nucleic acid binding
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G23740 AT2G23740 AT2G23740 AT2G23740 AT2G23740 AT2G23740 |
| fragaria_vesca | FvH4_1g14350 FvH4_1g14350 FvH4_1g14350 FvH4_1g14350 FvH4_1g14350 FvH4_1g14350 FvH4_1g14350 |
| malus_domestica | MD02G1157000.v1.1 MD15G1271600.v1.1 |
| prunus_persica | Prupe.7G146600_v2.0.a1 Prupe.7G146600_v2.0.a1 Prupe.7G146600_v2.0.a1 Prupe.7G146600_v2.0.a1 Prupe.7G146600_v2.0.a1 Prupe.7G146600_v2.0.a1 Prupe.7G146600_v2.0.a1 Prupe.7G146600_v2.0.a1 |
| pyrus_communis | pycom02g12410 pycom15g23560 |
| rosa_chinensis | RchiOBHm_Chr2g0103021 |
| rosa_laevigata | RLG00000017201 |
| rosa_multiflora | Rmu_sc0000388.1_g000017 |
| rosa_roxburghii | Rroxscaffold_2G00139990 |
| rosa_rugosa | Rorug02G0111400 Rorug02G0111400 Rorug02G0111500 Rorug02G0111500 |
| rosa_samantha | Rh2AG159700 Rh2BG166200 Rh2CG166400 Rh2DG165100 |
| rosa_wichuraiana | Rw2G012480 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 414, 557 |
| AarI | CACCTGC | 1 cut(s) | 1127 |
| Acc36I | ACCTGC | 1 cut(s) | 1127 |
| Acc65I | GGTACC | 2 cut(s) | 1421, 4057 |
| AccB1I | GGYRCC | 3 cut(s) | 1421, 1582, 4057 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1100, 3539 |
| AccBSI | CCGCTC | 1 cut(s) | 3979 |
| AccI | GTMKAC | 1 cut(s) | 3465 |
| AccII | CGCG | 4 cut(s) | 1858, 3112, 3648, 3650 |
| AclWI | GGATC | 7 cut(s) | 375, 395, 656, 669, 1116, 3100, 3396 |
| AcoI | YGGCCR | 2 cut(s) | 272, 2539 |
| AcuI | CTGAAG | 6 cut(s) | 507, 558, 1238, 2270, 2448, 2787 |
| AcvI | CACGTG | 1 cut(s) | 2257 |
| AfaI | GTAC | 9 cut(s) | 115, 699, 1423, 1460, 1953, 2337, 2484, 3024, 4059 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 526, 1100, 1400, 1484, 2432, 2537, 2600, 3539 |
| AflII | CTTAAG | 4 cut(s) | 434, 1781, 1840, 4120 |
| AflIII | ACRYGT | 2 cut(s) | 2338, 3614 |
| AgeI | ACCGGT | 1 cut(s) | 4054 |
| AjiI | CACGTC | 2 cut(s) | 34, 950 |
| AjnI | CCWGG | 1 cut(s) | 912 |
| AleI | CACNNNNGTG | 1 cut(s) | 1396 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2719, 2751 |
| Alw21I | GWGCWC | 2 cut(s) | 3443, 3867 |
| AlwI | GGATC | 7 cut(s) | 375, 395, 656, 669, 1116, 3100, 3396 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2332 |
| Ama87I | CYCGRG | 3 cut(s) | 1035, 1448, 4035 |
| AoxI | GGCC | 2 cut(s) | 272, 2539 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 3248, 3280 |
| AsiGI | ACCGGT | 1 cut(s) | 4054 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1212, 3279 |
| Asp718I | GGTACC | 2 cut(s) | 1421, 4057 |
