Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr7

Orthogroup ID

OG0004366

Physical Location & Seq

Genomic Coordinates Forward (+)

38929269 .. 38935073

Gene Structure 5805 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000034233

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1854 bp

ATGGGAACTCCAAAGAGGAAGAAGAAGCAGACCCCAGAGACCCAATTCCACTCTTCCCTCACTTTCTGCTCAAAGAACAAGGACTTAAGCAGCGCAATCTCGCTGTACGAATCCGCTGTTTCGCAGAATACGCGGCTCAACCAGCACCATTTTAACACCCTACTCTACCTCTGCTCTAACTCTGTCACTGATCCGTCCCTGAAGCAATTGGCCTTGGAATATGGCTTCCGCGTGTTTGATCACATGTCGTCGATCGAAGTCCTCCCCAACGAGGCCACGATCACCGCTGTTGCTCGGCTCGCTGCGGCGAATGGTGATGGTGATTATTCTTTTGAGCTGGTGAAGGGTATGGAGAAGTATAATGTATTGCCGAGGTTGCGCACTTGCGATCCGGCATTGTTTGGCTTTTGCGAGAAACTGGAGGCTGATAAGGCGTATGAGGTGGAAGAGTATATGAATAAGGTGGGAGTGAGTGTAGAAGAGCCTGAGATTGCAGCCTTATTAAAGGTGAGTGCAGAGACAGGAAGAGGGGAGAGGGTTTATGATTACTTGCACAAGTTGAGGAATGCTGTGAGGTGTGTTCATGAATCGACGGCCAAGATCATTGAGGATTGGTATCGTGATGGAAGGGCTAGTGAAGTGGGTGAGGTGAATTGGGACTCGGGTAGGGTCAAAGAGGCGGTTTTGAGGAATGGAGGAGGATGGCATGGGCAGGGGTGGGTTGGGAAGGGGGATTGGTCTGTGCAGAGAGCCAATGTGGATTCTGACAGCAGGTGTTGCTCCTGTGGTGAGCATTTGGTTTGTGTCGACATTGACTGTGCAGAGACAGATAGGTTTGCGCAGTCTGTTGCTGCTTTGGCAATGGAAAGGGAGGTTAAGTTGAATTTCAGTGAGTTTCAGGATTGGCTGGACAAACATGCTGATTATGAAGCTATTGTGGATGGAGCTAATATTGGGCTCTACCAGCAGAATTTTGCAGAAGGTGGATTCAGTCTTCCTCAGCTTGATGCTGTTGTGAAAGAATTGTACAATAGAAGTGGAGAGAATTGGCCACTTGTTGTCTTGCATAATAGACGTTTTCGGTCACTTGTGGAAAACCCTTCCCACAGAAAAGTGGTTGAGGAGTGGATGGATAAAGGCATTCTTTATACCACACCAAGTGGCTCAAATGATGACTGGTATTGGCTTTATGCTGCTGTGAAACTCAAGTGCTTGCTCGTTACAAATGATGAAATGCGAGATCATATATTTGAACTTCTAGGAAGCAGCTTCGTTCTTAAGTGGAAAGAGAGGCATCAAGTACGATATACTTTTGTTAAAGGCAATCTGAAACTTCAGACCCCACCCCCATATTCTTCAGTGATCCAGGAATCAGAAAGCGGATCATGGCATGTACCTGTAGCAGATGACAGCGATGAGGAGCCAGCGAGAACCTGGCTCTGCATTACCCGGCCAAGTGCCTCTAAAGCTTCTACTGGAGCTTTGCTATCTCAAAATGCGTTTCTGAATTCTTGCACATCTGAGTTTTTATGGGGCTCATATCTCGTGGAGATGGTTGTGGCTAATAGGAGGCTGGTCAGGAGCAGCGGGATCGCCTATTATAACAACGGCCTCATCTGTCTACAACACACCCCAACTTTCCCTGGTTTGACTTACCCACATCGGTTGATAGTCGGTAATTTAGAAAGAAGGAGAAGAGGGATTTCGGTTTTGCCCTTCGTCGTCGGTGAATTAGGGCCTGTCGCTGTTAATTTGGATCAGAGGGTCGGTTTTGAAGAGAAAGAGAGAGAAAGTTTTTGTGTGATTCGGTTTTTGAGTGGGTCTTTTGTTGTTGGTGGTTTTGAATCGGTATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000966 GO:0001682 GO:0003674 GO:0003824 GO:0004518 GO:0004519 GO:0004521 GO:0004526 GO:0004540 GO:0004549 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006396 GO:0006397 GO:0006399 GO:0006725 GO:0006807 GO:0008033 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0016074 GO:0016787 GO:0016788 GO:0016891 GO:0016893 GO:0034470 GO:0034471 GO:0034641 GO:0034660 GO:0043144 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0090501 GO:0090502 GO:0099116 GO:0140098 GO:0140101 GO:1901360

