Proteinaceous RNase P
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G16650 AT2G16650 AT4G21900 AT5G60430 AT5G60430 AT5G60430 AT5G60430 |
| fragaria_vesca | FvH4_3g24550 FvH4_3g24550 FvH4_3g24550 |
| malus_domestica | MD03G1141100.v1.1 MD11G1171700.v1.1 |
| prunus_persica | Prupe.6G126500_v2.0.a1 |
| pyrus_communis | pycom03g09600 |
| rosa_chinensis | RchiOBHm_Chr5g0043991 |
| rosa_laevigata | RLG00000034233 RLG00000034235 |
| rosa_multiflora | Rmu_sc0001157.1_g000006 |
| rosa_roxburghii | Rroxscaffold_1G00037010 |
| rosa_rugosa | Rorug05G0209600 Rorug05G0209700 Rorug05G0209700 Rorug05G0209800 Rorug05G0209900 Rorug05G0210000 Rorug05G0210100.1 Rorug05G0210200 |
| rosa_samantha | Rh5AG294100 Rh5BG302500 Rh5CG329700 Rh5DG311300 |
| rosa_wichuraiana | Rw5G027270 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 515 |
| AccI | GTMKAC | 1 cut(s) | 1397 |
| AcsI | RAATTY | 2 cut(s) | 949, 1057 |
| AcuI | CTGAAG | 3 cut(s) | 324, 958, 1439 |
| AfaI | GTAC | 3 cut(s) | 186, 221, 1357 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 1204 |
| AgeI | ACCGGT | 1 cut(s) | 21 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1388 |
| AjnI | CCWGG | 1 cut(s) | 1249 |
| Alw21I | GWGCWC | 2 cut(s) | 47, 513 |
| Alw26I | GTCTC | 7 cut(s) | 30, 194, 953, 1156, 1323, 1440, 1495 |
| AoxI | GGCC | 1 cut(s) | 1139 |
| ApoI | RAATTY | 2 cut(s) | 949, 1057 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 263, 295, 1322, 1354 |
| AsiGI | ACCGGT | 1 cut(s) | 21 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 718 |
| AspLEI | GCGC | 1 cut(s) | 451 |
| AspS9I | GGNCC | 3 cut(s) | 133, 1140, 1390 |
| AsuC2I | CCSGG | 1 cut(s) | 1487 |
| AsuHPI | GGTGA | 5 cut(s) | 386, 707, 716, 1187, 1551 |
| AvaII | GGWCC | 2 cut(s) | 133, 1390 |
| BanII | GRGCYC | 2 cut(s) | 47, 1047 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1097, 1129 |
| BbsI | GAAGAC | 3 cut(s) | 944, 964, 1506 |
| Bbv12I | GWGCWC | 2 cut(s) | 47, 513 |
| BccI | CCATC | 3 cut(s) | 176, 1022, 1061 |
| BceAI | ACGGC | 2 cut(s) | 15, 1417 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 534, 568 |
| BciT130I | CCWGG | 1 cut(s) | 1251 |
| BclI | TGATCA | 1 cut(s) | 13 |
| BcnI | CCSGG | 1 cut(s) | 1487 |
| BcoDI | GTCTC | 7 cut(s) | 30, 194, 953, 1156, 1323, 1440, 1495 |
| BfaI | CTAG | 1 cut(s) | 348 |
| BfmI | CTRYAG | 3 cut(s) | 522, 850, 1020 |
| BfuAI | ACCTGC | 1 cut(s) | 515 |
| BlpI | GCTNAGC | 2 cut(s) | 229, 1290 |
| BmcAI | AGTACT | 1 cut(s) | 1357 |
| Bme1390I | CCNGG | 2 cut(s) | 1251, 1487 |
| Bme18I | GGWCC | 2 cut(s) | 133, 1390 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1388 |
| BmgT120I | GGNCC | 3 cut(s) | 133, 1140, 1390 |
