LYAR-type C2HC zinc finger
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G19385 |
| fragaria_vesca | FvH4_1g08060 |
| malus_domestica | MD02G1085300.v1.1 MD15G1212400.v1.1 |
| prunus_persica | Prupe.7G204300_v2.0.a1 Prupe.7G204300_v2.0.a1 |
| pyrus_communis | pycom02g06810 pycom15g18870 |
| rosa_chinensis | RchiOBHm_Chr2g0094111 |
| rosa_laevigata | RLG00000016456 |
| rosa_multiflora | Rmu_sc0026373.1_g000002 Rmu_ssc0000149.1_g000002 |
| rosa_roxburghii | Rroxscaffold_2G00147470 |
| rosa_rugosa | Rorug02G0041000 |
| rosa_samantha | Rh2AG088600 Rh2BG088700 Rh2CG091100 Rh2DG087700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 217 |
| Acc36I | ACCTGC | 2 cut(s) | 217, 487 |
| AciI | CCGC | 1 cut(s) | 341 |
| AcsI | RAATTY | 1 cut(s) | 769 |
| AcuI | CTGAAG | 3 cut(s) | 59, 177, 710 |
| AflII | CTTAAG | 1 cut(s) | 743 |
| AgsI | TTSAA | 4 cut(s) | 14, 67, 652, 676 |
| AluBI | AGCT | 8 cut(s) | 161, 197, 368, 532, 697, 742, 754, 777 |
| AluI | AGCT | 8 cut(s) | 161, 197, 368, 532, 697, 742, 754, 777 |
| Alw21I | GWGCWC | 1 cut(s) | 779 |
| Alw26I | GTCTC | 3 cut(s) | 63, 530, 723 |
| AoxI | GGCC | 1 cut(s) | 724 |
| ApoI | RAATTY | 1 cut(s) | 769 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 41, 73, 170, 202 |
| AseI | ATTAAT | 1 cut(s) | 255 |
| AspS9I | GGNCC | 3 cut(s) | 52, 173, 604 |
| AsuHPI | GGTGA | 1 cut(s) | 778 |
| AvaII | GGWCC | 3 cut(s) | 52, 173, 604 |
| AxyI | CCTNAGG | 1 cut(s) | 487 |
| BanII | GRGCYC | 1 cut(s) | 779 |
| BbsI | GAAGAC | 1 cut(s) | 27 |
| Bbv12I | GWGCWC | 1 cut(s) | 779 |
| BccI | CCATC | 3 cut(s) | 338, 419, 788 |
| BclI | TGATCA | 1 cut(s) | 636 |
| BcoDI | GTCTC | 3 cut(s) | 63, 530, 723 |
| BfaI | CTAG | 4 cut(s) | 315, 384, 533, 755 |
| BfrI | CTTAAG | 1 cut(s) | 743 |
| BfuAI | ACCTGC | 2 cut(s) | 217, 487 |
| Bme18I | GGWCC | 3 cut(s) | 52, 173, 604 |
| BmgT120I | GGNCC | 3 cut(s) | 52, 173, 604 |
| BmiI | GGNNCC | 1 cut(s) | 54 |
| BmsI | GCATC | 2 cut(s) | 105, 520 |
| BpiI | GAAGAC | 1 cut(s) | 27 |
| BpmI | CTGGAG | 1 cut(s) | 763 |
| Bsa29I | ATCGAT | 1 cut(s) | 99 |
| BsaJI | CCNNGG | 2 cut(s) | 281, 358 |
| Bse21I | CCTNAGG | 1 cut(s) | 487 |
| BseCI | ATCGAT | 1 cut(s) | 99 |
| BseDI | CCNNGG | 2 cut(s) | 281, 358 |
| BseGI | GGATG | 4 cut(s) | 349, 430, 511, 550 |
| BseMII | CTCAG | 4 cut(s) | 153, 501, 507, 729 |
| BseRI | GAGGAG | 1 cut(s) | 475 |
| BsgI | GTGCAG | 1 cut(s) | 94 |
| BshFI | GGCC | 1 cut(s) | 726 |
| BshVI | ATCGAT | 1 cut(s) | 99 |
| BsiHKAI | GWGCWC | 1 cut(s) | 779 |
| BslFI | GGGAC | 1 cut(s) | 38 |
| BsmAI | GTCTC | 3 cut(s) | 63, 530, 723 |
| BsmBI | CGTCTC | 1 cut(s) | 63 |
| BsmFI | GGGAC | 1 cut(s) | 38 |
| BsnI | GGCC | 1 cut(s) | 726 |
| Bsp1286I | GDGCHC | 1 cut(s) | 779 |
| Bsp143I | GATC | 2 cut(s) | 580, 636 |
| Bsp19I | CCATGG | 1 cut(s) | 281 |
| BspACI | CCGC | 1 cut(s) | 341 |
| BspANI | GGCC | 1 cut(s) | 726 |
