AT4G36820

uniporter activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
OG0011209
Physical Location & Seq
Forward (+)
17346805 .. 17348265
1461 bp
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UTR
Exon/CDS
Intron
AT4G36820.1

Sequence Viewer

Length: 1017 bp
ATGGTGATGATGAAGAAGCTTTTGTCGAACCGTTTGTTCAATATGTCAAAAACGGCGTCGCAAAGTCTCATGAACTGTCGTACTTCGTCTTCTTCTTCGTTAGCCATGCGAACTAGGGTTCCTAAAGATATAGGAGAAGCCACGATTGATCCAGAGCCTGGAGATTTGACGATTTCTCAGAGGTTTTTGAATAAATTCTCCATGAATGGGATTGATACGACTTCGAAGATGTCTATTGGGGAGAGTCTGATGGAGAAGCTTAAAGAAATGGATATGAACAAGGATCGGATTCGATTAGACGGACTTTCTCATCCGAAGGAGGAGACGTTAGGGCTTACTGTGCAAGACGTGAAGAAGTTGCTAAGAGCAGCAGAGATCGAAGTTATTAAAACGAAGCTGATGGAGACAGGAAAAATCTGGATTCGTTACTCAGATTTCTTAGGTGTTTGTAGTGATTCTTCTTTGGATCCTTCTCAAGGAGCTTTGATCGCTAAGATGCTTGATGATTCAGGAAACGTTATCGTTATGGGAAACTCTGTTTGTTTAAGACCTCATCAGTTAACCAAATCCATAGAGGGGCTTCTTCCTTTATCACAAATCCATAACCCGAATGACCCAAGAAGAAAGGAGCTAAATGAGCTTGAAGCTATAAAGACGGTCATTGACCAAAAAGCACATTCTTTGGTGAGAAGAGAGCTTTGGGCTGGTTTGGGTTACTTGATCATCCAAACCGCAGGGTTTATGAGGCTAACGTTTTGGGACCTGACATGGGATGTTATGGAACCGATCTGTTTCTATGTCTCATCGGTATATTTCATGGCGGGTTACACATTTTTCCTCAAGACATCGAGAGAGCCTTCCTTTCAAGGTTTTTACCAAAGCAGGTTTGAGGCTAAACAAAGGAAACTGATGCAATCTGAGGATTTTGATGTTGGGAGGTATGATGAGCTGAAAAAGCTGTTTAATCCCAAGCCTTCAGGTGCTGTTCCCAAGATTCTTGGATCTCTACAGAATTGA

Protein Analysis

338

Amino Acids

38.35

Weight (kDa)

8.99

Isoelectric Point (pI)

41.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MCU PF04678 159 - 317 3.8e-51 Mitochondrial calcium uniporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011209)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G23790 AT4G36820 AT5G66650
fragaria_vesca FvH4_1g14090
malus_domestica MD02G1155000.v1.1 MD15G1269400.v1.1 MD15G1269500.v1.1
prunus_persica Prupe.7G148300_v2.0.a1
pyrus_communis pycom02g12270 pycom15g23380
rosa_chinensis RchiOBHm_Chr2g0102751
rosa_laevigata RLG00000017177
rosa_multiflora Rmu_co8164376.1_g000001
rosa_roxburghii Rroxscaffold_2G00140340
rosa_rugosa Rorug02G0109400
rosa_samantha Rh2AG157700 Rh2BG164200 Rh2CG163900 Rh2DG163000
rosa_wichuraiana Rw2G012230

