Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr11

Orthogroup ID

OG0004366

Physical Location & Seq

Genomic Coordinates Reverse (-)

18803655 .. 18811049

Gene Structure 7395 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD11G1171700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1674 bp

ATGCCCATGCCCATGGGGACCCCGAAGAAGATCAGGAAGAAGCAAACTCCAGAAACCCAATTCCACTCCTCCCTCACTCTCTGCTCCAAGCACAAAGACCTCCCCGCCGCTATCTCCCTCTACGAATCCGCCCTTTCTCAGAACACTCGCTTCAACCACCACCACTTCAACACCCTCCTCTACCTCTGCTCAAACTCCGTCTCCGACTCCTCTCTCAAGCAGTTGGCTTCCGAAAATGGCTTCCGCATGTTCGATCACATGTTGTCCATCGGGATACTTCCGAATGAGGCCACCATCACCGCCGTGGCCAGGCTCGCTGCGGCCAAGGGCGACGGGGATTACGCGTTTGGGCTGGTGAAGGGTATGGAGAAGTATAACATATTTCCGAAGTTGCGGAGTTATGACCCAGCATTGTTTTGCTTTTGCGAGAAATCGGAGGCGGAGAAGGCGTATGAGGTGGAGGAGCATATGGGTATGGTGGGGGTGAGCCTGGAGGAGCCGGAGATTGCGGCGTTATTGAAGGTGAGCGCGGAGACAGGAAATGGGGAGAGGGTTTATGGGTACTTGCATAAGCTGAGGAATGTCGGGAGGTGTGTTAATGAATCAACGGTGAAGAACATTGAGGATTGGTTTTGTGGCGGCGCGGCTTGTGAGGTGGGTGAGGCGAATTGGGATTCGAGTCGGGTTAAAGAGTTGGTTTTGGGGAATGGAGGAGGGTGGCACGGGCAGGGGTGGATTGGGAAGGGCGGTTGGGATGTTAGGAGAACCACTGTGGATTTGAGCAGCAGTCAATGTAGCTCTTGTGGTGAGCGTTTGGTTTGTGTTGACATTGATTGCGGGGCGACCGAGAGGTTTGCGCAGTCGGTTGCTGCTTTGGCAATGGAAAGGGAGGTTAAGTTGAATTTCAGTGAGTTCCAGGATTGGCTGGACAAGCATGCTGAGTATGAAGCTATAGTGGATGGAGCTAATATTGGGCTTTACCAGCAGAATTTCGCAGATGGTGGATTCAGTCTTACTCAGCAGCTCGACGTTGTTGTAAAAGAATTGTACAATAGGAGTGGAGGGAAATGGCCACTTGTTGTCATGCATAATAGACGTTTCCGGGGACTTGTGGAAAATCCTTGCCACAGAAAATTGGTCGAGGAGTGGATGGGTAAAGGCATTCTTTATGCCACACCGAGTGGTTCCAATGATGATTGGTATTGGCTCTATGCTGCTGTGAAACTCAAATGCTTGCTTGTTACGAACGATGAAATGCGAGATCACATTTTTGAACTCCTAGGAAGCAGCTTCTTTCTCAAGTGGAAAGAGAGACACCAAGTTCGATACACTTTTGTCAAAGGCAATGTGAAACTTAAGATGCCGCCCCCATATTCTTCAGTCATCCAGGAATCCGAAAATGGATCATGGCATGTGCCCATAGCAGATGAAAGCTGTCAGGAGCCTGCAAGAACCTGGCTCTGTATTACACGGCCAAGTGTATCGAAAGCTTGTGGTGAAGTCTCACAGAATTTGGCATCTTCTCAGAACGGTGTTATTTGCCAACACCATGAGTTACTAAGATCATGCACATCGGAGCCTGTTGCCAGTCACCGTGATAAAACCACATTTGTGACAGGTAAAAGAAAAGAGAGGTCACCATCTCCTTCCCGTATAAATATTTCTCCTGCCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000966 GO:0001682 GO:0003674 GO:0003824 GO:0004518 GO:0004519 GO:0004521 GO:0004526 GO:0004540 GO:0004549 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006396 GO:0006397 GO:0006399 GO:0006725 GO:0006807 GO:0008033 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0016074 GO:0016787 GO:0016788 GO:0016891 GO:0016893 GO:0034470 GO:0034471 GO:0034641 GO:0034660 GO:0043144 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0090501 GO:0090502 GO:0099116 GO:0140098 GO:0140101 GO:1901360