| AspLEI | GCGC | 1 cut(s) | 3650 |
| AspS9I | GGNCC | 4 cut(s) | 137, 1604, 2567, 2591 |
| AsuC2I | CCSGG | 2 cut(s) | 1449, 1450 |
| AvaI | CYCGRG | 3 cut(s) | 1035, 1448, 4035 |
| AvaII | GGWCC | 4 cut(s) | 137, 1604, 2567, 2591 |
| BalI | TGGCCA | 1 cut(s) | 274 |
| BamHI | GGATCC | 1 cut(s) | 661 |
| BanI | GGYRCC | 3 cut(s) | 1421, 1582, 4057 |
| BanII | GRGCYC | 3 cut(s) | 1376, 1629, 3867 |
| BauI | CACGAG | 3 cut(s) | 355, 1639, 2586 |
| BbrPI | CACGTG | 1 cut(s) | 2257 |
| BbsI | GAAGAC | 1 cut(s) | 1163 |
| Bbv12I | GWGCWC | 2 cut(s) | 3443, 3867 |
| BceAI | ACGGC | 3 cut(s) | 840, 1570, 2526 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 359, 393, 2904, 2938 |
| BciT130I | CCWGG | 1 cut(s) | 914 |
| BciVI | GTATCC | 2 cut(s) | 2038, 3041 |
| BclI | TGATCA | 2 cut(s) | 3457, 3754 |
| BcnI | CCSGG | 2 cut(s) | 1449, 1450 |
| BfmI | CTRYAG | 2 cut(s) | 2926, 4017 |
| BfrI | CTTAAG | 4 cut(s) | 434, 1781, 1840, 4120 |
| BfuAI | ACCTGC | 1 cut(s) | 1127 |
| BfuI | GTATCC | 2 cut(s) | 2038, 3041 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 187 |
| BglII | AGATCT | 1 cut(s) | 1834 |
| Bme1390I | CCNGG | 3 cut(s) | 914, 1449, 1450 |
| Bme18I | GGWCC | 4 cut(s) | 137, 1604, 2567, 2591 |
| BmeT110I | CYCGRG | 3 cut(s) | 1035, 1448, 4035 |
| BmgBI | CACGTC | 2 cut(s) | 34, 950 |
| BmgT120I | GGNCC | 4 cut(s) | 137, 1604, 2567, 2591 |
| BmiI | GGNNCC | 7 cut(s) | 663, 1423, 1584, 1626, 1636, 2568, 4059 |
| BmrFI | CCNGG | 3 cut(s) | 914, 1449, 1450 |
| BmrI | ACTGGG | 1 cut(s) | 1972 |
| BmsI | GCATC | 8 cut(s) | 2362, 2718, 2812, 3046, 3324, 3593, 3871, 4090 |
| BmuI | ACTGGG | 1 cut(s) | 1972 |
| BpiI | GAAGAC | 1 cut(s) | 1163 |
| BpmI | CTGGAG | 2 cut(s) | 2019, 2793 |
| BpuEI | CTTGAG | 3 cut(s) | 695, 959, 2975 |
| BpuMI | CCSGG | 2 cut(s) | 1449, 1450 |
| Bsa29I | ATCGAT | 1 cut(s) | 3127 |
| BsaAI | YACGTR | 2 cut(s) | 2257, 3463 |
| BsaBI | GATNNNNATC | 1 cut(s) | 3303 |
| BsaI | GGTCTC | 3 cut(s) | 2936, 3217, 4121 |
| BsaJI | CCNNGG | 5 cut(s) | 856, 1448, 1630, 2536, 3338 |
| BsaWI | WCCGGW | 3 cut(s) | 134, 2979, 4054 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1036, 1066 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 526, 1100, 1400, 1484, 2432, 2537, 2600, 3539 |
| Bse118I | RCCGGY | 1 cut(s) | 4054 |
| Bse1I | ACTGG | 8 cut(s) | 275, 514, 1781, 1967, 2077, 3784, 3819, 4002 |
| Bse3DI | GCAATG | 6 cut(s) | 582, 828, 1259, 1292, 2827, 3038 |
| Bse8I | GATNNNNATC | 1 cut(s) | 3303 |
| BseBI | CCWGG | 1 cut(s) | 914 |
| BseCI | ATCGAT | 1 cut(s) | 3127 |
| BseDI | CCNNGG | 5 cut(s) | 856, 1448, 1630, 2536, 3338 |
| BseJI | GATNNNNATC | 1 cut(s) | 3303 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 526, 1100, 1400, 1484, 2432, 2537, 2600, 3539 |
| BseMI | GCAATG | 6 cut(s) | 582, 828, 1259, 1292, 2827, 3038 |
| BseNI | ACTGG | 8 cut(s) | 275, 514, 1781, 1967, 2077, 3784, 3819, 4002 |
| BseRI | GAGGAG | 3 cut(s) | 2258, 2737, 3578 |
| BsgI | GTGCAG | 2 cut(s) | 972, 2279 |
| Bsh1236I | CGCG | 4 cut(s) | 1858, 3112, 3648, 3650 |
| BshFI | GGCC | 2 cut(s) | 274, 2541 |
| BshNI | GGYRCC | 3 cut(s) | 1421, 1582, 4057 |
| BshTI | ACCGGT | 1 cut(s) | 4054 |
| BshVI | ATCGAT | 1 cut(s) | 3127 |
| BsiHKAI | GWGCWC | 2 cut(s) | 3443, 3867 |
| BsiHKCI | CYCGRG | 3 cut(s) | 1035, 1448, 4035 |
| BsiSI | CCGG | 6 cut(s) | 83, 135, 881, 1449, 2980, 4055 |
| BslFI | GGGAC | 3 cut(s) | 1925, 2580, 3958 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 526, 1100, 1400, 1484, 2432, 2537, 2600, 3539 |
| BsmBI | CGTCTC | 1 cut(s) | 1052 |
| BsmFI | GGGAC | 3 cut(s) | 1925, 2580, 3958 |
| BsmI | GAATGC | 4 cut(s) | 727, 2396, 3350, 3590 |
| BsnI | GGCC | 2 cut(s) | 274, 2541 |
| Bso31I | GGTCTC | 3 cut(s) | 2936, 3217, 4121 |
| BsoBI | CYCGRG | 3 cut(s) | 1035, 1448, 4035 |
| Bsp1286I | GDGCHC | 4 cut(s) | 1376, 1629, 3443, 3867 |
| Bsp1407I | TGTACA | 1 cut(s) | 3022 |
| Bsp19I | CCATGG | 1 cut(s) | 1630 |
| BspANI | GGCC | 2 cut(s) | 274, 2541 |
| BspDI | ATCGAT | 1 cut(s) | 3127 |
| BspFNI | CGCG | 4 cut(s) | 1858, 3112, 3648, 3650 |
| BspHI | TCATGA | 3 cut(s) | 304, 604, 1152 |
| BspLI | GGNNCC | 7 cut(s) | 663, 1423, 1584, 1626, 1636, 2568, 4059 |
| BspMAI | CTGCAG | 1 cut(s) | 4021 |
| BspMI | ACCTGC | 1 cut(s) | 1127 |
| BspPI | GGATC | 7 cut(s) | 375, 395, 656, 669, 1116, 3100, 3396 |
| BspQI | GCTCTTC | 2 cut(s) | 1913, 3855 |
| BspT107I | GGYRCC | 3 cut(s) | 1421, 1582, 4057 |
| BspTI | CTTAAG | 4 cut(s) | 434, 1781, 1840, 4120 |
| BspTNI | GGTCTC | 3 cut(s) | 2936, 3217, 4121 |
| BsrBI | CCGCTC | 1 cut(s) | 3979 |
| BsrDI | GCAATG | 6 cut(s) | 582, 828, 1259, 1292, 2827, 3038 |
| BsrFI | RCCGGY | 1 cut(s) | 4054 |
| BsrGI | TGTACA | 1 cut(s) | 3022 |
| BsrI | ACTGG | 8 cut(s) | 275, 514, 1781, 1967, 2077, 3784, 3819, 4002 |
| BssAI | RCCGGY | 1 cut(s) | 4054 |
| BssECI | CCNNGG | 5 cut(s) | 856, 1448, 1630, 2536, 3338 |
| BssNAI | GTATAC | 1 cut(s) | 3466 |
| BssSI | CACGAG | 3 cut(s) | 355, 1639, 2586 |
| BssT1I | CCWWGG | 3 cut(s) | 1630, 2536, 3338 |
| Bst1107I | GTATAC | 1 cut(s) | 3466 |
