Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0003021

Physical Location & Seq

Genomic Coordinates Forward (+)

9554946 .. 9560547

Gene Structure 5602 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0111500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2031 bp

ATGGCGATAACTTCCCTCAGAGGCAAGGGCAACAATCACTTGTTATCTCGCCTCAAACTCCTTCTTAACCAGCAACAGCAGAGACTCGCCCACACGCTCTCCGAAGGCCCTCAGTCCCGCCCAAAAATGGTTCCTGAGTCGGTCCATGAAGAGGGGTTGATTGACATGTCGAAATGGAGAAAGGTGGATTCGAGGGTGCTTGGGATAACACGGTCCATGATTCCCGAGTCATCTTGGAACGTCTTGAGAATACTTCGAAGGGAAGGGTTTGAAGCCTACTTAGTGGGCGGATGTGTGAGGGACTTGATCCTCAAAAGAATTCCTAAAGACTTTGATGTGATCACTACAGCTAATCTTAAGCAGATCAAGAGGCAGTTCCATCGTGCACAAATTGTCGGACAACGATTTCCTATATGTATGGTGCATATTAAAGGTTCTGTCATAGAGGTATCCAGTTTTGAAACGGTGGCAAAAGCAAAACACTCTGATAAAGAAGTTACTTTCTCTCAAATGCCAAAGGGCTGTGATAAGAAAGATTTCATCCGCTGGAGAAACAGCATGCATCGAGACTTCACAATTAACAGTTTGTTCTTTGATCCTTTATCAAATAAAATCTTTGATTATGCAAATGGAATGGCGGATTTGAAATCCTCAAAGCTACGGTCGTTAGGCTCTGCCAAGTTGTCATTTAAAGAGGATTGCGCAAGAATTTTACGTGGCTTAAGAATTGCTGCTCGTCTGAGTTTGAAAATTTCAAAAGAAACCGAGAAAGCTATACATAAGTTTTCTTCATCCATTTCGACATTGGCAACGAGTAGAATTATGATGGAAATGAACTATATGCTTTCTTATGGAGCTGCTGAGCCATCTCTCTGTCTGCTTTGGGAATTCAATCTACTCAGAGTTCTACTTCCAATTCATGCAGCATACTTGGATGAACAGAGGATTAGGAAGTTTCCTCAGAATTCCACGATGTTGATGAAACTATTCTTTAATTTGGATAAAGTTGTCACGGTTGATCGACCTTCTGACTGCAGTTTATGGGTAGCTCTGTTGGCTTTTCACATGGCACTGGTCAGTCACCCTCAAGACGCTCTTGTGGTGTTCACCTTTGCTTCTATCCTGTATCGTGGGGGATGCAAAAAGGGTCTTACATTTGCTAGAGACAATGCTCAAGTGATAGTTGACTATCTACCTGAGATCTCAAGTTCATCTGCATGTAAATCAAAGGAAGAGCTTGAAAAAGAAGTTTCCCTATTGGCCTCTCTTGTTTTAGATTCTATTGCTGCTCTAACTGCAACTGAGAGTCTTGTCGAAACGATGTCTAAGTATCCTGAATCTCCATGCTCTGGATTGGTATTTGTACCAAAGAAAACTGCCCAAAGTGTTGCTGAAATTTTTAGAGTTCTGGCGGATGACATCAAATCTTACAACAGAGAAAGAAAAAGTTATGAAATTGATTACCCTGTACTTCGGAAAGGTTTTCTGCACGAGACAAGATTTGTGCTTGGCAAAATTATTTTAGAAACCATGAGCAGTAGTATTTTGAAAGGGGAGGAATTTGTTCAGGAGGACTACCGACACCTGGAGCAGGAGAACATTAAGGAAAATTGCAATAAGGGTAAAAAACGTGGCCTTAAACCTGATACTCCTGAACTAAAACAAGAGATTGCGAAGAAACATAAGTTGGTCGAAAAGAAATGCAGACCGTTGGAGCAAGAGATGGATATTGATAACCAAGATGCTGTAACAATATCACAATTGGTTTCAGTTCTGGGACATAATGTAGAGAAGGAAACATGCCAGTTACCTGAAGAGAAGGTGATAAAGAAAAAACATAAGGCAACGAAGCAGCAGTGTGTACCATGGGATGAGGCAACGAAGCAGCAACTAAAGACAGTTGAGAAGAATAATGACAAGGAGAATGACAGTCTATCTAGTCTCTCGAACGGTGAGAAGGTACAGAAACGAAAAGTACCAGACAAGGGGGAGAAAAGCAGTCAATTTCGACTGTCTAGTCTTTTCAAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000502 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005829 GO:0005839 GO:0016020 GO:0019774 GO:0031090 GO:0032991 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0098588 GO:0098805 GO:1902494 GO:1905368 GO:1905369

