Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0009212

Physical Location & Seq

Genomic Coordinates Reverse (-)

1841876 .. 1846949

Gene Structure 5074 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G05120.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2928 bp

ATGTTGACAGACTGTGACATACATTGTTTTACTATTGAGCCTTATCCTGATCTGACTGTTTCAGAAGTCTGGCAACATGAGATTGTTGGCACTGATGGTGATTCTGGTATCAAGAAAGATATAGCTAGTCAAAAGCAGATTTGGCCTCTAGATTTGCAGGTAGATGATCAGGGTAAAGTGATTACAGTTCTTGTTGCCACTATCTGCATGGACCGCGCCAGCAGTTCTAGCTATACACAATATTCGCTTTTAACCCTACAACATAAATCTGAGATGAGATTTGCAGATGGGAGAGAGGAAAAGGTTCTGGAGAAACAAGGTCCAATCCAAGTCATAATCCCAAAAGCAAGAGTAGAGGATAAAGACTTCTTATTCTCTATGAGACTCAGAGTTGGTGGTAGACCCCCAGGGTCAGCTATAATTCTTTCAGGTGATGGAACAGCCACAGTTTGCTACTGTCATGGAAGTTCTACCCGGCTCTATAAGTTTGATTTACCTTATGATGCTGGCAAGGTTTTGGATGCTTCAGTTCTTTCCTCCACTGATGAACATGAATATGGTGCATGGACTGTACTAACTGAGAAAGCAGGAGTGTGGGCAATACCAGAGAAAGCAGTTGTGCTTGGTGGAGTCGAACCTCCAGAGAGAAGTCTGTCACGCAAAAATAGCTCCAATGAGAGGTCTACACGAGATGAGACAAGGGTAACACCATATGGTGTTGATAGAACTGCCGGAAGGGAGAATTCTGACATACAGAATATTGAAGACAAAGGAAACCCTAAAATGGGTTTTACTCGTCAAACAGCCCGTGATGAGGAATCAGAAGCTTTGCTTGGCCAGCTCTTTGAGGGGTTTCTGTTATCTGGGAAAGTTGATGGATCCTTGGAGAAGCTTAGTCAGTCTGGTGCATTTGATAGAGATGGAGAGGCCAATGTTTTTGCTCGCAAAAGCAAATCTATAGTTGACACATTAGCTAAGCATTGGACAACAACTAGAGGGGCTGAGATAGTAGCTATGACTGTTATATCTTCACAATTGGTTGAGAAACAACAGAAGCATGAGAATTTTCTACACTTTCTTGCTCTATCCAAATGCCATGAGGAGCTGTGTTCTAAACAGAGACATTCTTTGCAAATAATTCTGGAAAATGGTGAAAAACTTGCTGCCATGATTCAACTCCGGGAACTGCAGAATATGATTAACCAAAACCGCTCAGCTAGATTTGGCTCGCCGCAAGCTGGCTCAGAGGATCAAGTTTCATGTGCCCTTTGGGATCTTATTCAATTTGTAGGGGAGAGAGCCCGGAGAAATACAGTTCTTTTGATGGACAGAGATAATGCTGAAGTTTTCTACAGCAAGGTATCTGAACTTGAGGAAGTGTTTTACTGTCTGAACAGGCAACTAGAATACATAATCAGAGCTGACCAACCACTAGGAACTCAACTGCAGAGAGCCTGCGAACTCTCAAATGCATGTGTTACAATTCTTCAGACTGCCTTAGATTACAAAAACGAGCATCAAATGTGGTATCCACCACTTGAAGGTTTAATACCTTGGCACTCTCAGACTGTTGTATGTAATGGACTGTGGTGCATTGCGTCCTTTATGCTTCATCTGTTAACTGAGGCATCTAGGATTGATATCTCTGCTAAATCAGACATATACACGCATCTCGAAGTGCTTACTGAAGTTTTACTTGAGGCTTGTGCCGGTTCTACCTTTGCAAAATTGGAGAGGGAAGAGGAGAACAAAGGTTTGCTTAATGAATACTGGACTCGGCGGGATACTATTTTTGACTCTCTTTATCGACAAGCGAAAGAGTTTATGGAAGCAGAAATCCAGGGCATCAGAGAAAGAACTGAAGCGACAGATGAAGATATCTTCAGAAACCGTTGTTCAAATTTGATTTCCATTGCAAAGCGACATGCAGGCTATAAAATTATGTGGAAGATATGTTATGATCTTAATGATACAGGACTGCTCAGAAACTTAATGCACGAGGGTGTGGGACCACAAGGAGGGTTCAGTTACTTTGTTTTCCAGCAACTCTATGATATGAAACAGTTCTCTAAGCTTCTACGGCTTGGAGAAGAATTCCAGGACGAGCTATTGATATTTCTAAAGCGCCATTCTGATCTGGTGTGGCTTCATCAGGTGTTTCTTCATCAATTCTCATCTGCGTCTGACACTCTTCATACATTGGCTCTATCACAAGATGAAGAGTCTATGACAACTGTTGAAGAAAGAACGGGACCAGAACCTGAAGATGTACAACCAACATTCGCAGACCGCAAGCGGTTTCTGAACCTTTCAAAGATAGCCTATGTGGCAGATAAGGATGCTGATTCCGAATCGAAAGTGAAGCGCATTGAAGCTGATCTCAACTTACTGAAGCTGCAGGAAGAAATAACAAAAGCTTTGCCAAATGGAGAAGCTAGAAACCGGCTCTTCCGACCAGAGGAGCTCATTGAAACCTGTCTCAATATCCAGGGTCGATGGACAGCTATAAAGGCTTTCGAAGTATTTGCATGGACGAGCTCTTCGTTCCGTGAGAATCATAGGAGTCTTTTGGAAGAATGCTGGAGAAATGCTGCGGATCAAGACGACTGGGACAGGCATCATCAAGCCTCTACTAATGAAGGTTGGAGCGAGGAAGAAACATTACAGAATCTAAGGAACACGGCCCTTTTCCAGGCTTCCAAAAGGTGTTACGGACCAACCCGAGTCAACACTTTTGATGGTGACTTTGCACAAGTCCTTCCTCTGAGAAGAGAGAACCCTGAGGATTCAACTTCTTCTGTAGAGGACGTTTTGATGAGTCATAAAGATTTCGCTGAGGCAGGGAAATTAATGCTAACTGCAATCATGCTTGGTTGTGTAGAAGAAGAGGGTATTGTAGCAGAAGAGTTCTCATCTCCAATGGAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000972 GO:0003674 GO:0005198 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005643 GO:0005737 GO:0006325 GO:0006355 GO:0006403 GO:0006405 GO:0006606 GO:0006810 GO:0006886 GO:0006913 GO:0006996 GO:0006997 GO:0008104 GO:0008150 GO:0009507 GO:0009536 GO:0009889 GO:0009987 GO:0010468 GO:0010556 GO:0012505 GO:0015031 GO:0015833 GO:0015931 GO:0016043 GO:0017038 GO:0017056 GO:0019219 GO:0019222 GO:0031080 GO:0031081 GO:0031323 GO:0031326 GO:0031503 GO:0031967 GO:0031975 GO:0032991 GO:0033036 GO:0033365 GO:0034504 GO:0034613 GO:0034629 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0045184 GO:0046907 GO:0050657 GO:0050658 GO:0050789 GO:0050794 GO:0051168 GO:0051169 GO:0051170 GO:0051171 GO:0051179 GO:0051234 GO:0051236 GO:0051252 GO:0051276 GO:0051641 GO:0051649 GO:0051664 GO:0051668 GO:0060255 GO:0065007 GO:0070727 GO:0071702 GO:0071705 GO:0071840 GO:0072594 GO:0080090 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko03013 map03013