KEGG Pathways

Metabolic & Signaling

ko03013 map03013

Pfam Domains

Protein Families

PPR_long PRORP

Protein Analysis

558

Amino Acids

62.29

Weight (kDa)

6.81

Isoelectric Point (pI)

48.62

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_long	PF17177	10 - 217	4.8e-80	Pentacotripeptide-repeat region of PRORP
PRORP	PF16953	262 - 488	2.8e-58	Protein-only RNase P
RNase_Zc3h12a	PF11977	317 - 450	4.3e-06	Zc3h12a-like Ribonuclease NYN domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004366)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G16650 AT2G16650 AT4G21900 AT5G60430 AT5G60430 AT5G60430 AT5G60430
fragaria_vesca	FvH4_3g24550 FvH4_3g24550 FvH4_3g24550
malus_domestica	MD03G1141100.v1.1 MD11G1171700.v1.1
prunus_persica	Prupe.6G126500_v2.0.a1
pyrus_communis	pycom03g09600
rosa_chinensis	RchiOBHm_Chr5g0043991
rosa_laevigata	RLG00000034233 RLG00000034235
rosa_multiflora	Rmu_sc0001157.1_g000006
rosa_roxburghii	Rroxscaffold_1G00037010
rosa_rugosa	Rorug05G0209600 Rorug05G0209700 Rorug05G0209700 Rorug05G0209800 Rorug05G0209900 Rorug05G0210000 Rorug05G0210100.1 Rorug05G0210200
rosa_samantha	Rh5AG294100 Rh5BG302500 Rh5CG329700 Rh5DG311300
rosa_wichuraiana	Rw5G027270