KEGG Pathways

Metabolic & Signaling

ko03050 map03050

Pfam Domains

Protein Families

Proteasome

Protein Analysis

676

Amino Acids

77.01

Weight (kDa)

9.38

Isoelectric Point (pI)

47.66

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PolyA_pol	PF01743	92 - 221	3.8e-25	Poly A polymerase head domain
PolyA_pol_RNAbd	PF12627	249 - 310	1.5e-15	Probable RNA and SrmB- binding site of polymerase A

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003021)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G23740 AT2G23740 AT2G23740 AT2G23740 AT2G23740 AT2G23740
fragaria_vesca	FvH4_1g14350 FvH4_1g14350 FvH4_1g14350 FvH4_1g14350 FvH4_1g14350 FvH4_1g14350 FvH4_1g14350
malus_domestica	MD02G1157000.v1.1 MD15G1271600.v1.1
prunus_persica	Prupe.7G146600_v2.0.a1 Prupe.7G146600_v2.0.a1 Prupe.7G146600_v2.0.a1 Prupe.7G146600_v2.0.a1 Prupe.7G146600_v2.0.a1 Prupe.7G146600_v2.0.a1 Prupe.7G146600_v2.0.a1 Prupe.7G146600_v2.0.a1
pyrus_communis	pycom02g12410 pycom15g23560
rosa_chinensis	RchiOBHm_Chr2g0103021
rosa_laevigata	RLG00000017201
rosa_multiflora	Rmu_sc0000388.1_g000017
rosa_roxburghii	Rroxscaffold_2G00139990
rosa_rugosa	Rorug02G0111400 Rorug02G0111400 Rorug02G0111500 Rorug02G0111500
rosa_samantha	Rh2AG159700 Rh2BG166200 Rh2CG166400 Rh2DG165100
rosa_wichuraiana	Rw2G012480