| Bst2BI | CACGAG | 3 cut(s) | 355, 1639, 2586 |
| Bst2UI | CCWGG | 1 cut(s) | 914 |
| Bst6I | CTCTTC | 5 cut(s) | 1520, 1913, 2714, 3855, 4020 |
| BstAFI | CTTAAG | 4 cut(s) | 434, 1781, 1840, 4120 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 722, 2350 |
| BstAUI | TGTACA | 1 cut(s) | 3022 |
| BstBAI | YACGTR | 2 cut(s) | 2257, 3463 |
| BstDSI | CCRYGG | 2 cut(s) | 856, 1630 |
| BstEII | GGTNACC | 1 cut(s) | 130 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 1482, 2430 |
| BstFNI | CGCG | 4 cut(s) | 1858, 3112, 3648, 3650 |
| BstHHI | GCGC | 1 cut(s) | 3650 |
| BstNI | CCWGG | 1 cut(s) | 914 |
| BstNSI | RCATGY | 2 cut(s) | 2342, 3618 |
| BstPI | GGTNACC | 1 cut(s) | 130 |
| BstSCI | CCNGG | 3 cut(s) | 912, 1447, 1448 |
| BstSFI | CTRYAG | 2 cut(s) | 2926, 4017 |
| BstUI | CGCG | 4 cut(s) | 1858, 3112, 3648, 3650 |
| BstV2I | GAAGAC | 1 cut(s) | 1163 |
| BstX2I | RGATCY | 4 cut(s) | 661, 1108, 1834, 3388 |
| BstYI | RGATCY | 4 cut(s) | 661, 1108, 1834, 3388 |
| BstZ17I | GTATAC | 1 cut(s) | 3466 |
| Bsu15I | ATCGAT | 1 cut(s) | 3127 |
| BsuI | GTATCC | 2 cut(s) | 2038, 3041 |
| BsuRI | GGCC | 2 cut(s) | 274, 2541 |
| BsuTUI | ATCGAT | 1 cut(s) | 3127 |
| BtgI | CCRYGG | 2 cut(s) | 856, 1630 |
| BtgZI | GCGATG | 1 cut(s) | 2864 |
| BtrI | CACGTC | 2 cut(s) | 34, 950 |
| BtsI | GCAGTG | 3 cut(s) | 723, 1732, 3237 |
| BtsIMutI | CAGTG | 6 cut(s) | 723, 1732, 2294, 2763, 3237, 3441 |
| BveI | ACCTGC | 1 cut(s) | 1127 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2332 |
| CciI | TCATGA | 3 cut(s) | 304, 604, 1152 |
| CfoI | GCGC | 1 cut(s) | 3650 |
| Cfr10I | RCCGGY | 1 cut(s) | 4054 |
| Cfr13I | GGNCC | 4 cut(s) | 137, 1604, 2567, 2591 |
| Cfr9I | CCCGGG | 1 cut(s) | 1448 |
| ClaI | ATCGAT | 1 cut(s) | 3127 |
| CseI | GACGC | 6 cut(s) | 474, 2003, 3155, 3500, 3833, 4056 |
| Csp6I | GTAC | 9 cut(s) | 114, 698, 1422, 1459, 1952, 2336, 2483, 3023, 4058 |
| CspAI | ACCGGT | 1 cut(s) | 4054 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2488, 2523 |
| CviQI | GTAC | 9 cut(s) | 114, 698, 1422, 1459, 1952, 2336, 2483, 3023, 4058 |
| DraI | TTTAAA | 1 cut(s) | 96 |
| EaeI | YGGCCR | 2 cut(s) | 272, 2539 |
| Eam1104I | CTCTTC | 5 cut(s) | 1520, 1913, 2714, 3855, 4020 |
| EarI | CTCTTC | 5 cut(s) | 1520, 1913, 2714, 3855, 4020 |
| EciI | GGCGGA | 1 cut(s) | 377 |
| Ecl136II | GAGCTC | 1 cut(s) | 3865 |
| Eco130I | CCWWGG | 3 cut(s) | 1630, 2536, 3338 |
| Eco24I | GRGCYC | 3 cut(s) | 1376, 1629, 3867 |
