, 785, 815, 1010
BfmI	CTRYAG	2 cut(s)	821, 833
BfoI	RGCGCY	1 cut(s)	829
BfuAI	ACCTGC	1 cut(s)	826
BglII	AGATCT	1 cut(s)	817
BisI	GCNGC	2 cut(s)	417, 824
BlpI	GCTNAGC	1 cut(s)	1026
BlsI	GCNGC	2 cut(s)	418, 825
Bme1390I	CCNGG	2 cut(s)	381, 698
Bme18I	GGWCC	2 cut(s)	329, 1290
BmeT110I	CYCGRG	1 cut(s)	867
BmgT120I	GGNCC	4 cut(s)	329, 383, 457, 1290
BmiI	GGNNCC	3 cut(s)	104, 215, 1292
BmrFI	CCNGG	2 cut(s)	381, 698
BplI	GAGNNNNNCTC	2 cut(s)	515, 547
BpmI	CTGGAG	2 cut(s)	680, 1119
Bpu1102I	GCTNAGC	1 cut(s)	1026
BpuEI	CTTGAG	2 cut(s)	611, 737
BsaJI	CCNNGG	4 cut(s)	63, 866, 1130, 1324
BsaWI	WCCGGW	2 cut(s)	22, 99
Bsc4I	CCNNNNNNNGG	7 cut(s)	112, 338, 472, 473, 835, 1136, 1299
Bse118I	RCCGGY	1 cut(s)	22
Bse1I	ACTGG	6 cut(s)	106, 393, 485, 635, 906, 1102
Bse21I	CCTNAGG	1 cut(s)	1313
Bse3DI	GCAATG	1 cut(s)	331
BseBI	CCWGG	2 cut(s)	381, 698
BseDI	CCNNGG	4 cut(s)	63, 866, 1130, 1324
BseGI	GGATG	2 cut(s)	389, 706
BseLI	CCNNNNNNNGG	7 cut(s)	112, 338, 472, 473, 835, 1136, 1299
BseMI	GCAATG	1 cut(s)	331
BseMII	CTCAG	6 cut(s)	94, 420, 519, 609, 1017, 1327
BseNI	ACTGG	6 cut(s)	106, 393, 485, 635, 906, 1102
BseRI	GAGGAG	2 cut(s)	66, 964
BseXI	GCAGC	1 cut(s)	835
BsgI	GTGCAG	1 cut(s)	243
BshFI	GGCC	3 cut(s)	62, 384, 459
BshNI	GGYRCC	1 cut(s)	213
BshTI	ACCGGT	1 cut(s)	22
BsiHKCI	CYCGRG	1 cut(s)	867
BsiSI	CCGG	2 cut(s)	23, 100
BslFI	GGGAC	3 cut(s)	449, 513, 1276
BslI	CCNNNNNNNGG	7 cut(s)	112, 338, 472, 473, 835, 1136, 1299
BsmFI	GGGAC	3 cut(s)	449, 513, 1276
BsmI	GAATGC	1 cut(s)	439
BsnI	GGCC	3 cut(s)	62, 384, 459
BsoBI	CYCGRG	1 cut(s)	867
Bsp1286I	GDGCHC	2 cut(s)	90, 358
Bsp143I	GATC	5 cut(s)	4, 178, 688, 817, 936
Bsp1720I	GCTNAGC	1 cut(s)	1026
Bsp19I	CCATGG	2 cut(s)	1130, 1324
BspACI	CCGC	2 cut(s)	287, 417
BspANI	GGCC	3 cut(s)	62, 384, 459
BspCNI	CTCAG	6 cut(s)	93, 421, 518, 610, 1018, 1326
BspLI	GGNNCC	3 cut(s)	104, 215, 1292
BspMAI	CTGCAG	2 cut(s)	825, 837
BspMI	ACCTGC	1 cut(s)	826
BspPI	GGATC	2 cut(s)	12, 186
BspQI	GCTCTTC	1 cut(s)	924
BspT107I	GGYRCC	1 cut(s)	213
BsrDI	GCAATG	1 cut(s)	331
BsrFI	RCCGGY	1 cut(s)	22
BsrI	ACTGG	6 cut(s)	106, 393, 485, 635, 906, 1102
BssAI	RCCGGY	1 cut(s)	22