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	858
AccII	CGCG	3 cut(s)	344, 530, 644
AclWI	GGATC	1 cut(s)	1411
AcoI	YGGCCR	4 cut(s)	306, 321, 1070, 1472
AcsI	RAATTY	3 cut(s)	901, 988, 1510
AcuI	CTGAAG	1 cut(s)	1362
AdeI	CACNNNGTG	1 cut(s)	1181
AfaI	GTAC	2 cut(s)	563, 1049
AfiI	CCNNNNNNNGG	1 cut(s)	309
AflII	CTTAAG	1 cut(s)	1355
AflIII	ACRYGT	2 cut(s)	258, 342
AgsI	TTSAA	5 cut(s)	154, 169, 520, 901, 1274
AjnI	CCWGG	5 cut(s)	308, 489, 915, 1386, 1454
AleI	CACNNNNGTG	2 cut(s)	302, 1610
AluBI	AGCT	8 cut(s)	574, 798, 950, 965, 1024, 1290, 1434, 1490
AluI	AGCT	8 cut(s)	574, 798, 950, 965, 1024, 1290, 1434, 1490
Alw26I	GTCTC	4 cut(s)	205, 527, 1306, 1507
AlwI	GGATC	1 cut(s)	1411
AoxI	GGCC	5 cut(s)	288, 306, 321, 1070, 1472
ApeKI	GCWGC	6 cut(s)	317, 783, 869, 1021, 1214, 1287
ApoI	RAATTY	3 cut(s)	901, 988, 1510
ArsI	GACNNNNNNTTYG	2 cut(s)	1305, 1337
AspA2I	CCTAGG	1 cut(s)	1279
AspLEI	GCGC	3 cut(s)	530, 644, 859
AspS9I	GGNCC	1 cut(s)	18
AsuC2I	CCSGG	1 cut(s)	1103
AvaII	GGWCC	1 cut(s)	18
AvrII	CCTAGG	1 cut(s)	1279
BaeGI	GKGCMC	1 cut(s)	1419
BalI	TGGCCA	2 cut(s)	308, 1072
BbvCI	CCTCAGC	1 cut(s)	575
BbvI	GCAGC	6 cut(s)	304, 795, 856, 1033, 1201, 1299
BccI	CCATC	6 cut(s)	275, 302, 953, 992, 1144, 1648
BceAI	ACGGC	2 cut(s)	287, 1487
BcgI	CGANNNNNNTGC	2 cut(s)	836, 870
BciT130I	CCWGG	5 cut(s)	310, 491, 917, 1388, 1456
BciVI	GTATCC	1 cut(s)	267
BcnI	CCSGG	1 cut(s)	1103
BcoDI	GTCTC	4 cut(s)	205, 527, 1306, 1507
BfaI	CTAG	2 cut(s)	1280, 1672
BfmI	CTRYAG	1 cut(s)	951
BfrI	CTTAAG	1 cut(s)	1355
BfuI	GTATCC	1 cut(s)	267
BlnI	CCTAGG	1 cut(s)	1279
Bme1390I	CCNGG	6 cut(s)	310, 491, 917, 1103, 1388, 1456
Bme18I	GGWCC	1 cut(s)	18
BmgT120I	GGNCC	1 cut(s)	18
BmiI	GGNNCC	6 cut(s)	19, 20, 498, 1186, 1443, 1578
BmrFI	CCNGG	6 cut(s)	310, 491, 917, 1103, 1388, 1456
BmsI	GCATC	2 cut(s)	1350, 1526
BpmI	CTGGAG	2 cut(s)	33, 512
Bpu10I	CCTNAGC	1 cut(s)	575
BpuEI	CTTGAG	2 cut(s)	200, 1283
BpuMI	CCSGG	1 cut(s)	1103
BsaJI	CCNNGG	5 cut(s)	12, 303, 324, 1102, 1279
BsaXI	ACNNNNNCTCC	6 cut(s)	185, 215, 434, 464, 881, 911
Bsc4I	CCNNNNNNNGG	1 cut(s)	309
Bse1I	ACTGG	1 cut(s)	1587
Bse3DI	GCAATG	2 cut(s)	885, 1351
BseBI	CCWGG	5 cut(s)	310, 491, 917, 1388, 1456
BseDI	CCNNGG	5 cut(s)	12, 303, 324, 1102, 1279
BseGI	GGATG	4 cut(s)	760, 964, 1155, 1383
BseLI	CCNNNNNNNGG	1 cut(s)	309
BseMI	GCAATG	2 cut(s)	885, 1351
BseMII	CTCAG	5 cut(s)	152, 566, 930, 1031, 1538
BseNI	ACTGG	1 cut(s)	1587
BseRI	GAGGAG	7 cut(s)	58, 167, 199, 476, 509, 726, 1157
BseSI	GKGCMC	1 cut(s)	1419
BseXI	GCAGC	6 cut(s)	304, 795, 856, 1033, 1201, 1299
BseYI	CCCAGC	1 cut(s)	406
Bsh1236I	CGCG	3 cut(s)	344, 530, 644
Bsh1285I	CGRYCG	1 cut(s)	846
