Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr03

Orthogroup ID

OG0004366

Physical Location & Seq

Genomic Coordinates Forward (+)

14861007 .. 14867736

Gene Structure 6730 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD03G1141100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1665 bp

ATGCCAATGGGGACCCCGAAGAAGATCAAGAAGAAGCAAACCCCAGAAGCCCAATTCCACTCCTCCCTCACTCTCTGCTCCAAGCACAAAGACCTCCCCACCGCCATCTCCCTCTACGAATCCGCCGTTTCTCAGAACACCCGTCTCAACCACCACCACTTCAACACTCTCCTCTACCTCTGCTCAAACTCCGTCGCCGACCCCTCCATCAAGCAATTGGCCTTGGAAAATGGCTTCCGCATGTTCGATCACATGTTATCCATCGGGGTACTTCCGAATGAGGCCACCATCACCGCCATGGCCCGGCTTGCCGCGGCCAAAGGCGATGGGGATTACGCGTTTGGGCTGGTGAAGGGTATGGAGAAGTATAAAATTTTTCCGAGGTTGCGGAGTTATGACCCGGCATTGTTTTGCTTTTGCGAGAAATTGGAGGCGGAGAAGGCGTATGAGGTGGAGGAGCATATGGGTATGGTGGGGGTGAGCCTGGAGGAGCCGGAGATTGCAGCGTTGTTGAAGGTCAGCGCGGAAACGGGAAATGGGGAGAGGGTTTATGGGTACTTGCATAAGTTGAGGAATGCAGGGAGGTGTGTTAGTGAATCAACGGCCAAGAACATTGAGGATTGGTTTTGTGGTGGAGCGGCTTGTGAGGTGGGTGAGGTGAATTGGGACTCGGTTCGGGTTAAAGAGTCAGTTTTGAGGAATGGAGGAGGGTGGCACGGGCAAGGGTGGATCGGGAAGGGGGTTTGGGATGTGAAGAGAACCAATGTGGATTTGAGCAGCAGTCAATGTAGCTCTTGTGGTGAGCGTTTAGTTTGTGTTGACCTTGATTGTGCGGAGACGGAGAGGTTTGTGAAGTCGGTTGCTGCTTTGGCAATGGAAAGGGAGGTTAAGTCTAATTTCAGTGAGTTCCAGGATTGGCTGGACAAGCATGCTGAGTATGAAGCTATAGTGGATGGAGCTAATATTGGGCTTTACCAGCAAAATTTCGCTGATGGTAGATTCAGTCTTACTCAGCAGCTCGACGCTGTTGTAAAAGAATTGTACAATAGGAGTGGAGGGAAATGGCCACTTGTTGTCATGCATAATAGACGTTTCCGGGGACTTGTGGAAAATCCTTCCCACAGAAAACTGTTCGAGGAGTGGATGGGTAAAGGCATTCTTTATGCCACACCGAGTGGTTCCAATGACGATTGGTATTGGCTCTATGCTGCTGTGAAACTCAAATGCTTGCTCGTTACAAACGATGAAATGCGAGATCACATTTTTGAACTCCTAGGAAGCAGCTTCTTTCTCAAGTGGAAAGAGAGACACCAAGTTCGATACACTTTTGCCAAAGGCAATCTGAAACTTCAGATGCCGCCCGCATATTCTTCAGTCATCCAGGAATCCGACAATGGATCATGGCATGTCCCCGTAGCAGATGAAAGCTGTCAGGAGCCTGGAAGAACCTGGCTCTGTATTACACGGCAAAGTGTATCTAAAGCTTGTGGTGAAGTCTCACAGAAATTGGCATCTTCTCGGAACGGTGGTATTTGCGACAACCATGAGTTACGATCATGCACATCAGACTCTGTTGCCAGTCACAATGATAAAACCACAGTTGTGACAGGCAAAAGAAAAGAGAGGACGCCATCTCCTTCCCATCTAAATATTTCTCCTGCCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000966 GO:0001682 GO:0003674 GO:0003824 GO:0004518 GO:0004519 GO:0004521 GO:0004526 GO:0004540 GO:0004549 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006396 GO:0006397 GO:0006399 GO:0006725 GO:0006807 GO:0008033 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0016074 GO:0016787 GO:0016788 GO:0016891 GO:0016893 GO:0034470 GO:0034471 GO:0034641 GO:0034660 GO:0043144 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0090501 GO:0090502 GO:0099116 GO:0140098 GO:0140101 GO:1901360

