MD10G1056700.v1.1

CorA-like Mg2+ transporter protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr10
OG0007265
Physical Location & Seq
Forward (+)
7739097 .. 7742925
3829 bp
Loading structure...
UTR
Exon/CDS
Intron
MD10G1056700.v1.1.491

Sequence Viewer

Length: 1368 bp
ATGGAGCTACCTGATGAGGAAGCCGTCACAAACGGAGAGGCGGAGGAAATGGACAAAGGGCCCTCTGCGGAGGCTCCTCTTCAGGAGCCCCATTCCTACCGGAGTCATTTTGGGGGGATGGTGAGGAAGAAAGCTTATATCTTTGATGGTCTTGGAAATTTTTACAACAAGGAATGGGATCTTACAGAAGGTAGAGGCAATGAGTTCTGTTGGTACCATGTTGAACTTCCAAAAGGACATCAGAAGCTTTCTCAGTCTGCACAATACCTCATTGGTGTTCTTTGCCCGCCTTTGAAACTCCAGGATATTCTCTCTCTTGTCAGCAATGGACCATTTTGTGGGTATGTTGATGGGGCTCTGGTCTTCAGAGTCAACTCTCCTGGCCCTCCCTCCAGTGATTTCACATTTAGAATTGCTGCTAGAATTACTAAGAATTCAGTGATCACTGTGTCTTTGGGCCGGGTTCCCAGATTGGGTTTCTCACCGGTGGGTCAATCTCTTCTCTCAGAGATTCCTAGTGTGGAGAGTCCCTCATATCATAGAGGTGAGCAGAGGGAAAAGAGCGGGATTGTCATAGGGGAGCATGTTCTTGAGTTCTTATTGACAATGAATCACTCTGAGGAAGCCGATAATCCCGTGCCAAAATCTGTCTCAAATCTTGTAGTTCATATTGTTGACACGCATGTGGACCACCTCCAAGATGTTGTGACTAAACTTGAGATAGAGTTGGATTCTGTTGAGCTTCAGATGGATAAAGGTGGGCTTGCTTTAAAGAAACAAATGCTGGATGACAGGAGATTTCCTAAAATGCATCTAGATCTGCAGCGGCTCCTACAGGTGATTGCTCATGGGGAGCAAGTTTTTCCTCGCGTCAGAGAAAGATGTTCCTCTAAGCAATGGTTTTTGAGTGAAGATATTACCTCTCTTGAAGAGCTGATCGGACGGTTGAGGAGGCTAAAGGAGAATGTAGGCTTTATAGCAAATCGTGTCACGGCGATACAGGCTGGTCTAGACAGTTGGCAAGCTGAGCAGATAAACAGGAAACTGTATTATCTCTCATTCCTATCTATAATATTCCTTCCTTTATCCATCGTGACCGGAGTGTTTGGCATGAATGTGGGGGGAGTTCCATGGACGGAACAAAAGGACCCGACGGTGAAAGATGGTTTCCGTAATGTCATGTTACTCTGTGTAGCTATGCTTCTTCTGGCACTTCTCTGCTTCAGCTTTCCTGTTTTTTATACCCGAATAGCTGCTTGGCACAGGAGAAGAGTCATGAAGAGGAGCTGGTCCCTCAACAGGAAGTCATACCTAAAGAGAACCCATGGAATTGAAGCTCAAGAAAGAAAGGGCTACCTCCGCATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
CorA

Protein Analysis

456

Amino Acids

51.63

Weight (kDa)

8.12

Isoelectric Point (pI)

