Histone-lysine n-methyltransferase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G23740 AT2G23740 AT2G23740 AT2G23740 AT2G23740 AT2G23740 |
| fragaria_vesca | FvH4_1g14350 FvH4_1g14350 FvH4_1g14350 FvH4_1g14350 FvH4_1g14350 FvH4_1g14350 FvH4_1g14350 |
| malus_domestica | MD02G1157000.v1.1 MD15G1271600.v1.1 |
| prunus_persica | Prupe.7G146600_v2.0.a1 Prupe.7G146600_v2.0.a1 Prupe.7G146600_v2.0.a1 Prupe.7G146600_v2.0.a1 Prupe.7G146600_v2.0.a1 Prupe.7G146600_v2.0.a1 Prupe.7G146600_v2.0.a1 Prupe.7G146600_v2.0.a1 |
| pyrus_communis | pycom02g12410 pycom15g23560 |
| rosa_chinensis | RchiOBHm_Chr2g0103021 |
| rosa_laevigata | RLG00000017201 |
| rosa_multiflora | Rmu_sc0000388.1_g000017 |
| rosa_roxburghii | Rroxscaffold_2G00139990 |
| rosa_rugosa | Rorug02G0111400 Rorug02G0111400 Rorug02G0111500 Rorug02G0111500 |
| rosa_samantha | Rh2AG159700 Rh2BG166200 Rh2CG166400 Rh2DG165100 |
| rosa_wichuraiana | Rw2G012480 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 3692 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 3027 |
| Acc36I | ACCTGC | 2 cut(s) | 2871, 3692 |
| Acc65I | GGTACC | 1 cut(s) | 3128 |
| AccB1I | GGYRCC | 1 cut(s) | 3128 |
| AccI | GTMKAC | 4 cut(s) | 366, 1137, 1796, 3868 |
| AccII | CGCG | 1 cut(s) | 3832 |
| AciI | CCGC | 3 cut(s) | 125, 1223, 3830 |
| AclI | AACGTT | 1 cut(s) | 922 |
| AclWI | GGATC | 4 cut(s) | 1264, 1892, 3077, 3585 |
| AcsI | RAATTY | 8 cut(s) | 635, 812, 904, 1292, 1783, 3046, 3216, 3443 |
| AcuI | CTGAAG | 5 cut(s) | 219, 234, 890, 1668, 2310 |
| AdeI | CACNNNGTG | 2 cut(s) | 1679, 3200 |
| AfaI | GTAC | 5 cut(s) | 984, 1608, 3130, 3147, 3490 |
| AfeI | AGCGCT | 1 cut(s) | 2000 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 164, 1061, 1560, 2041, 2918, 3518, 3741 |
| AflII | CTTAAG | 2 cut(s) | 986, 1802 |
| AflIII | ACRYGT | 2 cut(s) | 2395, 3854 |
| AhlI | ACTAGT | 2 cut(s) | 997, 1154 |
| AjiI | CACGTC | 1 cut(s) | 707 |
| AjnI | CCWGG | 4 cut(s) | 1239, 1390, 1513, 2583 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2044, 2076 |
| AleI | CACNNNNGTG | 1 cut(s) | 1662 |
| Alw21I | GWGCWC | 2 cut(s) | 12, 2211 |
| AlwI | GGATC | 4 cut(s) | 1264, 1892, 3077, 3585 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 425, 2831 |
| Ama87I | CYCGRG | 1 cut(s) | 3787 |
| Aor51HI | AGCGCT | 1 cut(s) | 2000 |
| AoxI | GGCC | 3 cut(s) | 1199, 2280, 3251 |
| ApaI | GGGCCC | 1 cut(s) | 2284 |
| ApoI | RAATTY | 8 cut(s) | 635, 812, 904, 1292, 1783, 3046, 3216, 3443 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 3712, 3744 |