KEGG Pathways

Metabolic & Signaling

ko03013 map03013

Pfam Domains

Protein Families

PPR_long PRORP

Protein Analysis

555

Amino Acids

62.0

Weight (kDa)

7.0

Isoelectric Point (pI)

42.81

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_long	PF17177	8 - 215	1.1e-82	Pentacotripeptide-repeat region of PRORP
PRORP	PF16953	260 - 486	1.7e-58	Protein-only RNase P
RNase_Zc3h12a	PF11977	315 - 447	1.6e-06	Zc3h12a-like Ribonuclease NYN domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004366)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G16650 AT2G16650 AT4G21900 AT5G60430 AT5G60430 AT5G60430 AT5G60430
fragaria_vesca	FvH4_3g24550 FvH4_3g24550 FvH4_3g24550
malus_domestica	MD03G1141100.v1.1 MD11G1171700.v1.1
prunus_persica	Prupe.6G126500_v2.0.a1
pyrus_communis	pycom03g09600
rosa_chinensis	RchiOBHm_Chr5g0043991
rosa_laevigata	RLG00000034233 RLG00000034235
rosa_multiflora	Rmu_sc0001157.1_g000006
rosa_roxburghii	Rroxscaffold_1G00037010
rosa_rugosa	Rorug05G0209600 Rorug05G0209700 Rorug05G0209700 Rorug05G0209800 Rorug05G0209900 Rorug05G0210000 Rorug05G0210100.1 Rorug05G0210200
rosa_samantha	Rh5AG294100 Rh5BG302500 Rh5CG329700 Rh5DG311300
rosa_wichuraiana	Rw5G027270

