Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp03

Orthogroup ID

OG0009212

Physical Location & Seq

Genomic Coordinates Forward (+)

20948886 .. 20955728

Gene Structure 6843 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.3G200800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3948 bp

ATGTTCTCACCAGGAACTAAGCGATCCAATGTGAACCCTCGTCGGGACCCAGGATCTCCGGCCACTCCTCTCGTCGAGAACCGGCGATCTGTTTCCGATAACCCGGTCCCGAACCGGCCCAGTACCGGAACTCCGGCTCCCTGGGCTCCTCGCTTATCTGTTCTCGCCAGAGTTTTACCAGCGAACCAAAGTGAGAAAGGGGATGAAATTAAGCCTGTATATGTTGGAGAGTTTCCCCAAGTTGTTCGTGATGAACAGGCCAGTATGGTCCAGAAGCATGTTCATGGTGATACATATGTATCTGGTGGAATGGAGAGGGGAACATCTTTGGCATGGATTATATGCGGAAACAGACTCTTCGTGTGGAGTTATCTGTCTCCTGCAGCATCGATCAATTGCATTGTTCTTGAAATCCCTGCAAAAGTTTTTGAAGGTGGGGATGTGGGCAGAAGTGGTGGGAACTGTTGGTTGCTTTGTGTTGTCAATTGGGATAGCACGTCTACAAGAACAAAGAAAGTTGTTAAACACTGTAGCTCTGCTGGTATTGTATTGTGTAACAAAAAAACTCGAGCTGCGGTGTACTGGCCTGACATTTATGCTGAAGGCAGAACTGCCCCCGTTGTTAGTGTTGCATCTTCTGATGAATTGGAGGCAAATTCTTCGCCTATTGATAGGAAGACCACCCCAAAGCGACAGCAACTAAATATGCGGCACAGGAGTAGTTTGACTGGGTTTTGTACATTTAACTCTTTGATTGCTTCTGCAGTCCCTGATTCCCAGAATATGTGTGTTGCGCTTGCCTGTAGTTCAGATGGCGAGCTATGGCAGTTTCATTGCAGCCCATCTGGTGTTAGCCGTAAGAAAGTATATAGGGACAATCAGACTCTTTCCTCCCAAGGGGGTGACAATGGTCAAAACCTAGGGAGCAAGGGTTATCCAAGGTCACTGACCTGGTGTGTTCCAAGTCTTCCTATGCAGGAATCTAACAGGCTGTTTGTTCTTCTGACAGATCATCATATTCAATGTTTTAATGTTGAACTTTGTGATGAATTTGTTGTGTCAAAACTCTGGTCTCATGAGATTATTGGCTCAGATGGGGATCTGGGCATTAAGAAAGATTTGGCTGGGCAGAAGCAAATCTGGCCTCTCGATATGCAGGTGGACTATCATGGTAAAGTGACTACCATTCTGGTTGCTACCTTCTGCGTGGACCGGGGTAGTGGTTCAAGCTACACACAGTATTCTCTTTTGACTATGCAATATAAATCTGGAATGAGTGTGGAGCCTACCCATGAAAGAGTTTTAGAGAAAAAAGCACCTGTGCAAGTGATAATCCCAAAAGCAAGAGTAGAAAATGAAGACTTCTTATTCTCCATGAGACTGCGGGTAGGGGGAAAGCCTTCAGGATCAGCAATCATCCTTTCTGGTGATGGAACAGCAACAGTATCTCATTATTTTAGAAACTCTACAAGGCTCTATAAATTTGACCTACCTTATGATGCTGGAAAGGTTCTAGATGCTTCAATTCTTCCGTCTACAGATGATGGTGAAGAAGGGGCATGGGTTGTACTCACTGAGAAGGCAGGAATATGGGCAATACCTGAGAAGGCTGTTATACTTGGTGGGGTTGAACCTCCTGAACGAAGTTTGTCACGTAAAGGTAGCTCAAATGAAGGATCTGCACAAGAAGAGAGAAAAAACCTTACATTTGCAGGCAATTTTGCTCCTAGAAGGGCTAGTTCTGAAGCATGGGATGCTGGAGATAGACAAAGGGCTATGACTGTAAGTGCGCGTCAAACTGCCCAAGATGAAGAATCAGAAACTTTACTGAGCCAGCTTTTCCATGATTATCTTTTATCTGGGCAAGTTGGTGCCTCGTTTGAAAAGTTAAAAAATTCAGGGGCATTTGATAGGGACAGAGAGACAAATGTTTTTGCGCGAATGAGCAGATCAATTGTTGACACTTTAGCTAAACACTGGACAACAACTAGAGGAGCCGAGATTCTGGCAATGGCTGTAGTATCCTCCCAACTCATGGATAAGCAACAGAAACATACAAAATTTCTCCAGTTTCTTGCTTTATCCAAAAGTCATGAGGAGCTGTGTTCGAGACAGAGAAATTCTTTGCAAATTATCTTGGAGCATGGTGAAAAGCTTGCTGGAATGATTCAACTAAGGGAATTGCAGAACATTATTAGCCAAAACCGCTCTAGTGGACTTAACTCCTCCCATTCTAGTCCAGAAAATCAAATATCAGGTGCTCTCTGGGATCTCATTCAATTAGTTGGTGAGAGAGCCCGCCAGAATACTGTTCTTCTGATGGATAGGGATAATGCTGAAGTCTTTTACAGTAAAGTTTCTGATCTTGAACAAGTGTTCTCTTGCTTAGACAAACAGCTAGAGTATGTAATAAATGCAGAGCAGCCATTTGGGATTCAGGTCCAGAGAGCTTGTGAACTGTCAAATGCATGTGTTACTATAGTTCGTACAGCCATGCAATACAGAAGTGAGCATCACTTGTGGTATCCGCCACCTGAGCGCTTAACACCTTGGTATTGTCTAGCTGTGGTGCGCAATGGGATGTGGCACCTCGCTTCCTTCATGCTGCAGCTGTTAAAGGAGGCATCTCAACTTGATGTGTCTGCAAAATCAGATTTATATACTCATCTAGAAGTGCTGGCTGAAGTTCTGCTTGAGGCATATGCTGGTGCTGTCACAGCTAAAATTGAACTAGGAGATGAACACAAAGGCTTATTAGATGAGTATTGGAATAGGAGGGATGCACTCCTAGACTCGCTTTATCAACAAATCAAAGAGTTTGTGGAAGTTGGGCATCAGAATTTAAATGAAGGAACTGATGATCTAAATGAAGAAATTCTTGCGAAGCTTTCGTCATGTTTGCTGCCCATGGCAAAACGGCATGAATGCTACAGTACTTTATGGAAAATATGCTGTGACCTGAATGATTCTGGACTACTAAGAAATCTGATGCATGACAGCAGGGGACCTAATGGAGGGTTCAGTTACTTTGTGTTCAAACAACTTTATCTAAGGAGACAACTTTCCAAACTGCTTAGGCTTGGGGAAGAGTTTCCTGAAGAGTTATCCATATTTTTAAAGTATCATCAAGATCTTCTGTGGCTTCATGAAGTGTTCCTTCATCAATTTTCTTCAGCTTCGGAAACTCTTCATGAATTAGCTCTTTCTCAAAAAGAAAGCTCAATTTCAGAAGCTGAAGAGGGGACTGGTCCTGAGAATCTGACTATGTTACCGAAACTGGCAGACAGAAAGCGTTTTTTGAATCTCTCAAAAATAGCCGCAATAGCAGGTAAGGATGTTGATTCTGAGACCAAAGTGAAGCGCATTGAGGCTGATTTAAGGATTCTAAAGTTGCAGGAAGAAATAATAAACCTCCTTCCTGATGATGAAACAAAGCAAAGCCTTGACACAAAGCTACTTCATCCAGAAGATCTTATCAAGCTGTGCCTTGAAGGTGAAAAAGGTGCAGAGCTGTCACTGCGAGCTTTCGATGTATTTGCATGGACCAGCTCCTCCTTCCGTAAGACCCGTGCAAACCTTTTAGAGGAGTGCTGGAGAAATGCTGCTGATCAAGATGATTGGAGCAAACTCTATCAGGCATCGGTATCTGAAGGGTGGAGTGATGAGGAAACCTTGCAGAACTTGAAAGACACCGTGCTTTTCCAGGCATCAAATAGATGTTATGGACCAGAAGCTGAAACTTTTGGAGAAGGGTTCGACAAAGTGTTGTCACTGAGACAAGAAATCGCGGAGCCTCCAATCATAAAGGATTCAGTTTCTTCTGTGGAAGCAGTACTCATGCAGCATAAGGATTATTCAGAGGCAGGGAAGCTGATGCTGACCGCGATCATGTTGGGTAGTTTACAGGACGATAACATAGAACAAGAAGGTCCTGTGCCAATGGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000972 GO:0003674 GO:0005198 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005643 GO:0005737 GO:0006325 GO:0006355 GO:0006403 GO:0006405 GO:0006606 GO:0006810 GO:0006886 GO:0006913 GO:0006996 GO:0006997 GO:0008104 GO:0008150 GO:0009507 GO:0009536 GO:0009889 GO:0009987 GO:0010468 GO:0010556 GO:0012505 GO:0015031 GO:0015833 GO:0015931 GO:0016043 GO:0017038 GO:0017056 GO:0019219 GO:0019222 GO:0031080 GO:0031081 GO:0031323 GO:0031326 GO:0031503 GO:0031967 GO:0031975 GO:0032991 GO:0033036 GO:0033365 GO:0034504 GO:0034613 GO:0034629 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0045184 GO:0046907 GO:0050657 GO:0050658 GO:0050789 GO:0050794 GO:0051168 GO:0051169 GO:0051170 GO:0051171 GO:0051179 GO:0051234 GO:0051236 GO:0051252 GO:0051276 GO:0051641 GO:0051649 GO:0051664 GO:0051668 GO:0060255 GO:0065007 GO:0070727 GO:0071702 GO:0071705 GO:0071840 GO:0072594 GO:0080090 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko03013 map03013

