AT2G23790

uniporter activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
OG0011209
Physical Location & Seq
Reverse (-)
10125367 .. 10127589
2223 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G23790.1

Sequence Viewer

Length: 1011 bp
ATGGCGATGAGGAAGCTTTTATCGAAGAAACTCTTCAATATCACGAATGTTGCTTCACAGAGTCTTATGAATTGTCGCATTTCGTCTTCTTCGTTAGCCGTACGAACCAGAGTTCCGAATGATTCAACAGATACAACCAAAATCGCACCGGAGCCTGGAGATTTGGCGATGTCGCGAAGGTTCATGCATAACAGTGCTATGATTAGGCCGGCGGAGATTATGCAGATGCCGGTGGGAGAGAGTTTGATTGAGAAACTCCGTGAGATTGATGGAAGCAAGGATCGGATTCGATTAGACGGACTTTCTCCGCCGGAGAGGGAGACGAGTTTGACGGTGGCGGATACGAAGAAGCTGCTTAGAGCGGCGCAGATCGAGATTGTGAAATCGAAGCTAAGAGAAACGGGAAGAAGCTGGATGCCGTATAAGGAGTTTGTTAGCGTTTGTGGTGAAGCTTCTTCAGATCCAGATCTCGGATCTAAAATCGCGAAGATGCTTGATGATTCAGCAAACGTCATCGTTTTGGGAGATTCCGTTTGTATTAGACCTGATCAGGTTACCAAATCCATTGAAGGACTGCTTCCTTTGCCAAAGATCCATAACCCAAATGACCCTCGGAGAATCGAGTTTAAAGAGCTTGAAGCTGAAAAGGCAGTGATCGATGTGAAAGCTCACACTTTGGTGCGGAAAGAGCTTTGGGCTGGTCTCGGTTACTTGATCCTACAGACTGCGGGGTTCATGAGGCTAACGTTTTGGGAACTCTCGTGGGACGTGATGGAGCCAATCTGTTTCTATGTCACGTCCGTGTACTTTATGGCTGGTTACGCGTTTTTCCTCAGGACATCGAAAGAGCCTTCTTTTGAAGGGTTTTACCAAAGCAGGTTCGAGGCGAAACAGAGAAAGTTGATGAATGAGTATGAGTTTGATCTGGAGAGGTATAATGAACTGAAGAAGCTGTTTTGCTCTAAGCCTTCGGATCATGTTTCCAAGATTCTTGGAGCTATCAAGAGTTAA

Protein Analysis

336

Amino Acids

38.18

Weight (kDa)

8.92

Isoelectric Point (pI)

49.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MCU PF04678 156 - 315 6.2e-52 Mitochondrial calcium uniporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0011209)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G23790 AT4G36820 AT5G66650
fragaria_vesca FvH4_1g14090
malus_domestica MD02G1155000.v1.1 MD15G1269400.v1.1 MD15G1269500.v1.1
prunus_persica Prupe.7G148300_v2.0.a1
pyrus_communis pycom02g12270 pycom15g23380
rosa_chinensis RchiOBHm_Chr2g0102751
rosa_laevigata RLG00000017177
rosa_multiflora Rmu_co8164376.1_g000001
rosa_roxburghii Rroxscaffold_2G00140340
rosa_rugosa Rorug02G0109400
rosa_samantha Rh2AG157700 Rh2BG164200 Rh2CG163900 Rh2DG163000
rosa_wichuraiana Rw2G012230