| BspCNI | CTCAG | 4 cut(s) | 154, 500, 508, 730 |
| BspDI | ATCGAT | 1 cut(s) | 99 |
| BspLI | GGNNCC | 1 cut(s) | 54 |
| BspMI | ACCTGC | 2 cut(s) | 217, 487 |
| BspTI | CTTAAG | 1 cut(s) | 743 |
| BssECI | CCNNGG | 2 cut(s) | 281, 358 |
| BssMI | GATC | 2 cut(s) | 580, 636 |
| BssT1I | CCWWGG | 1 cut(s) | 281 |
| Bst4CI | ACNGT | 3 cut(s) | 26, 130, 790 |
| BstAFI | CTTAAG | 1 cut(s) | 743 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 328 |
| BstC8I | GCNNGC | 2 cut(s) | 320, 333 |
| BstDEI | CTNAG | 5 cut(s) | 162, 231, 487, 516, 738 |
| BstDSI | CCRYGG | 1 cut(s) | 281 |
| BstF5I | GGATG | 4 cut(s) | 349, 430, 511, 550 |
| BstKTI | GATC | 2 cut(s) | 583, 639 |
| BstMAI | GTCTC | 3 cut(s) | 63, 530, 723 |
| BstMBI | GATC | 2 cut(s) | 580, 636 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 328, 380 |
| BstV2I | GAAGAC | 1 cut(s) | 27 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 344, 412 |
| Bsu15I | ATCGAT | 1 cut(s) | 99 |
| Bsu36I | CCTNAGG | 1 cut(s) | 487 |
| BsuRI | GGCC | 1 cut(s) | 726 |
| BsuTUI | ATCGAT | 1 cut(s) | 99 |
| BtgI | CCRYGG | 1 cut(s) | 281 |
| BtsCI | GGATG | 4 cut(s) | 349, 430, 511, 550 |
| BveI | ACCTGC | 2 cut(s) | 217, 487 |
| Cac8I | GCNNGC | 2 cut(s) | 320, 333 |
| Cfr13I | GGNCC | 3 cut(s) | 52, 173, 604 |
| ClaI | ATCGAT | 1 cut(s) | 99 |
| CseI | GACGC | 1 cut(s) | 429 |
| CviAII | CATG | 4 cut(s) | 282, 338, 380, 608 |
| DdeI | CTNAG | 5 cut(s) | 162, 231, 487, 516, 738 |
| DpnI | GATC | 2 cut(s) | 582, 638 |
| DpnII | GATC | 2 cut(s) | 580, 636 |
| Ecl136II | GAGCTC | 1 cut(s) | 777 |
| Eco130I | CCWWGG | 1 cut(s) | 281 |
| Eco24I | GRGCYC | 1 cut(s) | 779 |
| Eco32I | GATATC | 1 cut(s) | 278 |
| Eco47I | GGWCC | 3 cut(s) | 52, 173, 604 |
| Eco53kI | GAGCTC | 1 cut(s) | 777 |
| Eco57I | CTGAAG | 3 cut(s) | 59, 177, 710 |
| Eco81I | CCTNAGG | 1 cut(s) | 487 |
| EcoICRI | GAGCTC | 1 cut(s) | 777 |
| EcoO109I | RGGNCCY | 1 cut(s) | 52 |
| EcoRV | GATATC | 1 cut(s) | 278 |
| EcoT14I | CCWWGG | 1 cut(s) | 281 |
| EcoT22I | ATGCAT | 1 cut(s) | 152 |
| EcoT38I | GRGCYC | 1 cut(s) | 779 |
| ErhI | CCWWGG | 1 cut(s) | 281 |
| Esp3I | CGTCTC | 1 cut(s) | 63 |
| FaeI | CATG | 4 cut(s) | 285, 341, 383, 611 |
| FaiI | YATR | 8 cut(s) | 141, 171, 283, 298, 339, 381, 609, 804 |
| FaqI | GGGAC | 1 cut(s) | 38 |
| FatI | CATG | 4 cut(s) | 281, 337, 379, 607 |
| FbaI | TGATCA | 1 cut(s) | 636 |
| FokI | GGATG | 4 cut(s) | 356, 437, 498, 557 |
| FriOI | GRGCYC | 1 cut(s) | 779 |
| FspBI | CTAG | 4 cut(s) | 315, 384, 533, 755 |
| GsuI | CTGGAG | 1 cut(s) | 763 |
| HaeIII | GGCC | 1 cut(s) | 726 |
| HgaI | GACGC | 1 cut(s) | 429 |
| Hin1II | CATG | 4 cut(s) | 285, 341, 383, 611 |
| HinfI | GANTC | 6 cut(s) | 34, 452, 506, 707, 719, 783 |
| HphI | GGTGA | 1 cut(s) | 778 |
| Hpy188I | TCNGA | 3 cut(s) | 39, 457, 739 |
| Hpy188III | TCNNGA | 4 cut(s) | 67, 515, 704, 780 |
| HpyAV | CCTTC | 2 cut(s) | 385, 551 |