| BmiI | GGNNCC | 2 cut(s) | 1142, 1255 |
| BmrFI | CCNGG | 2 cut(s) | 1251, 1487 |
| BmsI | GCATC | 3 cut(s) | 151, 338, 723 |
| BpiI | GAAGAC | 3 cut(s) | 944, 964, 1506 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 229, 1290 |
| BpuEI | CTTGAG | 2 cut(s) | 1016, 1280 |
| BpuMI | CCSGG | 1 cut(s) | 1487 |
| BsaI | GGTCTC | 3 cut(s) | 30, 1323, 1495 |
| BsaJI | CCNNGG | 3 cut(s) | 129, 274, 579 |
| BsaWI | WCCGGW | 3 cut(s) | 21, 1197, 1392 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 1204 |
| Bse118I | RCCGGY | 2 cut(s) | 21, 451 |
| Bse1I | ACTGG | 3 cut(s) | 177, 357, 995 |
| BseBI | CCWGG | 1 cut(s) | 1251 |
| BseDI | CCNNGG | 3 cut(s) | 129, 274, 579 |
| BseGI | GGATG | 2 cut(s) | 738, 1533 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 1204 |
| BseMII | CTCAG | 4 cut(s) | 153, 205, 243, 428 |
| BseNI | ACTGG | 3 cut(s) | 177, 357, 995 |
| BseRI | GAGGAG | 2 cut(s) | 89, 554 |
| BshFI | GGCC | 1 cut(s) | 1141 |
| BshTI | ACCGGT | 1 cut(s) | 21 |
| BsiHKAI | GWGCWC | 2 cut(s) | 47, 513 |
| BsiSI | CCGG | 5 cut(s) | 22, 452, 1198, 1393, 1487 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 1204 |
| BsmAI | GTCTC | 7 cut(s) | 30, 194, 953, 1156, 1323, 1440, 1495 |
| BsmBI | CGTCTC | 3 cut(s) | 194, 1156, 1440 |
| BsnI | GGCC | 1 cut(s) | 1141 |
| Bso31I | GGTCTC | 3 cut(s) | 30, 1323, 1495 |
| Bsp1286I | GDGCHC | 3 cut(s) | 47, 513, 1047 |
| Bsp143I | GATC | 2 cut(s) | 13, 292 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 229, 1290 |
| BspANI | GGCC | 1 cut(s) | 1141 |
| BspCNI | CTCAG | 4 cut(s) | 152, 204, 242, 429 |
| BspLI | GGNNCC | 2 cut(s) | 1142, 1255 |
| BspMAI | CTGCAG | 2 cut(s) | 526, 854 |
| BspMI | ACCTGC | 1 cut(s) | 515 |
| BspQI | GCTCTTC | 2 cut(s) | 52, 501 |
| BspTNI | GGTCTC | 3 cut(s) | 30, 1323, 1495 |
| BsrFI | RCCGGY | 2 cut(s) | 21, 451 |
| BsrI | ACTGG | 3 cut(s) | 177, 357, 995 |
| BssAI | RCCGGY | 2 cut(s) | 21, 451 |
| BssECI | CCNNGG | 3 cut(s) | 129, 274, 579 |
| BssMI | GATC | 2 cut(s) | 13, 292 |
| BssNAI | GTATAC | 1 cut(s) | 1398 |
| BssT1I | CCWWGG | 1 cut(s) | 129 |
| Bst1107I | GTATAC | 1 cut(s) | 1398 |
| Bst2UI | CCWGG | 1 cut(s) | 1251 |
| Bst4CI | ACNGT | 4 cut(s) | 275, 808, 1118, 1229 |
| Bst6I | CTCTTC | 5 cut(s) | 52, 107, 258, 501, 1503 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 530 |
| BstC8I | GCNNGC | 2 cut(s) | 197, 453 |
| BstDEI | CTNAG | 9 cut(s) | 139, 191, 229, 437, 737, 1290, 1348, 1563, 1584 |
| BstDSI | CCRYGG | 2 cut(s) | 274, 579 |
| BstEII | GGTNACC | 1 cut(s) | 1412 |
| BstF5I | GGATG | 2 cut(s) | 738, 1533 |
| BstHHI | GCGC | 1 cut(s) | 451 |
| BstKTI | GATC | 2 cut(s) | 16, 295 |