47.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CorA PF01544 210 - 408 2.6e-25 CorA-like Mg2+ transporter protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 213
AccB1I GGYRCC 1 cut(s) 213
AccB7I CCANNNNNTGG 1 cut(s) 338
AccBSI CCGCTC 1 cut(s) 564
AccII CGCG 1 cut(s) 870
AciI CCGC 6 cut(s) 41, 68, 287, 564, 826, 1360
AclWI GGATC 1 cut(s) 186
AcsI RAATTY 2 cut(s) 157, 433
AcuI CTGAAG 4 cut(s) 65, 349, 728, 1207
AfaI GTAC 1 cut(s) 215
AfiI CCNNNNNNNGG 3 cut(s) 338, 473, 1299
AgeI ACCGGT 1 cut(s) 484
AgsI TTSAA 4 cut(s) 224, 295, 929, 1334
AjnI CCWGG 2 cut(s) 300, 379
AjuI GAANNNNNNNTTGG 2 cut(s) 1240, 1272
AleI CACNNNNGTG 1 cut(s) 683
Alw26I GTCTC 1 cut(s) 655
AlwI GGATC 1 cut(s) 186
AoxI GGCC 3 cut(s) 59, 382, 457
ApaI GGGCCC 1 cut(s) 63
ApeKI GCWGC 3 cut(s) 416, 823, 1253
ApoI RAATTY 2 cut(s) 157, 433
AsiGI ACCGGT 1 cut(s) 484
Asp718I GGTACC 1 cut(s) 213
AspS9I GGNCC 8 cut(s) 59, 60, 329, 383, 457, 688, 1147, 1290
AsuC2I CCSGG 1 cut(s) 461
AsuHPI GGTGA 5 cut(s) 133, 474, 557, 850, 1168
AvaII GGWCC 4 cut(s) 329, 688, 1147, 1290
BaeGI GKGCMC 1 cut(s) 63
BanI GGYRCC 1 cut(s) 213
BanII GRGCYC 3 cut(s) 63, 90, 358
BarI GAAGNNNNNNTAC 2 cut(s) 1185, 1217
BbsI GAAGAC 1 cut(s) 355
BbvI GCAGC 3 cut(s) 403, 835, 1240
BccI CCATC 6 cut(s) 112, 140, 344, 742, 1097, 1157
BceAI ACGGC 2 cut(s) 8, 1008
BciT130I CCWGG 2 cut(s) 302, 381
BclI TGATCA 1 cut(s) 441
BcnI CCSGG 1 cut(s) 461
BcoDI GTCTC 1 cut(s) 655
BfaI CTAG 4 cut(s) 420, 516, 815, 1010
BfmI CTRYAG 2 cut(s) 821, 833
BglII AGATCT 1 cut(s) 817
BisI GCNGC 4 cut(s) 417, 824, 827, 1254
BlpI GCTNAGC 1 cut(s) 1026
BlsI GCNGC 4 cut(s) 418, 825, 828, 1255
Bme1390I CCNGG 3 cut(s) 302, 381, 461
Bme18I GGWCC 4 cut(s) 329, 688, 1147, 1290
BmgT120I GGNCC 8 cut(s) 59, 60, 329, 383, 457, 688, 1147, 1290
BmiI GGNNCC 8 cut(s) 61, 75, 87, 215, 465, 830, 1149, 1292
BmrFI CCNGG 3 cut(s) 302, 381, 461
BmsI GCATC 1 cut(s) 820
BpiI GAAGAC 1 cut(s) 355
BplI GAGNNNNNCTC 2 cut(s) 515, 547
BpmI CTGGAG 2 cut(s) 284, 376
Bpu1102I GCTNAGC 1 cut(s) 1026
BpuEI CTTGAG 3 cut(s) 611, 737, 1323
BpuMI CCSGG 1 cut(s) 461
BsaJI CCNNGG 2 cut(s) 1130, 1324