Pfam Domains

Protein Families

Nucleoporin_C Nucleoporin_N

Protein Analysis

1316

Amino Acids

146.99

Weight (kDa)

5.65

Isoelectric Point (pI)

46.3

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009212)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G05120 AT2G05120
fragaria_vesca	FvH4_6g40930 FvH4_6g40930 FvH4_6g40930 FvH4_6g40930 FvH4_6g40930
malus_domestica	MD17G1113600.v1.1
prunus_persica	Prupe.3G200800_v2.0.a1
pyrus_communis	pycom17g10520
rosa_chinensis	RchiOBHm_Chr2g0156551
rosa_laevigata	RLG00000020920
rosa_multiflora	Rmu_sc0002717.1_g000003
rosa_roxburghii	Rroxscaffold_2G00092950
rosa_rugosa	Rorug02G0454100 Rorug02G0454200 Rorug02G0454300
rosa_samantha	Rh2AG520000 Rh2BG532500 Rh2CG505000 Rh2DG541400
rosa_wichuraiana	Rw2G042870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1147
Acc16I	TGCGCA	1 cut(s)	2573
Acc36I	ACCTGC	2 cut(s)	1147, 3317
AccB1I	GGYRCC	2 cut(s)	1871, 2586
AccB7I	CCANNNNNTGG	1 cut(s)	2035
AccBSI	CCGCTC	1 cut(s)	2208
AccI	GTMKAC	2 cut(s)	500, 1535
AccII	CGCG	4 cut(s)	1792, 1939, 3788, 3884
AclWI	GGATC	6 cut(s)	18, 61, 1107, 1414, 1684, 2277
AcoI	YGGCCR	1 cut(s)	60
AcsI	RAATTY	8 cut(s)	655, 1049, 1481, 1894, 2060, 2119, 2839, 2874
AcuI	CTGAAG	9 cut(s)	621, 1386, 1764, 2358, 2703, 3117, 3156, 3255, 3669
AfaI	GTAC	7 cut(s)	124, 581, 739, 1569, 2488, 2935, 3834
AfeI	AGCGCT	1 cut(s)	2540
AfiI	CCNNNNNNNGG	6 cut(s)	43, 125, 897, 2035, 3014, 3583
AjiI	CACGTC	1 cut(s)	498
AjnI	CCWGG	5 cut(s)	10, 49, 140, 950, 3702
AloI	GAACNNNNNNTCC	2 cut(s)	121, 153
Alw21I	GWGCWC	1 cut(s)	2263
Alw26I	GTCTC	8 cut(s)	381, 1077, 1372, 1916, 2104, 3049, 3341, 3769
AlwI	GGATC	6 cut(s)	18, 61, 1107, 1414, 1684, 2277
AlwNI	CAGNNNCTG	3 cut(s)	770, 3233, 3734
Ama87I	CYCGRG	1 cut(s)	567
Aor51HI	AGCGCT	1 cut(s)	2540
AoxI	GGCC	5 cut(s)	60, 116, 258, 584, 1142
ApeKI	GCWGC	9 cut(s)	383, 572, 837, 2422, 2605, 2608, 2902, 3602, 3841
ApoI	RAATTY	8 cut(s)	655, 1049, 1481, 1894, 2060, 2119, 2839, 2874
ArsI	GACNNNNNNTTYG	4 cut(s)	1055, 1087, 2876, 2908
Asp700I	GAANNNNTTC	4 cut(s)	1399, 2874, 3090, 3186
AspA2I	CCTAGG	1 cut(s)	919
AspLEI	GCGC	6 cut(s)	796, 1792, 1939, 2541, 2574, 3363
AsuC2I	CCSGG	2 cut(s)	104, 1214
AsuHPI	GGTGA	7 cut(s)	299, 914, 1439, 1559, 2159, 2300, 3506
AvaI	CYCGRG	1 cut(s)	567
AvrII	CCTAGG	1 cut(s)	919