Pfam Domains

Protein Families

Nucleoporin_C Nucleoporin_N

Protein Analysis

975

Amino Acids

110.84

Weight (kDa)

5.09

Isoelectric Point (pI)

45.9

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Nucleoporin_N	PF08801	2 - 199	3.9e-22	Nup133 N terminal like
Nucleoporin_C	PF03177	675 - 807	2.9e-08	Non-repetitive/WGA-negative nucleoporin C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009212)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G05120 AT2G05120
fragaria_vesca	FvH4_6g40930 FvH4_6g40930 FvH4_6g40930 FvH4_6g40930 FvH4_6g40930
malus_domestica	MD17G1113600.v1.1
prunus_persica	Prupe.3G200800_v2.0.a1
pyrus_communis	pycom17g10520
rosa_chinensis	RchiOBHm_Chr2g0156551
rosa_laevigata	RLG00000020920
rosa_multiflora	Rmu_sc0002717.1_g000003
rosa_roxburghii	Rroxscaffold_2G00092950
rosa_rugosa	Rorug02G0454100 Rorug02G0454200 Rorug02G0454300
rosa_samantha	Rh2AG520000 Rh2BG532500 Rh2CG505000 Rh2DG541400
rosa_wichuraiana	Rw2G042870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	148
AccBSI	CCGCTC	1 cut(s)	1212
AccI	GTMKAC	2 cut(s)	400, 683
AccII	CGCG	1 cut(s)	216
AciI	CCGC	7 cut(s)	214, 1210, 1232, 1780, 2290, 2296, 2594
AclWI	GGATC	5 cut(s)	873, 886, 1257, 1281, 2604
AcoI	YGGCCR	1 cut(s)	835
AcsI	RAATTY	4 cut(s)	742, 1063, 1900, 2093
AcuI	CTGAAG	8 cut(s)	510, 1362, 1472, 1707, 1867, 1881, 2283, 2411
AfaI	GTAC	2 cut(s)	573, 2271
AfiI	CCNNNNNNNGG	9 cut(s)	678, 784, 785, 814, 1238, 1541, 2018, 2458, 2692
AjnI	CCWGG	5 cut(s)	406, 1839, 2097, 2487, 2691
AjuI	GAANNNNNNNTTGG	2 cut(s)	816, 848
AleI	CACNNNNGTG	1 cut(s)	2001
Alw21I	GWGCWC	2 cut(s)	2466, 2540
Alw26I	GTCTC	4 cut(s)	376, 689, 1114, 2483
AlwI	GGATC	5 cut(s)	873, 886, 1257, 1281, 2604
AlwNI	CAGNNNCTG	1 cut(s)	2261
Ama87I	CYCGRG	1 cut(s)	2721
AoxI	GGCC	4 cut(s)	143, 835, 927, 2682
ApeKI	GCWGC	3 cut(s)	1163, 2395, 2591
ApoI	RAATTY	4 cut(s)	742, 1063, 1900, 2093
ArsI	GACNNNNNNTTYG	2 cut(s)	2524, 2556
AseI	ATTAAT	1 cut(s)	2849
Asp700I	GAANNNNTTC	2 cut(s)	303, 2063
AspLEI	GCGC	3 cut(s)	218, 2127, 2367
AspS9I	GGNCC	6 cut(s)	211, 320, 2009, 2252, 2683, 2714
AsuC2I	CCSGG	3 cut(s)	475, 1181, 1303
AsuHPI	GGTGA	4 cut(s)	110, 443, 1163, 2753
AsuII	TTCGAA	1 cut(s)	2517
AvaI	CYCGRG	1 cut(s)	2721
AvaII	GGWCC	5 cut(s)	211, 320, 2009, 2252, 2714
AxyI	CCTNAGG	1 cut(s)	2781
BaeGI	GKGCMC	1 cut(s)	1267
BalI	TGGCCA	1 cut(s)	837
BamHI	GGATCC	1 cut(s)	878
BanII	GRGCYC	3 cut(s)	1303, 2466, 2540
BarI	GAAGNNNNNNTAC	4 cut(s)	1533, 1565, 2646, 2678
