Rroxscaffold_2G00140340

Mitochondrial calcium uniporter

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
Physical Location & Seq
Reverse (-)
78583114 .. 78585487
2374 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00140340.1

Sequence Viewer

Length: 1080 bp
ATGGCGTTCAAGAAAACCCTAGCTGAGCGCATCTTCAATATCTCCAAGATCTCGACCCAAACCCTCAGAAACTGCCGGATTTCCTCGTCGGCGGTGCATCTCCGGCTGGCGGCCAAACCTCGGGAGGCGAGCATCGCGCCCGAGCCGGGAGACAATGCCATTTTCCGGCGGTTCATTCACAGGAGGGCCGGCGTCGCGAAGCCGGAGATCTGGTCGGTCCCGATCGGCGAGAACCTGATGGAAAAGCTCAGATCCGTCGGCATTCCCGGAAGCCGGATTCGGTTGGACGGTTTGGCCCCGCCGGCTCAGGTGCCGGAGACGGAGAAGGTGTCTGCGCAGGCTGTCATGGCCGGACTGACGGCGGAGGAGACGAGGAAGTTGTTGAGGGTGGCGCAGATGGAGGCGGTGAAGGCGAACCTCCGGGAGGTGCGGAAAACGTGGGTGACGTATTCGGAGTTTGTTGGGATTTGCACGGAGGGTTGTTCGGATCCGGATCTGGGTCTCGGGTTTGCGAAATCGCTGGACGAGAGTGGCTCCGTTATCGTTTTGGGAAACGCCGTTTGCCTCAGACCTGCACAGGTAGCAAAAGCAATCCAGGACCTCATTCCCATCCCGGGGGCCACTCCAAACGATGCAAAAATGAAGGAGCTAGAAGACATGGAGAAACAGAAATCTCTAATAGACCAGAAAGCCGATTCCTTGGTGCGCAGGGAACTGTGGTTGGGGCTTGGCTATCTCGTTGTCCAAACAGCCGGGTTCATGAGGCTGACCTTTTGGGAACTCTCATGGGATGTGATGGAACCCATATGTTTCTATGTGACTTCAATGTACTTCATGGCTTGCTATGCCTTCTTCCTCAGGACCTCCAAAGAGCCCTCTTTCGAAGGCTTCTTCCAGAGCCGTTTTGATGCCAAGCAGAAGAAATTGATGAAGGATCACAATTTTGATTTGGGTAGATATGAGGAGCTTAGAAAAGCTTGTTACCCCTTCTCTTCTTCTTCGTTGGAGTTAGGCAACCCATCAACTGCTTTTGATGGAACTAAGAGGATGCAAATGAAGTTTGGTTCCAATGTTCTATAA

Protein Analysis

359

Amino Acids

40.21

Weight (kDa)

9.14

Isoelectric Point (pI)