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	638
AccII	CGCG	3 cut(s)	314, 338, 524
AclWI	GGATC	2 cut(s)	737, 1405
AcoI	YGGCCR	3 cut(s)	315, 603, 1064
AcsI	RAATTY	2 cut(s)	372, 982
AcuI	CTGAAG	2 cut(s)	1334, 1356
AcyI	GRCGYC	1 cut(s)	1628
AdeI	CACNNNGTG	1 cut(s)	1175
AfaI	GTAC	3 cut(s)	270, 557, 1043
AfiI	CCNNNNNNNGG	1 cut(s)	303
AflIII	ACRYGT	2 cut(s)	252, 336
AgsI	TTSAA	3 cut(s)	163, 514, 1268
AjnI	CCWGG	5 cut(s)	483, 909, 1380, 1438, 1448
AleI	CACNNNNGTG	1 cut(s)	1601
AluBI	AGCT	7 cut(s)	792, 944, 959, 1018, 1284, 1428, 1484
AluI	AGCT	7 cut(s)	792, 944, 959, 1018, 1284, 1428, 1484
Alw26I	GTCTC	4 cut(s)	149, 830, 1300, 1501
AlwI	GGATC	2 cut(s)	737, 1405
AlwNI	CAGNNNCTG	1 cut(s)	1571
AoxI	GGCC	6 cut(s)	219, 282, 300, 315, 603, 1064
ApeKI	GCWGC	6 cut(s)	503, 777, 863, 1015, 1208, 1281
ApoI	RAATTY	2 cut(s)	372, 982
ArsI	GACNNNNNNTTYG	2 cut(s)	1299, 1331
AspA2I	CCTAGG	1 cut(s)	1273
AspLEI	GCGC	1 cut(s)	524
AspS9I	GGNCC	2 cut(s)	12, 301
AsuC2I	CCSGG	3 cut(s)	304, 401, 1097
AsuHPI	GGTGA	7 cut(s)	283, 361, 490, 665, 670, 812, 1502
AvaII	GGWCC	1 cut(s)	12
AvrII	CCTAGG	1 cut(s)	1273
BalI	TGGCCA	1 cut(s)	1066
BbvI	GCAGC	6 cut(s)	515, 789, 850, 1027, 1195, 1293
BceAI	ACGGC	3 cut(s)	110, 618, 1481
BciT130I	CCWGG	5 cut(s)	485, 911, 1382, 1440, 1450
BcnI	CCSGG	3 cut(s)	304, 401, 1097
BcoDI	GTCTC	4 cut(s)	149, 830, 1300, 1501
BfaI	CTAG	2 cut(s)	1274, 1663
BfmI	CTRYAG	1 cut(s)	945
BlnI	CCTAGG	1 cut(s)	1273
Bme1390I	CCNGG	8 cut(s)	304, 401, 485, 911, 1097, 1382, 1440, 1450
Bme18I	GGWCC	1 cut(s)	12
BmgT120I	GGNCC	2 cut(s)	12, 301
BmiI	GGNNCC	5 cut(s)	13, 14, 492, 1180, 1437
BmrFI	CCNGG	8 cut(s)	304, 401, 485, 911, 1097, 1382, 1440, 1450
BmsI	GCATC	2 cut(s)	1344, 1520
BpmI	CTGGAG	1 cut(s)	506
BpuEI	CTTGAG	1 cut(s)	1277
BpuMI	CCSGG	3 cut(s)	304, 401, 1097
BsaHI	GRCGYC	1 cut(s)	1628
BsaJI	CCNNGG	6 cut(s)	222, 297, 312, 380, 1096, 1273
BsaXI	ACNNNNNCTCC	6 cut(s)	428, 458, 875, 905, 1618, 1648
Bsc4I	CCNNNNNNNGG	1 cut(s)	303
Bse1I	ACTGG	1 cut(s)	1578
Bse3DI	GCAATG	1 cut(s)	879
BseBI	CCWGG	5 cut(s)	485, 911, 1382, 1440, 1450
BseDI	CCNNGG	6 cut(s)	222, 297, 312, 380, 1096, 1273
BseGI	GGATG	4 cut(s)	754, 958, 1149, 1377