BaeI	ACNNNNGTAYC	4 cut(s)	282, 282, 315, 315
BanI	GGYRCC	2 cut(s)	1871, 2586
BanII	GRGCYC	2 cut(s)	148, 2299
BbsI	GAAGAC	3 cut(s)	683, 959, 1365
Bbv12I	GWGCWC	1 cut(s)	2263
BbvI	GCAGC	9 cut(s)	395, 559, 849, 2434, 2592, 2620, 2889, 3589, 3853
BccI	CCATC	6 cut(s)	806, 850, 1088, 1424, 1538, 2314
BceAI	ACGGC	2 cut(s)	840, 2933
BcgI	CGANNNNNNTGC	4 cut(s)	642, 676, 3518, 3552
BciT130I	CCWGG	5 cut(s)	12, 51, 142, 952, 3704
BciVI	GTATCC	2 cut(s)	2032, 2535
BclI	TGATCA	1 cut(s)	3607
BcnI	CCSGG	2 cut(s)	104, 1214
BcoDI	GTCTC	8 cut(s)	381, 1077, 1372, 1916, 2104, 3049, 3341, 3769
BfmI	CTRYAG	9 cut(s)	381, 529, 762, 802, 1536, 2016, 2478, 2606, 2929
BfoI	RGCGCY	1 cut(s)	2542
BfuAI	ACCTGC	2 cut(s)	1147, 3317
BfuI	GTATCC	2 cut(s)	2032, 2535
BglII	AGATCT	2 cut(s)	3130, 3469
BlnI	CCTAGG	1 cut(s)	919
BmcAI	AGTACT	2 cut(s)	2935, 3834
Bme1390I	CCNGG	7 cut(s)	12, 51, 104, 142, 952, 1214, 3704
BmeT110I	CYCGRG	1 cut(s)	567
BmgBI	CACGTC	1 cut(s)	498
BmrFI	CCNGG	7 cut(s)	12, 51, 104, 142, 952, 1214, 3704
BmrI	ACTGGG	2 cut(s)	114, 738
BmuI	ACTGGG	2 cut(s)	114, 738
BoxI	GACNNNNGTC	1 cut(s)	909
BpiI	GAAGAC	3 cut(s)	683, 959, 1365
BpmI	CTGGAG	3 cut(s)	1779, 2051, 3613
Bpu10I	CCTNAGC	2 cut(s)	2535, 3074
BpuEI	CTTGAG	1 cut(s)	2714
BpuMI	CCSGG	2 cut(s)	104, 1214
Bsa29I	ATCGAT	1 cut(s)	389
BsaAI	YACGTR	1 cut(s)	1655
BsaBI	GATNNNNATC	1 cut(s)	1098
BsaI	GGTCTC	2 cut(s)	1077, 3341
BsaJI	CCNNGG	9 cut(s)	49, 140, 141, 895, 919, 938, 1213, 2549, 2907
BsaWI	WCCGGW	1 cut(s)	125
BsaXI	ACNNNNNCTCC	6 cut(s)	115, 121, 145, 151, 916, 946
Bsc4I	CCNNNNNNNGG	6 cut(s)	43, 125, 897, 2035, 3014, 3583
Bse118I	RCCGGY	2 cut(s)	81, 114
Bse1I	ACTGG	8 cut(s)	120, 261, 587, 733, 1982, 2068, 3250, 3282
Bse3DI	GCAATG	3 cut(s)	832, 2016, 2581
Bse8I	GATNNNNATC	1 cut(s)	1098
BseBI	CCWGG	5 cut(s)	12, 51, 142, 952, 3704
BseCI	ATCGAT	1 cut(s)	389
BseDI	CCNNGG	9 cut(s)	49, 140, 141, 895, 919, 938, 1213, 2549, 2907
BseGI	GGATG	8 cut(s)	208, 445, 1416, 1759, 2586, 2785, 3340, 3460
BseJI	GATNNNNATC	1 cut(s)	1098
BseLI	CCNNNNNNNGG	6 cut(s)	43, 125, 897, 2035, 3014, 3583
BseMI	GCAATG	3 cut(s)	832, 2016, 2581
BseMII	CTCAG	8 cut(s)	1104, 1566, 1593, 1820, 2526, 3243, 3336, 3764
BseNI	ACTGG	8 cut(s)	120, 261, 587, 733, 1982, 2068, 3250, 3282
BseRI	GAGGAG	7 cut(s)	57, 138, 2007, 2111, 2215, 3541, 3599