47.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MCU PF04678 167 - 323 4e-52 Mitochondrial calcium uniporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011209)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 2 cut(s) 336, 707
Acc36I ACCTGC 1 cut(s) 580
AccB1I GGYRCC 1 cut(s) 310
AccII CGCG 2 cut(s) 137, 197
AccIII TCCGGA 1 cut(s) 490
AciI CCGC 7 cut(s) 92, 110, 169, 299, 362, 404, 430
AclWI GGATC 5 cut(s) 246, 482, 495, 501, 942
AcoI YGGCCR 2 cut(s) 111, 348
AcyI GRCGYC 1 cut(s) 192
AfaI GTAC 1 cut(s) 830
AfiI CCNNNNNNNGG 9 cut(s) 109, 120, 146, 165, 273, 424, 497, 614, 615
AgsI TTSAA 3 cut(s) 10, 37, 825
AjnI CCWGG 1 cut(s) 594
AluBI AGCT 5 cut(s) 23, 247, 649, 967, 977
AluI AGCT 5 cut(s) 23, 247, 649, 967, 977
Alw26I GTCTC 4 cut(s) 144, 311, 362, 506
AlwI GGATC 5 cut(s) 246, 482, 495, 501, 942
AlwNI CAGNNNCTG 1 cut(s) 72
Ama87I CYCGRG 4 cut(s) 120, 140, 503, 613
Aor13HI TCCGGA 1 cut(s) 490
AoxI GGCC 5 cut(s) 111, 186, 294, 348, 618
AspLEI GCGC 5 cut(s) 30, 139, 337, 394, 708
AspS9I GGNCC 6 cut(s) 186, 217, 295, 598, 618, 861
AsuC2I CCSGG 6 cut(s) 147, 267, 422, 614, 615, 754
AsuHPI GGTGA 2 cut(s) 418, 454
AsuII TTCGAA 1 cut(s) 882
AvaI CYCGRG 4 cut(s) 120, 140, 503, 613
AvaII GGWCC 3 cut(s) 217, 598, 861
AxyI CCTNAGG 1 cut(s) 857
BamHI GGATCC 1 cut(s) 487
BanI GGYRCC 1 cut(s) 310
BanII GRGCYC 1 cut(s) 876
BbsI GAAGAC 1 cut(s) 660
BccI CCATC 6 cut(s) 232, 391, 617, 790, 1027, 1028
BceAI ACGGC 3 cut(s) 375, 542, 885
BciT130I CCWGG 1 cut(s) 596
BcnI CCSGG 6 cut(s) 147, 267, 422, 614, 615, 754
BcoDI GTCTC 4 cut(s) 144, 311, 362, 506
BfaI CTAG 2 cut(s) 20, 650
BfuAI ACCTGC 1 cut(s) 580
BglI GCCNNNNNGGC 1 cut(s) 302
BglII AGATCT 2 cut(s) 48, 207
BisI GCNGC 1 cut(s) 111
BlpI GCTNAGC 1 cut(s) 24
BlsI GCNGC 1 cut(s) 112
Bme1390I CCNGG 7 cut(s) 147, 267, 422, 596, 614, 615, 754
Bme18I GGWCC 3 cut(s) 217, 598, 861
BmeT110I CYCGRG 4 cut(s) 120, 140, 503, 613
BmgT120I GGNCC 6 cut(s) 186, 217, 295, 598, 618, 861
BmiI GGNNCC 8 cut(s) 219, 297, 312, 489, 535, 619, 801, 1066
BmrFI CCNGG 7 cut(s) 147, 267, 422, 596, 614, 615, 754
BmsI GCATC 6 cut(s) 39, 106, 141, 622, 898, 1038
BpiI GAAGAC 1 cut(s) 660
BplI GAGNNNNNCTC 2 cut(s) 518, 550
Bpu10I CCTNAGC 1 cut(s) 306
Bpu1102I GCTNAGC 1 cut(s) 24
Bpu14I TTCGAA 1 cut(s) 882
BpuMI CCSGG 6 cut(s) 147, 267, 422, 614, 615, 754
BsaBI GATNNNNATC 1 cut(s) 492
BsaHI GRCGYC 1 cut(s) 192
BsaI GGTCTC 1 cut(s) 506
BsaJI CCNNGG 4 cut(s) 119, 613, 614, 699
BsaWI WCCGGW 1 cut(s) 490
BsaXI ACNNNNNCTCC 4 cut(s) 197, 227, 314, 344
Bsc4I CCNNNNNNNGG 9 cut(s) 109, 120, 146, 165, 273, 424, 497, 614, 615
Bse118I RCCGGY 2 cut(s) 188, 301
Bse21I CCTNAGG 1 cut(s) 857
Bse8I GATNNNNATC 1 cut(s) 492
BseAI TCCGGA 1 cut(s) 490
BseBI CCWGG 1 cut(s) 596