BssECI	CCNNGG	4 cut(s)	63, 866, 1130, 1324
BssMI	GATC	5 cut(s)	4, 178, 688, 817, 936
BssNAI	GTATAC	1 cut(s)	1242
BssT1I	CCWWGG	2 cut(s)	1130, 1324
Bst1107I	GTATAC	1 cut(s)	1242
Bst2UI	CCWGG	2 cut(s)	381, 698
Bst4CI	ACNGT	3 cut(s)	448, 945, 1047
Bst6I	CTCTTC	3 cut(s)	504, 924, 1274
BstC8I	GCNNGC	3 cut(s)	287, 1019, 1023
BstDEI	CTNAG	6 cut(s)	80, 429, 505, 618, 1026, 1313
BstDSI	CCRYGG	2 cut(s)	1130, 1324
BstENI	CCTNNNNNAGG	1 cut(s)	833
BstF5I	GGATG	2 cut(s)	389, 706
BstH2I	RGCGCY	1 cut(s)	829
BstHHI	GCGC	1 cut(s)	828
BstKTI	GATC	5 cut(s)	7, 181, 691, 820, 939
BstMBI	GATC	5 cut(s)	4, 178, 688, 817, 936
BstMWI	GCNNNNNNNGC	3 cut(s)	832, 1001, 1027
BstNI	CCWGG	2 cut(s)	381, 698
BstNSI	RCATGY	3 cut(s)	347, 587, 686
BstSCI	CCNGG	2 cut(s)	379, 696
BstSFI	CTRYAG	2 cut(s)	821, 833
BstV1I	GCAGC	1 cut(s)	835
BstX2I	RGATCY	3 cut(s)	4, 178, 817
BstXI	CCANNNNNNTGG	1 cut(s)	1331
BstYI	RGATCY	3 cut(s)	4, 178, 817
BstZ17I	GTATAC	1 cut(s)	1242
Bsu36I	CCTNAGG	1 cut(s)	1313
BsuRI	GGCC	3 cut(s)	62, 384, 459
BtgI	CCRYGG	2 cut(s)	1130, 1324
BtsCI	GGATG	2 cut(s)	389, 706
BtsI	GCAGTG	1 cut(s)	1211
BtsIMutI	CAGTG	4 cut(s)	400, 642, 913, 1211
BveI	ACCTGC	1 cut(s)	826
Cac8I	GCNNGC	3 cut(s)	287, 1019, 1023
CfoI	GCGC	1 cut(s)	828
Cfr10I	RCCGGY	1 cut(s)	22
Cfr13I	GGNCC	4 cut(s)	329, 383, 457, 1290
Csp6I	GTAC	1 cut(s)	214
CspAI	ACCGGT	1 cut(s)	22
CviQI	GTAC	1 cut(s)	214
DdeI	CTNAG	6 cut(s)	80, 429, 505, 618, 1026, 1313
DpnI	GATC	5 cut(s)	6, 180, 690, 819, 938
DpnII	GATC	5 cut(s)	4, 178, 688, 817, 936
Eam1104I	CTCTTC	3 cut(s)	504, 924, 1274
EarI	CTCTTC	3 cut(s)	504, 924, 1274
Eco130I	CCWWGG	2 cut(s)	1130, 1324
Eco147I	AGGCCT	1 cut(s)	62
Eco24I	GRGCYC	2 cut(s)	90, 358
Eco47I	GGWCC	2 cut(s)	329, 1290
Eco57I	CTGAAG	2 cut(s)	728, 1207
Eco81I	CCTNAGG	1 cut(s)	1313
Eco88I	CYCGRG	1 cut(s)	867
EcoNI	CCTNNNNNAGG	1 cut(s)	833
EcoRII	CCWGG	2 cut(s)	379, 696
EcoT14I	CCWWGG	2 cut(s)	1130, 1324
EcoT38I	GRGCYC	2 cut(s)	90, 358
ErhI	CCWWGG	2 cut(s)	1130, 1324
FaqI	GGGAC	3 cut(s)	449, 513, 1276
FauI	CCCGC	1 cut(s)	294
FbaI	TGATCA	1 cut(s)	688
FblI	GTMKAC	1 cut(s)	1241
Fnu4HI	GCNGC	2 cut(s)	417, 824