| Eco31I | GGTCTC | 3 cut(s) | 2936, 3217, 4121 |
| Eco32I | GATATC | 1 cut(s) | 2899 |
| Eco47I | GGWCC | 4 cut(s) | 137, 1604, 2567, 2591 |
| Eco53kI | GAGCTC | 1 cut(s) | 3865 |
| Eco57I | CTGAAG | 6 cut(s) | 507, 558, 1238, 2270, 2448, 2787 |
| Eco72I | CACGTG | 1 cut(s) | 2257 |
| Eco88I | CYCGRG | 3 cut(s) | 1035, 1448, 4035 |
| Eco91I | GGTNACC | 1 cut(s) | 130 |
| EcoICRI | GAGCTC | 1 cut(s) | 3865 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 1482, 2430 |
| EcoO65I | GGTNACC | 1 cut(s) | 130 |
| EcoRI | GAATTC | 3 cut(s) | 2009, 3313, 3642 |
| EcoRII | CCWGG | 1 cut(s) | 912 |
| EcoRV | GATATC | 1 cut(s) | 2899 |
| EcoT14I | CCWWGG | 3 cut(s) | 1630, 2536, 3338 |
| EcoT22I | ATGCAT | 1 cut(s) | 1259 |
| EcoT38I | GRGCYC | 3 cut(s) | 1376, 1629, 3867 |
| ErhI | CCWWGG | 3 cut(s) | 1630, 2536, 3338 |
| Esp3I | CGTCTC | 1 cut(s) | 1052 |
| FaqI | GGGAC | 3 cut(s) | 1925, 2580, 3958 |
| FauI | CCCGC | 3 cut(s) | 1194, 3117, 3984 |
| FauNDI | CATATG | 3 cut(s) | 975, 3053, 3535 |
| FbaI | TGATCA | 2 cut(s) | 3457, 3754 |
| FblI | GTMKAC | 1 cut(s) | 3465 |
| FriOI | GRGCYC | 3 cut(s) | 1376, 1629, 3867 |
| GlaI | GCGC | 1 cut(s) | 3649 |
| GsuI | CTGGAG | 2 cut(s) | 2019, 2793 |
| HaeIII | GGCC | 2 cut(s) | 274, 2541 |
| HapII | CCGG | 6 cut(s) | 83, 135, 881, 1449, 2980, 4055 |
| HgaI | GACGC | 6 cut(s) | 474, 2003, 3155, 3500, 3833, 4056 |
| HhaI | GCGC | 1 cut(s) | 3650 |
| Hin6I | GCGC | 1 cut(s) | 3648 |
| HinP1I | GCGC | 1 cut(s) | 3648 |
| HincII | GTYRAC | 2 cut(s) | 511, 1551 |
| HindII | GTYRAC | 2 cut(s) | 511, 1551 |
| HindIII | AAGCTT | 5 cut(s) | 482, 629, 1884, 1977, 2222 |
| HpaII | CCGG | 6 cut(s) | 83, 135, 881, 1449, 2980, 4055 |
| Hpy166II | GTNNAC | 9 cut(s) | 511, 1145, 1551, 1760, 2441, 3023, 3145, 3466, 3704 |
| Hpy8I | GTNNAC | 9 cut(s) | 511, 1145, 1551, 1760, 2441, 3023, 3145, 3466, 3704 |
| Hpy99I | CGWCG | 2 cut(s) | 951, 3299 |
| HpyCH4IV | ACGT | 6 cut(s) | 33, 815, 949, 2256, 3462, 3550 |
| HpySE526I | ACGT | 6 cut(s) | 33, 815, 949, 2256, 3462, 3550 |
| HspAI | GCGC | 1 cut(s) | 3648 |
| KpnI | GGTACC | 2 cut(s) | 1425, 4061 |
| Ksp22I | TGATCA | 2 cut(s) | 3457, 3754 |
| LguI | GCTCTTC | 2 cut(s) | 1913, 3855 |
| LmnI | GCTCC | 4 cut(s) | 1624, 1634, 2245, 2675 |
| LweI | GCATC | 8 cut(s) | 2362, 2718, 2812, 3046, 3324, 3593, 3871, 4090 |
| MaeII | ACGT | 6 cut(s) | 33, 815, 949, 2256, 3462, 3550 |
| MbiI | CCGCTC | 1 cut(s) | 3979 |
| MfeI | CAATTG | 1 cut(s) | 1011 |
| MflI | RGATCY | 4 cut(s) | 661, 1108, 1834, 3388 |