BauI	CACGAG	2 cut(s)	687, 1997
BbsI	GAAGAC	1 cut(s)	771
Bbv12I	GWGCWC	2 cut(s)	2466, 2540
BbvCI	CCTCAGC	1 cut(s)	2835
BbvI	GCAGC	3 cut(s)	1150, 2382, 2578
BccI	CCATC	8 cut(s)	89, 281, 428, 869, 914, 1318, 2490, 2732
BceAI	ACGGC	2 cut(s)	2096, 2697
BcgI	CGANNNNNNTGC	2 cut(s)	2507, 2541
BciT130I	CCWGG	5 cut(s)	408, 1841, 2099, 2489, 2693
BciVI	GTATCC	2 cut(s)	1539, 1777
BclI	TGATCA	1 cut(s)	166
BcnI	CCSGG	3 cut(s)	475, 1181, 1303
BcoDI	GTCTC	4 cut(s)	376, 689, 1114, 2483
BfaI	CTAG	9 cut(s)	126, 149, 228, 993, 1218, 1403, 1433, 1632, 2436
BfmI	CTRYAG	6 cut(s)	957, 1187, 1351, 1445, 2396, 2799
BfoI	RGCGCY	1 cut(s)	2128
BfuAI	ACCTGC	1 cut(s)	148
BfuI	GTATCC	2 cut(s)	1539, 1777
BglI	GCCNNNNNGGC	1 cut(s)	2327
BisI	GCNGC	4 cut(s)	1164, 1232, 2396, 2592
BlpI	GCTNAGC	2 cut(s)	975, 1213
BlsI	GCNGC	4 cut(s)	1165, 1233, 2397, 2593
Bme1390I	CCNGG	8 cut(s)	408, 475, 1181, 1303, 1841, 2099, 2489, 2693
Bme18I	GGWCC	5 cut(s)	211, 320, 2009, 2252, 2714
BmeT110I	CYCGRG	1 cut(s)	2721
BmgT120I	GGNCC	6 cut(s)	211, 320, 2009, 2252, 2683, 2714
BmiI	GGNNCC	3 cut(s)	880, 2010, 2253
BmrFI	CCNGG	8 cut(s)	408, 475, 1181, 1303, 1841, 2099, 2489, 2693
BmrI	ACTGGG	1 cut(s)	2617
BmsI	GCATC	8 cut(s)	493, 511, 1525, 1637, 1678, 1854, 2329, 2626
BmuI	ACTGGG	1 cut(s)	2617
BpiI	GAAGAC	1 cut(s)	771
BpmI	CTGGAG	3 cut(s)	329, 624, 2602
Bpu10I	CCTNAGC	1 cut(s)	2835
Bpu1102I	GCTNAGC	2 cut(s)	975, 1213
Bpu14I	TTCGAA	1 cut(s)	2517
BpuEI	CTTGAG	2 cut(s)	1391, 1718
BpuMI	CCSGG	3 cut(s)	475, 1181, 1303
BsaBI	GATNNNNATC	1 cut(s)	1640
BsaJI	CCNNGG	6 cut(s)	406, 407, 882, 1553, 1840, 2488
Bsc4I	CCNNNNNNNGG	9 cut(s)	678, 784, 785, 814, 1238, 1541, 2018, 2458, 2692
Bse118I	RCCGGY	2 cut(s)	1709, 2442
Bse1I	ACTGG	2 cut(s)	1775, 2612
Bse21I	CCTNAGG	1 cut(s)	2781
Bse3DI	GCAATG	2 cut(s)	1593, 1911
Bse8I	GATNNNNATC	1 cut(s)	1640
BseBI	CCWGG	5 cut(s)	408, 1841, 2099, 2489, 2693
BseDI	CCNNGG	6 cut(s)	406, 407, 882, 1553, 1840, 2488
BseGI	GGATG	2 cut(s)	526, 2344
BseJI	GATNNNNATC	1 cut(s)	1640
BseLI	CCNNNNNNNGG	9 cut(s)	678, 784, 785, 814, 1238, 1541, 2018, 2458, 2692
BseMI	GCAATG	2 cut(s)	1593, 1911
BseNI	ACTGG	2 cut(s)	1775, 2612
BseRI	GAGGAG	3 cut(s)	1115, 1757, 2474
BseSI	GKGCMC	1 cut(s)	1267
BseXI	GCAGC	3 cut(s)	1150, 2382, 2578
Bsh1236I	CGCG	1 cut(s)	216
BshFI	GGCC	4 cut(s)	145, 837, 929, 2684
BsiHKAI	GWGCWC	2 cut(s)	2466, 2540
BsiHKCI	CYCGRG	1 cut(s)	2721
BsiSI	CCGG	6 cut(s)	475, 732, 1180, 1303, 1710, 2443
BslFI	GGGAC	3 cut(s)	2022, 2265, 2624
