Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0009158

Physical Location & Seq

Genomic Coordinates Reverse (-)

10248851 .. 10254641

Gene Structure 5791 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G24120.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2982 bp

ATGGCTTCCGCTGCGGCGGCTTCTCCTTCTCTCTCCTTAAACCCAACCTCTCATTTCCAACACCAAACTTCTCTCGTCACCTGGCTTAAACCTCCTCCCTCCTCCGCCCTCTTCCGCCGCAAAACCCTTCCTTTCTTCGAACGCCACTCACTTCCGATTTCAGCTTCTTCTTCTTCTTCTTCTTCCTCTTCTACTTCCCTCTCCGTTCACGAGAAACCCATTTCGAATTCGGTTCACTTCCACGGCAATCTCATCGAGAGCTTCGAGAATCAGGACTCTTCATACGCTGGAACCATTAAAGGAGCAAGCTTGATTGAGGAGCTTGAGAATCCTGTCGAAAGGAATGGACTTTCTGGTCGGAGAAGACTGTTTATGCAAGACCCACCATGGATCTCTGCTTTGTTTCTCAAGGGTTTGAGTAAAATGGTTGATCAGACTTTGAAAATCGAGCGGAAAGATATCGATAAGAGGAAATTTGATTCCTTGAGGAGACGACAAGTGAAGGAAGAGACTGAAGCGTGGGAGAGGATGGTTGATGAGTACAGAGATTTGGAGAAGGAGATGTGTGAGAAGAATCTAGCTCCGAATTTGCCTTATGTGAAACATATGTTCTTGGGATGGTTTCAACCTTTGAAAGATGTGATTGAGAGAGAGCAGAAGTTGCAGAAGAATAAGAGCAAGAAGGTTAGAGCAGCTTATGCTCCTCATATTGAGCTTTTGCCTGCTGATAAAATGGCGGTTATTGTGATGCATAAGATGATGGGTTTGGTTATGTCTGGACATGAAGATGGGTGTATCCAAGTTGTTCAAGCTGCTGTTAGTATTGGCATAGCTATTGAGCAGGAGGTGAGGATTCATAACTTCTTGAAGAGAACTAGGAAGAACAATGCAGGGGACTCACAAGAGGAATTGAAAGAAAAGCAATTGCTTAGGAAACGTGTTAATAGTTTGATTCGAAGGAAAAGGATTATTGACGCATTAAAAGTGGTGAAAAGTGAAGGTACCAAACCATGGGGACGAGCTACACAAGCTAAGCTTGGAAGCCGTCTGCTAGAACTATTGATCGAAGCAGCTTATGTGCAACCTCCCTTGACCCAGTCTGGGGACTCTATACCCGAGTTTCGACCTGCATTCAGACACAGGTTTAAAACTGTGACTAAATATCCAGGGTCTAAGCTGGTGAGGAGGTATGGAGTTATTGAATGTGACTCGCTCCTTCTTGCAGGACTAGATAAATCTGCTAAGCATATGTTAATTCCTTATGTTCCGATGTTAGTGCCACCAAAGAGATGGAAAGGATATGACAAGGGTGGTTACTTGTTTTTACCTTCCTATATCATGCGTACTCATGGATCCAAAAAGCAGCAAGATGCACTGAAAGATATTAGTCACAAGACTGCTCATAGAGTATTTGAGGCATTGGATACACTTGGGAATACCAAGTGGAGGGTGAATAGGAATATACTTGATGTGGTAGAAAGGCTCTGGGCTGATGGAGGCAACATTGCAGGCTTAGTTAATCGTGAAGATGTTCCCATACCCGAAAAACCATCCTCTGAGGATCCTGAAGAACTCCAGTCCTGGAAATGGAGTGCTCGAAAGGCCAACAAGATTAACAGAGAGAGGCATTCTCTAAGATGTGATGTTGAGCTCAAACTTTCTGTGGCTAGAAAAATGAAGGACGAAGAAGGATTCTACTACCCTCACAATCTTGACTTTAGAGGCCGTGCATACCCAATGCATCCTCATCTGAATCATCTGAGTTCTGATCTTTGCCGTGGAACCCTGGAGTTTGCTGAAGGACGACCACTTGGAAAGTCAGGCTTGCATTGGCTGAAAATACATTTAGCAAACCTCTATGCAGGTGGTGTTGAAAAGCTCTCACATGATGCCCGTCTGGCTTTCGTGGAAAACCATTTGGATGATATAATGGATTCAGCTGAAAATCCTATACATGGAAAACGATGGTGGTTAAAGGCTGAAGATCCGTTTCAGTGTTTAGCTGCATGTGTTATTCTGACACAAGCCTTGAAAAGCCCTTCACCTTATTCAGTAATTTCCCACTTGCCTATTCATCAGGATGGGTCGTGCAATGGTCTACAGCATTATGCAGCTTTAGGAAGAGATAGTTTTGAAGCTGCGGCAGTTAATCTAGTTGCAGGAGAAAAACCAGCTGATGTCTACTCTGAAATTTCACGGAGAGTTCATGAAATAATGAAGAAGGACAGCAGTAAGGATCCTGAGTCAAACCCAACCGCCGCACTGGCAAAGATCCTTATCACTCAAGTCGACAGGAAGCTGGTAAAGCAGACGGTAATGACGTCAGTATATGGTGTCACCTATGTAGGGGCTCGTGAACAAATAAAAAGAAGATTAGAAGAGAAAGGTGTTATCACTGACGAGAGAATGTTATTTGCTGCTGCTTGCTATTCTGCAAAAGTGACGCTAGCTGCCCTTGGAGAGATATTTGAAGCGGCACGTGCCATTATGAGTTGGCTTGGTGATTGTGCAAAGATAATTGCTTCCGATAATCATCCAGTGCGATGGATCACCCCTCTTGGGCTTCCTGTTGTGCAACCCTATTGCAGAAGTGAAAGACATCTGATAAGAACATCTCTTCAGGTTTTGGCTCTGCAGCGAGAGGGTAACACGGTCGATGTTAGGAAACAAAGAACTGCATTTCCTCCCAACTTTGTGCACTCGCTGGACGGCACTCACATGATGATGACTGCTGTTGCATGTCGAGAGGCCGGCCTAAACTTTGCAGGTGTGCATGACTCATACTGGACCCATGCATGTGACGTTGACACAATGAACAGAATACTTAGAGAGAAATTCGTTGAGCTTTACAACACACCGATCCTTGAAGATTTGCTCCAAAGTTTCCAAGAATCATACCCGAATCTCGTGTTTCCTCCAGTACCAAAGAGAGGTGATTTCGATTTAAAGGAAGTTCTCAAATCACAGTACTTCTTCAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000428 GO:0000959 GO:0003674 GO:0003824 GO:0003899 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006351 GO:0006390 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009536 GO:0009987 GO:0010467 GO:0016070 GO:0016740 GO:0016772 GO:0016779 GO:0018130 GO:0019438 GO:0030880 GO:0032774 GO:0032991 GO:0034062 GO:0034245 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0061695 GO:0071704 GO:0090304 GO:0097659 GO:0097747 GO:0098798 GO:0140053 GO:0140098 GO:1901360 GO:1901362 GO:1901576 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RNA_pol RPOL_N

