proteinaceous RNase P
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G16650 AT2G16650 AT4G21900 AT5G60430 AT5G60430 AT5G60430 AT5G60430 |
| fragaria_vesca | FvH4_3g24550 FvH4_3g24550 FvH4_3g24550 |
| malus_domestica | MD03G1141100.v1.1 MD11G1171700.v1.1 |
| prunus_persica | Prupe.6G126500_v2.0.a1 |
| pyrus_communis | pycom03g09600 |
| rosa_chinensis | RchiOBHm_Chr5g0043991 |
| rosa_laevigata | RLG00000034233 RLG00000034235 |
| rosa_multiflora | Rmu_sc0001157.1_g000006 |
| rosa_roxburghii | Rroxscaffold_1G00037010 |
| rosa_rugosa | Rorug05G0209600 Rorug05G0209700 Rorug05G0209700 Rorug05G0209800 Rorug05G0209900 Rorug05G0210000 Rorug05G0210100.1 Rorug05G0210200 |
| rosa_samantha | Rh5AG294100 Rh5BG302500 Rh5CG329700 Rh5DG311300 |
| rosa_wichuraiana | Rw5G027270 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 426 |
| AciI | CCGC | 1 cut(s) | 409 |
| AcoI | YGGCCR | 1 cut(s) | 274 |
| AfaI | GTAC | 1 cut(s) | 87 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 328 |
| AgsI | TTSAA | 1 cut(s) | 227 |
| AluBI | AGCT | 1 cut(s) | 379 |
| AluI | AGCT | 1 cut(s) | 379 |
| Alw21I | GWGCWC | 1 cut(s) | 30 |
| Alw26I | GTCTC | 1 cut(s) | 58 |
| AoxI | GGCC | 1 cut(s) | 274 |
| AsuC2I | CCSGG | 1 cut(s) | 136 |
| AsuHPI | GGTGA | 2 cut(s) | 56, 356 |
| AsuII | TTCGAA | 1 cut(s) | 100 |
| BaeGI | GKGCMC | 1 cut(s) | 322 |
| BalI | TGGCCA | 1 cut(s) | 276 |
| Bbv12I | GWGCWC | 1 cut(s) | 30 |
| BccI | CCATC | 2 cut(s) | 322, 413 |
| BcnI | CCSGG | 1 cut(s) | 136 |
| BcoDI | GTCTC | 1 cut(s) | 58 |
| BfuAI | ACCTGC | 1 cut(s) | 426 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 136 |
| Bme1390I | CCNGG | 1 cut(s) | 136 |
| BmrFI | CCNGG | 1 cut(s) | 136 |
| BmsI | GCATC | 2 cut(s) | 208, 321 |
| BpmI | CTGGAG | 1 cut(s) | 234 |
| Bpu14I | TTCGAA | 1 cut(s) | 100 |
| BpuEI | CTTGAG | 1 cut(s) | 380 |
| BpuMI | CCSGG | 1 cut(s) | 136 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 328 |
| BseGI | GGATG | 2 cut(s) | 309, 405 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 328 |
| BseRI | GAGGAG | 2 cut(s) | 194, 197 |
| BseSI | GKGCMC | 1 cut(s) | 322 |
| BshFI | GGCC | 1 cut(s) | 276 |
| BsiHKAI | GWGCWC | 1 cut(s) | 30 |
| BsiSI | CCGG | 1 cut(s) | 135 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 328 |
| BsmAI | GTCTC | 1 cut(s) | 58 |
| BsnI | GGCC | 1 cut(s) | 276 |
| Bsp119I | TTCGAA | 1 cut(s) | 100 |
| Bsp1286I | GDGCHC | 2 cut(s) | 30, 322 |
| Bsp143I | GATC | 1 cut(s) | 205 |
| BspACI | CCGC | 1 cut(s) | 409 |
| BspANI | GGCC | 1 cut(s) | 276 |
| BspMI | ACCTGC | 1 cut(s) | 426 |
| BspT104I | TTCGAA | 1 cut(s) | 100 |
| BssMI | GATC | 1 cut(s) | 205 |
| Bst4CI | ACNGT | 3 cut(s) | 44, 69, 249 |
| BstBI | TTCGAA | 1 cut(s) | 100 |
| BstC8I | GCNNGC | 1 cut(s) | 132 |
| BstF5I | GGATG | 2 cut(s) | 309, 405 |
| BstKTI | GATC | 1 cut(s) | 208 |
| BstMAI | GTCTC | 1 cut(s) | 58 |
| BstMBI | GATC | 1 cut(s) | 205 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 136, 218 |
| BstSCI | CCNGG | 1 cut(s) | 134 |