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 873
AccB7I CCANNNNNTGG 1 cut(s) 158
AciI CCGC 2 cut(s) 732, 821
AclI AACGTT 2 cut(s) 516, 752
AclWI GGATC 5 cut(s) 143, 291, 461, 474, 1009
AcsI RAATTY 1 cut(s) 194
AcuI CTGAAG 1 cut(s) 960
AcyI GRCGYC 1 cut(s) 56
AfaI GTAC 1 cut(s) 82
AfiI CCNNNNNNNGG 5 cut(s) 158, 207, 476, 576, 769
AgsI TTSAA 4 cut(s) 40, 190, 644, 866
AjiI CACGTC 1 cut(s) 349
AjnI CCWGG 1 cut(s) 157
AjuI GAANNNNNNNTTGG 2 cut(s) 682, 714
AloI GAACNNNNNNTCC 2 cut(s) 103, 135
Alw26I GTCTC 4 cut(s) 71, 317, 398, 805
AlwI GGATC 5 cut(s) 143, 291, 461, 474, 1009
AlwNI CAGNNNCTG 2 cut(s) 158, 983
ApeKI GCWGC 1 cut(s) 368
ApoI RAATTY 1 cut(s) 194
ArsI GACNNNNNNTTYG 2 cut(s) 41, 73
Asp700I GAANNNNTTC 1 cut(s) 194
AspS9I GGNCC 1 cut(s) 760
AsuHPI GGTGA 2 cut(s) 16, 697
AsuII TTCGAA 1 cut(s) 224
AvaII GGWCC 1 cut(s) 760
BamHI GGATCC 1 cut(s) 466
BarI GAAGNNNNNNTAC 4 cut(s) 73, 105, 442, 474
BbsI GAAGAC 1 cut(s) 81
BbvI GCAGC 1 cut(s) 380
BccI CCATC 2 cut(s) 244, 394
BceAI ACGGC 1 cut(s) 69
BciT130I CCWGG 1 cut(s) 159
BclI TGATCA 1 cut(s) 720
BcoDI GTCTC 4 cut(s) 71, 317, 398, 805
BfaI CTAG 1 cut(s) 114
BfmI CTRYAG 1 cut(s) 1007
BfuAI ACCTGC 1 cut(s) 873
BisI GCNGC 1 cut(s) 369
BlsI GCNGC 1 cut(s) 370
Bme1390I CCNGG 1 cut(s) 159
Bme18I GGWCC 1 cut(s) 760
BmgBI CACGTC 1 cut(s) 349
BmgT120I GGNCC 1 cut(s) 760
BmiI GGNNCC 4 cut(s) 120, 468, 761, 783
BmrFI CCNGG 1 cut(s) 159
BmsI GCATC 2 cut(s) 486, 900
BpiI GAAGAC 1 cut(s) 81
BpmI CTGGAG 1 cut(s) 180
Bpu14I TTCGAA 1 cut(s) 224
BpuEI CTTGAG 2 cut(s) 459, 824
BsaHI GRCGYC 1 cut(s) 56
BsaXI ACNNNNNCTCC 2 cut(s) 311, 341
Bsc4I CCNNNNNNNGG 5 cut(s) 158, 207, 476, 576, 769
BseBI CCWGG 1 cut(s) 159
BseGI GGATG 3 cut(s) 310, 723, 778
BseLI CCNNNNNNNGG 5 cut(s) 158, 207, 476, 576, 769
BseMII CTCAG 3 cut(s) 191, 444, 909
BseRI GAGGAG 1 cut(s) 335
BseXI GCAGC 1 cut(s) 380
BslFI GGGAC 1 cut(s) 773
BslI CCNNNNNNNGG 5 cut(s) 158, 207, 476, 576, 769
BsmAI GTCTC 4 cut(s) 71, 317, 398, 805
BsmBI CGTCTC 1 cut(s) 317
BsmFI GGGAC 1 cut(s) 773
Bsp119I TTCGAA 1 cut(s) 224
Bsp143I GATC 8 cut(s) 148, 283, 375, 466, 486, 720, 786, 1001
BspACI CCGC 2 cut(s) 732, 821
BspCNI CTCAG 3 cut(s) 190, 443, 910
BspHI TCATGA 1 cut(s) 69
BspLI GGNNCC 4 cut(s) 120, 468, 761, 783
BspMI ACCTGC 1 cut(s) 873
BspPI GGATC 5 cut(s) 143, 291, 461, 474, 1009
BspT104I TTCGAA 1 cut(s) 224
BssMI GATC 8 cut(s) 148, 283, 375, 466, 486, 720, 786, 1001
BssNI GRCGYC 1 cut(s) 56
Bst2UI CCWGG 1 cut(s) 159
Bst4CI ACNGT 4 cut(s) 32, 77, 340, 658