BseXI	GCAGC	9 cut(s)	395, 559, 849, 2434, 2592, 2620, 2889, 3589, 3853
BseYI	CCCAGC	1 cut(s)	1124
BsgI	GTGCAG	2 cut(s)	1665, 3525
Bsh1236I	CGCG	4 cut(s)	1792, 1939, 3788, 3884
BshFI	GGCC	5 cut(s)	62, 118, 260, 586, 1144
BshNI	GGYRCC	2 cut(s)	1871, 2586
BshVI	ATCGAT	1 cut(s)	389
BsiHKAI	GWGCWC	1 cut(s)	2263
BsiHKCI	CYCGRG	1 cut(s)	567
BsiSI	CCGG	7 cut(s)	59, 82, 104, 115, 126, 134, 1213
BslFI	GGGAC	7 cut(s)	59, 92, 752, 887, 1928, 3018, 3256
BslI	CCNNNNNNNGG	6 cut(s)	43, 125, 897, 2035, 3014, 3583
BsmAI	GTCTC	8 cut(s)	381, 1077, 1372, 1916, 2104, 3049, 3341, 3769
BsmFI	GGGAC	7 cut(s)	59, 92, 752, 887, 1928, 3018, 3256
BsmI	GAATGC	1 cut(s)	2930
BsnI	GGCC	5 cut(s)	62, 118, 260, 586, 1144
Bso31I	GGTCTC	2 cut(s)	1077, 3341
BsoBI	CYCGRG	1 cut(s)	567
Bsp1286I	GDGCHC	3 cut(s)	148, 2263, 2299
Bsp1407I	TGTACA	1 cut(s)	737
Bsp19I	CCATGG	1 cut(s)	2907
BspANI	GGCC	5 cut(s)	62, 118, 260, 586, 1144
BspCNI	CTCAG	8 cut(s)	1103, 1567, 1594, 1821, 2527, 3244, 3337, 3765
BspDI	ATCGAT	1 cut(s)	389
BspFNI	CGCG	4 cut(s)	1792, 1939, 3788, 3884
BspHI	TCATGA	4 cut(s)	1075, 2092, 3145, 3190
BspMAI	CTGCAG	3 cut(s)	385, 766, 2610
BspMI	ACCTGC	2 cut(s)	1147, 3317
BspPI	GGATC	6 cut(s)	18, 61, 1107, 1414, 1684, 2277
BspT107I	GGYRCC	2 cut(s)	1871, 2586
BspTNI	GGTCTC	2 cut(s)	1077, 3341
BsrBI	CCGCTC	1 cut(s)	2208
BsrDI	GCAATG	3 cut(s)	832, 2016, 2581
BsrFI	RCCGGY	2 cut(s)	81, 114
BsrGI	TGTACA	1 cut(s)	737
BsrI	ACTGG	8 cut(s)	120, 261, 587, 733, 1982, 2068, 3250, 3282
BssAI	RCCGGY	2 cut(s)	81, 114
BssECI	CCNNGG	9 cut(s)	49, 140, 141, 895, 919, 938, 1213, 2549, 2907
BssT1I	CCWWGG	5 cut(s)	895, 919, 938, 2549, 2907
Bst2UI	CCWGG	5 cut(s)	12, 51, 142, 952, 3704
Bst6I	CTCTTC	6 cut(s)	362, 1683, 3081, 3093, 3192, 3231
BstAPI	GCANNNNNTGC	1 cut(s)	1754
BstAUI	TGTACA	1 cut(s)	737
BstBAI	YACGTR	1 cut(s)	1655
BstC8I	GCNNGC	8 cut(s)	798, 818, 1714, 1835, 2157, 2299, 2679, 3522
BstDSI	CCRYGG	1 cut(s)	2907
BstENI	CCTNNNNNAGG	2 cut(s)	3012, 3581
BstF5I	GGATG	8 cut(s)	208, 445, 1416, 1759, 2586, 2785, 3340, 3460
BstFNI	CGCG	4 cut(s)	1792, 1939, 3788, 3884
BstH2I	RGCGCY	1 cut(s)	2542
BstHHI	GCGC	6 cut(s)	796, 1792, 1939, 2541, 2574, 3363
BstMAI	GTCTC	8 cut(s)	381, 1077, 1372, 1916, 2104, 3049, 3341, 3769
BstMWI	GCNNNNNNNGC	8 cut(s)	143, 1141, 1754, 2205, 2536, 2717, 3323, 3517