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	2016
Acc16I	TGCGCA	1 cut(s)	703
AccB7I	CCANNNNNTGG	1 cut(s)	1349
AciI	CCGC	5 cut(s)	118, 288, 544, 638, 1412
AclWI	GGATC	2 cut(s)	301, 590
AcsI	RAATTY	7 cut(s)	318, 708, 750, 887, 964, 1395, 1559
AcuI	CTGAAG	1 cut(s)	1833
AfaI	GTAC	5 cut(s)	1365, 1470, 1863, 1962, 1977
AfiI	CCNNNNNNNGG	6 cut(s)	127, 151, 1349, 1585, 1591, 1985
AflII	CTTAAG	2 cut(s)	356, 721
AflIII	ACRYGT	1 cut(s)	165
AgsI	TTSAA	9 cut(s)	272, 461, 646, 748, 756, 892, 1241, 1549, 2026
AjnI	CCWGG	1 cut(s)	1584
AjuI	GAANNNNNNNTTGG	2 cut(s)	1670, 1702
AluBI	AGCT	6 cut(s)	350, 658, 773, 857, 1049, 1237
AluI	AGCT	6 cut(s)	350, 658, 773, 857, 1049, 1237
Alw21I	GWGCWC	1 cut(s)	388
Alw26I	GTCTC	5 cut(s)	76, 561, 1158, 1487, 1946
Alw44I	GTGCAC	1 cut(s)	384
AlwI	GGATC	2 cut(s)	301, 590
Ama87I	CYCGRG	1 cut(s)	224
AoxI	GGCC	3 cut(s)	106, 1260, 1633
ApaLI	GTGCAC	1 cut(s)	384
ApeKI	GCWGC	6 cut(s)	731, 857, 923, 1286, 1852, 1885
ApoI	RAATTY	7 cut(s)	318, 708, 750, 887, 964, 1395, 1559
ArsI	GACNNNNNNTTYG	2 cut(s)	647, 679
Asp700I	GAANNNNTTC	3 cut(s)	536, 986, 1563
AspLEI	GCGC	1 cut(s)	704
AspS9I	GGNCC	3 cut(s)	107, 142, 213
AsuHPI	GGTGA	4 cut(s)	1073, 1099, 1834, 1964
AsuII	TTCGAA	1 cut(s)	256
AvaI	CYCGRG	1 cut(s)	224
AvaII	GGWCC	2 cut(s)	142, 213
BaeGI	GKGCMC	1 cut(s)	388
BauI	CACGAG	1 cut(s)	1490
Bbv12I	GWGCWC	1 cut(s)	388
BbvI	GCAGC	6 cut(s)	718, 844, 935, 1273, 1864, 1897
BccI	CCATC	4 cut(s)	387, 820, 874, 1717
BcgI	CGANNNNNNTGC	2 cut(s)	362, 396
BciT130I	CCWGG	1 cut(s)	1586
BciVI	GTATCC	2 cut(s)	460, 1341
BclI	TGATCA	1 cut(s)	339
BcoDI	GTCTC	5 cut(s)	76, 561, 1158, 1487, 1946
BfaI	CTAG	3 cut(s)	1161, 1938, 2016
BfmI	CTRYAG	2 cut(s)	345, 1033
BfrI	CTTAAG	2 cut(s)	356, 721
BfuI	GTATCC	2 cut(s)	460, 1341
BglII	AGATCT	1 cut(s)	1200
BisI	GCNGC	6 cut(s)	732, 858, 924, 1287, 1853, 1886
BlpI	GCTNAGC	1 cut(s)	861
BlsI	GCNGC	6 cut(s)	733, 859, 925, 1288, 1854, 1887
Bme1390I	CCNGG	1 cut(s)	1586
Bme18I	GGWCC	2 cut(s)	142, 213
BmeT110I	CYCGRG	1 cut(s)	224
BmgT120I	GGNCC	3 cut(s)	107, 142, 213
BmiI	GGNNCC	1 cut(s)	132
BmrFI	CCNGG	1 cut(s)	1586
BmsI	GCATC	3 cut(s)	571, 1127, 1732