| Asp718I | GGTACC | 1 cut(s) | 3128 |
| AspLEI | GCGC | 1 cut(s) | 2001 |
| AspS9I | GGNCC | 7 cut(s) | 155, 1163, 2280, 2281, 2948, 3521, 3646 |
| AsuC2I | CCSGG | 3 cut(s) | 3650, 3788, 3789 |
| AsuHPI | GGTGA | 6 cut(s) | 98, 188, 1601, 2801, 2918, 3481 |
| AvaI | CYCGRG | 1 cut(s) | 3787 |
| AvaII | GGWCC | 5 cut(s) | 155, 1163, 2948, 3521, 3646 |
| AxyI | CCTNAGG | 1 cut(s) | 2259 |
| BaeGI | GKGCMC | 1 cut(s) | 2284 |
| BanI | GGYRCC | 1 cut(s) | 3128 |
| BanII | GRGCYC | 2 cut(s) | 2211, 2284 |
| BauI | CACGAG | 2 cut(s) | 789, 3525 |
| BbsI | GAAGAC | 5 cut(s) | 175, 1389, 1778, 3025, 3678 |
| Bbv12I | GWGCWC | 2 cut(s) | 12, 2211 |
| BbvCI | CCTCAGC | 1 cut(s) | 2769 |
| BccI | CCATC | 9 cut(s) | 635, 1154, 1409, 1580, 1784, 1852, 2518, 2937, 3407 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1949, 1983 |
| BciT130I | CCWGG | 4 cut(s) | 1241, 1392, 1515, 2585 |
| BciVI | GTATCC | 1 cut(s) | 2979 |
| BclI | TGATCA | 1 cut(s) | 1666 |
| BcnI | CCSGG | 3 cut(s) | 3650, 3788, 3789 |
| BcuI | ACTAGT | 2 cut(s) | 997, 1154 |
| BfmI | CTRYAG | 3 cut(s) | 1269, 1849, 3376 |
| BfoI | RGCGCY | 1 cut(s) | 2002 |
| BfrI | CTTAAG | 2 cut(s) | 986, 1802 |
| BfuAI | ACCTGC | 2 cut(s) | 2871, 3692 |
| BfuI | GTATCC | 1 cut(s) | 2979 |
| BglII | AGATCT | 2 cut(s) | 1502, 3503 |
| BmcAI | AGTACT | 1 cut(s) | 984 |
| Bme1390I | CCNGG | 7 cut(s) | 1241, 1392, 1515, 2585, 3650, 3788, 3789 |
| Bme18I | GGWCC | 5 cut(s) | 155, 1163, 2948, 3521, 3646 |
| BmeT110I | CYCGRG | 1 cut(s) | 3787 |
| BmgBI | CACGTC | 1 cut(s) | 707 |
| BmgT120I | GGNCC | 7 cut(s) | 155, 1163, 2280, 2281, 2948, 3521, 3646 |
| BmiI | GGNNCC | 7 cut(s) | 1066, 1165, 2282, 2756, 2949, 3130, 3648 |
| BmrFI | CCNGG | 7 cut(s) | 1241, 1392, 1515, 2585, 3650, 3788, 3789 |
| BmrI | ACTGGG | 1 cut(s) | 2451 |
| BmuI | ACTGGG | 1 cut(s) | 2451 |
| BpiI | GAAGAC | 5 cut(s) | 175, 1389, 1778, 3025, 3678 |
| BpmI | CTGGAG | 2 cut(s) | 1019, 3341 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2769 |
| BpuEI | CTTGAG | 1 cut(s) | 3601 |
| BpuMI | CCSGG | 3 cut(s) | 3650, 3788, 3789 |
| Bsa29I | ATCGAT | 2 cut(s) | 630, 3862 |
| BsaBI | GATNNNNATC | 4 cut(s) | 3010, 3405, 3573, 3687 |
| BsaI | GGTCTC | 1 cut(s) | 1659 |
| BsaJI | CCNNGG | 9 cut(s) | 1239, 1391, 1554, 1696, 2412, 2801, 3740, 3786, 3787 |