BslI	CCNNNNNNNGG	9 cut(s)	678, 784, 785, 814, 1238, 1541, 2018, 2458, 2692
BsmAI	GTCTC	4 cut(s)	376, 689, 1114, 2483
BsmFI	GGGAC	3 cut(s)	2022, 2265, 2624
BsmI	GAATGC	1 cut(s)	2582
BsnI	GGCC	4 cut(s)	145, 837, 929, 2684
BsoBI	CYCGRG	1 cut(s)	2721
Bsp119I	TTCGAA	1 cut(s)	2517
Bsp1286I	GDGCHC	4 cut(s)	1267, 1303, 2466, 2540
Bsp1407I	TGTACA	1 cut(s)	2269
Bsp143I	GATC	9 cut(s)	49, 166, 878, 1249, 1273, 1960, 2134, 2377, 2596
Bsp1720I	GCTNAGC	2 cut(s)	975, 1213
BspACI	CCGC	7 cut(s)	214, 1210, 1232, 1780, 2290, 2296, 2594
BspANI	GGCC	4 cut(s)	145, 837, 929, 2684
BspFNI	CGCG	1 cut(s)	216
BspLI	GGNNCC	3 cut(s)	880, 2010, 2253
BspMAI	CTGCAG	3 cut(s)	1191, 1449, 2400
BspMI	ACCTGC	1 cut(s)	148
BspPI	GGATC	5 cut(s)	873, 886, 1257, 1281, 2604
BspQI	GCTCTTC	2 cut(s)	2453, 2545
BspT104I	TTCGAA	1 cut(s)	2517
BsrBI	CCGCTC	1 cut(s)	1212
BsrDI	GCAATG	2 cut(s)	1593, 1911
BsrFI	RCCGGY	2 cut(s)	1709, 2442
BsrGI	TGTACA	1 cut(s)	2269
BsrI	ACTGG	2 cut(s)	1775, 2612
BssAI	RCCGGY	2 cut(s)	1709, 2442
BssECI	CCNNGG	6 cut(s)	406, 407, 882, 1553, 1840, 2488
BssMI	GATC	9 cut(s)	49, 166, 878, 1249, 1273, 1960, 2134, 2377, 2596
BssSI	CACGAG	2 cut(s)	687, 1997
BssT1I	CCWWGG	2 cut(s)	882, 1553
Bst2BI	CACGAG	2 cut(s)	687, 1997
Bst2UI	CCWGG	5 cut(s)	408, 1841, 2099, 2489, 2693
Bst6I	CTCTTC	8 cut(s)	1734, 2196, 2214, 2453, 2545, 2764, 2880, 2898
BstAUI	TGTACA	1 cut(s)	2269
BstBI	TTCGAA	1 cut(s)	2517
BstENI	CCTNNNNNAGG	1 cut(s)	2690
BstF5I	GGATG	2 cut(s)	526, 2344
BstFNI	CGCG	1 cut(s)	216
BstH2I	RGCGCY	1 cut(s)	2128
BstHHI	GCGC	3 cut(s)	218, 2127, 2367
BstKTI	GATC	9 cut(s)	52, 169, 881, 1252, 1276, 1963, 2137, 2380, 2599
BstMAI	GTCTC	4 cut(s)	376, 689, 1114, 2483
BstMBI	GATC	9 cut(s)	49, 166, 878, 1249, 1273, 1960, 2134, 2377, 2596
BstMWI	GCNNNNNNNGC	8 cut(s)	142, 213, 228, 666, 838, 2080, 2327, 2510
BstNI	CCWGG	5 cut(s)	408, 1841, 2099, 2489, 2693
BstNSI	RCATGY	2 cut(s)	1476, 1928
BstSCI	CCNGG	8 cut(s)	406, 473, 1179, 1301, 1839, 2097, 2487, 2691
BstSFI	CTRYAG	6 cut(s)	957, 1187, 1351, 1445, 2396, 2799
BstSLI	GKGCMC	1 cut(s)	1267
BstUI	CGCG	1 cut(s)	216
BstV1I	GCAGC	3 cut(s)	1150, 2382, 2578
BstV2I	GAAGAC	1 cut(s)	771
BstX2I	RGATCY	2 cut(s)	878, 1273
BstYI	RGATCY	2 cut(s)	878, 1273
Bsu36I	CCTNAGG	1 cut(s)	2781
BsuI	GTATCC	2 cut(s)	1539, 1777
BsuRI	GGCC	4 cut(s)	145, 837, 929, 2684
BtsCI	GGATG	2 cut(s)	526, 2344
BtsIMutI	CAGTG	2 cut(s)	90, 540
BveI	ACCTGC	1 cut(s)	148
CaiI	CAGNNNCTG	1 cut(s)	2261
CfoI	GCGC	3 cut(s)	218, 2127, 2367