| MhlI | GDGCHC | 4 cut(s) | 1376, 1629, 3443, 3867 |
| MlsI | TGGCCA | 1 cut(s) | 274 |
| MluNI | TGGCCA | 1 cut(s) | 274 |
| MlyI | GAGTC | 8 cut(s) | 173, 785, 989, 1010, 1255, 1813, 2581, 3980 |
| MmeI | TCCRAC | 2 cut(s) | 1984, 3153 |
| Mox20I | TGGCCA | 1 cut(s) | 274 |
| Mph1103I | ATGCAT | 1 cut(s) | 1259 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1212, 3279 |
| MscI | TGGCCA | 1 cut(s) | 274 |
| MslI | CAYNNNNRTG | 3 cut(s) | 1203, 1396, 1652 |
| Msp20I | TGGCCA | 1 cut(s) | 274 |
| MspA1I | CMGCKG | 1 cut(s) | 3924 |
| MspCI | CTTAAG | 4 cut(s) | 434, 1781, 1840, 4120 |
| MspI | CCGG | 6 cut(s) | 83, 135, 881, 1449, 2980, 4055 |
| MspR9I | CCNGG | 3 cut(s) | 914, 1449, 1450 |
| MunI | CAATTG | 1 cut(s) | 1011 |
| Mva1269I | GAATGC | 4 cut(s) | 727, 2396, 3350, 3590 |
| MvaI | CCWGG | 1 cut(s) | 914 |
| MvnI | CGCG | 4 cut(s) | 1858, 3112, 3648, 3650 |
| NciI | CCSGG | 2 cut(s) | 1449, 1450 |
| NcoI | CCATGG | 1 cut(s) | 1630 |
| NdeI | CATATG | 3 cut(s) | 975, 3053, 3535 |
| NlaIV | GGNNCC | 7 cut(s) | 663, 1423, 1584, 1626, 1636, 2568, 4059 |
| NmeAIII | GCCGAG | 1 cut(s) | 2727 |
| NmuCI | GTSAC | 3 cut(s) | 124, 168, 2543 |
| NsiI | ATGCAT | 1 cut(s) | 1259 |
| NspI | RCATGY | 2 cut(s) | 2342, 3618 |
| OliI | CACNNNNGTG | 1 cut(s) | 1396 |
| PaeR7I | CTCGAG | 1 cut(s) | 1035 |
| PagI | TCATGA | 3 cut(s) | 304, 604, 1152 |
| PaqCI | CACCTGC | 1 cut(s) | 1127 |
| PciI | ACATGT | 2 cut(s) | 2338, 3614 |
| PciSI | GCTCTTC | 2 cut(s) | 1913, 3855 |
| PctI | GAATGC | 4 cut(s) | 727, 2396, 3350, 3590 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1212, 3279 |
| PflFI | GACNNNGTC | 1 cut(s) | 2571 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1100, 3539 |
| PinAI | ACCGGT | 1 cut(s) | 4054 |
| PleI | GAGTC | 8 cut(s) | 172, 784, 988, 1010, 1254, 1812, 2580, 3979 |
| PmaCI | CACGTG | 1 cut(s) | 2257 |
| PmlI | CACGTG | 1 cut(s) | 2257 |
| PpsI | GAGTC | 8 cut(s) | 172, 784, 988, 1010, 1254, 1812, 2580, 3979 |
| Ppu21I | YACGTR | 2 cut(s) | 2257, 3463 |
| PscI | ACATGT | 2 cut(s) | 2338, 3614 |
| PsiI | TTATAA | 2 cut(s) | 414, 557 |
| Psp124BI | GAGCTC | 1 cut(s) | 3867 |
| Psp6I | CCWGG | 1 cut(s) | 912 |
| PspCI | CACGTG | 1 cut(s) | 2257 |
| PspEI | GGTNACC | 1 cut(s) | 130 |
| PspGI | CCWGG | 1 cut(s) | 912 |
| PspN4I | GGNNCC | 7 cut(s) | 663, 1423, 1584, 1626, 1636, 2568, 4059 |
| PspPI | GGNCC | 4 cut(s) | 137, 1604, 2567, 2591 |
| PstI | CTGCAG | 1 cut(s) | 4021 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2332 |
