Rorug06G0048800

CorA-like Mg2+ transporter protein

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
Physical Location & Seq
Reverse (-)
6496738 .. 6496929
192 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0048800.1

Sequence Viewer

Length: 192 bp
ATGGTTTTAGCAAGACAATTGCAGTTACGTGTCACTCACATCTTTCGGGAAGGGAATGTTGTGGCAGATGTGTTAGCTAACTACGGTGCATCACATGAAGGTACTCACAGATGGGATTCGTTGCCCCAGTTTTTGTCTTCTGCCTTTGGCCGAGACTTTGTTTCATGGCCGGCCTATAGATTTGCTTGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

63

Amino Acids

7.2

Weight (kDa)

8.02

Isoelectric Point (pI)

46.29

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcoI YGGCCR 2 cut(s) 148, 167
AfaI GTAC 1 cut(s) 103
AflIII ACRYGT 1 cut(s) 28
AluBI AGCT 1 cut(s) 77
AluI AGCT 1 cut(s) 77
Alw26I GTCTC 1 cut(s) 147
AoxI GGCC 3 cut(s) 148, 167, 171
BbsI GAAGAC 1 cut(s) 129
BccI CCATC 1 cut(s) 105
BcoDI GTCTC 1 cut(s) 147
BfmI CTRYAG 1 cut(s) 175
BmrI ACTGGG 1 cut(s) 121
BmsI GCATC 1 cut(s) 98
BmuI ACTGGG 1 cut(s) 121
BpiI GAAGAC 1 cut(s) 129
BsaAI YACGTR 1 cut(s) 29
Bse118I RCCGGY 1 cut(s) 169
Bse1I ACTGG 1 cut(s) 127
BseNI ACTGG 1 cut(s) 127
BshFI GGCC 3 cut(s) 150, 169, 173
BsiSI CCGG 1 cut(s) 170
BsmAI GTCTC 1 cut(s) 147
BsnI GGCC 3 cut(s) 150, 169, 173
BspANI GGCC 3 cut(s) 150, 169, 173
BsrFI RCCGGY 1 cut(s) 169
BsrI ACTGG 1 cut(s) 127
BssAI RCCGGY 1 cut(s) 169
Bst4CI ACNGT 1 cut(s) 86
BstBAI YACGTR 1 cut(s) 29
BstC8I GCNNGC 1 cut(s) 171
BstMAI GTCTC 1 cut(s) 147
BstSFI CTRYAG 1 cut(s) 175
BstV2I GAAGAC 1 cut(s) 129
BsuRI GGCC 3 cut(s) 150, 169, 173
Cac8I GCNNGC 1 cut(s) 171
Cfr10I RCCGGY 1 cut(s) 169
Csp6I GTAC 1 cut(s) 102
CviAII CATG 2 cut(s) 95, 165
CviJI RGCY 4 cut(s) 77, 150, 169, 173
CviKI_1 RGCY 4 cut(s) 77, 150, 169, 173
CviQI GTAC 1 cut(s) 102
EaeI YGGCCR 2 cut(s) 148, 167
FaeI CATG 2 cut(s) 98, 168
FaiI YATR 3 cut(s) 96, 166, 177
FatI CATG 2 cut(s) 94, 164
FseI GGCCGGCC 1 cut(s) 173
HaeIII GGCC 3 cut(s) 150, 169, 173
HapII CCGG 1 cut(s) 170
Hin1II CATG 2 cut(s) 98, 168
HinfI GANTC 1 cut(s) 116
HpaII CCGG 1 cut(s) 170
Hpy188III TCNNGA 1 cut(s) 47
HpyAV CCTTC 2 cut(s) 44, 92
HpyCH4III ACNGT 1 cut(s) 86
HpyCH4IV ACGT 1 cut(s) 28
HpyCH4V TGCA 2 cut(s) 22, 89
HpySE526I ACGT 1 cut(s) 28
Hsp92II CATG 2 cut(s) 98, 168
KroI GCCGGC 1 cut(s) 169
KroNI GCCGGC 1 cut(s) 171
LpnPI CCDG 2 cut(s) 140, 183
LweI GCATC 1 cut(s) 98
MaeII ACGT 1 cut(s) 28
MaeIII GTNAC 2 cut(s) 24, 31
MboII GAAGA 1 cut(s) 129
MfeI CAATTG 1 cut(s) 17
MluCI AATT 1 cut(s) 17
MroNI GCCGGC 1 cut(s) 169
MspI CCGG 1 cut(s) 170
MunI CAATTG 1 cut(s) 17
NaeI GCCGGC 1 cut(s) 171
NgoMIV GCCGGC 1 cut(s) 169
NlaIII CATG 2 cut(s) 98, 168
NmeAIII GCCGAG 1 cut(s) 176
NmuCI GTSAC 1 cut(s) 31
PdiI GCCGGC 1 cut(s) 171
PfeI GAWTC 1 cut(s) 116
Ppu21I YACGTR 1 cut(s) 29
RigI GGCCGGCC 1 cut(s) 173
RsaI GTAC 1 cut(s) 103
RsaNI GTAC 1 cut(s) 102
SetI ASST 3 cut(s) 31, 79, 103
SfaNI GCATC 1 cut(s) 98
SfcI CTRYAG 1 cut(s) 175
SgeI CNNG 8 cut(s) 24, 41, 59, 107, 139, 164, 177, 182
Sse9I AATT 1 cut(s) 17
TaaI ACNGT 1 cut(s) 86
TaiI ACGT 1 cut(s) 31
TasI AATT 1 cut(s) 17
TfiI GAWTC 1 cut(s) 116
TseFI GTSAC 1 cut(s) 31
Tsp45I GTSAC 1 cut(s) 31
TspDTI ATGAA 2 cut(s) 111, 153
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.