Cfr10I	RCCGGY	2 cut(s)	1709, 2442
Cfr13I	GGNCC	6 cut(s)	211, 320, 2009, 2252, 2683, 2714
CseI	GACGC	2 cut(s)	1587, 2169
Csp6I	GTAC	2 cut(s)	572, 2270
CviQI	GTAC	2 cut(s)	572, 2270
DpnI	GATC	9 cut(s)	51, 168, 880, 1251, 1275, 1962, 2136, 2379, 2598
DpnII	GATC	9 cut(s)	49, 166, 878, 1249, 1273, 1960, 2134, 2377, 2596
EaeI	YGGCCR	1 cut(s)	835
Eam1104I	CTCTTC	8 cut(s)	1734, 2196, 2214, 2453, 2545, 2764, 2880, 2898
EarI	CTCTTC	8 cut(s)	1734, 2196, 2214, 2453, 2545, 2764, 2880, 2898
Ecl136II	GAGCTC	2 cut(s)	2464, 2538
Eco130I	CCWWGG	2 cut(s)	882, 1553
Eco24I	GRGCYC	3 cut(s)	1303, 2466, 2540
Eco32I	GATATC	2 cut(s)	1642, 1879
Eco47I	GGWCC	5 cut(s)	211, 320, 2009, 2252, 2714
Eco53kI	GAGCTC	2 cut(s)	2464, 2538
Eco57I	CTGAAG	8 cut(s)	510, 1362, 1472, 1707, 1867, 1881, 2283, 2411
Eco81I	CCTNAGG	1 cut(s)	2781
Eco88I	CYCGRG	1 cut(s)	2721
EcoICRI	GAGCTC	2 cut(s)	2464, 2538
EcoNI	CCTNNNNNAGG	1 cut(s)	2690
EcoRI	GAATTC	2 cut(s)	742, 2093
EcoRII	CCWGG	5 cut(s)	406, 1839, 2097, 2487, 2691
EcoRV	GATATC	2 cut(s)	1642, 1879
EcoT14I	CCWWGG	2 cut(s)	882, 1553
EcoT22I	ATGCAT	1 cut(s)	1474
EcoT38I	GRGCYC	3 cut(s)	1303, 2466, 2540
ErhI	CCWWGG	2 cut(s)	882, 1553
FalI	AAGNNNNNCTT	6 cut(s)	816, 848, 1680, 1712, 1743, 1775
FaqI	GGGAC	3 cut(s)	2022, 2265, 2624
FauI	CCCGC	1 cut(s)	1773
FauNDI	CATATG	1 cut(s)	712
FbaI	TGATCA	1 cut(s)	166
FblI	GTMKAC	2 cut(s)	400, 683
Fnu4HI	GCNGC	4 cut(s)	1164, 1232, 2396, 2592
FokI	GGATG	2 cut(s)	533, 2351
FriOI	GRGCYC	3 cut(s)	1303, 2466, 2540
Fsp4HI	GCNGC	4 cut(s)	1164, 1232, 2396, 2592
FspBI	CTAG	9 cut(s)	126, 149, 228, 993, 1218, 1403, 1433, 1632, 2436
GlaI	GCGC	3 cut(s)	217, 2126, 2366
GluI	GCNGC	4 cut(s)	1164, 1232, 2396, 2592
GsuI	CTGGAG	3 cut(s)	329, 624, 2602
HaeII	RGCGCY	1 cut(s)	2128
HaeIII	GGCC	4 cut(s)	145, 837, 929, 2684
HapII	CCGG	6 cut(s)	475, 732, 1180, 1303, 1710, 2443
HgaI	GACGC	2 cut(s)	1587, 2169
HhaI	GCGC	3 cut(s)	218, 2127, 2367
Hin6I	GCGC	3 cut(s)	216, 2125, 2365
HinP1I	GCGC	3 cut(s)	216, 2125, 2365
HincII	GTYRAC	4 cut(s)	6, 964, 1620, 2728
HindII	GTYRAC	4 cut(s)	6, 964, 1620, 2728
HindIII	AAGCTT	4 cut(s)	825, 890, 2072, 2415
HpaI	GTTAAC	1 cut(s)	1620
HpaII	CCGG	6 cut(s)	475, 732, 1180, 1303, 1710, 2443
HphI	GGTGA	4 cut(s)	110, 443, 1163, 2753
Hpy166II	GTNNAC	6 cut(s)	6, 401, 684, 964, 1620, 2728
Hpy188III	TCNNGA	8 cut(s)	47, 112, 149, 308, 641, 1142, 1673, 2600
Hpy8I	GTNNAC	6 cut(s)	6, 401, 684, 964, 1620, 2728
HpyAV	CCTTC	4 cut(s)	729, 1535, 2633, 2768