BpmI	CTGGAG	2 cut(s)	568, 1607
Bpu1102I	GCTNAGC	1 cut(s)	861
Bpu14I	TTCGAA	1 cut(s)	256
BpuEI	CTTGAG	4 cut(s)	265, 1071, 1158, 1189
BsaAI	YACGTR	1 cut(s)	716
BsaJI	CCNNGG	1 cut(s)	1865
BsaXI	ACNNNNNCTCC	2 cut(s)	83, 113
Bsc4I	CCNNNNNNNGG	6 cut(s)	127, 151, 1349, 1585, 1591, 1985
Bse1I	ACTGG	3 cut(s)	453, 1077, 1804
BseBI	CCWGG	1 cut(s)	1586
BseDI	CCNNGG	1 cut(s)	1865
BseGI	GGATG	7 cut(s)	296, 540, 791, 940, 1142, 1420, 1876
BseLI	CCNNNNNNNGG	6 cut(s)	127, 151, 1349, 1585, 1591, 1985
BseMII	CTCAG	9 cut(s)	31, 125, 126, 731, 852, 913, 974, 1188, 1293
BseNI	ACTGG	3 cut(s)	453, 1077, 1804
BseSI	GKGCMC	1 cut(s)	388
BseXI	GCAGC	6 cut(s)	718, 844, 935, 1273, 1864, 1897
BsgI	GTGCAG	1 cut(s)	1472
Bsh1285I	CGRYCG	1 cut(s)	665
BshFI	GGCC	3 cut(s)	108, 1262, 1635
BsiEI	CGRYCG	1 cut(s)	665
BsiHKAI	GWGCWC	1 cut(s)	388
BsiHKCI	CYCGRG	1 cut(s)	224
BslFI	GGGAC	3 cut(s)	100, 314, 1791
BslI	CCNNNNNNNGG	6 cut(s)	127, 151, 1349, 1585, 1591, 1985
BsmAI	GTCTC	5 cut(s)	76, 561, 1158, 1487, 1946
BsmFI	GGGAC	3 cut(s)	100, 314, 1791
BsnI	GGCC	3 cut(s)	108, 1262, 1635
BsoBI	CYCGRG	1 cut(s)	224
Bsp119I	TTCGAA	1 cut(s)	256
Bsp1286I	GDGCHC	1 cut(s)	388
Bsp143I	GATC	6 cut(s)	306, 339, 363, 595, 1018, 1200
Bsp1720I	GCTNAGC	1 cut(s)	861
Bsp19I	CCATGG	1 cut(s)	1865
BspACI	CCGC	5 cut(s)	118, 288, 544, 638, 1412
BspANI	GGCC	3 cut(s)	108, 1262, 1635
BspCNI	CTCAG	9 cut(s)	30, 124, 127, 732, 853, 912, 973, 1189, 1294
BspLI	GGNNCC	1 cut(s)	132
BspMAI	CTGCAG	1 cut(s)	1037
BspPI	GGATC	2 cut(s)	301, 590
BspQI	GCTCTTC	1 cut(s)	1227
BspT104I	TTCGAA	1 cut(s)	256
BspTI	CTTAAG	2 cut(s)	356, 721
BsrI	ACTGG	3 cut(s)	453, 1077, 1804
BssECI	CCNNGG	1 cut(s)	1865
BssMI	GATC	6 cut(s)	306, 339, 363, 595, 1018, 1200
BssSI	CACGAG	1 cut(s)	1490
BssT1I	CCWWGG	1 cut(s)	1865
Bst2BI	CACGAG	1 cut(s)	1490
Bst2UI	CCWGG	1 cut(s)	1586
Bst6I	CTCTTC	3 cut(s)	144, 1227, 1809
BstAFI	CTTAAG	2 cut(s)	356, 721
BstBAI	YACGTR	1 cut(s)	716
BstBI	TTCGAA	1 cut(s)	256
BstC8I	GCNNGC	1 cut(s)	560
BstDSI	CCRYGG	1 cut(s)	1865
BstENI	CCTNNNNNAGG	1 cut(s)	1589
BstF5I	GGATG	7 cut(s)	296, 540, 791, 940, 1142, 1420, 1876