BseDI CCNNGG 4 cut(s) 119, 613, 614, 699
BseGI GGATG 3 cut(s) 609, 796, 1053
BseJI GATNNNNATC 1 cut(s) 492
BseLI CCNNNNNNNGG 9 cut(s) 109, 120, 146, 165, 273, 424, 497, 614, 615
BseMII CTCAG 6 cut(s) 15, 79, 262, 320, 580, 871
BseRI GAGGAG 2 cut(s) 380, 977
BsgI GTGCAG 1 cut(s) 558
Bsh1236I CGCG 2 cut(s) 137, 197
Bsh1285I CGRYCG 1 cut(s) 225
BshFI GGCC 5 cut(s) 113, 188, 296, 350, 620
BshNI GGYRCC 1 cut(s) 310
BsiEI CGRYCG 1 cut(s) 225
BsiHKCI CYCGRG 4 cut(s) 120, 140, 503, 613
BslFI GGGAC 1 cut(s) 203
BslI CCNNNNNNNGG 9 cut(s) 109, 120, 146, 165, 273, 424, 497, 614, 615
BsmAI GTCTC 4 cut(s) 144, 311, 362, 506
BsmBI CGTCTC 2 cut(s) 311, 362
BsmFI GGGAC 1 cut(s) 203
BsmI GAATGC 1 cut(s) 261
BsnI GGCC 5 cut(s) 113, 188, 296, 350, 620
Bso31I GGTCTC 1 cut(s) 506
BsoBI CYCGRG 4 cut(s) 120, 140, 503, 613
Bsp119I TTCGAA 1 cut(s) 882
Bsp1286I GDGCHC 1 cut(s) 876
Bsp13I TCCGGA 1 cut(s) 490
Bsp143I GATC 7 cut(s) 48, 207, 222, 251, 487, 493, 934
Bsp1720I GCTNAGC 1 cut(s) 24
Bsp68I TCGCGA 1 cut(s) 197
BspACI CCGC 7 cut(s) 92, 110, 169, 299, 362, 404, 430
BspANI GGCC 5 cut(s) 113, 188, 296, 350, 620
BspCNI CTCAG 6 cut(s) 16, 78, 261, 319, 579, 870
BspEI TCCGGA 1 cut(s) 490
BspFNI CGCG 2 cut(s) 137, 197
BspHI TCATGA 1 cut(s) 759
BspLI GGNNCC 8 cut(s) 219, 297, 312, 489, 535, 619, 801, 1066
BspMI ACCTGC 1 cut(s) 580
BspPI GGATC 5 cut(s) 246, 482, 495, 501, 942
BspT104I TTCGAA 1 cut(s) 882
BspT107I GGYRCC 1 cut(s) 310
BspTNI GGTCTC 1 cut(s) 506
BsrFI RCCGGY 2 cut(s) 188, 301
BssAI RCCGGY 2 cut(s) 188, 301
BssECI CCNNGG 4 cut(s) 119, 613, 614, 699
BssMI GATC 7 cut(s) 48, 207, 222, 251, 487, 493, 934
BssNI GRCGYC 1 cut(s) 192
BssT1I CCWWGG 1 cut(s) 699
Bst2UI CCWGG 1 cut(s) 596
Bst4CI ACNGT 2 cut(s) 290, 717
Bst6I CTCTTC 1 cut(s) 997
BstACI GRCGYC 1 cut(s) 192
BstBI TTCGAA 1 cut(s) 882
BstC8I GCNNGC 6 cut(s) 108, 130, 190, 303, 339, 841
BstDEI CTNAG 8 cut(s) 24, 65, 248, 306, 566, 857, 968, 1041
BstENI CCTNNNNNAGG 1 cut(s) 422
BstF5I GGATG 3 cut(s) 609, 796, 1053
BstFNI CGCG 2 cut(s) 137, 197
BstHHI GCGC 5 cut(s) 30, 139, 337, 394, 708
BstKTI GATC 7 cut(s) 51, 210, 225, 254, 490, 496, 937
BstMAI GTCTC 4 cut(s) 144, 311, 362, 506
BstMBI GATC 7 cut(s) 48, 207, 222, 251, 487, 493, 934
BstMCI CGRYCG 1 cut(s) 225
BstMWI GCNNNNNNNGC 8 cut(s) 103, 134, 194, 302, 347, 410, 581, 845
BstNI CCWGG 1 cut(s) 596
BstSCI CCNGG 7 cut(s) 145, 265, 420, 594, 612, 613, 752
BstUI CGCG 2 cut(s) 137, 197
BstV2I GAAGAC 1 cut(s) 660
BstX2I RGATCY 5 cut(s) 48, 207, 251, 487, 493
BstYI RGATCY 5 cut(s) 48, 207, 251, 487, 493
Bsu36I CCTNAGG 1 cut(s) 857
BsuRI GGCC 5 cut(s) 113, 188, 296, 350, 620
BtgZI GCGATG 1 cut(s) 118
BtsCI GGATG 3 cut(s) 609, 796, 1053
BtuMI TCGCGA 1 cut(s) 197
BveI ACCTGC 1 cut(s) 580