| BsaWI | WCCGGW | 2 cut(s) | 3131, 3466 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 222, 252, 1410, 1440, 2168, 2198 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 164, 1061, 1560, 2041, 2918, 3518, 3741 |
| Bse1I | ACTGG | 6 cut(s) | 1027, 1896, 2446, 2525, 2671, 2961 |
| Bse21I | CCTNAGG | 1 cut(s) | 2259 |
| Bse3DI | GCAATG | 4 cut(s) | 1046, 1536, 1571, 2441 |
| Bse8I | GATNNNNATC | 4 cut(s) | 3010, 3405, 3573, 3687 |
| BseBI | CCWGG | 4 cut(s) | 1241, 1392, 1515, 2585 |
| BseCI | ATCGAT | 2 cut(s) | 630, 3862 |
| BseDI | CCNNGG | 9 cut(s) | 1239, 1391, 1554, 1696, 2412, 2801, 3740, 3786, 3787 |
| BseJI | GATNNNNATC | 4 cut(s) | 3010, 3405, 3573, 3687 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 164, 1061, 1560, 2041, 2918, 3518, 3741 |
| BseMI | GCAATG | 4 cut(s) | 1046, 1536, 1571, 2441 |
| BseMII | CTCAG | 6 cut(s) | 759, 2184, 2783, 2838, 3153, 3219 |
| BseNI | ACTGG | 6 cut(s) | 1027, 1896, 2446, 2525, 2671, 2961 |
| BseRI | GAGGAG | 3 cut(s) | 1832, 2189, 2757 |
| BseSI | GKGCMC | 1 cut(s) | 2284 |
| BsgI | GTGCAG | 3 cut(s) | 962, 1359, 3222 |
| Bsh1236I | CGCG | 1 cut(s) | 3832 |
| BshFI | GGCC | 3 cut(s) | 1201, 2282, 3253 |
| BshNI | GGYRCC | 1 cut(s) | 3128 |
| BshVI | ATCGAT | 2 cut(s) | 630, 3862 |
| BsiHKAI | GWGCWC | 2 cut(s) | 12, 2211 |
| BsiHKCI | CYCGRG | 1 cut(s) | 3787 |
| BsiSI | CCGG | 4 cut(s) | 3132, 3467, 3650, 3788 |
| BslFI | GGGAC | 6 cut(s) | 1149, 2961, 3203, 3339, 3632, 3804 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 164, 1061, 1560, 2041, 2918, 3518, 3741 |
| BsmFI | GGGAC | 6 cut(s) | 1149, 2961, 3203, 3339, 3632, 3804 |
| BsmI | GAATGC | 5 cut(s) | 744, 961, 1045, 2059, 3458 |
| BsnI | GGCC | 3 cut(s) | 1201, 2282, 3253 |
| Bso31I | GGTCTC | 1 cut(s) | 1659 |
| BsoBI | CYCGRG | 1 cut(s) | 3787 |
| Bsp120I | GGGCCC | 1 cut(s) | 2280 |
| Bsp1286I | GDGCHC | 3 cut(s) | 12, 2211, 2284 |
| Bsp1407I | TGTACA | 2 cut(s) | 1606, 3145 |
| Bsp19I | CCATGG | 1 cut(s) | 2412 |
| BspACI | CCGC | 3 cut(s) | 125, 1223, 3830 |
| BspANI | GGCC | 3 cut(s) | 1201, 2282, 3253 |
| BspCNI | CTCAG | 6 cut(s) | 760, 2183, 2782, 2839, 3154, 3220 |
| BspDI | ATCGAT | 2 cut(s) | 630, 3862 |
| BspFNI | CGCG | 1 cut(s) | 3832 |
| BspHI | TCATGA | 1 cut(s) | 547 |
| BspLI | GGNNCC | 7 cut(s) | 1066, 1165, 2282, 2756, 2949, 3130, 3648 |
| BspMAI | CTGCAG | 2 cut(s) | 1853, 3380 |
| BspMI | ACCTGC | 2 cut(s) | 2871, 3692 |
| BspPI | GGATC | 4 cut(s) | 1264, 1892, 3077, 3585 |
| BspQI | GCTCTTC | 1 cut(s) | 1738 |
| BspT107I | GGYRCC | 1 cut(s) | 3128 |