BstNI	CCWGG	5 cut(s)	12, 51, 142, 952, 3704
BstNSI	RCATGY	2 cut(s)	281, 2472
BstPAI	GACNNNNGTC	1 cut(s)	909
BstSCI	CCNGG	7 cut(s)	10, 49, 102, 140, 950, 1212, 3702
BstSFI	CTRYAG	9 cut(s)	381, 529, 762, 802, 1536, 2016, 2478, 2606, 2929
BstUI	CGCG	4 cut(s)	1792, 1939, 3788, 3884
BstV1I	GCAGC	9 cut(s)	395, 559, 849, 2434, 2592, 2620, 2889, 3589, 3853
BstV2I	GAAGAC	3 cut(s)	683, 959, 1365
BstX2I	RGATCY	6 cut(s)	53, 1099, 1676, 2269, 3130, 3469
BstYI	RGATCY	6 cut(s)	53, 1099, 1676, 2269, 3130, 3469
Bsu15I	ATCGAT	1 cut(s)	389
BsuI	GTATCC	2 cut(s)	2032, 2535
BsuRI	GGCC	5 cut(s)	62, 118, 260, 586, 1144
BsuTUI	ATCGAT	1 cut(s)	389
BtgI	CCRYGG	1 cut(s)	2907
BtrI	CACGTC	1 cut(s)	498
BtsCI	GGATG	8 cut(s)	208, 445, 1416, 1759, 2586, 2785, 3340, 3460
BtsI	GCAGTG	1 cut(s)	3515
BtsIMutI	CAGTG	6 cut(s)	526, 944, 1572, 1975, 3515, 3770
BveI	ACCTGC	2 cut(s)	1147, 3317
Cac8I	GCNNGC	8 cut(s)	798, 818, 1714, 1835, 2157, 2299, 2679, 3522
CaiI	CAGNNNCTG	3 cut(s)	770, 3233, 3734
CciI	TCATGA	4 cut(s)	1075, 2092, 3145, 3190
CfoI	GCGC	6 cut(s)	796, 1792, 1939, 2541, 2574, 3363
Cfr10I	RCCGGY	2 cut(s)	81, 114
ClaI	ATCGAT	1 cut(s)	389
CseI	GACGC	1 cut(s)	1781
CsiI	ACCWGGT	1 cut(s)	950
Csp6I	GTAC	7 cut(s)	123, 580, 738, 1568, 2487, 2934, 3833
CviQI	GTAC	7 cut(s)	123, 580, 738, 1568, 2487, 2934, 3833
DraI	TTTAAA	2 cut(s)	2844, 3117
EaeI	YGGCCR	1 cut(s)	60
Eam1104I	CTCTTC	6 cut(s)	362, 1683, 3081, 3093, 3192, 3231
EarI	CTCTTC	6 cut(s)	362, 1683, 3081, 3093, 3192, 3231
EciI	GGCGGA	1 cut(s)	2517
Eco130I	CCWWGG	5 cut(s)	895, 919, 938, 2549, 2907
Eco24I	GRGCYC	2 cut(s)	148, 2299
Eco31I	GGTCTC	2 cut(s)	1077, 3341
Eco47III	AGCGCT	1 cut(s)	2540
Eco57I	CTGAAG	9 cut(s)	621, 1386, 1764, 2358, 2703, 3117, 3156, 3255, 3669
Eco88I	CYCGRG	1 cut(s)	567
EcoNI	CCTNNNNNAGG	2 cut(s)	3012, 3581
EcoO109I	RGGNCCY	3 cut(s)	46, 3005, 3929
EcoRII	CCWGG	5 cut(s)	10, 49, 140, 950, 3702
EcoT14I	CCWWGG	5 cut(s)	895, 919, 938, 2549, 2907
EcoT22I	ATGCAT	2 cut(s)	2470, 2994
EcoT38I	GRGCYC	2 cut(s)	148, 2299
ErhI	CCWWGG	5 cut(s)	895, 919, 938, 2549, 2907
FalI	AAGNNNNNCTT	6 cut(s)	2676, 2708, 2862, 2894, 3141, 3173
FaqI	GGGAC	7 cut(s)	59, 92, 752, 887, 1928, 3018, 3256
FauI	CCCGC	2 cut(s)	1377, 2306
FauNDI	CATATG	2 cut(s)	295, 2701
FbaI	TGATCA	1 cut(s)	3607
FblI	GTMKAC	2 cut(s)	500, 1535