FokI	GGATG	2 cut(s)	376, 713
FriOI	GRGCYC	2 cut(s)	90, 358
Fsp4HI	GCNGC	2 cut(s)	417, 824
FspBI	CTAG	5 cut(s)	8, 516, 785, 815, 1010
GlaI	GCGC	1 cut(s)	827
GluI	GCNGC	2 cut(s)	417, 824
GsuI	CTGGAG	2 cut(s)	680, 1119
HaeII	RGCGCY	1 cut(s)	829
HaeIII	GGCC	3 cut(s)	62, 384, 459
HapII	CCGG	2 cut(s)	23, 100
HhaI	GCGC	1 cut(s)	828
Hin6I	GCGC	1 cut(s)	826
HinP1I	GCGC	1 cut(s)	826
HincII	GTYRAC	3 cut(s)	28, 373, 676
HindII	GTYRAC	3 cut(s)	28, 373, 676
HinfI	GANTC	5 cut(s)	369, 511, 526, 610, 731
HpaII	CCGG	2 cut(s)	23, 100
HphI	GGTGA	6 cut(s)	133, 436, 474, 557, 683, 850
Hpy166II	GTNNAC	4 cut(s)	28, 373, 676, 1242
Hpy188I	TCNGA	7 cut(s)	83, 243, 368, 508, 619, 941, 1362
Hpy188III	TCNNGA	6 cut(s)	590, 815, 926, 1010, 1315, 1340
Hpy8I	GTNNAC	4 cut(s)	28, 373, 676, 1242
HpyAV	CCTTC	5 cut(s)	182, 1088, 1242, 1341, 1367
HpyCH4III	ACNGT	3 cut(s)	448, 945, 1047
HpyCH4IV	ACGT	1 cut(s)	1154
HpyCH4V	TGCA	4 cut(s)	260, 437, 823, 835
HpyF10VI	GCNNNNNNNGC	3 cut(s)	832, 1001, 1027
HpyF3I	CTNAG	6 cut(s)	80, 429, 505, 618, 1026, 1313
HpySE526I	ACGT	1 cut(s)	1154
HspAI	GCGC	1 cut(s)	826
KpnI	GGTACC	1 cut(s)	217
Ksp22I	TGATCA	1 cut(s)	688
Kzo9I	GATC	5 cut(s)	4, 178, 688, 817, 936
LguI	GCTCTTC	1 cut(s)	924
LmnI	GCTCC	3 cut(s)	79, 580, 853
Lsp1109I	GCAGC	1 cut(s)	835
MaeI	CTAG	5 cut(s)	8, 516, 785, 815, 1010
MaeII	ACGT	1 cut(s)	1154
MaeIII	GTNAC	3 cut(s)	706, 988, 1182
MalI	GATC	5 cut(s)	6, 180, 690, 819, 938
MboI	GATC	5 cut(s)	4, 178, 688, 817, 936
MboII	GAAGA	6 cut(s)	491, 784, 807, 923, 941, 1291
MflI	RGATCY	3 cut(s)	4, 178, 817
MhlI	GDGCHC	2 cut(s)	90, 358
MluCI	AATT	4 cut(s)	411, 423, 725, 1329
MlyI	GAGTC	2 cut(s)	378, 535
MroXI	GAANNNNTTC	1 cut(s)	1307
MslI	CAYNNNNRTG	3 cut(s)	348, 543, 1115
MspA1I	CMGCKG	2 cut(s)	748, 1017
MspI	CCGG	2 cut(s)	23, 100
MspR9I	CCNGG	2 cut(s)	381, 698
Mva1269I	GAATGC	1 cut(s)	439
MvaI	CCWGG	2 cut(s)	381, 698
MwoI	GCNNNNNNNGC	3 cut(s)	832, 1001, 1027
NcoI	CCATGG	2 cut(s)	1130, 1324
NdeII	GATC	5 cut(s)	4, 178, 688, 817, 936
NlaIV	GGNNCC	3 cut(s)	104, 215, 1292
NmeAIII	GCCGAG	1 cut(s)	44
NmuCI	GTSAC	2 cut(s)	706, 988
NspI	RCATGY	3 cut(s)	347, 587, 686
PaqCI	CACCTGC	1 cut(s)	826