Protein Analysis

993

Amino Acids

112.62

Weight (kDa)

9.29

Isoelectric Point (pI)

54.91

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RPOL_N	PF14700	165 - 479	2.3e-81	DNA-directed RNA polymerase N-terminal
RNA_pol	PF00940	602 - 968	1.8e-157	DNA-dependent RNA polymerase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009158)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G24120 AT2G24120
fragaria_vesca	FvH4_1g00590 FvH4_1g00590 FvH4_1g00590 FvH4_1g00590
malus_domestica	MD02G1004800.v1.1
prunus_persica	Prupe.7G266200_v2.0.a1 Prupe.7G266200_v2.0.a1
pyrus_communis	pycom02g00340 pycom15g13310
rosa_chinensis	RchiOBHm_Chr2g0085221
rosa_laevigata	RLG00000015668
rosa_multiflora	Rmu_sc0008510.1_g000002 Rmu_sc0011989.1_g000007
rosa_roxburghii	Rroxscaffold_2G00155550
rosa_rugosa	Rorug01G0458400
rosa_samantha	Rh2AG006900 Rh2BG007500 Rh2CG008300 Rh2DG008600
rosa_wichuraiana	Rw2G000660

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	1853, 2756
AasI	GACNNNNNNGTC	1 cut(s)	354
AatII	GACGTC	1 cut(s)	2324
Acc36I	ACCTGC	3 cut(s)	1135, 1853, 2756
Acc65I	GGTACC	1 cut(s)	1001
AccB1I	GGYRCC	1 cut(s)	1001
AccB7I	CCANNNNNTGG	1 cut(s)	1011
AccBSI	CCGCTC	1 cut(s)	451
AccI	GTMKAC	3 cut(s)	2098, 2181, 2289
AcsI	RAATTY	5 cut(s)	226, 473, 586, 2190, 2834
AcuI	CTGAAG	5 cut(s)	534, 1587, 1818, 2001, 2603
AcvI	CACGTG	1 cut(s)	2480
AcyI	GRCGYC	1 cut(s)	2321
AfaI	GTAC	5 cut(s)	542, 1003, 1345, 2922, 2969
AfiI	CCNNNNNNNGG	9 cut(s)	1011, 1101, 1102, 1446, 1587, 1955, 2346, 2559, 2930
AflIII	ACRYGT	1 cut(s)	937
AjnI	CCWGG	4 cut(s)	80, 1165, 1580, 1785
AloI	GAACNNNNNNTCC	2 cut(s)	2665, 2697
Alw21I	GWGCWC	3 cut(s)	1597, 1653, 2700
Alw26I	GTCTC	2 cut(s)	484, 503
Alw44I	GTGCAC	1 cut(s)	2696
Ama87I	CYCGRG	1 cut(s)	1115
AoxI	GGCC	4 cut(s)	1602, 1723, 2748, 2752
ApaLI	GTGCAC	1 cut(s)	2696
ApoI	RAATTY	5 cut(s)	226, 473, 586, 2190, 2834
Asp700I	GAANNNNTTC	1 cut(s)	1530
Asp718I	GGTACC	1 cut(s)	1001
AspS9I	GGNCC	1 cut(s)	2787
AsuII	TTCGAA	3 cut(s)	138, 224, 955
AsuNHI	GCTAGC	1 cut(s)	2446
AvaI	CYCGRG	1 cut(s)	1115
AvaII	GGWCC	1 cut(s)	2787