FokI	GGATG	8 cut(s)	215, 452, 1403, 1766, 2593, 2792, 3347, 3447
FriOI	GRGCYC	2 cut(s)	148, 2299
FspI	TGCGCA	1 cut(s)	2573
GlaI	GCGC	6 cut(s)	795, 1791, 1938, 2540, 2573, 3362
GsaI	CCCAGC	1 cut(s)	1128
GsuI	CTGGAG	3 cut(s)	1779, 2051, 3613
HaeII	RGCGCY	1 cut(s)	2542
HaeIII	GGCC	5 cut(s)	62, 118, 260, 586, 1144
HapII	CCGG	7 cut(s)	59, 82, 104, 115, 126, 134, 1213
HgaI	GACGC	1 cut(s)	1781
HhaI	GCGC	6 cut(s)	796, 1792, 1939, 2541, 2574, 3363
Hin6I	GCGC	6 cut(s)	794, 1790, 1937, 2539, 2572, 3361
HinP1I	GCGC	6 cut(s)	794, 1790, 1937, 2539, 2572, 3361
HincII	GTYRAC	1 cut(s)	1960
HindII	GTYRAC	1 cut(s)	1960
HindIII	AAGCTT	2 cut(s)	2153, 2885
HpaII	CCGG	7 cut(s)	59, 82, 104, 115, 126, 134, 1213
HphI	GGTGA	7 cut(s)	299, 914, 1439, 1559, 2159, 2300, 3506
Hpy99I	CGWCG	2 cut(s)	45, 77
HpyCH4IV	ACGT	2 cut(s)	497, 1654
HpyF10VI	GCNNNNNNNGC	8 cut(s)	143, 1141, 1754, 2205, 2536, 2717, 3323, 3517
HpySE526I	ACGT	2 cut(s)	497, 1654
HspAI	GCGC	6 cut(s)	794, 1790, 1937, 2539, 2572, 3361
KflI	GGGWCCC	1 cut(s)	46
Ksp22I	TGATCA	1 cut(s)	3607
Lsp1109I	GCAGC	9 cut(s)	395, 559, 849, 2434, 2592, 2620, 2889, 3589, 3853
MabI	ACCWGGT	1 cut(s)	950
MaeII	ACGT	2 cut(s)	497, 1654
MbiI	CCGCTC	1 cut(s)	2208
MfeI	CAATTG	3 cut(s)	394, 484, 1953
MflI	RGATCY	6 cut(s)	53, 1099, 1676, 2269, 3130, 3469
MhlI	GDGCHC	3 cut(s)	148, 2263, 2299
MlyI	GAGTC	3 cut(s)	348, 877, 2786
MmeI	TCCRAC	1 cut(s)	205
Mph1103I	ATGCAT	2 cut(s)	2470, 2994
MroXI	GAANNNNTTC	4 cut(s)	1399, 2874, 3090, 3186
MslI	CAYNNNNRTG	1 cut(s)	282
MspA1I	CMGCKG	1 cut(s)	2611
MspI	CCGG	7 cut(s)	59, 82, 104, 115, 126, 134, 1213
MspR9I	CCNGG	7 cut(s)	12, 51, 104, 142, 952, 1214, 3704
MunI	CAATTG	3 cut(s)	394, 484, 1953
Mva1269I	GAATGC	1 cut(s)	2930
MvaI	CCWGG	5 cut(s)	12, 51, 142, 952, 3704
MvnI	CGCG	4 cut(s)	1792, 1939, 3788, 3884
MwoI	GCNNNNNNNGC	8 cut(s)	143, 1141, 1754, 2205, 2536, 2717, 3323, 3517
NciI	CCSGG	2 cut(s)	104, 1214
NcoI	CCATGG	1 cut(s)	2907
NdeI	CATATG	2 cut(s)	295, 2701
NmeAIII	GCCGAG	1 cut(s)	2023
NmuCI	GTSAC	8 cut(s)	902, 942, 1177, 1650, 2713, 2954, 3513, 3768
NsbI	TGCGCA	1 cut(s)	2573
NsiI	ATGCAT	2 cut(s)	2470, 2994
NspI	RCATGY	2 cut(s)	281, 2472
PaeR7I	CTCGAG	1 cut(s)	567
PagI	TCATGA	4 cut(s)	1075, 2092, 3145, 3190
PaqCI	CACCTGC	1 cut(s)	1147
PasI	CCCWGGG	1 cut(s)	141
PctI	GAATGC	1 cut(s)	2930