PceI	AGGCCT	1 cut(s)	62
PciSI	GCTCTTC	1 cut(s)	924
PctI	GAATGC	1 cut(s)	439
PdmI	GAANNNNTTC	1 cut(s)	1307
PfeI	GAWTC	3 cut(s)	511, 610, 731
PflMI	CCANNNNNTGG	1 cut(s)	338
PfoI	TCCNGGA	1 cut(s)	696
PinAI	ACCGGT	1 cut(s)	22
PkrI	GCNGC	2 cut(s)	418, 825
PleI	GAGTC	2 cut(s)	377, 534
PpsI	GAGTC	2 cut(s)	377, 534
Psp1406I	AACGTT	1 cut(s)	1154
Psp6I	CCWGG	2 cut(s)	379, 696
PspGI	CCWGG	2 cut(s)	379, 696
PspN4I	GGNNCC	3 cut(s)	104, 215, 1292
PspPI	GGNCC	4 cut(s)	329, 383, 457, 1290
PstI	CTGCAG	2 cut(s)	825, 837
PsuI	RGATCY	3 cut(s)	4, 178, 817
PvuII	CAGCTG	2 cut(s)	748, 1017
RsaI	GTAC	1 cut(s)	215
RsaNI	GTAC	1 cut(s)	214
RseI	CAYNNNNRTG	3 cut(s)	348, 543, 1115
SapI	GCTCTTC	1 cut(s)	924
SatI	GCNGC	2 cut(s)	417, 824
Sau3AI	GATC	5 cut(s)	4, 178, 688, 817, 936
Sau96I	GGNCC	4 cut(s)	329, 383, 457, 1290
SbfI	CCTGCAGG	1 cut(s)	837
SchI	GAGTC	2 cut(s)	378, 535
ScrFI	CCNGG	2 cut(s)	381, 698
SdaI	CCTGCAGG	1 cut(s)	837
SduI	GDGCHC	2 cut(s)	90, 358
SfcI	CTRYAG	2 cut(s)	821, 833
SinI	GGWCC	2 cut(s)	329, 1290
SmiMI	CAYNNNNRTG	3 cut(s)	348, 543, 1115
SmlI	CTYRAG	2 cut(s)	590, 716
SmoI	CTYRAG	2 cut(s)	590, 716
Sse8387I	CCTGCAGG	1 cut(s)	837
Sse9I	AATT	4 cut(s)	411, 423, 725, 1329
SseBI	AGGCCT	1 cut(s)	62
SsiI	CCGC	2 cut(s)	287, 417
SspI	AATATT	1 cut(s)	1074
SspMI	CTAG	5 cut(s)	8, 516, 785, 815, 1010
StuI	AGGCCT	1 cut(s)	62
StyD4I	CCNGG	2 cut(s)	379, 696
StyI	CCWWGG	2 cut(s)	1130, 1324
TaaI	ACNGT	3 cut(s)	448, 945, 1047
TaiI	ACGT	1 cut(s)	1157
TasI	AATT	4 cut(s)	411, 423, 725, 1329
TauI	GCSGC	1 cut(s)	419
TfiI	GAWTC	3 cut(s)	511, 610, 731
TscAI	CASTG	4 cut(s)	400, 642, 913, 1218
TseFI	GTSAC	2 cut(s)	706, 988
TseI	GCWGC	1 cut(s)	823
Tsp45I	GTSAC	2 cut(s)	706, 988
TspDTI	ATGAA	5 cut(s)	30, 623, 656, 1127, 1292
TspGWI	ACGGA	1 cut(s)	1160
TspRI	CASTG	4 cut(s)	400, 642, 913, 1218
Van91I	CCANNNNNTGG	1 cut(s)	338
VpaK11BI	GGWCC	2 cut(s)	329, 1290
XagI	CCTNNNNNAGG	1 cut(s)	833
XbaI	TCTAGA	2 cut(s)	814, 1009
XceI	RCATGY	3 cut(s)	347, 587, 686
XmiI	GTMKAC	1 cut(s)	1241
XmnI	GAANNNNTTC	1 cut(s)	1307
XspI	CTAG	5 cut(s)	8, 516, 785, 815, 1010

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.