KEGG Pathways

Metabolic & Signaling

ko03013 map03013

Pfam Domains

Protein Families

PPR_long PRORP

Protein Analysis

618

Amino Acids

69.53

Weight (kDa)

5.82

Isoelectric Point (pI)

39.51

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_long	PF17177	5 - 212	2.2e-82	Pentacotripeptide-repeat region of PRORP
PRORP	PF16953	254 - 481	2.3e-57	Protein-only RNase P
RNase_Zc3h12a	PF11977	311 - 443	1.1e-07	Zc3h12a-like Ribonuclease NYN domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004366)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G16650 AT2G16650 AT4G21900 AT5G60430 AT5G60430 AT5G60430 AT5G60430
fragaria_vesca	FvH4_3g24550 FvH4_3g24550 FvH4_3g24550
malus_domestica	MD03G1141100.v1.1 MD11G1171700.v1.1
prunus_persica	Prupe.6G126500_v2.0.a1
pyrus_communis	pycom03g09600
rosa_chinensis	RchiOBHm_Chr5g0043991
rosa_laevigata	RLG00000034233 RLG00000034235
rosa_multiflora	Rmu_sc0001157.1_g000006
rosa_roxburghii	Rroxscaffold_1G00037010
rosa_rugosa	Rorug05G0209600 Rorug05G0209700 Rorug05G0209700 Rorug05G0209800 Rorug05G0209900 Rorug05G0210000 Rorug05G0210100.1 Rorug05G0210200
rosa_samantha	Rh5AG294100 Rh5BG302500 Rh5CG329700 Rh5DG311300
rosa_wichuraiana	Rw5G027270