BsaWI WCCGGW 3 cut(s) 99, 484, 1097
Bsc4I CCNNNNNNNGG 3 cut(s) 338, 473, 1299
Bse118I RCCGGY 1 cut(s) 484
Bse1I ACTGG 1 cut(s) 393
Bse3DI GCAATG 3 cut(s) 205, 331, 902
BseBI CCWGG 2 cut(s) 302, 381
BseDI CCNNGG 2 cut(s) 1130, 1324
BseGI GGATG 2 cut(s) 123, 793
BseLI CCNNNNNNNGG 3 cut(s) 338, 473, 1299
BseMI GCAATG 3 cut(s) 205, 331, 902
BseMII CTCAG 4 cut(s) 266, 519, 609, 1017
BseNI ACTGG 1 cut(s) 393
BseRI GAGGAG 3 cut(s) 66, 964, 1297
BseSI GKGCMC 1 cut(s) 63
BseXI GCAGC 3 cut(s) 403, 835, 1240
BsgI GTGCAG 1 cut(s) 243
Bsh1236I CGCG 1 cut(s) 870
BshFI GGCC 3 cut(s) 61, 384, 459
BshNI GGYRCC 1 cut(s) 213
BshTI ACCGGT 1 cut(s) 484
BsiSI CCGG 4 cut(s) 100, 460, 485, 1098
BslFI GGGAC 2 cut(s) 513, 1276
BslI CCNNNNNNNGG 3 cut(s) 338, 473, 1299
BsmAI GTCTC 1 cut(s) 655
BsmFI GGGAC 2 cut(s) 513, 1276
BsnI GGCC 3 cut(s) 61, 384, 459
Bsp120I GGGCCC 1 cut(s) 59
Bsp1286I GDGCHC 3 cut(s) 63, 90, 358
Bsp143I GATC 4 cut(s) 178, 441, 817, 936
Bsp1720I GCTNAGC 1 cut(s) 1026
Bsp19I CCATGG 2 cut(s) 1130, 1324
BspACI CCGC 6 cut(s) 41, 68, 287, 564, 826, 1360
BspANI GGCC 3 cut(s) 61, 384, 459
BspCNI CTCAG 4 cut(s) 265, 518, 610, 1018
BspFNI CGCG 1 cut(s) 870
BspHI TCATGA 1 cut(s) 1275
BspLI GGNNCC 8 cut(s) 61, 75, 87, 215, 465, 830, 1149, 1292
BspMAI CTGCAG 1 cut(s) 825
BspPI GGATC 1 cut(s) 186
BspQI GCTCTTC 1 cut(s) 924
BspT107I GGYRCC 1 cut(s) 213
BsrBI CCGCTC 1 cut(s) 564
BsrDI GCAATG 3 cut(s) 205, 331, 902
BsrFI RCCGGY 1 cut(s) 484
BsrI ACTGG 1 cut(s) 393
BssAI RCCGGY 1 cut(s) 484
BssECI CCNNGG 2 cut(s) 1130, 1324
BssMI GATC 4 cut(s) 178, 441, 817, 936
BssT1I CCWWGG 2 cut(s) 1130, 1324
Bst2UI CCWGG 2 cut(s) 302, 381
Bst4CI ACNGT 5 cut(s) 448, 945, 1016, 1047, 1156
Bst6I CTCTTC 5 cut(s) 84, 504, 924, 1264, 1274
BstC8I GCNNGC 3 cut(s) 287, 765, 1023
BstDEI CTNAG 6 cut(s) 252, 429, 505, 618, 891, 1026
BstDSI CCRYGG 2 cut(s) 1130, 1324
BstF5I GGATG 2 cut(s) 123, 793
BstFNI CGCG 1 cut(s) 870
BstKTI GATC 4 cut(s) 181, 444, 820, 939
BstMAI GTCTC 1 cut(s) 655
BstMBI GATC 4 cut(s) 178, 441, 817, 936
BstMWI GCNNNNNNNGC 3 cut(s) 1001, 1027, 1359
BstNI CCWGG 2 cut(s) 302, 381
BstNSI RCATGY 2 cut(s) 587, 686