Bst6I CTCTTC 1 cut(s) 685
BstACI GRCGYC 1 cut(s) 56
BstBI TTCGAA 1 cut(s) 224
BstDEI CTNAG 6 cut(s) 177, 362, 430, 439, 492, 918
BstENI CCTNNNNNAGG 1 cut(s) 474
BstF5I GGATG 3 cut(s) 310, 723, 778
BstKTI GATC 8 cut(s) 151, 286, 378, 469, 489, 723, 789, 1004
BstMAI GTCTC 4 cut(s) 71, 317, 398, 805
BstMBI GATC 8 cut(s) 148, 283, 375, 466, 486, 720, 786, 1001
BstMWI GCNNNNNNNGC 4 cut(s) 340, 488, 637, 955
BstNI CCWGG 1 cut(s) 159
BstSCI CCNGG 1 cut(s) 157
BstSFI CTRYAG 1 cut(s) 1007
BstV1I GCAGC 1 cut(s) 380
BstV2I GAAGAC 1 cut(s) 81
BstX2I RGATCY 2 cut(s) 466, 1001
BstYI RGATCY 2 cut(s) 466, 1001
BtrI CACGTC 1 cut(s) 349
BtsCI GGATG 3 cut(s) 310, 723, 778
BveI ACCTGC 1 cut(s) 873
CaiI CAGNNNCTG 2 cut(s) 158, 983
CciI TCATGA 1 cut(s) 69
Cfr13I GGNCC 1 cut(s) 760
CseI GACGC 1 cut(s) 45
Csp6I GTAC 1 cut(s) 81
CviAII CATG 5 cut(s) 70, 106, 202, 768, 817
CviQI GTAC 1 cut(s) 81
DdeI CTNAG 6 cut(s) 177, 362, 430, 439, 492, 918
DpnI GATC 8 cut(s) 150, 285, 377, 468, 488, 722, 788, 1003
DpnII GATC 8 cut(s) 148, 283, 375, 466, 486, 720, 786, 1001
Eam1104I CTCTTC 1 cut(s) 685
EarI CTCTTC 1 cut(s) 685
Eco47I GGWCC 1 cut(s) 760
Eco57I CTGAAG 1 cut(s) 960
EcoNI CCTNNNNNAGG 1 cut(s) 474
EcoO109I RGGNCCY 1 cut(s) 760
EcoRII CCWGG 1 cut(s) 157
Esp3I CGTCTC 1 cut(s) 317
FaeI CATG 5 cut(s) 73, 109, 205, 771, 820
FaqI GGGAC 1 cut(s) 773
FatI CATG 5 cut(s) 69, 105, 201, 767, 816
FauI CCCGC 1 cut(s) 814
FbaI TGATCA 1 cut(s) 720
Fnu4HI GCNGC 1 cut(s) 369
FokI GGATG 3 cut(s) 297, 710, 785
Fsp4HI GCNGC 1 cut(s) 369
FspBI CTAG 1 cut(s) 114
GluI GCNGC 1 cut(s) 369
GsuI CTGGAG 1 cut(s) 180
HgaI GACGC 1 cut(s) 45
Hin1I GRCGYC 1 cut(s) 56
Hin1II CATG 5 cut(s) 73, 109, 205, 771, 820
HincII GTYRAC 1 cut(s) 561
HindII GTYRAC 1 cut(s) 561
HindIII AAGCTT 2 cut(s) 17, 257
HinfI GANTC 6 cut(s) 244, 289, 421, 455, 506, 994
HpaI GTTAAC 1 cut(s) 561
HphI GGTGA 2 cut(s) 16, 697
Hpy166II GTNNAC 1 cut(s) 561
Hpy188I TCNGA 6 cut(s) 180, 249, 288, 315, 433, 919
Hpy188III TCNNGA 6 cut(s) 70, 152, 418, 510, 841, 849
Hpy8I GTNNAC 1 cut(s) 561
Hpy99I CGWCG 1 cut(s) 61
HpyAV CCTTC 4 cut(s) 310, 480, 867, 984
HpyCH4III ACNGT 4 cut(s) 32, 77, 340, 658
HpyCH4IV ACGT 4 cut(s) 326, 348, 516, 752
HpyCH4V TGCA 2 cut(s) 343, 913
HpyF10VI GCNNNNNNNGC 4 cut(s) 340, 488, 637, 955
HpyF3I CTNAG 6 cut(s) 177, 362, 430, 439, 492, 918
HpySE526I ACGT 4 cut(s) 326, 348, 516, 752
Hsp92I GRCGYC 1 cut(s) 56
Hsp92II CATG 5 cut(s) 73, 109, 205, 771, 820
Ksp22I TGATCA 1 cut(s) 720