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1602
AarI	CACCTGC	1 cut(s)	762
Acc16I	TGCGCA	2 cut(s)	380, 840
Acc36I	ACCTGC	1 cut(s)	762
AccI	GTMKAC	2 cut(s)	807, 1621
AccII	CGCG	2 cut(s)	133, 231
AciI	CCGC	8 cut(s)	114, 133, 229, 285, 305, 680, 1380, 1587
AclWI	GGATC	6 cut(s)	185, 383, 1357, 1390, 1598, 1764
AcoI	YGGCCR	3 cut(s)	594, 1049, 1451
AcsI	RAATTY	3 cut(s)	883, 970, 1507
AcuI	CTGAAG	3 cut(s)	221, 1319, 1341
AdeI	CACNNNGTG	1 cut(s)	1160
AfaI	GTAC	4 cut(s)	107, 1028, 1302, 1395
AfiI	CCNNNNNNNGG	1 cut(s)	271
AflII	CTTAAG	2 cut(s)	85, 1277
AflIII	ACRYGT	1 cut(s)	243
AgsI	TTSAA	4 cut(s)	883, 1253, 1775, 1844
AjnI	CCWGG	3 cut(s)	1365, 1433, 1642
AluBI	AGCT	7 cut(s)	337, 932, 947, 1003, 1269, 1469, 1481
AluI	AGCT	7 cut(s)	337, 932, 947, 1003, 1269, 1469, 1481
Alw26I	GTCTC	3 cut(s)	32, 512, 818
AlwI	GGATC	6 cut(s)	185, 383, 1357, 1390, 1598, 1764
Ama87I	CYCGRG	1 cut(s)	661
AoxI	GGCC	7 cut(s)	210, 273, 594, 1049, 1451, 1609, 1736
ApeKI	GCWGC	7 cut(s)	90, 302, 494, 851, 1193, 1266, 1584
ApoI	RAATTY	3 cut(s)	883, 970, 1507
AspLEI	GCGC	3 cut(s)	95, 381, 841
AspS9I	GGNCC	1 cut(s)	1736
AsuC2I	CCSGG	1 cut(s)	1450
AsuHPI	GGTGA	9 cut(s)	274, 326, 332, 352, 520, 656, 661, 800, 1739
AvaI	CYCGRG	1 cut(s)	661
BalI	TGGCCA	1 cut(s)	1051
BanII	GRGCYC	2 cut(s)	960, 1538
BauI	CACGAG	1 cut(s)	1544
BbsI	GAAGAC	1 cut(s)	986
BbvCI	CCTCAGC	1 cut(s)	999
BbvI	GCAGC	7 cut(s)	102, 289, 506, 838, 1180, 1278, 1596
BccI	CCATC	6 cut(s)	311, 617, 696, 935, 1123, 1546
BceAI	ACGGC	2 cut(s)	609, 1624
BcgI	CGANNNNNNTGC	2 cut(s)	1573, 1607
BciT130I	CCWGG	3 cut(s)	1367, 1435, 1644
BclI	TGATCA	1 cut(s)	238
BcnI	CCSGG	1 cut(s)	1450
BcoDI	GTCTC	3 cut(s)	32, 512, 818
BfaI	CTAG	2 cut(s)	633, 1259
BfmI	CTRYAG	1 cut(s)	1398
BfrI	CTTAAG	2 cut(s)	85, 1277
BfuAI	ACCTGC	1 cut(s)	762
BisI	GCNGC	9 cut(s)	91, 134, 303, 306, 495, 852, 1194, 1267, 1585
BlsI	GCNGC	9 cut(s)	92, 135, 304, 307, 496, 853, 1195, 1268, 1586
Bme1390I	CCNGG	4 cut(s)	1367, 1435, 1450, 1644
BmeT110I	CYCGRG	1 cut(s)	661
BmgT120I	GGNCC	1 cut(s)	1736
BmiI	GGNNCC	1 cut(s)	1422
BmrFI	CCNGG	4 cut(s)	1367, 1435, 1450, 1644
BmsI	GCATC	2 cut(s)	997, 1303
BpiI	GAAGAC	1 cut(s)	986
BpmI	CTGGAG	2 cut(s)	440, 1497
Bpu10I	CCTNAGC	1 cut(s)	999