BaeGI	GKGCMC	1 cut(s)	2700
BamHI	GGATCC	3 cut(s)	1352, 1561, 2236
BanI	GGYRCC	1 cut(s)	1001
BanII	GRGCYC	2 cut(s)	1653, 2353
BauI	CACGAG	3 cut(s)	209, 2352, 2906
BbrPI	CACGTG	1 cut(s)	2480
BbsI	GAAGAC	1 cut(s)	370
Bbv12I	GWGCWC	3 cut(s)	1597, 1653, 2700
BceAI	ACGGC	5 cut(s)	259, 1029, 1710, 1761, 2725
BcgI	CGANNNNNNTGC	4 cut(s)	235, 269, 1258, 1292
BciT130I	CCWGG	4 cut(s)	82, 1167, 1582, 1787
BciVI	GTATCC	2 cut(s)	806, 1417
BclI	TGATCA	1 cut(s)	430
BcoDI	GTCTC	2 cut(s)	484, 503
BfaI	CTAG	7 cut(s)	578, 876, 1052, 1229, 1668, 2153, 2447
BfmI	CTRYAG	2 cut(s)	2099, 2633
BfuAI	ACCTGC	3 cut(s)	1135, 1853, 2756
BfuI	GTATCC	2 cut(s)	806, 1417
BglI	GCCNNNNNGGC	2 cut(s)	1898, 2264
BlpI	GCTNAGC	2 cut(s)	1032, 1242
BmcAI	AGTACT	1 cut(s)	2969
Bme1390I	CCNGG	4 cut(s)	82, 1167, 1582, 1787
Bme18I	GGWCC	1 cut(s)	2787
BmeT110I	CYCGRG	1 cut(s)	1115
BmgT120I	GGNCC	1 cut(s)	2787
BmiI	GGNNCC	7 cut(s)	292, 1003, 1354, 1563, 1783, 2238, 2789
BmrFI	CCNGG	4 cut(s)	82, 1167, 1582, 1787
BmrI	ACTGGG	1 cut(s)	1090
BmsI	GCATC	4 cut(s)	738, 1360, 1750, 1879
BmtI	GCTAGC	1 cut(s)	2450
BmuI	ACTGGG	1 cut(s)	1090
BpiI	GAAGAC	1 cut(s)	370
BplI	GAGNNNNNCTC	2 cut(s)	1615, 1647
BpmI	CTGGAG	3 cut(s)	1559, 1808, 2901
Bpu10I	CCTNAGC	1 cut(s)	929
Bpu1102I	GCTNAGC	2 cut(s)	1032, 1242
Bpu14I	TTCGAA	3 cut(s)	138, 224, 955
BpuEI	CTTGAG	4 cut(s)	344, 392, 505, 2268
Bsa29I	ATCGAT	1 cut(s)	462
BsaAI	YACGTR	1 cut(s)	2480
BsaBI	GATNNNNATC	2 cut(s)	2276, 2532
BsaHI	GRCGYC	1 cut(s)	2321
BsaJI	CCNNGG	7 cut(s)	241, 386, 1010, 1166, 1777, 1785, 2455
Bsc4I	CCNNNNNNNGG	9 cut(s)	1011, 1101, 1102, 1446, 1587, 1955, 2346, 2559, 2930
Bse118I	RCCGGY	1 cut(s)	2750
Bse1I	ACTGG	6 cut(s)	1096, 1576, 2268, 2537, 2789, 2918
Bse3DI	GCAATG	2 cut(s)	1503, 2098
Bse8I	GATNNNNATC	2 cut(s)	2276, 2532
BseBI	CCWGG	4 cut(s)	82, 1167, 1582, 1787
BseCI	ATCGAT	1 cut(s)	462
BseDI	CCNNGG	7 cut(s)	241, 386, 1010, 1166, 1777, 1785, 2455
BseGI	GGATG	7 cut(s)	534, 623, 1550, 1741, 1927, 2086, 2533
BseJI	GATNNNNATC	2 cut(s)	2276, 2532
BseLI	CCNNNNNNNGG	9 cut(s)	1011, 1101, 1102, 1446, 1587, 1955, 2346, 2559, 2930