| BstSLI | GKGCMC | 1 cut(s) | 322 |
| BsuRI | GGCC | 1 cut(s) | 276 |
| BtsCI | GGATG | 2 cut(s) | 309, 405 |
| BtsIMutI | CAGTG | 1 cut(s) | 322 |
| BveI | ACCTGC | 1 cut(s) | 426 |
| Cac8I | GCNNGC | 1 cut(s) | 132 |
| Csp6I | GTAC | 1 cut(s) | 86 |
| CviJI | RGCY | 6 cut(s) | 7, 130, 276, 350, 379, 432 |
| CviKI_1 | RGCY | 6 cut(s) | 7, 130, 276, 350, 379, 432 |
| CviQI | GTAC | 1 cut(s) | 86 |
| DpnI | GATC | 1 cut(s) | 207 |
| DpnII | GATC | 1 cut(s) | 205 |
| EaeI | YGGCCR | 1 cut(s) | 274 |
| EciI | GGCGGA | 1 cut(s) | 398 |
| FaiI | YATR | 9 cut(s) | 61, 90, 92, 141, 156, 191, 252, 260, 371 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 383, 415 |
| FokI | GGATG | 2 cut(s) | 316, 392 |
| GsuI | CTGGAG | 1 cut(s) | 234 |
| HaeIII | GGCC | 1 cut(s) | 276 |
| HapII | CCGG | 1 cut(s) | 135 |
| HincII | GTYRAC | 1 cut(s) | 118 |
| HindII | GTYRAC | 1 cut(s) | 118 |
| HpaII | CCGG | 1 cut(s) | 135 |
| HphI | GGTGA | 2 cut(s) | 56, 356 |
| Hpy166II | GTNNAC | 1 cut(s) | 118 |
| Hpy188III | TCNNGA | 2 cut(s) | 167, 383 |
| Hpy8I | GTNNAC | 1 cut(s) | 118 |
| HpyCH4III | ACNGT | 3 cut(s) | 44, 69, 249 |
| HpyCH4V | TGCA | 3 cut(s) | 73, 154, 176 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 136, 218 |
| Kzo9I | GATC | 1 cut(s) | 205 |
| LpnPI | CCDG | 9 cut(s) | 140, 144, 148, 152, 198, 322, 336, 431, 435 |
| LweI | GCATC | 2 cut(s) | 208, 321 |
| MalI | GATC | 1 cut(s) | 207 |
| MboI | GATC | 1 cut(s) | 205 |
| MboII | GAAGA | 2 cut(s) | 254, 403 |
| MhlI | GDGCHC | 2 cut(s) | 30, 322 |
| MlsI | TGGCCA | 1 cut(s) | 276 |
| MluCI | AATT | 2 cut(s) | 255, 295 |
| MluNI | TGGCCA | 1 cut(s) | 276 |
| MmeI | TCCRAC | 1 cut(s) | 318 |
| MnlI | CCTC | 6 cut(s) | 16, 172, 175, 178, 334, 340 |
| Mox20I | TGGCCA | 1 cut(s) | 276 |
| MscI | TGGCCA | 1 cut(s) | 276 |
| MslI | CAYNNNNRTG | 1 cut(s) | 159 |
| Msp20I | TGGCCA | 1 cut(s) | 276 |
| MspI | CCGG | 1 cut(s) | 135 |
| MspR9I | CCNGG | 1 cut(s) | 136 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 136, 218 |
| NciI | CCSGG | 1 cut(s) | 136 |
| NdeII | GATC | 1 cut(s) | 205 |
| NspV | TTCGAA | 1 cut(s) | 100 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 106 |
| RsaI | GTAC | 1 cut(s) | 87 |
| RsaNI | GTAC | 1 cut(s) | 86 |
| RseI | CAYNNNNRTG | 1 cut(s) | 159 |
| Sau3AI | GATC | 1 cut(s) | 205 |
| ScrFI | CCNGG | 1 cut(s) | 136 |
| SduI | GDGCHC | 2 cut(s) | 30, 322 |
| SetI | ASST | 3 cut(s) | 27, 381, 420 |
| SfaNI | GCATC | 2 cut(s) | 208, 321 |
| SfuI | TTCGAA | 1 cut(s) | 100 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 159 |
| SmlI | CTYRAG | 1 cut(s) | 359 |
| SmoI | CTYRAG | 1 cut(s) | 359 |
| Sse9I | AATT | 2 cut(s) | 255, 295 |
| SsiI | CCGC | 1 cut(s) | 409 |
| SspI | AATATT | 1 cut(s) | 105 |
| StyD4I | CCNGG | 1 cut(s) | 134 |
| TaaI | ACNGT | 3 cut(s) | 44, 69, 249 |
| TaqI | TCGA | 1 cut(s) | 100 |
| TasI | AATT | 2 cut(s) | 255, 295 |
| TscAI | CASTG | 1 cut(s) | 322 |
| TspDTI | ATGAA | 2 cut(s) | 267, 386 |
| TspRI | CASTG | 1 cut(s) | 322 |