BseLI	CCNNNNNNNGG	1 cut(s)	303
BseMI	GCAATG	1 cut(s)	879
BseMII	CTCAG	3 cut(s)	146, 924, 1025
BseNI	ACTGG	1 cut(s)	1578
BseRI	GAGGAG	6 cut(s)	52, 161, 470, 503, 720, 1151
BseXI	GCAGC	6 cut(s)	515, 789, 850, 1027, 1195, 1293
Bsh1236I	CGCG	3 cut(s)	314, 338, 524
BshFI	GGCC	6 cut(s)	221, 284, 302, 317, 605, 1066
BsiSI	CCGG	4 cut(s)	304, 401, 494, 1096
BslFI	GGGAC	4 cut(s)	25, 680, 1113, 1394
BslI	CCNNNNNNNGG	1 cut(s)	303
BsmAI	GTCTC	4 cut(s)	149, 830, 1300, 1501
BsmBI	CGTCTC	2 cut(s)	149, 830
BsmFI	GGGAC	4 cut(s)	25, 680, 1113, 1394
BsmI	GAATGC	2 cut(s)	580, 1155
BsnI	GGCC	6 cut(s)	221, 284, 302, 317, 605, 1066
Bsp1407I	TGTACA	1 cut(s)	1041
Bsp143I	GATC	6 cut(s)	24, 247, 729, 1255, 1397, 1553
Bsp19I	CCATGG	1 cut(s)	297
BspANI	GGCC	6 cut(s)	221, 284, 302, 317, 605, 1066
BspCNI	CTCAG	3 cut(s)	145, 925, 1024
BspFNI	CGCG	3 cut(s)	314, 338, 524
BspLI	GGNNCC	5 cut(s)	13, 14, 492, 1180, 1437
BspPI	GGATC	2 cut(s)	737, 1405
BsrBI	CCGCTC	1 cut(s)	638
BsrDI	GCAATG	1 cut(s)	879
BsrGI	TGTACA	1 cut(s)	1041
BsrI	ACTGG	1 cut(s)	1578
BssECI	CCNNGG	6 cut(s)	222, 297, 312, 380, 1096, 1273
BssMI	GATC	6 cut(s)	24, 247, 729, 1255, 1397, 1553
BssNI	GRCGYC	1 cut(s)	1628
BssT1I	CCWWGG	3 cut(s)	222, 297, 1273
Bst2UI	CCWGG	5 cut(s)	485, 911, 1382, 1440, 1450
Bst4CI	ACNGT	3 cut(s)	1131, 1526, 1600
Bst6I	CTCTTC	1 cut(s)	749
BstACI	GRCGYC	1 cut(s)	1628
BstAUI	TGTACA	1 cut(s)	1041
BstC8I	GCNNGC	4 cut(s)	309, 930, 1229, 1362
BstDEI	CTNAG	3 cut(s)	132, 933, 1011
BstDSI	CCRYGG	2 cut(s)	297, 312
BstF5I	GGATG	4 cut(s)	754, 958, 1149, 1377
BstFNI	CGCG	3 cut(s)	314, 338, 524
BstHHI	GCGC	1 cut(s)	524
BstKTI	GATC	6 cut(s)	27, 250, 732, 1258, 1400, 1556
BstMAI	GTCTC	4 cut(s)	149, 830, 1300, 1501
BstMBI	GATC	6 cut(s)	24, 247, 729, 1255, 1397, 1553
BstMWI	GCNNNNNNNGC	5 cut(s)	308, 440, 869, 925, 976
BstNI	CCWGG	5 cut(s)	485, 911, 1382, 1440, 1450
BstNSI	RCATGY	4 cut(s)	244, 256, 932, 1409
BstSCI	CCNGG	8 cut(s)	302, 399, 483, 909, 1095, 1380, 1438, 1448
BstSFI	CTRYAG	1 cut(s)	945
BstUI	CGCG	3 cut(s)	314, 338, 524
BstV1I	GCAGC	6 cut(s)	515, 789, 850, 1027, 1195, 1293
BsuRI	GGCC	6 cut(s)	221, 284, 302, 317, 605, 1066
BtgI	CCRYGG	2 cut(s)	297, 312