| BspTI | CTTAAG | 2 cut(s) | 986, 1802 |
| BspTNI | GGTCTC | 1 cut(s) | 1659 |
| BsrDI | GCAATG | 4 cut(s) | 1046, 1536, 1571, 2441 |
| BsrGI | TGTACA | 2 cut(s) | 1606, 3145 |
| BsrI | ACTGG | 6 cut(s) | 1027, 1896, 2446, 2525, 2671, 2961 |
| BssECI | CCNNGG | 9 cut(s) | 1239, 1391, 1554, 1696, 2412, 2801, 3740, 3786, 3787 |
| BssNAI | GTATAC | 2 cut(s) | 1797, 3869 |
| BssSI | CACGAG | 2 cut(s) | 789, 3525 |
| BssT1I | CCWWGG | 5 cut(s) | 1554, 1696, 2412, 2801, 3740 |
| Bst1107I | GTATAC | 2 cut(s) | 1797, 3869 |
| Bst2BI | CACGAG | 2 cut(s) | 789, 3525 |
| Bst2UI | CCWGG | 4 cut(s) | 1241, 1392, 1515, 2585 |
| Bst6I | CTCTTC | 2 cut(s) | 1738, 3483 |
| BstAFI | CTTAAG | 2 cut(s) | 986, 1802 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 2037, 2399, 2478 |
| BstAUI | TGTACA | 2 cut(s) | 1606, 3145 |
| BstDSI | CCRYGG | 1 cut(s) | 2412 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 162, 3516 |
| BstFNI | CGCG | 1 cut(s) | 3832 |
| BstH2I | RGCGCY | 1 cut(s) | 2002 |
| BstHHI | GCGC | 1 cut(s) | 2001 |
| BstNI | CCWGG | 4 cut(s) | 1241, 1392, 1515, 2585 |
| BstNSI | RCATGY | 7 cut(s) | 2399, 2574, 2665, 2726, 3828, 3843, 3858 |
| BstSCI | CCNGG | 7 cut(s) | 1239, 1390, 1513, 2583, 3648, 3786, 3787 |
| BstSFI | CTRYAG | 3 cut(s) | 1269, 1849, 3376 |
| BstSLI | GKGCMC | 1 cut(s) | 2284 |
| BstUI | CGCG | 1 cut(s) | 3832 |
| BstV2I | GAAGAC | 5 cut(s) | 175, 1389, 1778, 3025, 3678 |
| BstX2I | RGATCY | 4 cut(s) | 1502, 1897, 3503, 3590 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 1465, 3725 |
| BstYI | RGATCY | 4 cut(s) | 1502, 1897, 3503, 3590 |
| BstZ17I | GTATAC | 2 cut(s) | 1797, 3869 |
| Bsu15I | ATCGAT | 2 cut(s) | 630, 3862 |
| Bsu36I | CCTNAGG | 1 cut(s) | 2259 |
| BsuI | GTATCC | 1 cut(s) | 2979 |
| BsuRI | GGCC | 3 cut(s) | 1201, 2282, 3253 |
| BsuTUI | ATCGAT | 2 cut(s) | 630, 3862 |
| BtgI | CCRYGG | 1 cut(s) | 2412 |
| BtrI | CACGTC | 1 cut(s) | 707 |
| BtsI | GCAGTG | 4 cut(s) | 611, 844, 953, 3385 |
| BveI | ACCTGC | 2 cut(s) | 2871, 3692 |
| CaiI | CAGNNNCTG | 2 cut(s) | 425, 2831 |
| CciI | TCATGA | 1 cut(s) | 547 |
| CfoI | GCGC | 1 cut(s) | 2001 |
| Cfr13I | GGNCC | 7 cut(s) | 155, 1163, 2280, 2281, 2948, 3521, 3646 |
| Cfr9I | CCCGGG | 1 cut(s) | 3787 |
| ClaI | ATCGAT | 2 cut(s) | 630, 3862 |
| CseI | GACGC | 1 cut(s) | 3140 |
| Csp6I | GTAC | 5 cut(s) | 983, 1607, 3129, 3146, 3489 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2258, 2293 |
| CviQI | GTAC | 5 cut(s) | 983, 1607, 3129, 3146, 3489 |