HpyCH4IV	ACGT	1 cut(s)	2808
HpyF10VI	GCNNNNNNNGC	8 cut(s)	142, 213, 228, 666, 838, 2080, 2327, 2510
HpySE526I	ACGT	1 cut(s)	2808
HspAI	GCGC	3 cut(s)	216, 2125, 2365
Ksp22I	TGATCA	1 cut(s)	166
KspAI	GTTAAC	1 cut(s)	1620
Kzo9I	GATC	9 cut(s)	49, 166, 878, 1249, 1273, 1960, 2134, 2377, 2596
LguI	GCTCTTC	2 cut(s)	2453, 2545
LmnI	GCTCC	4 cut(s)	674, 1102, 2461, 2646
Lsp1109I	GCAGC	3 cut(s)	1150, 2382, 2578
LweI	GCATC	8 cut(s)	493, 511, 1525, 1637, 1678, 1854, 2329, 2626
MaeI	CTAG	9 cut(s)	126, 149, 228, 993, 1218, 1403, 1433, 1632, 2436
MaeII	ACGT	1 cut(s)	2808
MaeIII	GTNAC	7 cut(s)	14, 654, 703, 1477, 2027, 2708, 2741
MalI	GATC	9 cut(s)	51, 168, 880, 1251, 1275, 1962, 2136, 2379, 2598
MbiI	CCGCTC	1 cut(s)	1212
MboI	GATC	9 cut(s)	49, 166, 878, 1249, 1273, 1960, 2134, 2377, 2596
MfeI	CAATTG	1 cut(s)	1034
MflI	RGATCY	2 cut(s)	878, 1273
MhlI	GDGCHC	4 cut(s)	1267, 1303, 2466, 2540
MlsI	TGGCCA	1 cut(s)	837
MluNI	TGGCCA	1 cut(s)	837
MlyI	GAGTC	8 cut(s)	378, 639, 1768, 1790, 2231, 2572, 2733, 2827
MmeI	TCCRAC	2 cut(s)	2476, 2624
Mox20I	TGGCCA	1 cut(s)	837
Mph1103I	ATGCAT	1 cut(s)	1474
MroXI	GAANNNNTTC	2 cut(s)	303, 2063
MscI	TGGCCA	1 cut(s)	837
MseI	TTAA	8 cut(s)	251, 1200, 1547, 1619, 1761, 1965, 1991, 2849
MslI	CAYNNNNRTG	2 cut(s)	555, 2001
Msp20I	TGGCCA	1 cut(s)	837
MspI	CCGG	6 cut(s)	475, 732, 1180, 1303, 1710, 2443
MspR9I	CCNGG	8 cut(s)	408, 475, 1181, 1303, 1841, 2099, 2489, 2693
MunI	CAATTG	1 cut(s)	1034
Mva1269I	GAATGC	1 cut(s)	2582
MvaI	CCWGG	5 cut(s)	408, 1841, 2099, 2489, 2693
MvnI	CGCG	1 cut(s)	216
MwoI	GCNNNNNNNGC	8 cut(s)	142, 213, 228, 666, 838, 2080, 2327, 2510
NciI	CCSGG	3 cut(s)	475, 1181, 1303
NdeI	CATATG	1 cut(s)	712
NdeII	GATC	9 cut(s)	49, 166, 878, 1249, 1273, 1960, 2134, 2377, 2596
NlaIV	GGNNCC	3 cut(s)	880, 2010, 2253
NmeAIII	GCCGAG	1 cut(s)	1756
NmuCI	GTSAC	3 cut(s)	14, 654, 2741
NsiI	ATGCAT	1 cut(s)	1474
NspI	RCATGY	2 cut(s)	1476, 1928
NspV	TTCGAA	1 cut(s)	2517
OliI	CACNNNNGTG	1 cut(s)	2001
PasI	CCCWGGG	1 cut(s)	407
PciSI	GCTCTTC	2 cut(s)	2453, 2545
PcsI	WCGNNNNNNNCGW	1 cut(s)	2540
PctI	GAATGC	1 cut(s)	2582
PdmI	GAANNNNTTC	2 cut(s)	303, 2063
PfeI	GAWTC	8 cut(s)	101, 818, 1171, 2345, 2351, 2554, 2668, 2786
PfoI	TCCNGGA	2 cut(s)	1179, 2097
PkrI	GCNGC	4 cut(s)	1165, 1233, 2397, 2593
PleI	GAGTC	8 cut(s)	378, 638, 1768, 1790, 2230, 2571, 2732, 2826
PpsI	GAGTC	8 cut(s)	378, 638, 1768, 1790, 2230, 2571, 2732, 2826
PshBI	ATTAAT	1 cut(s)	2849
Psp124BI	GAGCTC	2 cut(s)	2466, 2540