BstHHI	GCGC	1 cut(s)	704
BstKTI	GATC	6 cut(s)	309, 342, 366, 598, 1021, 1203
BstMAI	GTCTC	5 cut(s)	76, 561, 1158, 1487, 1946
BstMBI	GATC	6 cut(s)	306, 339, 363, 595, 1018, 1200
BstMCI	CGRYCG	1 cut(s)	665
BstMWI	GCNNNNNNNGC	2 cut(s)	1055, 1295
BstNI	CCWGG	1 cut(s)	1586
BstNSI	RCATGY	4 cut(s)	169, 562, 1221, 1803
BstSCI	CCNGG	1 cut(s)	1584
BstSFI	CTRYAG	2 cut(s)	345, 1033
BstSLI	GKGCMC	1 cut(s)	388
BstV1I	GCAGC	6 cut(s)	718, 844, 935, 1273, 1864, 1897
BstX2I	RGATCY	1 cut(s)	1200
BstYI	RGATCY	1 cut(s)	1200
BsuI	GTATCC	2 cut(s)	460, 1341
BsuRI	GGCC	3 cut(s)	108, 1262, 1635
BtgI	CCRYGG	1 cut(s)	1865
BtsCI	GGATG	7 cut(s)	296, 540, 791, 940, 1142, 1420, 1876
BtsI	GCAGTG	1 cut(s)	1862
BtsIMutI	CAGTG	2 cut(s)	1070, 1862
Cac8I	GCNNGC	1 cut(s)	560
CfoI	GCGC	1 cut(s)	704
Cfr13I	GGNCC	3 cut(s)	107, 142, 213
CseI	GACGC	1 cut(s)	1100
Csp6I	GTAC	5 cut(s)	1364, 1469, 1862, 1961, 1976
CviQI	GTAC	5 cut(s)	1364, 1469, 1862, 1961, 1976
DpnI	GATC	6 cut(s)	308, 341, 365, 597, 1020, 1202
DpnII	GATC	6 cut(s)	306, 339, 363, 595, 1018, 1200
DraI	TTTAAA	1 cut(s)	691
DrdI	GACNNNNNNGTC	1 cut(s)	2016
DseDI	GACNNNNNNGTC	1 cut(s)	2016
Eam1104I	CTCTTC	3 cut(s)	144, 1227, 1809
EarI	CTCTTC	3 cut(s)	144, 1227, 1809
EciI	GGCGGA	3 cut(s)	303, 653, 1427
Eco130I	CCWWGG	1 cut(s)	1865
Eco47I	GGWCC	2 cut(s)	142, 213
Eco57I	CTGAAG	1 cut(s)	1833
Eco88I	CYCGRG	1 cut(s)	224
EcoNI	CCTNNNNNAGG	1 cut(s)	1589
EcoO109I	RGGNCCY	1 cut(s)	107
EcoRI	GAATTC	3 cut(s)	318, 887, 964
EcoRII	CCWGG	1 cut(s)	1584
EcoT14I	CCWWGG	1 cut(s)	1865
EcoT22I	ATGCAT	1 cut(s)	564
ErhI	CCWWGG	1 cut(s)	1865
FalI	AAGNNNNNCTT	2 cut(s)	1080, 1112
FaqI	GGGAC	3 cut(s)	100, 314, 1791
FauI	CCCGC	1 cut(s)	125
FbaI	TGATCA	1 cut(s)	339
Fnu4HI	GCNGC	6 cut(s)	732, 858, 924, 1287, 1853, 1886
FokI	GGATG	7 cut(s)	303, 527, 778, 947, 1149, 1427, 1883
Fsp4HI	GCNGC	6 cut(s)	732, 858, 924, 1287, 1853, 1886
FspBI	CTAG	3 cut(s)	1161, 1938, 2016
FspI	TGCGCA	1 cut(s)	703
GlaI	GCGC	1 cut(s)	703
GluI	GCNGC	6 cut(s)	732, 858, 924, 1287, 1853, 1886
GsuI	CTGGAG	2 cut(s)	568, 1607
HaeIII	GGCC	3 cut(s)	108, 1262, 1635
HgaI	GACGC	1 cut(s)	1100
HhaI	GCGC	1 cut(s)	704