BstSCI CCNGG 3 cut(s) 300, 379, 459
BstSFI CTRYAG 2 cut(s) 821, 833
BstSLI GKGCMC 1 cut(s) 63
BstUI CGCG 1 cut(s) 870
BstV1I GCAGC 3 cut(s) 403, 835, 1240
BstV2I GAAGAC 1 cut(s) 355
BstX2I RGATCY 2 cut(s) 178, 817
BstYI RGATCY 2 cut(s) 178, 817
BsuRI GGCC 3 cut(s) 61, 384, 459
BtgI CCRYGG 2 cut(s) 1130, 1324
BtsCI GGATG 2 cut(s) 123, 793
BtsIMutI CAGTG 3 cut(s) 400, 444, 444
Cac8I GCNNGC 3 cut(s) 287, 765, 1023
CciI TCATGA 1 cut(s) 1275
Cfr10I RCCGGY 1 cut(s) 484
Cfr13I GGNCC 8 cut(s) 59, 60, 329, 383, 457, 688, 1147, 1290
CseI GACGC 1 cut(s) 859
Csp6I GTAC 1 cut(s) 214
CspAI ACCGGT 1 cut(s) 484
CviAII CATG 9 cut(s) 218, 584, 683, 848, 1111, 1131, 1180, 1276, 1325
CviQI GTAC 1 cut(s) 214
DdeI CTNAG 6 cut(s) 252, 429, 505, 618, 891, 1026
DpnI GATC 4 cut(s) 180, 443, 819, 938
DpnII GATC 4 cut(s) 178, 441, 817, 936
DraI TTTAAA 1 cut(s) 771
Eam1104I CTCTTC 5 cut(s) 84, 504, 924, 1264, 1274
EarI CTCTTC 5 cut(s) 84, 504, 924, 1264, 1274
EciI GGCGGA 1 cut(s) 56
Eco130I CCWWGG 2 cut(s) 1130, 1324
Eco24I GRGCYC 3 cut(s) 63, 90, 358
Eco47I GGWCC 4 cut(s) 329, 688, 1147, 1290
Eco57I CTGAAG 4 cut(s) 65, 349, 728, 1207
EcoO109I RGGNCCY 3 cut(s) 59, 60, 1147
EcoRI GAATTC 1 cut(s) 433
EcoRII CCWGG 2 cut(s) 300, 379
EcoT14I CCWWGG 2 cut(s) 1130, 1324
EcoT22I ATGCAT 1 cut(s) 813
EcoT38I GRGCYC 3 cut(s) 63, 90, 358
ErhI CCWWGG 2 cut(s) 1130, 1324
FaeI CATG 9 cut(s) 221, 587, 686, 851, 1114, 1134, 1183, 1279, 1328
FalI AAGNNNNNCTT 2 cut(s) 747, 779
FaqI GGGAC 2 cut(s) 513, 1276
FatI CATG 9 cut(s) 217, 583, 682, 847, 1110, 1130, 1179, 1275, 1324
FauI CCCGC 2 cut(s) 294, 557
FbaI TGATCA 1 cut(s) 441
Fnu4HI GCNGC 4 cut(s) 417, 824, 827, 1254
FokI GGATG 2 cut(s) 130, 800
FriOI GRGCYC 3 cut(s) 63, 90, 358
Fsp4HI GCNGC 4 cut(s) 417, 824, 827, 1254
FspBI CTAG 4 cut(s) 420, 516, 815, 1010
GluI GCNGC 4 cut(s) 417, 824, 827, 1254
GsuI CTGGAG 2 cut(s) 284, 376
HaeIII GGCC 3 cut(s) 61, 384, 459
HapII CCGG 4 cut(s) 100, 460, 485, 1098
HgaI GACGC 1 cut(s) 859
Hin1II CATG 9 cut(s) 221, 587, 686, 851, 1114, 1134, 1183, 1279, 1328
HincII GTYRAC 2 cut(s) 373, 676
HindII GTYRAC 2 cut(s) 373, 676