Cac8I GCNNGC 6 cut(s) 108, 130, 190, 303, 339, 841
CaiI CAGNNNCTG 1 cut(s) 72
CciI TCATGA 1 cut(s) 759
CfoI GCGC 5 cut(s) 30, 139, 337, 394, 708
Cfr10I RCCGGY 2 cut(s) 188, 301
Cfr13I GGNCC 6 cut(s) 186, 217, 295, 598, 618, 861
Cfr9I CCCGGG 1 cut(s) 613
CseI GACGC 1 cut(s) 181
Csp6I GTAC 1 cut(s) 829
CviAII CATG 5 cut(s) 346, 658, 760, 786, 835
CviQI GTAC 1 cut(s) 829
DdeI CTNAG 8 cut(s) 24, 65, 248, 306, 566, 857, 968, 1041
DpnI GATC 7 cut(s) 50, 209, 224, 253, 489, 495, 936
DpnII GATC 7 cut(s) 48, 207, 222, 251, 487, 493, 934
EaeI YGGCCR 2 cut(s) 111, 348
Eam1104I CTCTTC 1 cut(s) 997
EarI CTCTTC 1 cut(s) 997
EciI GGCGGA 1 cut(s) 377
Eco130I CCWWGG 1 cut(s) 699
Eco24I GRGCYC 1 cut(s) 876
Eco31I GGTCTC 1 cut(s) 506
Eco47I GGWCC 3 cut(s) 217, 598, 861
Eco81I CCTNAGG 1 cut(s) 857
Eco88I CYCGRG 4 cut(s) 120, 140, 503, 613
EcoNI CCTNNNNNAGG 1 cut(s) 422
EcoO109I RGGNCCY 2 cut(s) 598, 861
EcoRII CCWGG 1 cut(s) 594
EcoT14I CCWWGG 1 cut(s) 699
EcoT38I GRGCYC 1 cut(s) 876
ErhI CCWWGG 1 cut(s) 699
Esp3I CGTCTC 2 cut(s) 311, 362
FaeI CATG 5 cut(s) 349, 661, 763, 789, 838
FaqI GGGAC 1 cut(s) 203
FatI CATG 5 cut(s) 345, 657, 759, 785, 834
FauI CCCGC 1 cut(s) 306
FauNDI CATATG 1 cut(s) 806
Fnu4HI GCNGC 1 cut(s) 111
FokI GGATG 3 cut(s) 596, 803, 1060
FriOI GRGCYC 1 cut(s) 876
Fsp4HI GCNGC 1 cut(s) 111
FspBI CTAG 2 cut(s) 20, 650
FspI TGCGCA 2 cut(s) 336, 707
GlaI GCGC 5 cut(s) 29, 138, 336, 393, 707
GluI GCNGC 1 cut(s) 111
HaeIII GGCC 5 cut(s) 113, 188, 296, 350, 620
HgaI GACGC 1 cut(s) 181
HhaI GCGC 5 cut(s) 30, 139, 337, 394, 708
Hin1I GRCGYC 1 cut(s) 192
Hin1II CATG 5 cut(s) 349, 661, 763, 789, 838
Hin6I GCGC 5 cut(s) 28, 137, 335, 392, 706
HinP1I GCGC 5 cut(s) 28, 137, 335, 392, 706
HindIII AAGCTT 1 cut(s) 975
HinfI GANTC 2 cut(s) 277, 695
HphI GGTGA 2 cut(s) 418, 454
Hpy188I TCNGA 5 cut(s) 68, 251, 454, 487, 569
Hpy188III TCNNGA 9 cut(s) 10, 52, 122, 196, 220, 491, 760, 859, 895
Hpy99I CGWCG 3 cut(s) 91, 197, 260
HpyAV CCTTC 7 cut(s) 319, 403, 637, 859, 878, 925, 997
HpyCH4III ACNGT 2 cut(s) 290, 717
HpyCH4IV ACGT 2 cut(s) 437, 446
HpyCH4V TGCA 5 cut(s) 97, 471, 575, 635, 1051
HpyF10VI GCNNNNNNNGC 8 cut(s) 103, 134, 194, 302, 347, 410, 581, 845
HpyF3I CTNAG 8 cut(s) 24, 65, 248, 306, 566, 857, 968, 1041
HpySE526I ACGT 2 cut(s) 437, 446
Hsp92I GRCGYC 1 cut(s) 192
Hsp92II CATG 5 cut(s) 349, 661, 763, 789, 838
HspAI GCGC 5 cut(s) 28, 137, 335, 392, 706
Kpn2I TCCGGA 1 cut(s) 490
KroI GCCGGC 2 cut(s) 188, 301
KroNI GCCGGC 2 cut(s) 190, 303
Kzo9I GATC 7 cut(s) 48, 207, 222, 251, 487, 493, 934
LmnI GCTCC 3 cut(s) 539, 646, 964
LweI GCATC 6 cut(s) 39, 106, 141, 622, 898, 1038
MaeI CTAG 2 cut(s) 20, 650
MaeII ACGT 2 cut(s) 437, 446
MaeIII GTNAC 3 cut(s) 442, 817, 980