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 867
AccBSI CCGCTC 1 cut(s) 362
AccII CGCG 3 cut(s) 175, 485, 824
AciI CCGC 6 cut(s) 212, 308, 338, 362, 682, 728
AclI AACGTT 1 cut(s) 746
AclWI GGATC 6 cut(s) 288, 455, 481, 586, 709, 981
AcuI CTGAAG 2 cut(s) 441, 965
AfaI GTAC 2 cut(s) 102, 806
AfiI CCNNNNNNNGG 2 cut(s) 155, 470
AflIII ACRYGT 1 cut(s) 822
AgsI TTSAA 5 cut(s) 37, 126, 569, 638, 860
AjiI CACGTC 2 cut(s) 769, 798
AjnI CCWGG 1 cut(s) 154
AleI CACNNNNGTG 2 cut(s) 677, 800
AloI GAACNNNNNNTCC 2 cut(s) 97, 129
Alw26I GTCTC 2 cut(s) 314, 707
AlwI GGATC 6 cut(s) 288, 455, 481, 586, 709, 981
AoxI GGCC 1 cut(s) 206
ApeKI GCWGC 1 cut(s) 352
Asp700I GAANNNNTTC 1 cut(s) 32
AspLEI GCGC 1 cut(s) 367
AsuHPI GGTGA 1 cut(s) 458
AxyI CCTNAGG 1 cut(s) 833
BauI CACGAG 1 cut(s) 760
BbsI GAAGAC 1 cut(s) 78
BbvI GCAGC 1 cut(s) 339
BccI CCATC 2 cut(s) 263, 766
BceAI ACGGC 2 cut(s) 83, 403
BcgI CGANNNNNNTGC 2 cut(s) 334, 368
BciT130I CCWGG 1 cut(s) 156
BciVI GTATCC 1 cut(s) 334
BclI TGATCA 1 cut(s) 547
BcoDI GTCTC 2 cut(s) 314, 707
BfmI CTRYAG 1 cut(s) 719
BfuAI ACCTGC 1 cut(s) 867
BfuI GTATCC 1 cut(s) 334
BglII AGATCT 1 cut(s) 466
BisI GCNGC 2 cut(s) 353, 363
BlsI GCNGC 2 cut(s) 354, 364
Bme1390I CCNGG 1 cut(s) 156
BmgBI CACGTC 2 cut(s) 769, 798
BmiI GGNNCC 2 cut(s) 153, 777
BmrFI CCNGG 1 cut(s) 156
BmsI GCATC 3 cut(s) 216, 405, 480
BpiI GAAGAC 1 cut(s) 78
BpmI CTGGAG 2 cut(s) 177, 947
Bsa29I ATCGAT 1 cut(s) 657
BsaBI GATNNNNATC 1 cut(s) 465
BsaI GGTCTC 1 cut(s) 707
BsaJI CCNNGG 1 cut(s) 611
BsaWI WCCGGW 1 cut(s) 148
BsaXI ACNNNNNCTCC 2 cut(s) 516, 546
Bsc4I CCNNNNNNNGG 2 cut(s) 155, 470
Bse118I RCCGGY 2 cut(s) 208, 229
Bse21I CCTNAGG 1 cut(s) 833
Bse8I GATNNNNATC 1 cut(s) 465
BseBI CCWGG 1 cut(s) 156
BseCI ATCGAT 1 cut(s) 657
BseDI CCNNGG 1 cut(s) 611
BseGI GGATG 1 cut(s) 420
BseJI GATNNNNATC 1 cut(s) 465
BseLI CCNNNNNNNGG 2 cut(s) 155, 470
BseMII CTCAG 1 cut(s) 847
BseXI GCAGC 1 cut(s) 339
Bsh1236I CGCG 3 cut(s) 175, 485, 824
BshFI GGCC 1 cut(s) 208
BshVI ATCGAT 1 cut(s) 657
BsiSI CCGG 4 cut(s) 149, 209, 230, 311
BsiWI CGTACG 1 cut(s) 100
BslFI GGGAC 1 cut(s) 779
BslI CCNNNNNNNGG 2 cut(s) 155, 470
BsmAI GTCTC 2 cut(s) 314, 707
BsmBI CGTCTC 1 cut(s) 314
BsmFI GGGAC 1 cut(s) 779
BsnI GGCC 1 cut(s) 208
Bso31I GGTCTC 1 cut(s) 707
Bsp68I TCGCGA 2 cut(s) 175, 485
BspACI CCGC 6 cut(s) 212, 308, 338, 362, 682, 728
BspANI GGCC 1 cut(s) 208
BspCNI CTCAG 1 cut(s) 846
BspDI ATCGAT 1 cut(s) 657
BspFNI CGCG 3 cut(s) 175, 485, 824
BspHI TCATGA 1 cut(s) 735
BspLI GGNNCC 2 cut(s) 153, 777
BspMI ACCTGC 1 cut(s) 867
BspPI GGATC 6 cut(s) 288, 455, 481, 586, 709, 981
BspTNI GGTCTC 1 cut(s) 707
BsrBI CCGCTC 1 cut(s) 362
BsrFI RCCGGY 2 cut(s) 208, 229
BssAI RCCGGY 2 cut(s) 208, 229