PdmI	GAANNNNTTC	4 cut(s)	1399, 2874, 3090, 3186
PflMI	CCANNNNNTGG	1 cut(s)	2035
PleI	GAGTC	3 cut(s)	348, 877, 2786
PpsI	GAGTC	3 cut(s)	348, 877, 2786
Ppu21I	YACGTR	1 cut(s)	1655
PpuMI	RGGWCCY	3 cut(s)	46, 3005, 3929
PshAI	GACNNNNGTC	1 cut(s)	909
Psp5II	RGGWCCY	3 cut(s)	46, 3005, 3929
Psp6I	CCWGG	5 cut(s)	10, 49, 140, 950, 3702
PspFI	CCCAGC	1 cut(s)	1124
PspGI	CCWGG	5 cut(s)	10, 49, 140, 950, 3702
PspPPI	RGGWCCY	3 cut(s)	46, 3005, 3929
PspXI	VCTCGAGB	1 cut(s)	567
PstI	CTGCAG	3 cut(s)	385, 766, 2610
PstNI	CAGNNNCTG	3 cut(s)	770, 3233, 3734
PsuI	RGATCY	6 cut(s)	53, 1099, 1676, 2269, 3130, 3469
PvuII	CAGCTG	1 cut(s)	2611
RsaI	GTAC	7 cut(s)	124, 581, 739, 1569, 2488, 2935, 3834
RsaNI	GTAC	7 cut(s)	123, 580, 738, 1568, 2487, 2934, 3833
RseI	CAYNNNNRTG	1 cut(s)	282
ScaI	AGTACT	2 cut(s)	2935, 3834
SchI	GAGTC	3 cut(s)	348, 877, 2786
ScrFI	CCNGG	7 cut(s)	12, 51, 104, 142, 952, 1214, 3704
SduI	GDGCHC	3 cut(s)	148, 2263, 2299
SexAI	ACCWGGT	1 cut(s)	950
SfcI	CTRYAG	9 cut(s)	381, 529, 762, 802, 1536, 2016, 2478, 2606, 2929
Sfr274I	CTCGAG	1 cut(s)	567
SlaI	CTCGAG	1 cut(s)	567
SmiI	ATTTAAAT	1 cut(s)	2844
SmiMI	CAYNNNNRTG	1 cut(s)	282
SmlI	CTYRAG	2 cut(s)	567, 2693
SmoI	CTYRAG	2 cut(s)	567, 2693
StyD4I	CCNGG	7 cut(s)	10, 49, 102, 140, 950, 1212, 3702
StyI	CCWWGG	5 cut(s)	895, 919, 938, 2549, 2907
SwaI	ATTTAAAT	1 cut(s)	2844
TaiI	ACGT	2 cut(s)	500, 1657
TaqI	TCGA	7 cut(s)	75, 389, 568, 1149, 2108, 3528, 3756
TatI	WGTACW	5 cut(s)	579, 737, 1567, 2933, 3832
TauI	GCSGC	2 cut(s)	712, 3320
TscAI	CASTG	6 cut(s)	533, 951, 1579, 1982, 3522, 3777
TseFI	GTSAC	8 cut(s)	902, 942, 1177, 1650, 2713, 2954, 3513, 3768
TseI	GCWGC	9 cut(s)	383, 572, 837, 2422, 2605, 2608, 2902, 3602, 3841
Tsp45I	GTSAC	8 cut(s)	902, 942, 1177, 1650, 2713, 2954, 3513, 3768
TspGWI	ACGGA	2 cut(s)	1521, 3548
TspRI	CASTG	6 cut(s)	533, 951, 1579, 1982, 3522, 3777
Van91I	CCANNNNNTGG	1 cut(s)	2035
XagI	CCTNNNNNAGG	2 cut(s)	3012, 3581
XapI	RAATTY	8 cut(s)	655, 1049, 1481, 1894, 2060, 2119, 2839, 2874
XbaI	TCTAGA	2 cut(s)	1513, 2668
XceI	RCATGY	2 cut(s)	281, 2472
XhoI	CTCGAG	1 cut(s)	567
XmaJI	CCTAGG	1 cut(s)	919
XmiI	GTMKAC	2 cut(s)	500, 1535
XmnI	GAANNNNTTC	4 cut(s)	1399, 2874, 3090, 3186
ZrmI	AGTACT	2 cut(s)	2935, 3834
Zsp2I	ATGCAT	2 cut(s)	2470, 2994

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.