BpuEI	CTTGAG	1 cut(s)	1190
BpuMI	CCSGG	1 cut(s)	1450
BsaBI	GATNNNNATC	1 cut(s)	615
BsaI	GGTCTC	1 cut(s)	32
BsaJI	CCNNGG	3 cut(s)	213, 371, 1642
BsaXI	ACNNNNNCTCC	4 cut(s)	459, 489, 863, 893
Bsc4I	CCNNNNNNNGG	1 cut(s)	271
Bse1I	ACTGG	3 cut(s)	423, 1181, 1480
Bse3DI	GCAATG	1 cut(s)	867
Bse8I	GATNNNNATC	1 cut(s)	615
BseBI	CCWGG	3 cut(s)	1367, 1435, 1644
BseDI	CCNNGG	3 cut(s)	213, 371, 1642
BseGI	GGATG	3 cut(s)	707, 946, 1134
BseJI	GATNNNNATC	1 cut(s)	615
BseLI	CCNNNNNNNGG	1 cut(s)	271
BseMI	GCAATG	1 cut(s)	867
BseMII	CTCAG	3 cut(s)	477, 1013, 1512
BseNI	ACTGG	3 cut(s)	423, 1181, 1480
BseRI	GAGGAG	3 cut(s)	711, 1136, 1433
BseXI	GCAGC	7 cut(s)	102, 289, 506, 838, 1180, 1278, 1596
BsgI	GTGCAG	3 cut(s)	534, 764, 840
Bsh1236I	CGCG	2 cut(s)	133, 231
Bsh1285I	CGRYCG	1 cut(s)	255
BshFI	GGCC	7 cut(s)	212, 275, 596, 1051, 1453, 1611, 1738
BsiEI	CGRYCG	1 cut(s)	255
BsiHKCI	CYCGRG	1 cut(s)	661
BsiSI	CCGG	2 cut(s)	392, 1450
BslFI	GGGAC	2 cut(s)	181, 671
BslI	CCNNNNNNNGG	1 cut(s)	271
BsmAI	GTCTC	3 cut(s)	32, 512, 818
BsmFI	GGGAC	2 cut(s)	181, 671
BsmI	GAATGC	2 cut(s)	571, 1140
BsnI	GGCC	7 cut(s)	212, 275, 596, 1051, 1453, 1611, 1738
Bso31I	GGTCTC	1 cut(s)	32
BsoBI	CYCGRG	1 cut(s)	661
Bsp1286I	GDGCHC	2 cut(s)	960, 1538
Bsp1407I	TGTACA	1 cut(s)	1026
BspACI	CCGC	8 cut(s)	114, 133, 229, 285, 305, 680, 1380, 1587
BspANI	GGCC	7 cut(s)	212, 275, 596, 1051, 1453, 1611, 1738
BspCNI	CTCAG	3 cut(s)	478, 1012, 1513
BspFNI	CGCG	2 cut(s)	133, 231
BspHI	TCATGA	1 cut(s)	583
BspLI	GGNNCC	1 cut(s)	1422
BspMI	ACCTGC	1 cut(s)	762
BspPI	GGATC	6 cut(s)	185, 383, 1357, 1390, 1598, 1764
BspQI	GCTCTTC	1 cut(s)	474
BspTI	CTTAAG	2 cut(s)	85, 1277
BspTNI	GGTCTC	1 cut(s)	32
BsrDI	GCAATG	1 cut(s)	867
BsrGI	TGTACA	1 cut(s)	1026
BsrI	ACTGG	3 cut(s)	423, 1181, 1480
BssECI	CCNNGG	3 cut(s)	213, 371, 1642
BssSI	CACGAG	1 cut(s)	1544
BssT1I	CCWWGG	1 cut(s)	213
Bst2BI	CACGAG	1 cut(s)	1544
Bst2UI	CCWGG	3 cut(s)	1367, 1435, 1644
Bst4CI	ACNGT	1 cut(s)	818
Bst6I	CTCTTC	6 cut(s)	58, 441, 474, 520, 1690, 1770
BstAFI	CTTAAG	2 cut(s)	85, 1277
BstAPI	GCANNNNNTGC	1 cut(s)	777
BstAUI	TGTACA	1 cut(s)	1026
BstC8I	GCNNGC	3 cut(s)	300, 1214, 1425
BstDEI	CTNAG	3 cut(s)	486, 999, 1521