BtgZI	GCGATG	1 cut(s)	339
BtsCI	GGATG	4 cut(s)	754, 958, 1149, 1377
BtsIMutI	CAGTG	1 cut(s)	907
Cac8I	GCNNGC	4 cut(s)	309, 930, 1229, 1362
CaiI	CAGNNNCTG	1 cut(s)	1571
CfoI	GCGC	1 cut(s)	524
Cfr13I	GGNCC	2 cut(s)	12, 301
Cfr42I	CCGCGG	1 cut(s)	315
CseI	GACGC	2 cut(s)	1031, 1636
Csp6I	GTAC	3 cut(s)	269, 556, 1042
CspCI	CAANNNNNGTGG	2 cut(s)	1033, 1068
CviAII	CATG	9 cut(s)	241, 253, 298, 929, 1078, 1401, 1406, 1544, 1557
CviQI	GTAC	3 cut(s)	269, 556, 1042
DdeI	CTNAG	3 cut(s)	132, 933, 1011
DpnI	GATC	6 cut(s)	26, 249, 731, 1257, 1399, 1555
DpnII	GATC	6 cut(s)	24, 247, 729, 1255, 1397, 1553
DraIII	CACNNNGTG	1 cut(s)	1175
EaeI	YGGCCR	3 cut(s)	315, 603, 1064
Eam1104I	CTCTTC	1 cut(s)	749
EarI	CTCTTC	1 cut(s)	749
EciI	GGCGGA	2 cut(s)	112, 449
Eco130I	CCWWGG	3 cut(s)	222, 297, 1273
Eco47I	GGWCC	1 cut(s)	12
Eco57I	CTGAAG	2 cut(s)	1334, 1356
EcoO109I	RGGNCCY	1 cut(s)	12
EcoRII	CCWGG	5 cut(s)	483, 909, 1380, 1438, 1448
EcoT14I	CCWWGG	3 cut(s)	222, 297, 1273
EcoT22I	ATGCAT	1 cut(s)	1083
ErhI	CCWWGG	3 cut(s)	222, 297, 1273
Esp3I	CGTCTC	2 cut(s)	149, 830
FaeI	CATG	9 cut(s)	244, 256, 301, 932, 1081, 1404, 1409, 1547, 1560
FalI	AAGNNNNNCTT	2 cut(s)	1143, 1175
FaqI	GGGAC	4 cut(s)	25, 680, 1113, 1394
FatI	CATG	9 cut(s)	240, 252, 297, 928, 1077, 1400, 1405, 1543, 1556
FauI	CCCGC	1 cut(s)	1369
FauNDI	CATATG	1 cut(s)	462
FokI	GGATG	4 cut(s)	761, 965, 1156, 1364
FspBI	CTAG	2 cut(s)	1274, 1663
GlaI	GCGC	1 cut(s)	523
GsuI	CTGGAG	1 cut(s)	506
HaeIII	GGCC	6 cut(s)	221, 284, 302, 317, 605, 1066
HapII	CCGG	4 cut(s)	304, 401, 494, 1096
HgaI	GACGC	2 cut(s)	1031, 1636
HhaI	GCGC	1 cut(s)	524
Hin1I	GRCGYC	1 cut(s)	1628
Hin1II	CATG	9 cut(s)	244, 256, 301, 932, 1081, 1404, 1409, 1547, 1560
Hin6I	GCGC	1 cut(s)	522
HinP1I	GCGC	1 cut(s)	522
HincII	GTYRAC	1 cut(s)	820
HindII	GTYRAC	1 cut(s)	820
HindIII	AAGCTT	1 cut(s)	1482
HinfI	GANTC	7 cut(s)	119, 596, 668, 686, 999, 1385, 1568
HpaII	CCGG	4 cut(s)	304, 401, 494, 1096
HphI	GGTGA	7 cut(s)	283, 361, 490, 665, 670, 812, 1502
Hpy166II	GTNNAC	1 cut(s)	820
Hpy188I	TCNGA	8 cut(s)	135, 276, 381, 1344, 1353, 1390, 1521, 1567
Hpy188III	TCNNGA	3 cut(s)	28, 733, 1433
Hpy8I	GTNNAC	1 cut(s)	820