BseMI	GCAATG	2 cut(s)	1503, 2098
BseMII	CTCAG	3 cut(s)	1548, 1751, 2232
BseNI	ACTGG	6 cut(s)	1096, 1576, 2268, 2537, 2789, 2918
BseRI	GAGGAG	6 cut(s)	84, 91, 332, 502, 693, 1198
BseSI	GKGCMC	1 cut(s)	2700
Bsh1285I	CGRYCG	1 cut(s)	2655
BshFI	GGCC	4 cut(s)	1604, 1725, 2750, 2754
BshNI	GGYRCC	1 cut(s)	1001
BshVI	ATCGAT	1 cut(s)	462
BsiEI	CGRYCG	1 cut(s)	2655
BsiHKAI	GWGCWC	3 cut(s)	1597, 1653, 2700
BsiHKCI	CYCGRG	1 cut(s)	1115
BsiSI	CCGG	1 cut(s)	2751
BslFI	GGGAC	3 cut(s)	908, 1029, 1118
BslI	CCNNNNNNNGG	9 cut(s)	1011, 1101, 1102, 1446, 1587, 1955, 2346, 2559, 2930
BsmAI	GTCTC	2 cut(s)	484, 503
BsmBI	CGTCTC	1 cut(s)	484
BsmFI	GGGAC	3 cut(s)	908, 1029, 1118
BsmI	GAATGC	2 cut(s)	1130, 1627
BsnI	GGCC	4 cut(s)	1604, 1725, 2750, 2754
BsoBI	CYCGRG	1 cut(s)	1115
Bsp119I	TTCGAA	3 cut(s)	138, 224, 955
Bsp1286I	GDGCHC	4 cut(s)	1597, 1653, 2353, 2700
Bsp1720I	GCTNAGC	2 cut(s)	1032, 1242
Bsp19I	CCATGG	2 cut(s)	386, 1010
BspANI	GGCC	4 cut(s)	1604, 1725, 2750, 2754
BspCNI	CTCAG	3 cut(s)	1549, 1752, 2233
BspDI	ATCGAT	1 cut(s)	462
BspHI	TCATGA	1 cut(s)	2206
BspLI	GGNNCC	7 cut(s)	292, 1003, 1354, 1563, 1783, 2238, 2789
BspMAI	CTGCAG	1 cut(s)	2637
BspMI	ACCTGC	3 cut(s)	1135, 1853, 2756
BspOI	GCTAGC	1 cut(s)	2450
BspT104I	TTCGAA	3 cut(s)	138, 224, 955
BspT107I	GGYRCC	1 cut(s)	1001
BsrBI	CCGCTC	1 cut(s)	451
BsrDI	GCAATG	2 cut(s)	1503, 2098
BsrFI	RCCGGY	1 cut(s)	2750
BsrI	ACTGG	6 cut(s)	1096, 1576, 2268, 2537, 2789, 2918
BssAI	RCCGGY	1 cut(s)	2750
BssECI	CCNNGG	7 cut(s)	241, 386, 1010, 1166, 1777, 1785, 2455
BssNI	GRCGYC	1 cut(s)	2321
BssSI	CACGAG	3 cut(s)	209, 2352, 2906
BssT1I	CCWWGG	3 cut(s)	386, 1010, 2455
Bst2BI	CACGAG	3 cut(s)	209, 2352, 2906
Bst2UI	CCWGG	4 cut(s)	82, 1167, 1582, 1787
Bst4CI	ACNGT	5 cut(s)	369, 1153, 2314, 2653, 2967
Bst6I	CTCTTC	8 cut(s)	116, 193, 283, 501, 863, 2116, 2373, 2622
BstACI	GRCGYC	1 cut(s)	2321
BstAPI	GCANNNNNTGC	2 cut(s)	661, 698
BstBAI	YACGTR	1 cut(s)	2480
BstBI	TTCGAA	3 cut(s)	138, 224, 955
BstC8I	GCNNGC	7 cut(s)	307, 723, 1510, 1826, 2425, 2448, 2752
BstDSI	CCRYGG	4 cut(s)	241, 386, 1010, 1777