HindIII AAGCTT 2 cut(s) 132, 245
HinfI GANTC 7 cut(s) 103, 369, 511, 526, 610, 731, 1272
HpaII CCGG 4 cut(s) 100, 460, 485, 1098
HphI GGTGA 5 cut(s) 133, 474, 557, 850, 1168
Hpy166II GTNNAC 3 cut(s) 373, 676, 688
Hpy188I TCNGA 7 cut(s) 243, 368, 508, 619, 747, 875, 941
Hpy188III TCNNGA 8 cut(s) 83, 590, 815, 926, 1010, 1093, 1276, 1340
Hpy8I GTNNAC 3 cut(s) 373, 676, 688
Hpy99I CGWCG 1 cut(s) 1156
HpyAV CCTTC 2 cut(s) 182, 1088
HpyCH4III ACNGT 5 cut(s) 448, 945, 1016, 1047, 1156
HpyCH4V TGCA 3 cut(s) 260, 811, 823
HpyF10VI GCNNNNNNNGC 3 cut(s) 1001, 1027, 1359
HpyF3I CTNAG 6 cut(s) 252, 429, 505, 618, 891, 1026
Hsp92II CATG 9 cut(s) 221, 587, 686, 851, 1114, 1134, 1183, 1279, 1328
KpnI GGTACC 1 cut(s) 217
Ksp22I TGATCA 1 cut(s) 441
Kzo9I GATC 4 cut(s) 178, 441, 817, 936
LguI GCTCTTC 1 cut(s) 924
LmnI GCTCC 7 cut(s) 4, 79, 85, 580, 834, 853, 1284
Lsp1109I GCAGC 3 cut(s) 403, 835, 1240
LweI GCATC 1 cut(s) 820
MaeI CTAG 4 cut(s) 420, 516, 815, 1010
MaeIII GTNAC 5 cut(s) 25, 706, 988, 1093, 1182
MalI GATC 4 cut(s) 180, 443, 819, 938
MbiI CCGCTC 1 cut(s) 564
MboI GATC 4 cut(s) 178, 441, 817, 936
MboII GAAGA 9 cut(s) 71, 139, 355, 491, 923, 941, 1196, 1281, 1291
MflI RGATCY 2 cut(s) 178, 817
MhlI GDGCHC 3 cut(s) 63, 90, 358
MluCI AATT 5 cut(s) 157, 411, 423, 433, 1329
MlyI GAGTC 4 cut(s) 112, 378, 535, 1281
MmeI TCCRAC 1 cut(s) 708
Mph1103I ATGCAT 1 cut(s) 813
MseI TTAA 1 cut(s) 770
MslI CAYNNNNRTG 3 cut(s) 543, 683, 1115
MspA1I CMGCKG 1 cut(s) 826
MspI CCGG 4 cut(s) 100, 460, 485, 1098
MspR9I CCNGG 3 cut(s) 302, 381, 461
MvaI CCWGG 2 cut(s) 302, 381
MvnI CGCG 1 cut(s) 870
MwoI GCNNNNNNNGC 3 cut(s) 1001, 1027, 1359
NciI CCSGG 1 cut(s) 461
NcoI CCATGG 2 cut(s) 1130, 1324
NdeII GATC 4 cut(s) 178, 441, 817, 936
NlaIII CATG 9 cut(s) 221, 587, 686, 851, 1114, 1134, 1183, 1279, 1328
NlaIV GGNNCC 8 cut(s) 61, 75, 87, 215, 465, 830, 1149, 1292
NmuCI GTSAC 4 cut(s) 25, 706, 988, 1093
NsiI ATGCAT 1 cut(s) 813
NspI RCATGY 2 cut(s) 587, 686
OliI CACNNNNGTG 1 cut(s) 683
PagI TCATGA 1 cut(s) 1275
PciSI GCTCTTC 1 cut(s) 924
PfeI GAWTC 3 cut(s) 511, 610, 731
PflMI CCANNNNNTGG 1 cut(s) 338