BshFI	GGCC	5 cut(s)	290, 308, 323, 1072, 1474
BsiEI	CGRYCG	1 cut(s)	846
BsiSI	CCGG	2 cut(s)	500, 1102
BslFI	GGGAC	2 cut(s)	31, 1119
BslI	CCNNNNNNNGG	1 cut(s)	309
BsmAI	GTCTC	4 cut(s)	205, 527, 1306, 1507
BsmBI	CGTCTC	1 cut(s)	205
BsmFI	GGGAC	2 cut(s)	31, 1119
BsmI	GAATGC	1 cut(s)	1161
BsnI	GGCC	5 cut(s)	290, 308, 323, 1072, 1474
Bsp1286I	GDGCHC	1 cut(s)	1419
Bsp1407I	TGTACA	1 cut(s)	1047
Bsp143I	GATC	5 cut(s)	30, 253, 1261, 1403, 1562
Bsp19I	CCATGG	1 cut(s)	12
BspANI	GGCC	5 cut(s)	290, 308, 323, 1072, 1474
BspCNI	CTCAG	5 cut(s)	151, 567, 931, 1030, 1537
BspFNI	CGCG	3 cut(s)	344, 530, 644
BspLI	GGNNCC	6 cut(s)	19, 20, 498, 1186, 1443, 1578
BspPI	GGATC	1 cut(s)	1411
BspTI	CTTAAG	1 cut(s)	1355
BsrDI	GCAATG	2 cut(s)	885, 1351
BsrGI	TGTACA	1 cut(s)	1047
BsrI	ACTGG	1 cut(s)	1587
BssECI	CCNNGG	5 cut(s)	12, 303, 324, 1102, 1279
BssMI	GATC	5 cut(s)	30, 253, 1261, 1403, 1562
BssT1I	CCWWGG	3 cut(s)	12, 324, 1279
Bst2UI	CCWGG	5 cut(s)	310, 491, 917, 1388, 1456
Bst4CI	ACNGT	4 cut(s)	610, 772, 1532, 1595
BstAFI	CTTAAG	1 cut(s)	1355
BstAUI	TGTACA	1 cut(s)	1047
BstC8I	GCNNGC	4 cut(s)	315, 936, 1235, 1446
BstDEI	CTNAG	6 cut(s)	138, 575, 939, 1017, 1524, 1559
BstDSI	CCRYGG	2 cut(s)	12, 303
BstEII	GGTNACC	1 cut(s)	1635
BstF5I	GGATG	4 cut(s)	760, 964, 1155, 1383
BstFNI	CGCG	3 cut(s)	344, 530, 644
BstHHI	GCGC	3 cut(s)	530, 644, 859
BstKTI	GATC	5 cut(s)	33, 256, 1264, 1406, 1565
BstMAI	GTCTC	4 cut(s)	205, 527, 1306, 1507
BstMBI	GATC	5 cut(s)	30, 253, 1261, 1403, 1562
BstMCI	CGRYCG	1 cut(s)	846
BstMWI	GCNNNNNNNGC	5 cut(s)	314, 446, 875, 931, 982
BstNI	CCWGG	5 cut(s)	310, 491, 917, 1388, 1456
BstNSI	RCATGY	4 cut(s)	250, 262, 938, 1415
BstPI	GGTNACC	1 cut(s)	1635
BstSCI	CCNGG	6 cut(s)	308, 489, 915, 1101, 1386, 1454
BstSFI	CTRYAG	1 cut(s)	951
BstSLI	GKGCMC	1 cut(s)	1419
BstUI	CGCG	3 cut(s)	344, 530, 644
BstV1I	GCAGC	6 cut(s)	304, 795, 856, 1033, 1201, 1299
BstXI	CCANNNNNNTGG	1 cut(s)	13
BsuI	GTATCC	1 cut(s)	267
BsuRI	GGCC	5 cut(s)	290, 308, 323, 1072, 1474
BtgI	CCRYGG	2 cut(s)	12, 303
BtsCI	GGATG	4 cut(s)	760, 964, 1155, 1383
BtsIMutI	CAGTG	2 cut(s)	768, 913
Cac8I	GCNNGC	4 cut(s)	315, 936, 1235, 1446
CfoI	GCGC	3 cut(s)	530, 644, 859
Cfr13I	GGNCC	1 cut(s)	18
Csp6I	GTAC	2 cut(s)	562, 1048
CspCI	CAANNNNNGTGG	2 cut(s)	1039, 1074
CviQI	GTAC	2 cut(s)	562, 1048
DdeI	CTNAG	6 cut(s)	138, 575, 939, 1017, 1524, 1559
DpnI	GATC	5 cut(s)	32, 255, 1263, 1405, 1564
DpnII	GATC	5 cut(s)	30, 253, 1261, 1403, 1562
DraIII	CACNNNGTG	1 cut(s)	1181
EaeI	YGGCCR	4 cut(s)	306, 321, 1070, 1472
EciI	GGCGGA	2 cut(s)	118, 455
Eco130I	CCWWGG	3 cut(s)	12, 324, 1279
Eco47I	GGWCC	1 cut(s)	18
Eco57I	CTGAAG	1 cut(s)	1362