BstF5I	GGATG	7 cut(s)	534, 623, 1550, 1741, 1927, 2086, 2533
BstMAI	GTCTC	2 cut(s)	484, 503
BstMCI	CGRYCG	1 cut(s)	2655
BstNI	CCWGG	4 cut(s)	82, 1167, 1582, 1787
BstNSI	RCATGY	3 cut(s)	2010, 2742, 2799
BstSCI	CCNGG	4 cut(s)	80, 1165, 1580, 1785
BstSFI	CTRYAG	2 cut(s)	2099, 2633
BstSLI	GKGCMC	1 cut(s)	2700
BstV2I	GAAGAC	1 cut(s)	370
BstX2I	RGATCY	6 cut(s)	390, 1352, 1561, 1984, 2236, 2271
BstXI	CCANNNNNNTGG	2 cut(s)	1290, 2544
BstYI	RGATCY	6 cut(s)	390, 1352, 1561, 1984, 2236, 2271
Bsu15I	ATCGAT	1 cut(s)	462
BsuI	GTATCC	2 cut(s)	806, 1417
BsuRI	GGCC	4 cut(s)	1604, 1725, 2750, 2754
BsuTUI	ATCGAT	1 cut(s)	462
BtgI	CCRYGG	4 cut(s)	241, 386, 1010, 1777
BtgZI	GCGATG	1 cut(s)	2557
BtsCI	GGATG	7 cut(s)	534, 623, 1550, 1741, 1927, 2086, 2533
BtsIMutI	CAGTG	5 cut(s)	1373, 2000, 2261, 2394, 2544
BveI	ACCTGC	3 cut(s)	1135, 1853, 2756
Cac8I	GCNNGC	7 cut(s)	307, 723, 1510, 1826, 2425, 2448, 2752
CciI	TCATGA	1 cut(s)	2206
Cfr10I	RCCGGY	1 cut(s)	2750
Cfr13I	GGNCC	1 cut(s)	2787
ClaI	ATCGAT	1 cut(s)	462
CseI	GACGC	2 cut(s)	983, 2452
Csp6I	GTAC	5 cut(s)	541, 1002, 1344, 2921, 2968
CviQI	GTAC	5 cut(s)	541, 1002, 1344, 2921, 2968
DraI	TTTAAA	2 cut(s)	1147, 2946
DrdI	GACNNNNNNGTC	1 cut(s)	354
DseDI	GACNNNNNNGTC	1 cut(s)	354
Eam1104I	CTCTTC	8 cut(s)	116, 193, 283, 501, 863, 2116, 2373, 2622
EarI	CTCTTC	8 cut(s)	116, 193, 283, 501, 863, 2116, 2373, 2622
EciI	GGCGGA	2 cut(s)	94, 104
Ecl136II	GAGCTC	1 cut(s)	1651
Eco130I	CCWWGG	3 cut(s)	386, 1010, 2455
Eco24I	GRGCYC	2 cut(s)	1653, 2353
Eco32I	GATATC	1 cut(s)	460
Eco47I	GGWCC	1 cut(s)	2787
Eco53kI	GAGCTC	1 cut(s)	1651
Eco57I	CTGAAG	5 cut(s)	534, 1587, 1818, 2001, 2603
Eco72I	CACGTG	1 cut(s)	2480
Eco88I	CYCGRG	1 cut(s)	1115
EcoICRI	GAGCTC	1 cut(s)	1651
EcoRI	GAATTC	1 cut(s)	226
EcoRII	CCWGG	4 cut(s)	80, 1165, 1580, 1785
EcoRV	GATATC	1 cut(s)	460
EcoT14I	CCWWGG	3 cut(s)	386, 1010, 2455
EcoT22I	ATGCAT	3 cut(s)	753, 1743, 2797
EcoT38I	GRGCYC	2 cut(s)	1653, 2353
ErhI	CCWWGG	3 cut(s)	386, 1010, 2455
Esp3I	CGTCTC	1 cut(s)	484
FalI	AAGNNNNNCTT	4 cut(s)	1020, 1052, 1808, 1840