Hpy99I	CGWCG	2 cut(s)	197, 1025
HpyAV	CCTTC	6 cut(s)	346, 433, 508, 730, 1125, 1647
HpyCH4III	ACNGT	3 cut(s)	1131, 1526, 1600
HpyCH4IV	ACGT	1 cut(s)	1090
HpyCH4V	TGCA	5 cut(s)	503, 562, 578, 1081, 1560
HpyF10VI	GCNNNNNNNGC	5 cut(s)	308, 440, 869, 925, 976
HpyF3I	CTNAG	3 cut(s)	132, 933, 1011
HpySE526I	ACGT	1 cut(s)	1090
Hsp92I	GRCGYC	1 cut(s)	1628
Hsp92II	CATG	9 cut(s)	244, 256, 301, 932, 1081, 1404, 1409, 1547, 1560
HspAI	GCGC	1 cut(s)	522
KflI	GGGWCCC	1 cut(s)	12
KspI	CCGCGG	1 cut(s)	315
Kzo9I	GATC	6 cut(s)	24, 247, 729, 1255, 1397, 1553
LmnI	GCTCC	6 cut(s)	83, 457, 490, 635, 956, 1435
Lsp1109I	GCAGC	6 cut(s)	515, 789, 850, 1027, 1195, 1293
LweI	GCATC	2 cut(s)	1344, 1520
MaeI	CTAG	2 cut(s)	1274, 1663
MaeII	ACGT	1 cut(s)	1090
MaeIII	GTNAC	4 cut(s)	1234, 1548, 1580, 1603
MalI	GATC	6 cut(s)	26, 249, 731, 1257, 1399, 1555
MbiI	CCGCTC	1 cut(s)	638
MboI	GATC	6 cut(s)	24, 247, 729, 1255, 1397, 1553
MboII	GAAGA	7 cut(s)	31, 34, 43, 766, 1362, 1455, 1506
MfeI	CAATTG	1 cut(s)	215
MlsI	TGGCCA	1 cut(s)	1066
MluCI	AATT	9 cut(s)	53, 215, 372, 425, 661, 895, 982, 1037, 1505
MluI	ACGCGT	1 cut(s)	336
MluNI	TGGCCA	1 cut(s)	1066
MlyI	GAGTC	3 cut(s)	662, 695, 1562
MmeI	TCCRAC	1 cut(s)	1413
Mox20I	TGGCCA	1 cut(s)	1066
Mph1103I	ATGCAT	1 cut(s)	1083
MscI	TGGCCA	1 cut(s)	1066
MseI	TTAA	2 cut(s)	681, 888
MslI	CAYNNNNRTG	2 cut(s)	296, 1601
Msp20I	TGGCCA	1 cut(s)	1066
MspA1I	CMGCKG	1 cut(s)	314
MspI	CCGG	4 cut(s)	304, 401, 494, 1096
MspR9I	CCNGG	8 cut(s)	304, 401, 485, 911, 1097, 1382, 1440, 1450
MunI	CAATTG	1 cut(s)	215
Mva1269I	GAATGC	2 cut(s)	580, 1155
MvaI	CCWGG	5 cut(s)	485, 911, 1382, 1440, 1450
MvnI	CGCG	3 cut(s)	314, 338, 524
MwoI	GCNNNNNNNGC	5 cut(s)	308, 440, 869, 925, 976
NciI	CCSGG	3 cut(s)	304, 401, 1097
NcoI	CCATGG	1 cut(s)	297
NdeI	CATATG	1 cut(s)	462
NdeII	GATC	6 cut(s)	24, 247, 729, 1255, 1397, 1553
NlaIII	CATG	9 cut(s)	244, 256, 301, 932, 1081, 1404, 1409, 1547, 1560
NlaIV	GGNNCC	5 cut(s)	13, 14, 492, 1180, 1437
NmuCI	GTSAC	2 cut(s)	1580, 1603
NsiI	ATGCAT	1 cut(s)	1083
NspI	RCATGY	4 cut(s)	244, 256, 932, 1409
OliI	CACNNNNGTG	1 cut(s)	1601
PaeI	GCATGC	1 cut(s)	932
PciI	ACATGT	1 cut(s)	252
PcsI	WCGNNNNNNNCGW	2 cut(s)	123, 1239