| DraI | TTTAAA | 1 cut(s) | 2227 |
| DraIII | CACNNNGTG | 2 cut(s) | 1679, 3200 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 3027 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 3027 |
| Eam1104I | CTCTTC | 2 cut(s) | 1738, 3483 |
| EarI | CTCTTC | 2 cut(s) | 1738, 3483 |
| Ecl136II | GAGCTC | 1 cut(s) | 2209 |
| Eco130I | CCWWGG | 5 cut(s) | 1554, 1696, 2412, 2801, 3740 |
| Eco24I | GRGCYC | 2 cut(s) | 2211, 2284 |
| Eco31I | GGTCTC | 1 cut(s) | 1659 |
| Eco32I | GATATC | 1 cut(s) | 888 |
| Eco47I | GGWCC | 5 cut(s) | 155, 1163, 2948, 3521, 3646 |
| Eco47III | AGCGCT | 1 cut(s) | 2000 |
| Eco53kI | GAGCTC | 1 cut(s) | 2209 |
| Eco57I | CTGAAG | 5 cut(s) | 219, 234, 890, 1668, 2310 |
| Eco81I | CCTNAGG | 1 cut(s) | 2259 |
| Eco88I | CYCGRG | 1 cut(s) | 3787 |
| EcoICRI | GAGCTC | 1 cut(s) | 2209 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 162, 3516 |
| EcoO109I | RGGNCCY | 3 cut(s) | 155, 2281, 3521 |
| EcoRI | GAATTC | 3 cut(s) | 1292, 3216, 3443 |
| EcoRII | CCWGG | 4 cut(s) | 1239, 1390, 1513, 2583 |
| EcoRV | GATATC | 1 cut(s) | 888 |
| EcoT14I | CCWWGG | 5 cut(s) | 1554, 1696, 2412, 2801, 3740 |
| EcoT22I | ATGCAT | 2 cut(s) | 2572, 2663 |
| EcoT38I | GRGCYC | 2 cut(s) | 2211, 2284 |
| ErhI | CCWWGG | 5 cut(s) | 1554, 1696, 2412, 2801, 3740 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 2594, 2626, 3440, 3472 |
| FaqI | GGGAC | 6 cut(s) | 1149, 2961, 3203, 3339, 3632, 3804 |
| FauI | CCCGC | 1 cut(s) | 3837 |
| FauNDI | CATATG | 1 cut(s) | 357 |
| FbaI | TGATCA | 1 cut(s) | 1666 |
| FblI | GTMKAC | 4 cut(s) | 366, 1137, 1796, 3868 |
| FriOI | GRGCYC | 2 cut(s) | 2211, 2284 |
| GlaI | GCGC | 1 cut(s) | 2000 |
| GsuI | CTGGAG | 2 cut(s) | 1019, 3341 |
| HaeII | RGCGCY | 1 cut(s) | 2002 |
| HaeIII | GGCC | 3 cut(s) | 1201, 2282, 3253 |
| HapII | CCGG | 4 cut(s) | 3132, 3467, 3650, 3788 |
| HgaI | GACGC | 1 cut(s) | 3140 |
| HhaI | GCGC | 1 cut(s) | 2001 |
| Hin6I | GCGC | 1 cut(s) | 1999 |
| HinP1I | GCGC | 1 cut(s) | 1999 |
| HincII | GTYRAC | 4 cut(s) | 754, 1003, 1138, 2864 |
| HindII | GTYRAC | 4 cut(s) | 754, 1003, 1138, 2864 |
| HindIII | AAGCTT | 3 cut(s) | 1974, 2292, 3628 |
| HpaII | CCGG | 4 cut(s) | 3132, 3467, 3650, 3788 |
| HphI | GGTGA | 6 cut(s) | 98, 188, 1601, 2801, 2918, 3481 |
| Hpy99I | CGWCG | 2 cut(s) | 711, 1221 |
| HpyCH4IV | ACGT | 6 cut(s) | 306, 706, 922, 2101, 2989, 3103 |
| HpySE526I | ACGT | 6 cut(s) | 306, 706, 922, 2101, 2989, 3103 |