KspAI GTTAAC 1 cut(s) 561
Kzo9I GATC 8 cut(s) 148, 283, 375, 466, 486, 720, 786, 1001
LmnI GCTCC 2 cut(s) 479, 628
Lsp1109I GCAGC 1 cut(s) 380
LweI GCATC 2 cut(s) 486, 900
MaeI CTAG 1 cut(s) 114
MaeII ACGT 4 cut(s) 326, 348, 516, 752
MaeIII GTNAC 3 cut(s) 425, 713, 824
MalI GATC 8 cut(s) 150, 285, 377, 468, 488, 722, 788, 1003
MboI GATC 8 cut(s) 148, 283, 375, 466, 486, 720, 786, 1001
MflI RGATCY 2 cut(s) 466, 1001
MluCI AATT 2 cut(s) 194, 1012
MlyI GAGTC 1 cut(s) 253
MnlI CCTC 9 cut(s) 174, 313, 561, 568, 738, 848, 883, 913, 930
MroXI GAANNNNTTC 1 cut(s) 194
MseI TTAA 5 cut(s) 261, 387, 545, 560, 963
MspR9I CCNGG 1 cut(s) 159
MvaI CCWGG 1 cut(s) 159
MwoI GCNNNNNNNGC 4 cut(s) 340, 488, 637, 955
NdeII GATC 8 cut(s) 148, 283, 375, 466, 486, 720, 786, 1001
NlaIII CATG 5 cut(s) 73, 109, 205, 771, 820
NlaIV GGNNCC 4 cut(s) 120, 468, 761, 783
NspV TTCGAA 1 cut(s) 224
PagI TCATGA 1 cut(s) 69
PdmI GAANNNNTTC 1 cut(s) 194
PfeI GAWTC 5 cut(s) 289, 421, 455, 506, 994
PflMI CCANNNNNTGG 1 cut(s) 158
PkrI GCNGC 1 cut(s) 370
PleI GAGTC 1 cut(s) 252
PpsI GAGTC 1 cut(s) 252
PpuMI RGGWCCY 1 cut(s) 760
Psp1406I AACGTT 2 cut(s) 516, 752
Psp5II RGGWCCY 1 cut(s) 760
Psp6I CCWGG 1 cut(s) 157
PspGI CCWGG 1 cut(s) 157
PspN4I GGNNCC 4 cut(s) 120, 468, 761, 783
PspPI GGNCC 1 cut(s) 760
PspPPI RGGWCCY 1 cut(s) 760
PstNI CAGNNNCTG 2 cut(s) 158, 983
PsuI RGATCY 2 cut(s) 466, 1001
RsaI GTAC 1 cut(s) 82
RsaNI GTAC 1 cut(s) 81
SaqAI TTAA 5 cut(s) 261, 387, 545, 560, 963
SatI GCNGC 1 cut(s) 369
Sau3AI GATC 8 cut(s) 148, 283, 375, 466, 486, 720, 786, 1001
Sau96I GGNCC 1 cut(s) 760
SchI GAGTC 1 cut(s) 253
ScrFI CCNGG 1 cut(s) 159
SfaNI GCATC 2 cut(s) 486, 900
SfcI CTRYAG 1 cut(s) 1007
SfuI TTCGAA 1 cut(s) 224
SinI GGWCC 1 cut(s) 760
SmlI CTYRAG 2 cut(s) 474, 839
SmoI CTYRAG 2 cut(s) 474, 839
Sse9I AATT 2 cut(s) 194, 1012
SsiI CCGC 2 cut(s) 732, 821
SspMI CTAG 1 cut(s) 114
StyD4I CCNGG 1 cut(s) 157
TaaI ACNGT 4 cut(s) 32, 77, 340, 658
TaiI ACGT 4 cut(s) 329, 351, 519, 755
TaqI TCGA 5 cut(s) 26, 224, 292, 378, 848
TasI AATT 2 cut(s) 194, 1012
TfiI GAWTC 5 cut(s) 289, 421, 455, 506, 994
Tru1I TTAA 5 cut(s) 261, 387, 545, 560, 963
Tru9I TTAA 5 cut(s) 261, 387, 545, 560, 963
TseI GCWGC 1 cut(s) 368
TspDTI ATGAA 5 cut(s) 26, 86, 218, 290, 805
TspGWI ACGGA 1 cut(s) 315
Van91I CCANNNNNTGG 1 cut(s) 158
VpaK11BI GGWCC 1 cut(s) 760
XagI CCTNNNNNAGG 1 cut(s) 474
XapI RAATTY 1 cut(s) 194
XmnI GAANNNNTTC 1 cut(s) 194
XspI CTAG 1 cut(s) 114
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.