BstF5I	GGATG	3 cut(s)	707, 946, 1134
BstFNI	CGCG	2 cut(s)	133, 231
BstHHI	GCGC	3 cut(s)	95, 381, 841
BstMAI	GTCTC	3 cut(s)	32, 512, 818
BstMCI	CGRYCG	1 cut(s)	255
BstMWI	GCNNNNNNNGC	9 cut(s)	130, 142, 299, 376, 431, 777, 857, 964, 1466
BstNI	CCWGG	3 cut(s)	1367, 1435, 1644
BstNSI	RCATGY	3 cut(s)	247, 920, 1394
BstSCI	CCNGG	4 cut(s)	1365, 1433, 1448, 1642
BstSFI	CTRYAG	1 cut(s)	1398
BstUI	CGCG	2 cut(s)	133, 231
BstV1I	GCAGC	7 cut(s)	102, 289, 506, 838, 1180, 1278, 1596
BstV2I	GAAGAC	1 cut(s)	986
BsuRI	GGCC	7 cut(s)	212, 275, 596, 1051, 1453, 1611, 1738
BtgZI	GCGATG	1 cut(s)	1428
BtsCI	GGATG	3 cut(s)	707, 946, 1134
BtsIMutI	CAGTG	3 cut(s)	186, 895, 1365
BveI	ACCTGC	1 cut(s)	762
Cac8I	GCNNGC	3 cut(s)	300, 1214, 1425
CciI	TCATGA	1 cut(s)	583
CfoI	GCGC	3 cut(s)	95, 381, 841
Cfr13I	GGNCC	1 cut(s)	1736
Csp6I	GTAC	4 cut(s)	106, 1027, 1301, 1394
CspCI	CAANNNNNGTGG	4 cut(s)	1018, 1053, 1647, 1682
CviAII	CATG	6 cut(s)	244, 584, 707, 917, 1386, 1391
CviQI	GTAC	4 cut(s)	106, 1027, 1301, 1394
DdeI	CTNAG	3 cut(s)	486, 999, 1521
DraIII	CACNNNGTG	1 cut(s)	1160
EaeI	YGGCCR	3 cut(s)	594, 1049, 1451
Eam1104I	CTCTTC	6 cut(s)	58, 441, 474, 520, 1690, 1770
EarI	CTCTTC	6 cut(s)	58, 441, 474, 520, 1690, 1770
Eco130I	CCWWGG	1 cut(s)	213
Eco24I	GRGCYC	2 cut(s)	960, 1538
Eco31I	GGTCTC	1 cut(s)	32
Eco57I	CTGAAG	3 cut(s)	221, 1319, 1341
Eco88I	CYCGRG	1 cut(s)	661
EcoO109I	RGGNCCY	1 cut(s)	1736
EcoRI	GAATTC	1 cut(s)	1507
EcoRII	CCWGG	3 cut(s)	1365, 1433, 1642
EcoT14I	CCWWGG	1 cut(s)	213
EcoT38I	GRGCYC	2 cut(s)	960, 1538
ErhI	CCWWGG	1 cut(s)	213
FaeI	CATG	6 cut(s)	247, 587, 710, 920, 1389, 1394
FalI	AAGNNNNNCTT	2 cut(s)	1128, 1160
FaqI	GGGAC	2 cut(s)	181, 671
FatI	CATG	6 cut(s)	243, 583, 706, 916, 1385, 1390
FauI	CCCGC	1 cut(s)	1580
FbaI	TGATCA	1 cut(s)	238
FblI	GTMKAC	2 cut(s)	807, 1621
Fnu4HI	GCNGC	9 cut(s)	91, 134, 303, 306, 495, 852, 1194, 1267, 1585
FokI	GGATG	3 cut(s)	714, 953, 1141
FriOI	GRGCYC	2 cut(s)	960, 1538
Fsp4HI	GCNGC	9 cut(s)	91, 134, 303, 306, 495, 852, 1194, 1267, 1585
FspBI	CTAG	2 cut(s)	633, 1259
FspI	TGCGCA	2 cut(s)	380, 840
GlaI	GCGC	3 cut(s)	94, 380, 840
GluI	GCNGC	9 cut(s)	91, 134, 303, 306, 495, 852, 1194, 1267, 1585
GsuI	CTGGAG	2 cut(s)	440, 1497