Hin6I	GCGC	1 cut(s)	702
HinP1I	GCGC	1 cut(s)	702
HincII	GTYRAC	1 cut(s)	1186
HindII	GTYRAC	1 cut(s)	1186
HinfI	GANTC	8 cut(s)	84, 137, 188, 220, 227, 1277, 1306, 1337
HphI	GGTGA	4 cut(s)	1073, 1099, 1834, 1964
Hpy166II	GTNNAC	4 cut(s)	386, 1107, 1186, 1862
Hpy188I	TCNGA	9 cut(s)	20, 103, 398, 487, 741, 902, 963, 1030, 1476
Hpy8I	GTNNAC	4 cut(s)	386, 1107, 1186, 1862
HpyAV	CCTTC	8 cut(s)	71, 98, 252, 257, 1035, 1786, 1813, 1951
HpyCH4IV	ACGT	3 cut(s)	240, 715, 1630
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1055, 1295
HpySE526I	ACGT	3 cut(s)	240, 715, 1630
HspAI	GCGC	1 cut(s)	702
Ksp22I	TGATCA	1 cut(s)	339
Kzo9I	GATC	6 cut(s)	306, 339, 363, 595, 1018, 1200
LguI	GCTCTTC	1 cut(s)	1227
LmnI	GCTCC	3 cut(s)	854, 1588, 1714
Lsp1109I	GCAGC	6 cut(s)	718, 844, 935, 1273, 1864, 1897
LweI	GCATC	3 cut(s)	571, 1127, 1732
MaeI	CTAG	3 cut(s)	1161, 1938, 2016
MaeII	ACGT	3 cut(s)	240, 715, 1630
MaeIII	GTNAC	5 cut(s)	496, 1009, 1079, 1747, 1806
MalI	GATC	6 cut(s)	308, 341, 365, 597, 1020, 1202
MboI	GATC	6 cut(s)	306, 339, 363, 595, 1018, 1200
MboII	GAAGA	6 cut(s)	161, 780, 1244, 1687, 1826, 1918
MfeI	CAATTG	1 cut(s)	1760
MflI	RGATCY	1 cut(s)	1200
MhlI	GDGCHC	1 cut(s)	388
MlyI	GAGTC	4 cut(s)	78, 146, 236, 1315
MmeI	TCCRAC	2 cut(s)	376, 1692
Mph1103I	ATGCAT	1 cut(s)	564
MroXI	GAANNNNTTC	3 cut(s)	536, 986, 1563
MseI	TTAA	9 cut(s)	66, 357, 429, 579, 690, 722, 993, 1602, 1638
MslI	CAYNNNNRTG	1 cut(s)	1216
MspA1I	CMGCKG	1 cut(s)	546
MspCI	CTTAAG	2 cut(s)	356, 721
MspR9I	CCNGG	1 cut(s)	1586
MunI	CAATTG	1 cut(s)	1760
MvaI	CCWGG	1 cut(s)	1586
MwoI	GCNNNNNNNGC	2 cut(s)	1055, 1295
NcoI	CCATGG	1 cut(s)	1865
NdeII	GATC	6 cut(s)	306, 339, 363, 595, 1018, 1200
NlaIV	GGNNCC	1 cut(s)	132
NmuCI	GTSAC	2 cut(s)	1009, 1079
NsbI	TGCGCA	1 cut(s)	703
NsiI	ATGCAT	1 cut(s)	564
NspI	RCATGY	4 cut(s)	169, 562, 1221, 1803
NspV	TTCGAA	1 cut(s)	256
PaeI	GCATGC	1 cut(s)	562
PciI	ACATGT	1 cut(s)	165
PciSI	GCTCTTC	1 cut(s)	1227
PdmI	GAANNNNTTC	3 cut(s)	536, 986, 1563
PfeI	GAWTC	4 cut(s)	188, 220, 1277, 1337
PflMI	CCANNNNNTGG	1 cut(s)	1349
PkrI	GCNGC	6 cut(s)	733, 859, 925, 1288, 1854, 1887
PleI	GAGTC	4 cut(s)	78, 145, 235, 1314
