Transcription activator that binds DNA on 5'-ACTCTAC-3' and promotes auxin homeostasis-regulating gene expression (e.g. YUC genes), as well as genes affecting stamen development, cell expansion and timing of flowering. Synergistically with other SHI- related proteins, regulates gynoecium, stamen and leaf development in a dose-dependent manner, controlling apical-basal patterning. Promotes style and stigma formation, and
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G21400 AT2G21400 AT2G21400 AT2G21400 |
| fragaria_vesca | FvH4_2g10010 FvH4_2g10010 |
| malus_domestica | MD05G1058700.v1.1 MD10G1066400.v1.1 |
| prunus_persica | Prupe.8G088300_v2.0.a1 |
| pyrus_communis | pycom05g04960 pycom10g05190 |
| rosa_chinensis | RchiOBHm_Chr6g0266901 |
| rosa_laevigata | RLG00000014061 |
| rosa_multiflora | Rmu_ssc0000486.1_g000003 |
| rosa_roxburghii | Rroxscaffold_7G00201300 |
| rosa_rugosa | Rorug06G0028000 Rorug06G0028100 |
| rosa_samantha | Rh6AG149100 Rh6BG150100 Rh6CG145000 Rh6DG134300 |
| rosa_wichuraiana | Rw6G012900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 399 |
| Acc65I | GGTACC | 1 cut(s) | 494 |
| AccB1I | GGYRCC | 1 cut(s) | 494 |
| AccBSI | CCGCTC | 1 cut(s) | 178 |
| AciI | CCGC | 1 cut(s) | 176 |
| AdeI | CACNNNGTG | 1 cut(s) | 379 |
| AfaI | GTAC | 3 cut(s) | 65, 204, 496 |
| AflIII | ACRYGT | 1 cut(s) | 337 |
| AgsI | TTSAA | 3 cut(s) | 282, 441, 460 |
| AhlI | ACTAGT | 1 cut(s) | 185 |
| AjnI | CCWGG | 1 cut(s) | 220 |
| Alw21I | GWGCWC | 1 cut(s) | 128 |
| ApeKI | GCWGC | 1 cut(s) | 84 |
| Asp718I | GGTACC | 1 cut(s) | 494 |
| AspS9I | GGNCC | 1 cut(s) | 511 |
| AsuHPI | GGTGA | 1 cut(s) | 334 |
| AvaII | GGWCC | 1 cut(s) | 511 |
| BanI | GGYRCC | 1 cut(s) | 494 |
| Bbv12I | GWGCWC | 1 cut(s) | 128 |
| BbvI | GCAGC | 1 cut(s) | 71 |
| BccI | CCATC | 2 cut(s) | 284, 376 |
| BciT130I | CCWGG | 1 cut(s) | 222 |
| BciVI | GTATCC | 1 cut(s) | 200 |
| BcuI | ACTAGT | 1 cut(s) | 185 |
| BfaI | CTAG | 2 cut(s) | 186, 251 |
| BfmI | CTRYAG | 1 cut(s) | 142 |
| BfuI | GTATCC | 1 cut(s) | 200 |
| BglII | AGATCT | 1 cut(s) | 149 |
| BisI | GCNGC | 1 cut(s) | 85 |
| BlsI | GCNGC | 1 cut(s) | 86 |
| Bme1390I | CCNGG | 1 cut(s) | 222 |
| Bme18I | GGWCC | 1 cut(s) | 511 |
| BmgT120I | GGNCC | 1 cut(s) | 511 |
| BmiI | GGNNCC | 2 cut(s) | 135, 496 |
| BmrFI | CCNGG | 1 cut(s) | 222 |
| BmsI | GCATC | 2 cut(s) | 62, 254 |
| Bsa29I | ATCGAT | 1 cut(s) | 285 |
| BsaJI | CCNNGG | 1 cut(s) | 318 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 10, 40, 324, 354 |
| Bse3DI | GCAATG | 1 cut(s) | 103 |
| BseBI | CCWGG | 1 cut(s) | 222 |
| BseCI | ATCGAT | 1 cut(s) | 285 |
| BseDI | CCNNGG | 1 cut(s) | 318 |
| BseMI | GCAATG | 1 cut(s) | 103 |
| BseXI | GCAGC | 1 cut(s) | 71 |