| HspAI | GCGC | 1 cut(s) | 1999 |
| KpnI | GGTACC | 1 cut(s) | 3132 |
| Ksp22I | TGATCA | 1 cut(s) | 1666 |
| LguI | GCTCTTC | 1 cut(s) | 1738 |
| LmnI | GCTCC | 6 cut(s) | 15, 230, 1941, 2176, 2760, 2770 |
| MaeII | ACGT | 6 cut(s) | 306, 706, 922, 2101, 2989, 3103 |
| MaeIII | GTNAC | 5 cut(s) | 337, 2165, 2924, 3120, 3257 |
| MfeI | CAATTG | 4 cut(s) | 254, 3483, 3677, 3812 |
| MflI | RGATCY | 4 cut(s) | 1502, 1897, 3503, 3590 |
| MhlI | GDGCHC | 3 cut(s) | 12, 2211, 2284 |
| MlyI | GAGTC | 8 cut(s) | 416, 431, 998, 1280, 1970, 3185, 3345, 3786 |
| MmeI | TCCRAC | 4 cut(s) | 13, 117, 715, 2293 |
| Mph1103I | ATGCAT | 2 cut(s) | 2572, 2663 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1662, 3411 |
| MspCI | CTTAAG | 2 cut(s) | 986, 1802 |
| MspI | CCGG | 4 cut(s) | 3132, 3467, 3650, 3788 |
| MspR9I | CCNGG | 7 cut(s) | 1241, 1392, 1515, 2585, 3650, 3788, 3789 |
| MunI | CAATTG | 4 cut(s) | 254, 3483, 3677, 3812 |
| Mva1269I | GAATGC | 5 cut(s) | 744, 961, 1045, 2059, 3458 |
| MvaI | CCWGG | 4 cut(s) | 1241, 1392, 1515, 2585 |
| MvnI | CGCG | 1 cut(s) | 3832 |
| NciI | CCSGG | 3 cut(s) | 3650, 3788, 3789 |
| NcoI | CCATGG | 1 cut(s) | 2412 |
| NdeI | CATATG | 1 cut(s) | 357 |
| NlaIV | GGNNCC | 7 cut(s) | 1066, 1165, 2282, 2756, 2949, 3130, 3648 |
| NmeAIII | GCCGAG | 1 cut(s) | 3279 |
| NmuCI | GTSAC | 3 cut(s) | 2165, 2924, 3120 |
| NsiI | ATGCAT | 2 cut(s) | 2572, 2663 |
| NspI | RCATGY | 7 cut(s) | 2399, 2574, 2665, 2726, 3828, 3843, 3858 |
| OliI | CACNNNNGTG | 1 cut(s) | 1662 |
| PaeI | GCATGC | 2 cut(s) | 2665, 3828 |
| PagI | TCATGA | 1 cut(s) | 547 |
| PaqCI | CACCTGC | 1 cut(s) | 3692 |
| PciI | ACATGT | 2 cut(s) | 2395, 3854 |
| PciSI | GCTCTTC | 1 cut(s) | 1738 |
| PctI | GAATGC | 5 cut(s) | 744, 961, 1045, 2059, 3458 |
| PfeI | GAWTC | 5 cut(s) | 89, 446, 1247, 1265, 3683 |
| PflFI | GACNNNGTC | 1 cut(s) | 3024 |
| PleI | GAGTC | 8 cut(s) | 415, 430, 998, 1280, 1969, 3185, 3344, 3786 |
| PpsI | GAGTC | 8 cut(s) | 415, 430, 998, 1280, 1969, 3185, 3344, 3786 |
| PpuMI | RGGWCCY | 2 cut(s) | 155, 3521 |
| PscI | ACATGT | 2 cut(s) | 2395, 3854 |
| Psp124BI | GAGCTC | 1 cut(s) | 2211 |
| Psp1406I | AACGTT | 1 cut(s) | 922 |
| Psp5II | RGGWCCY | 2 cut(s) | 155, 3521 |
| Psp6I | CCWGG | 4 cut(s) | 1239, 1390, 1513, 2583 |
| PspGI | CCWGG | 4 cut(s) | 1239, 1390, 1513, 2583 |
| PspN4I | GGNNCC | 7 cut(s) | 1066, 1165, 2282, 2756, 2949, 3130, 3648 |
| PspOMI | GGGCCC | 1 cut(s) | 2280 |