MalI GATC 7 cut(s) 50, 209, 224, 253, 489, 495, 936
MboI GATC 7 cut(s) 48, 207, 222, 251, 487, 493, 934
MboII GAAGA 8 cut(s) 25, 665, 844, 883, 931, 984, 987, 990
MflI RGATCY 5 cut(s) 48, 207, 251, 487, 493
MhlI GDGCHC 1 cut(s) 876
MluCI AATT 2 cut(s) 923, 940
MmeI TCCRAC 2 cut(s) 264, 984
MroI TCCGGA 1 cut(s) 490
MroNI GCCGGC 2 cut(s) 188, 301
MspR9I CCNGG 7 cut(s) 147, 267, 422, 596, 614, 615, 754
Mva1269I GAATGC 1 cut(s) 261
MvaI CCWGG 1 cut(s) 596
MvnI CGCG 2 cut(s) 137, 197
MwoI GCNNNNNNNGC 8 cut(s) 103, 134, 194, 302, 347, 410, 581, 845
NaeI GCCGGC 2 cut(s) 190, 303
NciI CCSGG 6 cut(s) 147, 267, 422, 614, 615, 754
NdeI CATATG 1 cut(s) 806
NdeII GATC 7 cut(s) 48, 207, 222, 251, 487, 493, 934
NgoMIV GCCGGC 2 cut(s) 188, 301
NlaIII CATG 5 cut(s) 349, 661, 763, 789, 838
NlaIV GGNNCC 8 cut(s) 219, 297, 312, 489, 535, 619, 801, 1066
NmuCI GTSAC 2 cut(s) 442, 817
NruI TCGCGA 1 cut(s) 197
NsbI TGCGCA 2 cut(s) 336, 707
NspV TTCGAA 1 cut(s) 882
PagI TCATGA 1 cut(s) 759
PcsI WCGNNNNNNNCGW 1 cut(s) 443
PctI GAATGC 1 cut(s) 261
PdiI GCCGGC 2 cut(s) 190, 303
PfeI GAWTC 2 cut(s) 277, 695
PfoI TCCNGGA 3 cut(s) 265, 420, 594
PkrI GCNGC 1 cut(s) 112
Ple19I CGATCG 1 cut(s) 225
PpuMI RGGWCCY 2 cut(s) 598, 861
Psp5II RGGWCCY 2 cut(s) 598, 861
Psp6I CCWGG 1 cut(s) 594
PspGI CCWGG 1 cut(s) 594
PspN4I GGNNCC 8 cut(s) 219, 297, 312, 489, 535, 619, 801, 1066
PspPI GGNCC 6 cut(s) 186, 217, 295, 598, 618, 861
PspPPI RGGWCCY 2 cut(s) 598, 861
PstNI CAGNNNCTG 1 cut(s) 72
PsuI RGATCY 5 cut(s) 48, 207, 251, 487, 493
PvuI CGATCG 1 cut(s) 225
RruI TCGCGA 1 cut(s) 197
RsaI GTAC 1 cut(s) 830
RsaNI GTAC 1 cut(s) 829
SatI GCNGC 1 cut(s) 111
Sau3AI GATC 7 cut(s) 48, 207, 222, 251, 487, 493, 934
Sau96I GGNCC 6 cut(s) 186, 217, 295, 598, 618, 861
ScrFI CCNGG 7 cut(s) 147, 267, 422, 596, 614, 615, 754
SduI GDGCHC 1 cut(s) 876
SfaNI GCATC 6 cut(s) 39, 106, 141, 622, 898, 1038
SfuI TTCGAA 1 cut(s) 882
SinI GGWCC 3 cut(s) 217, 598, 861
SmaI CCCGGG 1 cut(s) 615
Sse9I AATT 2 cut(s) 923, 940
SsiI CCGC 7 cut(s) 92, 110, 169, 299, 362, 404, 430
SspMI CTAG 2 cut(s) 20, 650
StyD4I CCNGG 7 cut(s) 145, 265, 420, 594, 612, 613, 752
StyI CCWWGG 1 cut(s) 699
TaaI ACNGT 2 cut(s) 290, 717
TaiI ACGT 2 cut(s) 440, 449
TaqI TCGA 2 cut(s) 53, 882
TaqII GACCGA 1 cut(s) 205
TasI AATT 2 cut(s) 923, 940
TatI WGTACW 1 cut(s) 828
TauI GCSGC 1 cut(s) 113
TfiI GAWTC 2 cut(s) 277, 695
TseFI GTSAC 2 cut(s) 442, 817
Tsp45I GTSAC 2 cut(s) 442, 817
TspDTI ATGAA 6 cut(s) 163, 656, 748, 823, 944, 1070
TspGWI ACGGA 4 cut(s) 244, 335, 488, 526
TspMI CCCGGG 1 cut(s) 613
VpaK11BI GGWCC 3 cut(s) 217, 598, 861
XagI CCTNNNNNAGG 1 cut(s) 422
XmaI CCCGGG 1 cut(s) 613
XspI CTAG 2 cut(s) 20, 650
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.