| BstMAI | GTCTC | 7 cut(s) | 30, 194, 953, 1156, 1323, 1440, 1495 |
| BstMBI | GATC | 2 cut(s) | 13, 292 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 149, 353, 457, 530, 1429 |
| BstNI | CCWGG | 1 cut(s) | 1251 |
| BstPI | GGTNACC | 1 cut(s) | 1412 |
| BstSCI | CCNGG | 2 cut(s) | 1249, 1485 |
| BstSFI | CTRYAG | 3 cut(s) | 522, 850, 1020 |
| BstV2I | GAAGAC | 3 cut(s) | 944, 964, 1506 |
| BstZ17I | GTATAC | 1 cut(s) | 1398 |
| BsuRI | GGCC | 1 cut(s) | 1141 |
| BtgI | CCRYGG | 2 cut(s) | 274, 579 |
| BtsCI | GGATG | 2 cut(s) | 738, 1533 |
| BtsI | GCAGTG | 1 cut(s) | 859 |
| BtsIMutI | CAGTG | 3 cut(s) | 184, 348, 859 |
| BveI | ACCTGC | 1 cut(s) | 515 |
| Cac8I | GCNNGC | 2 cut(s) | 197, 453 |
| CfoI | GCGC | 1 cut(s) | 451 |
| Cfr10I | RCCGGY | 2 cut(s) | 21, 451 |
| Cfr13I | GGNCC | 3 cut(s) | 133, 1140, 1390 |
| CseI | GACGC | 1 cut(s) | 1183 |
| CsiI | ACCWGGT | 1 cut(s) | 1249 |
| Csp6I | GTAC | 3 cut(s) | 185, 220, 1356 |
| CspAI | ACCGGT | 1 cut(s) | 21 |
| CviAII | CATG | 7 cut(s) | 117, 514, 779, 954, 1004, 1476, 1494 |
| CviQI | GTAC | 3 cut(s) | 185, 220, 1356 |
| DdeI | CTNAG | 9 cut(s) | 139, 191, 229, 437, 737, 1290, 1348, 1563, 1584 |
| DpnI | GATC | 2 cut(s) | 15, 294 |
| DpnII | GATC | 2 cut(s) | 13, 292 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1388 |
| Eam1104I | CTCTTC | 5 cut(s) | 52, 107, 258, 501, 1503 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1388 |
| EarI | CTCTTC | 5 cut(s) | 52, 107, 258, 501, 1503 |
| Ecl136II | GAGCTC | 1 cut(s) | 45 |
| Eco130I | CCWWGG | 1 cut(s) | 129 |
| Eco24I | GRGCYC | 2 cut(s) | 47, 1047 |
| Eco31I | GGTCTC | 3 cut(s) | 30, 1323, 1495 |
| Eco32I | GATATC | 1 cut(s) | 552 |
| Eco47I | GGWCC | 2 cut(s) | 133, 1390 |
| Eco53kI | GAGCTC | 1 cut(s) | 45 |
| Eco57I | CTGAAG | 3 cut(s) | 324, 958, 1439 |
| Eco91I | GGTNACC | 1 cut(s) | 1412 |
| EcoICRI | GAGCTC | 1 cut(s) | 45 |
| EcoO109I | RGGNCCY | 1 cut(s) | 133 |
| EcoO65I | GGTNACC | 1 cut(s) | 1412 |
| EcoRI | GAATTC | 1 cut(s) | 949 |
| EcoRII | CCWGG | 1 cut(s) | 1249 |
| EcoRV | GATATC | 1 cut(s) | 552 |
| EcoT14I | CCWWGG | 1 cut(s) | 129 |
| EcoT38I | GRGCYC | 2 cut(s) | 47, 1047 |
| ErhI | CCWWGG | 1 cut(s) | 129 |
| Esp3I | CGTCTC | 3 cut(s) | 194, 1156, 1440 |
| FaeI | CATG | 7 cut(s) | 120, 517, 782, 957, 1007, 1479, 1497 |
| FatI | CATG | 7 cut(s) | 116, 513, 778, 953, 1003, 1475, 1493 |
| FauNDI | CATATG | 1 cut(s) | 445 |
| FbaI | TGATCA | 1 cut(s) | 13 |
| FblI | GTMKAC | 1 cut(s) | 1397 |
| FokI | GGATG | 2 cut(s) | 745, 1540 |
| FriOI | GRGCYC | 2 cut(s) | 47, 1047 |
| FspBI | CTAG | 1 cut(s) | 348 |
| GlaI | GCGC | 1 cut(s) | 450 |