BssECI CCNNGG 1 cut(s) 611
BssSI CACGAG 1 cut(s) 760
Bst2BI CACGAG 1 cut(s) 760
Bst2UI CCWGG 1 cut(s) 156
Bst4CI ACNGT 2 cut(s) 194, 334
Bst6I CTCTTC 1 cut(s) 38
BstC8I GCNNGC 1 cut(s) 210
BstDEI CTNAG 4 cut(s) 356, 392, 833, 963
BstEII GGTNACC 1 cut(s) 553
BstF5I GGATG 1 cut(s) 420
BstFNI CGCG 3 cut(s) 175, 485, 824
BstHHI GCGC 1 cut(s) 367
BstMAI GTCTC 2 cut(s) 314, 707
BstMWI GCNNNNNNNGC 4 cut(s) 583, 647, 688, 821
BstNI CCWGG 1 cut(s) 156
BstPI GGTNACC 1 cut(s) 553
BstSCI CCNGG 1 cut(s) 154
BstSFI CTRYAG 1 cut(s) 719
BstUI CGCG 3 cut(s) 175, 485, 824
BstV1I GCAGC 1 cut(s) 339
BstV2I GAAGAC 1 cut(s) 78
BstX2I RGATCY 4 cut(s) 460, 466, 473, 591
BstYI RGATCY 4 cut(s) 460, 466, 473, 591
Bsu15I ATCGAT 1 cut(s) 657
Bsu36I CCTNAGG 1 cut(s) 833
BsuI GTATCC 1 cut(s) 334
BsuRI GGCC 1 cut(s) 208
BsuTUI ATCGAT 1 cut(s) 657
BtgZI GCGATG 2 cut(s) 20, 182
BtrI CACGTC 2 cut(s) 769, 798
BtsCI GGATG 1 cut(s) 420
BtsI GCAGTG 1 cut(s) 657
BtsIMutI CAGTG 2 cut(s) 199, 657
BtuMI TCGCGA 2 cut(s) 175, 485
BveI ACCTGC 1 cut(s) 867
Cac8I GCNNGC 1 cut(s) 210
CciI TCATGA 1 cut(s) 735
CfoI GCGC 1 cut(s) 367
Cfr10I RCCGGY 2 cut(s) 208, 229
ClaI ATCGAT 1 cut(s) 657
Csp6I GTAC 2 cut(s) 101, 805
CviAII CATG 3 cut(s) 184, 736, 977
CviQI GTAC 2 cut(s) 101, 805
DdeI CTNAG 4 cut(s) 356, 392, 833, 963
DraI TTTAAA 1 cut(s) 628
Eam1104I CTCTTC 1 cut(s) 38
EarI CTCTTC 1 cut(s) 38
EciI GGCGGA 3 cut(s) 227, 297, 353
Eco31I GGTCTC 1 cut(s) 707
Eco57I CTGAAG 2 cut(s) 441, 965
Eco81I CCTNAGG 1 cut(s) 833
Eco91I GGTNACC 1 cut(s) 553
EcoO65I GGTNACC 1 cut(s) 553
EcoRII CCWGG 1 cut(s) 154
EcoT22I ATGCAT 1 cut(s) 189
Esp3I CGTCTC 1 cut(s) 314
FaeI CATG 3 cut(s) 187, 739, 980
FalI AAGNNNNNCTT 4 cut(s) 17, 49, 561, 593
FaqI GGGAC 1 cut(s) 779
FatI CATG 3 cut(s) 183, 735, 976
FauI CCCGC 1 cut(s) 721
FbaI TGATCA 1 cut(s) 547
Fnu4HI GCNGC 2 cut(s) 353, 363
FokI GGATG 1 cut(s) 427
Fsp4HI GCNGC 2 cut(s) 353, 363
GlaI GCGC 1 cut(s) 366
GluI GCNGC 2 cut(s) 353, 363
GsuI CTGGAG 2 cut(s) 177, 947
HaeIII GGCC 1 cut(s) 208
HapII CCGG 4 cut(s) 149, 209, 230, 311
HhaI GCGC 1 cut(s) 367
Hin1II CATG 3 cut(s) 187, 739, 980
Hin6I GCGC 1 cut(s) 365
HinP1I GCGC 1 cut(s) 365
HindIII AAGCTT 2 cut(s) 14, 450
HinfI GANTC 7 cut(s) 61, 122, 286, 500, 527, 618, 988
HpaII CCGG 4 cut(s) 149, 209, 230, 311
HphI GGTGA 1 cut(s) 458
Hpy166II GTNNAC 1 cut(s) 805
Hpy188I TCNGA 6 cut(s) 117, 285, 460, 473, 615, 973
Hpy188III TCNNGA 9 cut(s) 43, 174, 373, 464, 484, 736, 835, 926, 1003
Hpy8I GTNNAC 1 cut(s) 805
HpyAV CCTTC 5 cut(s) 171, 563, 854, 861, 978
HpyCH4III ACNGT 2 cut(s) 194, 334
HpyCH4IV ACGT 4 cut(s) 510, 746, 768, 797
HpyCH4V TGCA 2 cut(s) 187, 223
HpyF10VI GCNNNNNNNGC 4 cut(s) 583, 647, 688, 821
HpyF3I CTNAG 4 cut(s) 356, 392, 833, 963