PpsI	GAGTC	4 cut(s)	78, 145, 235, 1314
Ppu21I	YACGTR	1 cut(s)	716
PscI	ACATGT	1 cut(s)	165
Psp6I	CCWGG	1 cut(s)	1584
PspGI	CCWGG	1 cut(s)	1584
PspN4I	GGNNCC	1 cut(s)	132
PspPI	GGNCC	3 cut(s)	107, 142, 213
PstI	CTGCAG	1 cut(s)	1037
PsuI	RGATCY	1 cut(s)	1200
RsaI	GTAC	5 cut(s)	1365, 1470, 1863, 1962, 1977
RsaNI	GTAC	5 cut(s)	1364, 1469, 1862, 1961, 1976
RseI	CAYNNNNRTG	1 cut(s)	1216
SapI	GCTCTTC	1 cut(s)	1227
SaqAI	TTAA	9 cut(s)	66, 357, 429, 579, 690, 722, 993, 1602, 1638
SatI	GCNGC	6 cut(s)	732, 858, 924, 1287, 1853, 1886
Sau3AI	GATC	6 cut(s)	306, 339, 363, 595, 1018, 1200
Sau96I	GGNCC	3 cut(s)	107, 142, 213
SchI	GAGTC	4 cut(s)	78, 146, 236, 1315
ScrFI	CCNGG	1 cut(s)	1586
SduI	GDGCHC	1 cut(s)	388
SfaNI	GCATC	3 cut(s)	571, 1127, 1732
SfcI	CTRYAG	2 cut(s)	345, 1033
SfuI	TTCGAA	1 cut(s)	256
SinI	GGWCC	2 cut(s)	142, 213
SmiMI	CAYNNNNRTG	1 cut(s)	1216
SmlI	CTYRAG	6 cut(s)	244, 356, 721, 1086, 1173, 1204
SmoI	CTYRAG	6 cut(s)	244, 356, 721, 1086, 1173, 1204
SphI	GCATGC	1 cut(s)	562
SsiI	CCGC	5 cut(s)	118, 288, 544, 638, 1412
SspMI	CTAG	3 cut(s)	1161, 1938, 2016
StyD4I	CCNGG	1 cut(s)	1584
StyI	CCWWGG	1 cut(s)	1865
TaiI	ACGT	3 cut(s)	243, 718, 1633
TaqII	GACCGA	1 cut(s)	130
TatI	WGTACW	1 cut(s)	1468
TfiI	GAWTC	4 cut(s)	188, 220, 1277, 1337
Tru1I	TTAA	9 cut(s)	66, 357, 429, 579, 690, 722, 993, 1602, 1638
Tru9I	TTAA	9 cut(s)	66, 357, 429, 579, 690, 722, 993, 1602, 1638
TscAI	CASTG	2 cut(s)	1077, 1862
TseFI	GTSAC	2 cut(s)	1009, 1079
TseI	GCWGC	6 cut(s)	731, 857, 923, 1286, 1852, 1885
Tsp45I	GTSAC	2 cut(s)	1009, 1079
TspDTI	ATGAA	9 cut(s)	162, 529, 780, 848, 908, 951, 995, 1200, 1467
TspRI	CASTG	2 cut(s)	1077, 1862
Van91I	CCANNNNNTGG	1 cut(s)	1349
Vha464I	CTTAAG	2 cut(s)	356, 721
VneI	GTGCAC	1 cut(s)	384
VpaK11BI	GGWCC	2 cut(s)	142, 213
XagI	CCTNNNNNAGG	1 cut(s)	1589
XapI	RAATTY	7 cut(s)	318, 708, 750, 887, 964, 1395, 1559
XceI	RCATGY	4 cut(s)	169, 562, 1221, 1803
XcmI	CCANNNNNNNNNTGG	1 cut(s)	802
XmnI	GAANNNNTTC	3 cut(s)	536, 986, 1563
XspI	CTAG	3 cut(s)	1161, 1938, 2016
Zsp2I	ATGCAT	1 cut(s)	564

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.