| HaeIII | GGCC | 1 cut(s) | 1141 |
| HapII | CCGG | 5 cut(s) | 22, 452, 1198, 1393, 1487 |
| HgaI | GACGC | 1 cut(s) | 1183 |
| HhaI | GCGC | 1 cut(s) | 451 |
| Hin1II | CATG | 7 cut(s) | 120, 517, 782, 957, 1007, 1479, 1497 |
| Hin6I | GCGC | 1 cut(s) | 449 |
| HinP1I | GCGC | 1 cut(s) | 449 |
| HindIII | AAGCTT | 1 cut(s) | 1421 |
| HinfI | GANTC | 8 cut(s) | 427, 908, 1094, 1201, 1460, 1511, 1556, 1579 |
| HpaII | CCGG | 5 cut(s) | 22, 452, 1198, 1393, 1487 |
| HphI | GGTGA | 5 cut(s) | 386, 707, 716, 1187, 1551 |
| Hpy166II | GTNNAC | 1 cut(s) | 1398 |
| Hpy188I | TCNGA | 4 cut(s) | 13, 438, 724, 1465 |
| Hpy188III | TCNNGA | 8 cut(s) | 35, 51, 283, 587, 986, 1171, 1457, 1518 |
| Hpy8I | GTNNAC | 1 cut(s) | 1398 |
| Hpy99I | CGWCG | 1 cut(s) | 41 |
| HpyAV | CCTTC | 3 cut(s) | 64, 559, 1099 |
| HpyCH4III | ACNGT | 4 cut(s) | 275, 808, 1118, 1229 |
| HpyCH4IV | ACGT | 1 cut(s) | 187 |
| HpyCH4V | TGCA | 7 cut(s) | 146, 164, 524, 533, 852, 1156, 1241 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 149, 353, 457, 530, 1429 |
| HpyF3I | CTNAG | 9 cut(s) | 139, 191, 229, 437, 737, 1290, 1348, 1563, 1584 |
| HpySE526I | ACGT | 1 cut(s) | 187 |
| Hsp92II | CATG | 7 cut(s) | 120, 517, 782, 957, 1007, 1479, 1497 |
| HspAI | GCGC | 1 cut(s) | 449 |
| KroI | GCCGGC | 1 cut(s) | 451 |
| KroNI | GCCGGC | 1 cut(s) | 453 |
| Ksp22I | TGATCA | 1 cut(s) | 13 |
| Kzo9I | GATC | 2 cut(s) | 13, 292 |
| LguI | GCTCTTC | 2 cut(s) | 52, 501 |
| LmnI | GCTCC | 2 cut(s) | 125, 1031 |
| LweI | GCATC | 3 cut(s) | 151, 338, 723 |
| MabI | ACCWGGT | 1 cut(s) | 1249 |
| MaeI | CTAG | 1 cut(s) | 348 |
| MaeII | ACGT | 1 cut(s) | 187 |
| MaeIII | GTNAC | 5 cut(s) | 32, 334, 1223, 1309, 1412 |
| MalI | GATC | 2 cut(s) | 15, 294 |
| MboI | GATC | 2 cut(s) | 13, 292 |
| MhlI | GDGCHC | 3 cut(s) | 47, 513, 1047 |
| MluCI | AATT | 6 cut(s) | 112, 660, 714, 949, 1057, 1146 |
| MlyI | GAGTC | 1 cut(s) | 1520 |
| MmeI | TCCRAC | 2 cut(s) | 394, 459 |
| MroNI | GCCGGC | 1 cut(s) | 451 |
| MroXI | GAANNNNTTC | 1 cut(s) | 718 |
| MseI | TTAA | 1 cut(s) | 396 |
| MslI | CAYNNNNRTG | 1 cut(s) | 777 |
| MspA1I | CMGCKG | 1 cut(s) | 143 |
| MspI | CCGG | 5 cut(s) | 22, 452, 1198, 1393, 1487 |
| MspR9I | CCNGG | 2 cut(s) | 1251, 1487 |
| MvaI | CCWGG | 1 cut(s) | 1251 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 149, 353, 457, 530, 1429 |
| NaeI | GCCGGC | 1 cut(s) | 453 |
| NciI | CCSGG | 1 cut(s) | 1487 |
| NdeI | CATATG | 1 cut(s) | 445 |
| NdeII | GATC | 2 cut(s) | 13, 292 |
| NgoMIV | GCCGGC | 1 cut(s) | 451 |
| NlaIII | CATG | 7 cut(s) | 120, 517, 782, 957, 1007, 1479, 1497 |
| NlaIV | GGNNCC | 2 cut(s) | 1142, 1255 |