| PsuI | RGATCY | 4 cut(s) | 661, 1108, 1834, 3388 |
| PsyI | GACNNNGTC | 1 cut(s) | 2571 |
| PvuII | CAGCTG | 1 cut(s) | 3924 |
| RsaI | GTAC | 9 cut(s) | 115, 699, 1423, 1460, 1953, 2337, 2484, 3024, 4059 |
| RsaNI | GTAC | 9 cut(s) | 114, 698, 1422, 1459, 1952, 2336, 2483, 3023, 4058 |
| RseI | CAYNNNNRTG | 3 cut(s) | 1203, 1396, 1652 |
| SacI | GAGCTC | 1 cut(s) | 3867 |
| SapI | GCTCTTC | 2 cut(s) | 1913, 3855 |
| Sau96I | GGNCC | 4 cut(s) | 137, 1604, 2567, 2591 |
| SchI | GAGTC | 8 cut(s) | 173, 785, 989, 1010, 1255, 1813, 2581, 3980 |
| ScrFI | CCNGG | 3 cut(s) | 914, 1449, 1450 |
| SduI | GDGCHC | 4 cut(s) | 1376, 1629, 3443, 3867 |
| SfaNI | GCATC | 8 cut(s) | 2362, 2718, 2812, 3046, 3324, 3593, 3871, 4090 |
| SfcI | CTRYAG | 2 cut(s) | 2926, 4017 |
| Sfr274I | CTCGAG | 1 cut(s) | 1035 |
| SinI | GGWCC | 4 cut(s) | 137, 1604, 2567, 2591 |
| SlaI | CTCGAG | 1 cut(s) | 1035 |
| SmaI | CCCGGG | 1 cut(s) | 1450 |
| SmiI | ATTTAAAT | 1 cut(s) | 96 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 1203, 1396, 1652 |
| SmlI | CTYRAG | 8 cut(s) | 434, 674, 938, 1035, 1781, 1840, 2990, 4120 |
| SmoI | CTYRAG | 8 cut(s) | 434, 674, 938, 1035, 1781, 1840, 2990, 4120 |
| SspI | AATATT | 1 cut(s) | 3166 |
| SstI | GAGCTC | 1 cut(s) | 3867 |
| StyD4I | CCNGG | 3 cut(s) | 912, 1447, 1448 |
| StyI | CCWWGG | 3 cut(s) | 1630, 2536, 3338 |
| SwaI | ATTTAAAT | 1 cut(s) | 96 |
| TaiI | ACGT | 6 cut(s) | 36, 818, 952, 2259, 3465, 3553 |
| TaqII | GACCGA | 2 cut(s) | 2584, 3980 |
| TatI | WGTACW | 3 cut(s) | 1458, 1951, 3022 |
| TauI | GCSGC | 2 cut(s) | 2481, 2785 |
| TscAI | CASTG | 6 cut(s) | 723, 1732, 2294, 2770, 3244, 3441 |
| TseFI | GTSAC | 3 cut(s) | 124, 168, 2543 |
| Tsp45I | GTSAC | 3 cut(s) | 124, 168, 2543 |
| TspGWI | ACGGA | 3 cut(s) | 1664, 3078, 3369 |
| TspMI | CCCGGG | 1 cut(s) | 1448 |
| TspRI | CASTG | 6 cut(s) | 723, 1732, 2294, 2770, 3244, 3441 |
| Tth111I | GACNNNGTC | 1 cut(s) | 2571 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1100, 3539 |
| Vha464I | CTTAAG | 4 cut(s) | 434, 1781, 1840, 4120 |
| VpaK11BI | GGWCC | 4 cut(s) | 137, 1604, 2567, 2591 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 1482, 2430 |
| XbaI | TCTAGA | 1 cut(s) | 3608 |
| XceI | RCATGY | 2 cut(s) | 2342, 3618 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 213, 3791 |
| XhoI | CTCGAG | 1 cut(s) | 1035 |
| XmaI | CCCGGG | 1 cut(s) | 1448 |
| XmiI | GTMKAC | 1 cut(s) | 3465 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1212, 3279 |
| Zsp2I | ATGCAT | 1 cut(s) | 1259 |