HpySE526I ACGT 4 cut(s) 510, 746, 768, 797
Hsp92II CATG 3 cut(s) 187, 739, 980
HspAI GCGC 1 cut(s) 365
KroI GCCGGC 1 cut(s) 208
KroNI GCCGGC 1 cut(s) 210
Ksp22I TGATCA 1 cut(s) 547
LmnI GCTCC 3 cut(s) 151, 775, 995
Lsp1109I GCAGC 1 cut(s) 339
LweI GCATC 3 cut(s) 216, 405, 480
MaeII ACGT 4 cut(s) 510, 746, 768, 797
MaeIII GTNAC 4 cut(s) 553, 707, 793, 818
MbiI CCGCTC 1 cut(s) 362
MboII GAAGA 9 cut(s) 25, 37, 78, 81, 358, 417, 447, 499, 958
MflI RGATCY 4 cut(s) 460, 466, 473, 591
MluCI AATT 1 cut(s) 70
MluI ACGCGT 1 cut(s) 822
MlyI GAGTC 1 cut(s) 70
MnlI CCTC 7 cut(s) 3, 309, 621, 732, 842, 877, 924
Mph1103I ATGCAT 1 cut(s) 189
MroNI GCCGGC 1 cut(s) 208
MroXI GAANNNNTTC 1 cut(s) 32
MseI TTAA 2 cut(s) 627, 1009
MslI CAYNNNNRTG 3 cut(s) 192, 677, 800
MspI CCGG 4 cut(s) 149, 209, 230, 311
MspR9I CCNGG 1 cut(s) 156
MvaI CCWGG 1 cut(s) 156
MvnI CGCG 3 cut(s) 175, 485, 824
MwoI GCNNNNNNNGC 4 cut(s) 583, 647, 688, 821
NaeI GCCGGC 1 cut(s) 210
NgoMIV GCCGGC 1 cut(s) 208
NlaIII CATG 3 cut(s) 187, 739, 980
NlaIV GGNNCC 2 cut(s) 153, 777
NmuCI GTSAC 1 cut(s) 793
NruI TCGCGA 2 cut(s) 175, 485
NsiI ATGCAT 1 cut(s) 189
OliI CACNNNNGTG 2 cut(s) 677, 800
PagI TCATGA 1 cut(s) 735
PcsI WCGNNNNNNNCGW 1 cut(s) 89
PdiI GCCGGC 1 cut(s) 210
PdmI GAANNNNTTC 1 cut(s) 32
PfeI GAWTC 6 cut(s) 122, 286, 500, 527, 618, 988
Pfl23II CGTACG 1 cut(s) 100
PkrI GCNGC 2 cut(s) 354, 364
PleI GAGTC 1 cut(s) 69
PpsI GAGTC 1 cut(s) 69
Psp1406I AACGTT 1 cut(s) 746
Psp6I CCWGG 1 cut(s) 154
PspEI GGTNACC 1 cut(s) 553
PspGI CCWGG 1 cut(s) 154
PspLI CGTACG 1 cut(s) 100
PspN4I GGNNCC 2 cut(s) 153, 777
PsuI RGATCY 4 cut(s) 460, 466, 473, 591
RruI TCGCGA 2 cut(s) 175, 485
RsaI GTAC 2 cut(s) 102, 806
RsaNI GTAC 2 cut(s) 101, 805
RseI CAYNNNNRTG 3 cut(s) 192, 677, 800
SaqAI TTAA 2 cut(s) 627, 1009
SatI GCNGC 2 cut(s) 353, 363
SchI GAGTC 1 cut(s) 70
ScrFI CCNGG 1 cut(s) 156
SfaNI GCATC 3 cut(s) 216, 405, 480
SfcI CTRYAG 1 cut(s) 719
SmiMI CAYNNNNRTG 3 cut(s) 192, 677, 800
Sse9I AATT 1 cut(s) 70
SsiI CCGC 6 cut(s) 212, 308, 338, 362, 682, 728
StyD4I CCNGG 1 cut(s) 154
TaaI ACNGT 2 cut(s) 194, 334
TaiI ACGT 4 cut(s) 513, 749, 771, 800
TaqI TCGA 8 cut(s) 23, 289, 372, 386, 621, 657, 842, 882
TasI AATT 1 cut(s) 70
TatI WGTACW 1 cut(s) 804
TauI GCSGC 1 cut(s) 365
TfiI GAWTC 6 cut(s) 122, 286, 500, 527, 618, 988
Tru1I TTAA 2 cut(s) 627, 1009
Tru9I TTAA 2 cut(s) 627, 1009
TscAI CASTG 2 cut(s) 199, 657
TseFI GTSAC 1 cut(s) 793
TseI GCWGC 1 cut(s) 352
Tsp45I GTSAC 1 cut(s) 793
TspDTI ATGAA 5 cut(s) 83, 172, 724, 920, 954
TspGWI ACGGA 4 cut(s) 248, 312, 520, 790
TspRI CASTG 2 cut(s) 199, 657
XmnI GAANNNNTTC 1 cut(s) 32
Zsp2I ATGCAT 1 cut(s) 189
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.