PfoI TCCNGGA 1 cut(s) 300
PinAI ACCGGT 1 cut(s) 484
PkrI GCNGC 4 cut(s) 418, 825, 828, 1255
PleI GAGTC 4 cut(s) 111, 377, 534, 1280
PpsI GAGTC 4 cut(s) 111, 377, 534, 1280
PpuMI RGGWCCY 1 cut(s) 1147
Psp5II RGGWCCY 1 cut(s) 1147
Psp6I CCWGG 2 cut(s) 300, 379
PspGI CCWGG 2 cut(s) 300, 379
PspN4I GGNNCC 8 cut(s) 61, 75, 87, 215, 465, 830, 1149, 1292
PspOMI GGGCCC 1 cut(s) 59
PspPI GGNCC 8 cut(s) 59, 60, 329, 383, 457, 688, 1147, 1290
PspPPI RGGWCCY 1 cut(s) 1147
PstI CTGCAG 1 cut(s) 825
PsuI RGATCY 2 cut(s) 178, 817
RsaI GTAC 1 cut(s) 215
RsaNI GTAC 1 cut(s) 214
RseI CAYNNNNRTG 3 cut(s) 543, 683, 1115
SapI GCTCTTC 1 cut(s) 924
SaqAI TTAA 1 cut(s) 770
SatI GCNGC 4 cut(s) 417, 824, 827, 1254
Sau3AI GATC 4 cut(s) 178, 441, 817, 936
Sau96I GGNCC 8 cut(s) 59, 60, 329, 383, 457, 688, 1147, 1290
SchI GAGTC 4 cut(s) 112, 378, 535, 1281
ScrFI CCNGG 3 cut(s) 302, 381, 461
SduI GDGCHC 3 cut(s) 63, 90, 358
SfaNI GCATC 1 cut(s) 820
SfcI CTRYAG 2 cut(s) 821, 833
SgrAI CRCCGGYG 1 cut(s) 484
SinI GGWCC 4 cut(s) 329, 688, 1147, 1290
SmiMI CAYNNNNRTG 3 cut(s) 543, 683, 1115
SmlI CTYRAG 3 cut(s) 590, 716, 1338
SmoI CTYRAG 3 cut(s) 590, 716, 1338
Sse9I AATT 5 cut(s) 157, 411, 423, 433, 1329
SsiI CCGC 6 cut(s) 41, 68, 287, 564, 826, 1360
SspI AATATT 1 cut(s) 1074
SspMI CTAG 4 cut(s) 420, 516, 815, 1010
StyD4I CCNGG 3 cut(s) 300, 379, 459
StyI CCWWGG 2 cut(s) 1130, 1324
TaaI ACNGT 5 cut(s) 448, 945, 1016, 1047, 1156
TasI AATT 5 cut(s) 157, 411, 423, 433, 1329
TauI GCSGC 1 cut(s) 829
TfiI GAWTC 3 cut(s) 511, 610, 731
Tru1I TTAA 1 cut(s) 770
Tru9I TTAA 1 cut(s) 770
TscAI CASTG 3 cut(s) 400, 444, 451
TseFI GTSAC 4 cut(s) 25, 706, 988, 1093
TseI GCWGC 3 cut(s) 416, 823, 1253
Tsp45I GTSAC 4 cut(s) 25, 706, 988, 1093
TspDTI ATGAA 4 cut(s) 623, 656, 1127, 1292
TspGWI ACGGA 3 cut(s) 48, 1151, 1160
TspRI CASTG 3 cut(s) 400, 444, 451
Van91I CCANNNNNTGG 1 cut(s) 338
VpaK11BI GGWCC 4 cut(s) 329, 688, 1147, 1290
XapI RAATTY 2 cut(s) 157, 433
XbaI TCTAGA 2 cut(s) 814, 1009
XceI RCATGY 2 cut(s) 587, 686
XspI CTAG 4 cut(s) 420, 516, 815, 1010
Zsp2I ATGCAT 1 cut(s) 813
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.