| HpyCH4III | ACNGT | 3 cut(s) | 26, 130, 790 |
| HpyCH4V | TGCA | 6 cut(s) | 75, 96, 133, 150, 212, 291 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 328, 380 |
| HpyF3I | CTNAG | 5 cut(s) | 162, 231, 487, 516, 738 |
| Hsp92II | CATG | 4 cut(s) | 285, 341, 383, 611 |
| Ksp22I | TGATCA | 1 cut(s) | 636 |
| Kzo9I | GATC | 2 cut(s) | 580, 636 |
| LmnI | GCTCC | 1 cut(s) | 782 |
| LweI | GCATC | 2 cut(s) | 105, 520 |
| MaeI | CTAG | 4 cut(s) | 315, 384, 533, 755 |
| MaeIII | GTNAC | 1 cut(s) | 299 |
| MalI | GATC | 2 cut(s) | 582, 638 |
| MboI | GATC | 2 cut(s) | 580, 636 |
| MfeI | CAATTG | 1 cut(s) | 622 |
| MhlI | GDGCHC | 1 cut(s) | 779 |
| MluCI | AATT | 2 cut(s) | 622, 769 |
| MlyI | GAGTC | 1 cut(s) | 43 |
| MnlI | CCTC | 3 cut(s) | 353, 493, 496 |
| Mph1103I | ATGCAT | 1 cut(s) | 152 |
| MseI | TTAA | 2 cut(s) | 255, 744 |
| MslI | CAYNNNNRTG | 1 cut(s) | 342 |
| MspCI | CTTAAG | 1 cut(s) | 743 |
| MunI | CAATTG | 1 cut(s) | 622 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 328, 380 |
| NcoI | CCATGG | 1 cut(s) | 281 |
| NdeII | GATC | 2 cut(s) | 580, 636 |
| NlaIII | CATG | 4 cut(s) | 285, 341, 383, 611 |
| NlaIV | GGNNCC | 1 cut(s) | 54 |
| NmeAIII | GCCGAG | 1 cut(s) | 752 |
| NsiI | ATGCAT | 1 cut(s) | 152 |
| PaqCI | CACCTGC | 1 cut(s) | 217 |
| PfeI | GAWTC | 5 cut(s) | 452, 506, 707, 719, 783 |
| PleI | GAGTC | 1 cut(s) | 42 |
| PpsI | GAGTC | 1 cut(s) | 42 |
| PpuMI | RGGWCCY | 1 cut(s) | 52 |
| PshBI | ATTAAT | 1 cut(s) | 255 |
| Psp124BI | GAGCTC | 1 cut(s) | 779 |
| Psp5II | RGGWCCY | 1 cut(s) | 52 |
| PspN4I | GGNNCC | 1 cut(s) | 54 |
| PspPI | GGNCC | 3 cut(s) | 52, 173, 604 |
| PspPPI | RGGWCCY | 1 cut(s) | 52 |
| RseI | CAYNNNNRTG | 1 cut(s) | 342 |
| SacI | GAGCTC | 1 cut(s) | 779 |
| SaqAI | TTAA | 2 cut(s) | 255, 744 |
| Sau3AI | GATC | 2 cut(s) | 580, 636 |
| Sau96I | GGNCC | 3 cut(s) | 52, 173, 604 |
| SchI | GAGTC | 1 cut(s) | 43 |
| SduI | GDGCHC | 1 cut(s) | 779 |
| SfaNI | GCATC | 2 cut(s) | 105, 520 |
| SinI | GGWCC | 3 cut(s) | 52, 173, 604 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 342 |
| SmlI | CTYRAG | 1 cut(s) | 743 |
| SmoI | CTYRAG | 1 cut(s) | 743 |
| Sse9I | AATT | 2 cut(s) | 622, 769 |
| SsiI | CCGC | 1 cut(s) | 341 |
| SspMI | CTAG | 4 cut(s) | 315, 384, 533, 755 |
| SstI | GAGCTC | 1 cut(s) | 779 |
| StyI | CCWWGG | 1 cut(s) | 281 |
| TaaI | ACNGT | 3 cut(s) | 26, 130, 790 |
| TaqI | TCGA | 1 cut(s) | 99 |
| TasI | AATT | 2 cut(s) | 622, 769 |
| TfiI | GAWTC | 5 cut(s) | 452, 506, 707, 719, 783 |
| Tru1I | TTAA | 2 cut(s) | 255, 744 |
| Tru9I | TTAA | 2 cut(s) | 255, 744 |
| TspDTI | ATGAA | 2 cut(s) | 561, 695 |
| Vha464I | CTTAAG | 1 cut(s) | 743 |
| VpaK11BI | GGWCC | 3 cut(s) | 52, 173, 604 |
| VspI | ATTAAT | 1 cut(s) | 255 |
| XapI | RAATTY | 1 cut(s) | 769 |
| XspI | CTAG | 4 cut(s) | 315, 384, 533, 755 |
| Zsp2I | ATGCAT | 1 cut(s) | 152 |