HaeIII	GGCC	7 cut(s)	212, 275, 596, 1051, 1453, 1611, 1738
HapII	CCGG	2 cut(s)	392, 1450
HhaI	GCGC	3 cut(s)	95, 381, 841
Hin1II	CATG	6 cut(s)	247, 587, 710, 920, 1389, 1394
Hin6I	GCGC	3 cut(s)	93, 379, 839
HinP1I	GCGC	3 cut(s)	93, 379, 839
HincII	GTYRAC	1 cut(s)	808
HindII	GTYRAC	1 cut(s)	808
HindIII	AAGCTT	1 cut(s)	1467
HinfI	GANTC	8 cut(s)	110, 587, 659, 761, 987, 1370, 1804, 1844
HpaII	CCGG	2 cut(s)	392, 1450
HphI	GGTGA	9 cut(s)	274, 326, 332, 352, 520, 656, 661, 800, 1739
Hpy166II	GTNNAC	2 cut(s)	808, 1622
Hpy188I	TCNGA	7 cut(s)	766, 1329, 1338, 1375, 1506, 1522, 1761
Hpy188III	TCNNGA	4 cut(s)	584, 620, 899, 1579
Hpy8I	GTNNAC	2 cut(s)	808, 1622
Hpy99I	CGWCG	4 cut(s)	253, 595, 1724, 1727
HpyAV	CCTTC	7 cut(s)	337, 621, 721, 974, 1110, 1683, 1726
HpyCH4III	ACNGT	1 cut(s)	818
HpyCH4IV	ACGT	1 cut(s)	1075
HpyCH4V	TGCA	9 cut(s)	494, 515, 553, 745, 821, 977, 1066, 1443, 1515
HpyF10VI	GCNNNNNNNGC	9 cut(s)	130, 142, 299, 376, 431, 777, 857, 964, 1466
HpyF3I	CTNAG	3 cut(s)	486, 999, 1521
HpySE526I	ACGT	1 cut(s)	1075
Hsp92II	CATG	6 cut(s)	247, 587, 710, 920, 1389, 1394
HspAI	GCGC	3 cut(s)	93, 379, 839
Ksp22I	TGATCA	1 cut(s)	238
LguI	GCTCTTC	1 cut(s)	474
LmnI	GCTCC	5 cut(s)	785, 944, 1420, 1478, 1581
Lsp1109I	GCAGC	7 cut(s)	102, 289, 506, 838, 1180, 1278, 1596
LweI	GCATC	2 cut(s)	997, 1303
MaeI	CTAG	2 cut(s)	633, 1259
MaeII	ACGT	1 cut(s)	1075
MaeIII	GTNAC	3 cut(s)	184, 1083, 1219
MfeI	CAATTG	1 cut(s)	206
MhlI	GDGCHC	2 cut(s)	960, 1538
MlsI	TGGCCA	1 cut(s)	1051
MluNI	TGGCCA	1 cut(s)	1051
MlyI	GAGTC	1 cut(s)	653
Mox20I	TGGCCA	1 cut(s)	1051
MscI	TGGCCA	1 cut(s)	1051
MseI	TTAA	7 cut(s)	86, 153, 503, 876, 1278, 1317, 1749
Msp20I	TGGCCA	1 cut(s)	1051
MspA1I	CMGCKG	3 cut(s)	116, 287, 1587
MspCI	CTTAAG	2 cut(s)	85, 1277
MspI	CCGG	2 cut(s)	392, 1450
MspR9I	CCNGG	4 cut(s)	1367, 1435, 1450, 1644
MunI	CAATTG	1 cut(s)	206
Mva1269I	GAATGC	2 cut(s)	571, 1140
MvaI	CCWGG	3 cut(s)	1367, 1435, 1644
MvnI	CGCG	2 cut(s)	133, 231
MwoI	GCNNNNNNNGC	9 cut(s)	130, 142, 299, 376, 431, 777, 857, 964, 1466
NciI	CCSGG	1 cut(s)	1450
NlaIII	CATG	6 cut(s)	247, 587, 710, 920, 1389, 1394
NlaIV	GGNNCC	1 cut(s)	1422
NmeAIII	GCCGAG	2 cut(s)	274, 396
NmuCI	GTSAC	2 cut(s)	184, 1083
NsbI	TGCGCA	2 cut(s)	380, 840