Eco91I	GGTNACC	1 cut(s)	1635
EcoO109I	RGGNCCY	1 cut(s)	18
EcoO65I	GGTNACC	1 cut(s)	1635
EcoRII	CCWGG	5 cut(s)	308, 489, 915, 1386, 1454
EcoT14I	CCWWGG	3 cut(s)	12, 324, 1279
EcoT22I	ATGCAT	1 cut(s)	1089
ErhI	CCWWGG	3 cut(s)	12, 324, 1279
Esp3I	CGTCTC	1 cut(s)	205
FalI	AAGNNNNNCTT	2 cut(s)	1149, 1181
FaqI	GGGAC	2 cut(s)	31, 1119
FauI	CCCGC	2 cut(s)	112, 830
FauNDI	CATATG	1 cut(s)	468
FokI	GGATG	4 cut(s)	767, 971, 1162, 1370
FspBI	CTAG	2 cut(s)	1280, 1672
FspI	TGCGCA	1 cut(s)	858
GlaI	GCGC	3 cut(s)	529, 643, 858
GsaI	CCCAGC	1 cut(s)	410
GsuI	CTGGAG	2 cut(s)	33, 512
HaeIII	GGCC	5 cut(s)	290, 308, 323, 1072, 1474
HapII	CCGG	2 cut(s)	500, 1102
HhaI	GCGC	3 cut(s)	530, 644, 859
Hin6I	GCGC	3 cut(s)	528, 642, 857
HinP1I	GCGC	3 cut(s)	528, 642, 857
HincII	GTYRAC	1 cut(s)	826
HindII	GTYRAC	1 cut(s)	826
HindIII	AAGCTT	1 cut(s)	1488
HinfI	GANTC	7 cut(s)	125, 206, 602, 674, 679, 1005, 1391
HpaII	CCGG	2 cut(s)	500, 1102
Hpy166II	GTNNAC	1 cut(s)	826
Hpy188I	TCNGA	9 cut(s)	141, 205, 232, 282, 387, 436, 1396, 1527, 1576
Hpy188III	TCNNGA	5 cut(s)	34, 50, 271, 586, 1439
Hpy8I	GTNNAC	1 cut(s)	826
Hpy99I	CGWCG	2 cut(s)	335, 1031
HpyAV	CCTTC	5 cut(s)	352, 439, 514, 736, 1656
HpyCH4III	ACNGT	4 cut(s)	610, 772, 1532, 1595
HpyCH4IV	ACGT	2 cut(s)	1029, 1096
HpyCH4V	TGCA	4 cut(s)	568, 1087, 1448, 1569
HpyF10VI	GCNNNNNNNGC	5 cut(s)	314, 446, 875, 931, 982
HpyF3I	CTNAG	6 cut(s)	138, 575, 939, 1017, 1524, 1559
HpySE526I	ACGT	2 cut(s)	1029, 1096
HspAI	GCGC	3 cut(s)	528, 642, 857
KflI	GGGWCCC	1 cut(s)	18
Kzo9I	GATC	5 cut(s)	30, 253, 1261, 1403, 1562
LmnI	GCTCC	6 cut(s)	89, 463, 496, 962, 1441, 1576
Lsp1109I	GCAGC	6 cut(s)	304, 795, 856, 1033, 1201, 1299
LweI	GCATC	2 cut(s)	1350, 1526
MaeI	CTAG	2 cut(s)	1280, 1672
MaeII	ACGT	2 cut(s)	1029, 1096
MaeIII	GTNAC	5 cut(s)	1240, 1554, 1589, 1612, 1635
MalI	GATC	5 cut(s)	32, 255, 1263, 1405, 1564
MboI	GATC	5 cut(s)	30, 253, 1261, 1403, 1562
MboII	GAAGA	6 cut(s)	37, 40, 49, 625, 1368, 1512
MhlI	GDGCHC	1 cut(s)	1419
MlsI	TGGCCA	2 cut(s)	308, 1072
MluCI	AATT	7 cut(s)	59, 667, 901, 988, 1043, 1133, 1510
MluI	ACGCGT	1 cut(s)	342
MluNI	TGGCCA	2 cut(s)	308, 1072
MlyI	GAGTC	2 cut(s)	200, 688
MmeI	TCCRAC	1 cut(s)	228
Mox20I	TGGCCA	2 cut(s)	308, 1072
Mph1103I	ATGCAT	1 cut(s)	1089
MscI	TGGCCA	2 cut(s)	308, 1072
MseI	TTAA	4 cut(s)	597, 687, 894, 1356
MslI	CAYNNNNRTG	3 cut(s)	11, 302, 1610
Msp20I	TGGCCA	2 cut(s)	308, 1072
MspCI	CTTAAG	1 cut(s)	1355
MspI	CCGG	2 cut(s)	500, 1102
MspR9I	CCNGG	6 cut(s)	310, 491, 917, 1103, 1388, 1456
Mva1269I	GAATGC	1 cut(s)	1161
MvaI	CCWGG	5 cut(s)	310, 491, 917, 1388, 1456
MvnI	CGCG	3 cut(s)	344, 530, 644
MwoI	GCNNNNNNNGC	5 cut(s)	314, 446, 875, 931, 982