PctI	GAATGC	2 cut(s)	580, 1155
PfeI	GAWTC	4 cut(s)	119, 596, 999, 1385
PfoI	TCCNGGA	2 cut(s)	909, 1380
PleI	GAGTC	3 cut(s)	662, 694, 1562
PpsI	GAGTC	3 cut(s)	662, 694, 1562
PpuMI	RGGWCCY	1 cut(s)	12
PscI	ACATGT	1 cut(s)	252
Psp5II	RGGWCCY	1 cut(s)	12
Psp6I	CCWGG	5 cut(s)	483, 909, 1380, 1438, 1448
PspGI	CCWGG	5 cut(s)	483, 909, 1380, 1438, 1448
PspN4I	GGNNCC	5 cut(s)	13, 14, 492, 1180, 1437
PspPI	GGNCC	2 cut(s)	12, 301
PspPPI	RGGWCCY	1 cut(s)	12
PstNI	CAGNNNCTG	1 cut(s)	1571
RsaI	GTAC	3 cut(s)	270, 557, 1043
RsaNI	GTAC	3 cut(s)	269, 556, 1042
RseI	CAYNNNNRTG	2 cut(s)	296, 1601
SacII	CCGCGG	1 cut(s)	315
SaqAI	TTAA	2 cut(s)	681, 888
Sau3AI	GATC	6 cut(s)	24, 247, 729, 1255, 1397, 1553
Sau96I	GGNCC	2 cut(s)	12, 301
SchI	GAGTC	3 cut(s)	662, 695, 1562
ScrFI	CCNGG	8 cut(s)	304, 401, 485, 911, 1097, 1382, 1440, 1450
SfaNI	GCATC	2 cut(s)	1344, 1520
SfcI	CTRYAG	1 cut(s)	945
Sfr303I	CCGCGG	1 cut(s)	315
SgrBI	CCGCGG	1 cut(s)	315
SinI	GGWCC	1 cut(s)	12
SmiMI	CAYNNNNRTG	2 cut(s)	296, 1601
SmlI	CTYRAG	1 cut(s)	1292
SmoI	CTYRAG	1 cut(s)	1292
SphI	GCATGC	1 cut(s)	932
Sse9I	AATT	9 cut(s)	53, 215, 372, 425, 661, 895, 982, 1037, 1505
SspI	AATATT	2 cut(s)	964, 1651
SspMI	CTAG	2 cut(s)	1274, 1663
StyD4I	CCNGG	8 cut(s)	302, 399, 483, 909, 1095, 1380, 1438, 1448
StyI	CCWWGG	3 cut(s)	222, 297, 1273
TaaI	ACNGT	3 cut(s)	1131, 1526, 1600
TaiI	ACGT	1 cut(s)	1093
TaqI	TCGA	4 cut(s)	246, 1020, 1134, 1318
TasI	AATT	9 cut(s)	53, 215, 372, 425, 661, 895, 982, 1037, 1505
TatI	WGTACW	1 cut(s)	1041
TauI	GCSGC	4 cut(s)	314, 317, 641, 1360
TfiI	GAWTC	4 cut(s)	119, 596, 999, 1385
Tru1I	TTAA	2 cut(s)	681, 888
Tru9I	TTAA	2 cut(s)	681, 888
TscAI	CASTG	1 cut(s)	907
TseFI	GTSAC	2 cut(s)	1580, 1603
TseI	GCWGC	6 cut(s)	503, 777, 863, 1015, 1208, 1281
Tsp45I	GTSAC	2 cut(s)	1580, 1603
TspDTI	ATGAA	3 cut(s)	954, 1260, 1437
TspGWI	ACGGA	2 cut(s)	181, 854
TspRI	CASTG	1 cut(s)	907
VpaK11BI	GGWCC	1 cut(s)	12
XapI	RAATTY	2 cut(s)	372, 982
XceI	RCATGY	4 cut(s)	244, 256, 932, 1409
XcmI	CCANNNNNNNNNTGG	2 cut(s)	214, 295
XmaJI	CCTAGG	1 cut(s)	1273
XspI	CTAG	2 cut(s)	1274, 1663
Zsp2I	ATGCAT	1 cut(s)	1083

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.