| PspPI | GGNCC | 7 cut(s) | 155, 1163, 2280, 2281, 2948, 3521, 3646 |
| PspPPI | RGGWCCY | 2 cut(s) | 155, 3521 |
| PstI | CTGCAG | 2 cut(s) | 1853, 3380 |
| PstNI | CAGNNNCTG | 2 cut(s) | 425, 2831 |
| PsuI | RGATCY | 4 cut(s) | 1502, 1897, 3503, 3590 |
| PsyI | GACNNNGTC | 1 cut(s) | 3024 |
| RsaI | GTAC | 5 cut(s) | 984, 1608, 3130, 3147, 3490 |
| RsaNI | GTAC | 5 cut(s) | 983, 1607, 3129, 3146, 3489 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1662, 3411 |
| SacI | GAGCTC | 1 cut(s) | 2211 |
| SalI | GTCGAC | 1 cut(s) | 1136 |
| SapI | GCTCTTC | 1 cut(s) | 1738 |
| Sau96I | GGNCC | 7 cut(s) | 155, 1163, 2280, 2281, 2948, 3521, 3646 |
| ScaI | AGTACT | 1 cut(s) | 984 |
| SchI | GAGTC | 8 cut(s) | 416, 431, 998, 1280, 1970, 3185, 3345, 3786 |
| ScrFI | CCNGG | 7 cut(s) | 1241, 1392, 1515, 2585, 3650, 3788, 3789 |
| SduI | GDGCHC | 3 cut(s) | 12, 2211, 2284 |
| SfcI | CTRYAG | 3 cut(s) | 1269, 1849, 3376 |
| SinI | GGWCC | 5 cut(s) | 155, 1163, 2948, 3521, 3646 |
| SmaI | CCCGGG | 1 cut(s) | 3789 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1662, 3411 |
| SmlI | CTYRAG | 3 cut(s) | 986, 1802, 3580 |
| SmoI | CTYRAG | 3 cut(s) | 986, 1802, 3580 |
| SpeI | ACTAGT | 2 cut(s) | 997, 1154 |
| SphI | GCATGC | 2 cut(s) | 2665, 3828 |
| SsiI | CCGC | 3 cut(s) | 125, 1223, 3830 |
| SspI | AATATT | 2 cut(s) | 563, 748 |
| SstI | GAGCTC | 1 cut(s) | 2211 |
| StyD4I | CCNGG | 7 cut(s) | 1239, 1390, 1513, 2583, 3648, 3786, 3787 |
| StyI | CCWWGG | 5 cut(s) | 1554, 1696, 2412, 2801, 3740 |
| TaiI | ACGT | 6 cut(s) | 309, 709, 925, 2104, 2992, 3106 |
| TaqII | GACCGA | 1 cut(s) | 1707 |
| TatI | WGTACW | 3 cut(s) | 982, 1606, 3145 |
| TauI | GCSGC | 1 cut(s) | 128 |
| TfiI | GAWTC | 5 cut(s) | 89, 446, 1247, 1265, 3683 |
| TseFI | GTSAC | 3 cut(s) | 2165, 2924, 3120 |
| Tsp45I | GTSAC | 3 cut(s) | 2165, 2924, 3120 |
| TspGWI | ACGGA | 1 cut(s) | 1919 |
| TspMI | CCCGGG | 1 cut(s) | 3787 |
| Tth111I | GACNNNGTC | 1 cut(s) | 3024 |
| Vha464I | CTTAAG | 2 cut(s) | 986, 1802 |
| VpaK11BI | GGWCC | 5 cut(s) | 155, 1163, 2948, 3521, 3646 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 162, 3516 |
| XapI | RAATTY | 8 cut(s) | 635, 812, 904, 1292, 1783, 3046, 3216, 3443 |
| XbaI | TCTAGA | 1 cut(s) | 3179 |
| XceI | RCATGY | 7 cut(s) | 2399, 2574, 2665, 2726, 3828, 3843, 3858 |
| XmaI | CCCGGG | 1 cut(s) | 3787 |
| XmiI | GTMKAC | 4 cut(s) | 366, 1137, 1796, 3868 |
| ZrmI | AGTACT | 1 cut(s) | 984 |
| Zsp2I | ATGCAT | 2 cut(s) | 2572, 2663 |