NciI	CCSGG	1 cut(s)	1103
NcoI	CCATGG	1 cut(s)	12
NdeI	CATATG	1 cut(s)	468
NdeII	GATC	5 cut(s)	30, 253, 1261, 1403, 1562
NlaIV	GGNNCC	6 cut(s)	19, 20, 498, 1186, 1443, 1578
NmuCI	GTSAC	3 cut(s)	1589, 1612, 1635
NsbI	TGCGCA	1 cut(s)	858
NsiI	ATGCAT	1 cut(s)	1089
NspI	RCATGY	4 cut(s)	250, 262, 938, 1415
OliI	CACNNNNGTG	2 cut(s)	302, 1610
PaeI	GCATGC	1 cut(s)	938
PciI	ACATGT	1 cut(s)	258
PctI	GAATGC	1 cut(s)	1161
PfeI	GAWTC	5 cut(s)	125, 602, 674, 1005, 1391
PfoI	TCCNGGA	2 cut(s)	915, 1386
PleI	GAGTC	2 cut(s)	200, 687
PpsI	GAGTC	2 cut(s)	200, 687
PpuMI	RGGWCCY	1 cut(s)	18
PscI	ACATGT	1 cut(s)	258
Psp5II	RGGWCCY	1 cut(s)	18
Psp6I	CCWGG	5 cut(s)	308, 489, 915, 1386, 1454
PspEI	GGTNACC	1 cut(s)	1635
PspFI	CCCAGC	1 cut(s)	406
PspGI	CCWGG	5 cut(s)	308, 489, 915, 1386, 1454
PspN4I	GGNNCC	6 cut(s)	19, 20, 498, 1186, 1443, 1578
PspPI	GGNCC	1 cut(s)	18
PspPPI	RGGWCCY	1 cut(s)	18
RsaI	GTAC	2 cut(s)	563, 1049
RsaNI	GTAC	2 cut(s)	562, 1048
RseI	CAYNNNNRTG	3 cut(s)	11, 302, 1610
SaqAI	TTAA	4 cut(s)	597, 687, 894, 1356
Sau3AI	GATC	5 cut(s)	30, 253, 1261, 1403, 1562
Sau96I	GGNCC	1 cut(s)	18
SchI	GAGTC	2 cut(s)	200, 688
ScrFI	CCNGG	6 cut(s)	310, 491, 917, 1103, 1388, 1456
SduI	GDGCHC	1 cut(s)	1419
SfaNI	GCATC	2 cut(s)	1350, 1526
SfcI	CTRYAG	1 cut(s)	951
SinI	GGWCC	1 cut(s)	18
SmiMI	CAYNNNNRTG	3 cut(s)	11, 302, 1610
SmlI	CTYRAG	3 cut(s)	215, 1298, 1355
SmoI	CTYRAG	3 cut(s)	215, 1298, 1355
SphI	GCATGC	1 cut(s)	938
Sse9I	AATT	7 cut(s)	59, 667, 901, 988, 1043, 1133, 1510
SspI	AATATT	2 cut(s)	970, 1660
SspMI	CTAG	2 cut(s)	1280, 1672
StyD4I	CCNGG	6 cut(s)	308, 489, 915, 1101, 1386, 1454
StyI	CCWWGG	3 cut(s)	12, 324, 1279
TaaI	ACNGT	4 cut(s)	610, 772, 1532, 1595
TaiI	ACGT	2 cut(s)	1032, 1099
TaqI	TCGA	6 cut(s)	252, 677, 1026, 1140, 1324, 1484
TaqII	GACCGA	1 cut(s)	860
TasI	AATT	7 cut(s)	59, 667, 901, 988, 1043, 1133, 1510
TatI	WGTACW	1 cut(s)	1047
TauI	GCSGC	6 cut(s)	110, 323, 512, 642, 647, 1366
TfiI	GAWTC	5 cut(s)	125, 602, 674, 1005, 1391
Tru1I	TTAA	4 cut(s)	597, 687, 894, 1356
Tru9I	TTAA	4 cut(s)	597, 687, 894, 1356
TscAI	CASTG	2 cut(s)	775, 913
TseFI	GTSAC	3 cut(s)	1589, 1612, 1635
TseI	GCWGC	6 cut(s)	317, 783, 869, 1021, 1214, 1287
Tsp45I	GTSAC	3 cut(s)	1589, 1612, 1635
TspDTI	ATGAA	4 cut(s)	615, 960, 1266, 1443
TspGWI	ACGGA	1 cut(s)	187
TspRI	CASTG	2 cut(s)	775, 913
Vha464I	CTTAAG	1 cut(s)	1355
VpaK11BI	GGWCC	1 cut(s)	18
XapI	RAATTY	3 cut(s)	901, 988, 1510
XceI	RCATGY	4 cut(s)	250, 262, 938, 1415
XcmI	CCANNNNNNNNNTGG	1 cut(s)	301
XmaJI	CCTAGG	1 cut(s)	1279
XspI	CTAG	2 cut(s)	1280, 1672
Zsp2I	ATGCAT	1 cut(s)	1089

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.