Psp6I	CCWGG	5 cut(s)	406, 1839, 2097, 2487, 2691
PspGI	CCWGG	5 cut(s)	406, 1839, 2097, 2487, 2691
PspN4I	GGNNCC	3 cut(s)	880, 2010, 2253
PspPI	GGNCC	6 cut(s)	211, 320, 2009, 2252, 2683, 2714
PstI	CTGCAG	3 cut(s)	1191, 1449, 2400
PstNI	CAGNNNCTG	1 cut(s)	2261
PsuI	RGATCY	2 cut(s)	878, 1273
RsaI	GTAC	2 cut(s)	573, 2271
RsaNI	GTAC	2 cut(s)	572, 2270
RseI	CAYNNNNRTG	2 cut(s)	555, 2001
SacI	GAGCTC	2 cut(s)	2466, 2540
SapI	GCTCTTC	2 cut(s)	2453, 2545
SaqAI	TTAA	8 cut(s)	251, 1200, 1547, 1619, 1761, 1965, 1991, 2849
SatI	GCNGC	4 cut(s)	1164, 1232, 2396, 2592
Sau3AI	GATC	9 cut(s)	49, 166, 878, 1249, 1273, 1960, 2134, 2377, 2596
Sau96I	GGNCC	6 cut(s)	211, 320, 2009, 2252, 2683, 2714
SchI	GAGTC	8 cut(s)	378, 639, 1768, 1790, 2231, 2572, 2733, 2827
ScrFI	CCNGG	8 cut(s)	408, 475, 1181, 1303, 1841, 2099, 2489, 2693
SduI	GDGCHC	4 cut(s)	1267, 1303, 2466, 2540
SfaNI	GCATC	8 cut(s)	493, 511, 1525, 1637, 1678, 1854, 2329, 2626
SfcI	CTRYAG	6 cut(s)	957, 1187, 1351, 1445, 2396, 2799
SfuI	TTCGAA	1 cut(s)	2517
SinI	GGWCC	5 cut(s)	211, 320, 2009, 2252, 2714
SmiMI	CAYNNNNRTG	2 cut(s)	555, 2001
SmlI	CTYRAG	2 cut(s)	1370, 1697
SmoI	CTYRAG	2 cut(s)	1370, 1697
SsiI	CCGC	7 cut(s)	214, 1210, 1232, 1780, 2290, 2296, 2594
SspI	AATATT	2 cut(s)	242, 760
SspMI	CTAG	9 cut(s)	126, 149, 228, 993, 1218, 1403, 1433, 1632, 2436
SstI	GAGCTC	2 cut(s)	2466, 2540
StyD4I	CCNGG	8 cut(s)	406, 473, 1179, 1301, 1839, 2097, 2487, 2691
StyI	CCWWGG	2 cut(s)	882, 1553
TaiI	ACGT	1 cut(s)	2811
TaqI	TCGA	6 cut(s)	633, 1674, 1807, 2354, 2494, 2517
TatI	WGTACW	2 cut(s)	571, 2269
TauI	GCSGC	1 cut(s)	1234
TfiI	GAWTC	8 cut(s)	101, 818, 1171, 2345, 2351, 2554, 2668, 2786
Tru1I	TTAA	8 cut(s)	251, 1200, 1547, 1619, 1761, 1965, 1991, 2849
Tru9I	TTAA	8 cut(s)	251, 1200, 1547, 1619, 1761, 1965, 1991, 2849
TscAI	CASTG	2 cut(s)	97, 547
TseFI	GTSAC	3 cut(s)	14, 654, 2741
TseI	GCWGC	3 cut(s)	1163, 2395, 2591
Tsp45I	GTSAC	3 cut(s)	14, 654, 2741
TspGWI	ACGGA	2 cut(s)	2537, 2727
TspRI	CASTG	2 cut(s)	97, 547
VpaK11BI	GGWCC	5 cut(s)	211, 320, 2009, 2252, 2714
VspI	ATTAAT	1 cut(s)	2849
XagI	CCTNNNNNAGG	1 cut(s)	2690
XapI	RAATTY	4 cut(s)	742, 1063, 1900, 2093
XbaI	TCTAGA	1 cut(s)	148
XceI	RCATGY	2 cut(s)	1476, 1928
XcmI	CCANNNNNNNNNTGG	1 cut(s)	205
XmiI	GTMKAC	2 cut(s)	400, 683
XmnI	GAANNNNTTC	2 cut(s)	303, 2063
XspI	CTAG	9 cut(s)	126, 149, 228, 993, 1218, 1403, 1433, 1632, 2436
Zsp2I	ATGCAT	1 cut(s)	1474

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.