| BshNI | GGYRCC | 1 cut(s) | 494 |
| BshVI | ATCGAT | 1 cut(s) | 285 |
| BsiHKAI | GWGCWC | 1 cut(s) | 128 |
| BsiSI | CCGG | 1 cut(s) | 233 |
| BslFI | GGGAC | 1 cut(s) | 438 |
| BsmFI | GGGAC | 1 cut(s) | 438 |
| Bsp1286I | GDGCHC | 1 cut(s) | 128 |
| Bsp1407I | TGTACA | 2 cut(s) | 63, 202 |
| Bsp143I | GATC | 4 cut(s) | 149, 361, 388, 462 |
| BspACI | CCGC | 1 cut(s) | 176 |
| BspDI | ATCGAT | 1 cut(s) | 285 |
| BspLI | GGNNCC | 2 cut(s) | 135, 496 |
| BspT107I | GGYRCC | 1 cut(s) | 494 |
| BsrBI | CCGCTC | 1 cut(s) | 178 |
| BsrDI | GCAATG | 1 cut(s) | 103 |
| BsrGI | TGTACA | 2 cut(s) | 63, 202 |
| BssECI | CCNNGG | 1 cut(s) | 318 |
| BssMI | GATC | 4 cut(s) | 149, 361, 388, 462 |
| Bst2UI | CCWGG | 1 cut(s) | 222 |
| Bst4CI | ACNGT | 1 cut(s) | 322 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 81 |
| BstAUI | TGTACA | 2 cut(s) | 63, 202 |
| BstDEI | CTNAG | 1 cut(s) | 515 |
| BstDSI | CCRYGG | 1 cut(s) | 318 |
| BstKTI | GATC | 4 cut(s) | 152, 364, 391, 465 |
| BstMBI | GATC | 4 cut(s) | 149, 361, 388, 462 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 81 |
| BstNI | CCWGG | 1 cut(s) | 222 |
| BstNSI | RCATGY | 1 cut(s) | 341 |
| BstSCI | CCNGG | 1 cut(s) | 220 |
| BstSFI | CTRYAG | 1 cut(s) | 142 |
| BstV1I | GCAGC | 1 cut(s) | 71 |
| BstX2I | RGATCY | 1 cut(s) | 149 |
| BstYI | RGATCY | 1 cut(s) | 149 |
| Bsu15I | ATCGAT | 1 cut(s) | 285 |
| BsuI | GTATCC | 1 cut(s) | 200 |
| BsuTUI | ATCGAT | 1 cut(s) | 285 |
| BtgI | CCRYGG | 1 cut(s) | 318 |
| Cfr13I | GGNCC | 1 cut(s) | 511 |
| ClaI | ATCGAT | 1 cut(s) | 285 |
| Csp6I | GTAC | 3 cut(s) | 64, 203, 495 |
| CviAII | CATG | 4 cut(s) | 67, 338, 450, 487 |
| CviJI | RGCY | 1 cut(s) | 98 |
| CviKI_1 | RGCY | 1 cut(s) | 98 |
| CviQI | GTAC | 3 cut(s) | 64, 203, 495 |
| DdeI | CTNAG | 1 cut(s) | 515 |
| DpnI | GATC | 4 cut(s) | 151, 363, 390, 464 |
| DpnII | GATC | 4 cut(s) | 149, 361, 388, 462 |
| DraIII | CACNNNGTG | 1 cut(s) | 379 |
| Eco47I | GGWCC | 1 cut(s) | 511 |
| EcoRII | CCWGG | 1 cut(s) | 220 |
| FaeI | CATG | 4 cut(s) | 70, 341, 453, 490 |
| FaiI | YATR | 7 cut(s) | 68, 144, 306, 339, 399, 451, 488 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 414, 446 |
| FaqI | GGGAC | 1 cut(s) | 438 |
| FatI | CATG | 4 cut(s) | 66, 337, 449, 486 |
| Fnu4HI | GCNGC | 1 cut(s) | 85 |
| Fsp4HI | GCNGC | 1 cut(s) | 85 |
| FspBI | CTAG | 2 cut(s) | 186, 251 |
| GluI | GCNGC | 1 cut(s) | 85 |
| HapII | CCGG | 1 cut(s) | 233 |
| Hin1II | CATG | 4 cut(s) | 70, 341, 453, 490 |
| HinfI | GANTC | 3 cut(s) | 40, 352, 369 |
| HpaII | CCGG | 1 cut(s) | 233 |
| HphI | GGTGA | 1 cut(s) | 334 |
| Hpy166II | GTNNAC | 3 cut(s) | 64, 203, 325 |
| Hpy188I | TCNGA | 3 cut(s) | 263, 315, 347 |
| Hpy188III | TCNNGA | 3 cut(s) | 121, 359, 422 |