NspI	RCATGY	3 cut(s)	247, 920, 1394
PagI	TCATGA	1 cut(s)	583
PaqCI	CACCTGC	1 cut(s)	762
PciI	ACATGT	1 cut(s)	243
PciSI	GCTCTTC	1 cut(s)	474
PctI	GAATGC	2 cut(s)	571, 1140
PfeI	GAWTC	7 cut(s)	110, 587, 761, 987, 1370, 1804, 1844
PfoI	TCCNGGA	1 cut(s)	1365
PkrI	GCNGC	9 cut(s)	92, 135, 304, 307, 496, 853, 1195, 1268, 1586
Ple19I	CGATCG	1 cut(s)	255
PleI	GAGTC	1 cut(s)	653
PpsI	GAGTC	1 cut(s)	653
PscI	ACATGT	1 cut(s)	243
PsiI	TTATAA	1 cut(s)	1602
Psp6I	CCWGG	3 cut(s)	1365, 1433, 1642
PspGI	CCWGG	3 cut(s)	1365, 1433, 1642
PspN4I	GGNNCC	1 cut(s)	1422
PspPI	GGNCC	1 cut(s)	1736
PvuI	CGATCG	1 cut(s)	255
RsaI	GTAC	4 cut(s)	107, 1028, 1302, 1395
RsaNI	GTAC	4 cut(s)	106, 1027, 1301, 1394
SalI	GTCGAC	1 cut(s)	806
SapI	GCTCTTC	1 cut(s)	474
SaqAI	TTAA	7 cut(s)	86, 153, 503, 876, 1278, 1317, 1749
SatI	GCNGC	9 cut(s)	91, 134, 303, 306, 495, 852, 1194, 1267, 1585
Sau96I	GGNCC	1 cut(s)	1736
SchI	GAGTC	1 cut(s)	653
ScrFI	CCNGG	4 cut(s)	1367, 1435, 1450, 1644
SduI	GDGCHC	2 cut(s)	960, 1538
SfaNI	GCATC	2 cut(s)	997, 1303
SfcI	CTRYAG	1 cut(s)	1398
SmlI	CTYRAG	3 cut(s)	85, 1205, 1277
SmoI	CTYRAG	3 cut(s)	85, 1205, 1277
SsiI	CCGC	8 cut(s)	114, 133, 229, 285, 305, 680, 1380, 1587
SspI	AATATT	1 cut(s)	952
SspMI	CTAG	2 cut(s)	633, 1259
StyD4I	CCNGG	4 cut(s)	1365, 1433, 1448, 1642
StyI	CCWWGG	1 cut(s)	213
TaaI	ACNGT	1 cut(s)	818
TaiI	ACGT	1 cut(s)	1078
TaqI	TCGA	4 cut(s)	251, 255, 590, 807
TaqII	GACCGA	1 cut(s)	1071
TatI	WGTACW	1 cut(s)	1026
TauI	GCSGC	2 cut(s)	136, 308
TfiI	GAWTC	7 cut(s)	110, 587, 761, 987, 1370, 1804, 1844
Tru1I	TTAA	7 cut(s)	86, 153, 503, 876, 1278, 1317, 1749
Tru9I	TTAA	7 cut(s)	86, 153, 503, 876, 1278, 1317, 1749
TscAI	CASTG	3 cut(s)	193, 895, 1365
TseFI	GTSAC	2 cut(s)	184, 1083
TseI	GCWGC	7 cut(s)	90, 302, 494, 851, 1193, 1266, 1584
Tsp45I	GTSAC	2 cut(s)	184, 1083
TspDTI	ATGAA	5 cut(s)	470, 572, 600, 942, 1245
TspGWI	ACGGA	1 cut(s)	183
TspRI	CASTG	3 cut(s)	193, 895, 1365
Vha464I	CTTAAG	2 cut(s)	85, 1277
XapI	RAATTY	3 cut(s)	883, 970, 1507
XceI	RCATGY	3 cut(s)	247, 920, 1394
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1431
XmiI	GTMKAC	2 cut(s)	807, 1621
XspI	CTAG	2 cut(s)	633, 1259

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.