| NmuCI | GTSAC | 2 cut(s) | 32, 1309 |
| PciSI | GCTCTTC | 2 cut(s) | 52, 501 |
| PdiI | GCCGGC | 1 cut(s) | 453 |
| PdmI | GAANNNNTTC | 1 cut(s) | 718 |
| PfeI | GAWTC | 7 cut(s) | 427, 908, 1094, 1201, 1460, 1556, 1579 |
| PinAI | ACCGGT | 1 cut(s) | 21 |
| PleI | GAGTC | 1 cut(s) | 1519 |
| PpsI | GAGTC | 1 cut(s) | 1519 |
| PpuMI | RGGWCCY | 1 cut(s) | 133 |
| Psp124BI | GAGCTC | 1 cut(s) | 47 |
| Psp5II | RGGWCCY | 1 cut(s) | 133 |
| Psp6I | CCWGG | 1 cut(s) | 1249 |
| PspEI | GGTNACC | 1 cut(s) | 1412 |
| PspGI | CCWGG | 1 cut(s) | 1249 |
| PspN4I | GGNNCC | 2 cut(s) | 1142, 1255 |
| PspPI | GGNCC | 3 cut(s) | 133, 1140, 1390 |
| PspPPI | RGGWCCY | 1 cut(s) | 133 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 289, 321 |
| PstI | CTGCAG | 2 cut(s) | 526, 854 |
| PvuII | CAGCTG | 1 cut(s) | 143 |
| RsaI | GTAC | 3 cut(s) | 186, 221, 1357 |
| RsaNI | GTAC | 3 cut(s) | 185, 220, 1356 |
| RseI | CAYNNNNRTG | 1 cut(s) | 777 |
| SacI | GAGCTC | 1 cut(s) | 47 |
| SapI | GCTCTTC | 2 cut(s) | 52, 501 |
| SaqAI | TTAA | 1 cut(s) | 396 |
| Sau3AI | GATC | 2 cut(s) | 13, 292 |
| Sau96I | GGNCC | 3 cut(s) | 133, 1140, 1390 |
| ScaI | AGTACT | 1 cut(s) | 1357 |
| SchI | GAGTC | 1 cut(s) | 1520 |
| ScrFI | CCNGG | 2 cut(s) | 1251, 1487 |
| SduI | GDGCHC | 3 cut(s) | 47, 513, 1047 |
| SexAI | ACCWGGT | 1 cut(s) | 1249 |
| SfaNI | GCATC | 3 cut(s) | 151, 338, 723 |
| SfcI | CTRYAG | 3 cut(s) | 522, 850, 1020 |
| SinI | GGWCC | 2 cut(s) | 133, 1390 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 777 |
| SmlI | CTYRAG | 2 cut(s) | 995, 1295 |
| SmoI | CTYRAG | 2 cut(s) | 995, 1295 |
| Sse9I | AATT | 6 cut(s) | 112, 660, 714, 949, 1057, 1146 |
| SspI | AATATT | 1 cut(s) | 1039 |
| SspMI | CTAG | 1 cut(s) | 348 |
| SstI | GAGCTC | 1 cut(s) | 47 |
| StyD4I | CCNGG | 2 cut(s) | 1249, 1485 |
| StyI | CCWWGG | 1 cut(s) | 129 |
| TaaI | ACNGT | 4 cut(s) | 275, 808, 1118, 1229 |
| TaiI | ACGT | 1 cut(s) | 190 |
| TaqI | TCGA | 3 cut(s) | 282, 425, 586 |
| TasI | AATT | 6 cut(s) | 112, 660, 714, 949, 1057, 1146 |
| TatI | WGTACW | 1 cut(s) | 1355 |
| TfiI | GAWTC | 7 cut(s) | 427, 908, 1094, 1201, 1460, 1556, 1579 |
| Tru1I | TTAA | 1 cut(s) | 396 |
| Tru9I | TTAA | 1 cut(s) | 396 |
| TscAI | CASTG | 3 cut(s) | 184, 348, 859 |
| TseFI | GTSAC | 2 cut(s) | 32, 1309 |
| Tsp45I | GTSAC | 2 cut(s) | 32, 1309 |
| TspDTI | ATGAA | 5 cut(s) | 105, 942, 962, 1118, 1521 |
| TspRI | CASTG | 3 cut(s) | 184, 348, 859 |
| VpaK11BI | GGWCC | 2 cut(s) | 133, 1390 |
| XapI | RAATTY | 2 cut(s) | 949, 1057 |
| XmiI | GTMKAC | 1 cut(s) | 1397 |
| XmnI | GAANNNNTTC | 1 cut(s) | 718 |
| XspI | CTAG | 1 cut(s) | 348 |
| ZrmI | AGTACT | 1 cut(s) | 1357 |