| Hpy8I | GTNNAC | 3 cut(s) | 64, 203, 325 |
| HpyAV | CCTTC | 2 cut(s) | 109, 447 |
| HpyCH4III | ACNGT | 1 cut(s) | 322 |
| HpyCH4V | TGCA | 2 cut(s) | 75, 87 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 81 |
| HpyF3I | CTNAG | 1 cut(s) | 515 |
| Hsp92II | CATG | 4 cut(s) | 70, 341, 453, 490 |
| KpnI | GGTACC | 1 cut(s) | 498 |
| Kzo9I | GATC | 4 cut(s) | 149, 361, 388, 462 |
| LpnPI | CCDG | 4 cut(s) | 150, 207, 234, 246 |
| Lsp1109I | GCAGC | 1 cut(s) | 71 |
| LweI | GCATC | 2 cut(s) | 62, 254 |
| MaeI | CTAG | 2 cut(s) | 186, 251 |
| MaeIII | GTNAC | 1 cut(s) | 426 |
| MalI | GATC | 4 cut(s) | 151, 363, 390, 464 |
| MbiI | CCGCTC | 1 cut(s) | 178 |
| MboI | GATC | 4 cut(s) | 149, 361, 388, 462 |
| MboII | GAAGA | 7 cut(s) | 41, 61, 159, 347, 438, 472, 498 |
| MflI | RGATCY | 1 cut(s) | 149 |
| MhlI | GDGCHC | 1 cut(s) | 128 |
| MlyI | GAGTC | 1 cut(s) | 363 |
| MnlI | CCTC | 2 cut(s) | 326, 341 |
| MspI | CCGG | 1 cut(s) | 233 |
| MspR9I | CCNGG | 1 cut(s) | 222 |
| MvaI | CCWGG | 1 cut(s) | 222 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 81 |
| NdeII | GATC | 4 cut(s) | 149, 361, 388, 462 |
| NlaIII | CATG | 4 cut(s) | 70, 341, 453, 490 |
| NlaIV | GGNNCC | 2 cut(s) | 135, 496 |
| NspI | RCATGY | 1 cut(s) | 341 |
| PciI | ACATGT | 1 cut(s) | 337 |
| PfeI | GAWTC | 2 cut(s) | 40, 352 |
| PfoI | TCCNGGA | 1 cut(s) | 220 |
| PkrI | GCNGC | 1 cut(s) | 86 |
| PleI | GAGTC | 1 cut(s) | 363 |
| PpsI | GAGTC | 1 cut(s) | 363 |
| PscI | ACATGT | 1 cut(s) | 337 |
| PsiI | TTATAA | 1 cut(s) | 399 |
| Psp6I | CCWGG | 1 cut(s) | 220 |
| PspGI | CCWGG | 1 cut(s) | 220 |
| PspN4I | GGNNCC | 2 cut(s) | 135, 496 |
| PspPI | GGNCC | 1 cut(s) | 511 |
| PsuI | RGATCY | 1 cut(s) | 149 |
| RsaI | GTAC | 3 cut(s) | 65, 204, 496 |
| RsaNI | GTAC | 3 cut(s) | 64, 203, 495 |
| SatI | GCNGC | 1 cut(s) | 85 |
| Sau3AI | GATC | 4 cut(s) | 149, 361, 388, 462 |
| Sau96I | GGNCC | 1 cut(s) | 511 |
| SchI | GAGTC | 1 cut(s) | 363 |
| ScrFI | CCNGG | 1 cut(s) | 222 |
| SduI | GDGCHC | 1 cut(s) | 128 |
| SetI | ASST | 1 cut(s) | 202 |
| SfaNI | GCATC | 2 cut(s) | 62, 254 |
| SfcI | CTRYAG | 1 cut(s) | 142 |
| SinI | GGWCC | 1 cut(s) | 511 |
| SpeI | ACTAGT | 1 cut(s) | 185 |
| SsiI | CCGC | 1 cut(s) | 176 |
| SspMI | CTAG | 2 cut(s) | 186, 251 |
| StyD4I | CCNGG | 1 cut(s) | 220 |
| TaaI | ACNGT | 1 cut(s) | 322 |
| TaqI | TCGA | 1 cut(s) | 285 |
| TaqII | GACCGA | 1 cut(s) | 499 |
| TatI | WGTACW | 2 cut(s) | 63, 202 |
| TfiI | GAWTC | 2 cut(s) | 40, 352 |
| TseI | GCWGC | 1 cut(s) | 84 |
| TspDTI | ATGAA | 2 cut(s) | 438, 475 |
| VpaK11BI | GGWCC | 1 cut(s) | 511 |
| XceI | RCATGY | 1 cut(s) | 341 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 218 |
| XspI | CTAG | 2 cut(s) | 186, 251 |