FaqI	GGGAC	3 cut(s)	908, 1029, 1118
FauNDI	CATATG	2 cut(s)	606, 1248
FbaI	TGATCA	1 cut(s)	430
FblI	GTMKAC	3 cut(s)	2098, 2181, 2289
FokI	GGATG	7 cut(s)	541, 630, 1537, 1728, 1934, 2093, 2520
FriOI	GRGCYC	2 cut(s)	1653, 2353
FseI	GGCCGGCC	1 cut(s)	2754
FspBI	CTAG	7 cut(s)	578, 876, 1052, 1229, 1668, 2153, 2447
GsuI	CTGGAG	3 cut(s)	1559, 1808, 2901
HaeIII	GGCC	4 cut(s)	1604, 1725, 2750, 2754
HapII	CCGG	1 cut(s)	2751
HgaI	GACGC	2 cut(s)	983, 2452
Hin1I	GRCGYC	1 cut(s)	2321
HincII	GTYRAC	2 cut(s)	2290, 2806
HindII	GTYRAC	2 cut(s)	2290, 2806
HindIII	AAGCTT	2 cut(s)	307, 1034
HpaII	CCGG	1 cut(s)	2751
Hpy166II	GTNNAC	8 cut(s)	208, 235, 2099, 2182, 2290, 2357, 2698, 2806
Hpy8I	GTNNAC	8 cut(s)	208, 235, 2099, 2182, 2290, 2357, 2698, 2806
HpyCH4III	ACNGT	5 cut(s)	369, 1153, 2314, 2653, 2967
HpyCH4IV	ACGT	4 cut(s)	937, 2321, 2479, 2802
HpySE526I	ACGT	4 cut(s)	937, 2321, 2479, 2802
Hsp92I	GRCGYC	1 cut(s)	2321
KpnI	GGTACC	1 cut(s)	1005
KroI	GCCGGC	1 cut(s)	2750
KroNI	GCCGGC	1 cut(s)	2752
Ksp22I	TGATCA	1 cut(s)	430
LmnI	GCTCC	6 cut(s)	302, 319, 586, 706, 1218, 2880
LweI	GCATC	4 cut(s)	738, 1360, 1750, 1879
MaeI	CTAG	7 cut(s)	578, 876, 1052, 1229, 1668, 2153, 2447
MaeII	ACGT	4 cut(s)	937, 2321, 2479, 2802
MaeIII	GTNAC	9 cut(s)	76, 1153, 1205, 1313, 1388, 2335, 2440, 2645, 2798
MbiI	CCGCTC	1 cut(s)	451
MfeI	CAATTG	1 cut(s)	923
MflI	RGATCY	6 cut(s)	390, 1352, 1561, 1984, 2236, 2271
MhlI	GDGCHC	4 cut(s)	1597, 1653, 2353, 2700
MlyI	GAGTC	6 cut(s)	269, 890, 1100, 1202, 2252, 2771
MmeI	TCCRAC	2 cut(s)	82, 338
Mph1103I	ATGCAT	3 cut(s)	753, 1743, 2797
MroNI	GCCGGC	1 cut(s)	2750
MroXI	GAANNNNTTC	1 cut(s)	1530
MslI	CAYNNNNRTG	6 cut(s)	786, 1920, 2079, 2717, 2723, 2796
MspA1I	CMGCKG	3 cut(s)	11, 1940, 2174
MspI	CCGG	1 cut(s)	2751
MspR9I	CCNGG	4 cut(s)	82, 1167, 1582, 1787
MunI	CAATTG	1 cut(s)	923
Mva1269I	GAATGC	2 cut(s)	1130, 1627
MvaI	CCWGG	4 cut(s)	82, 1167, 1582, 1787
NaeI	GCCGGC	1 cut(s)	2752
NcoI	CCATGG	2 cut(s)	386, 1010
NdeI	CATATG	2 cut(s)	606, 1248
NgoMIV	GCCGGC	1 cut(s)	2750
NheI	GCTAGC	1 cut(s)	2446
NlaIV	GGNNCC	7 cut(s)	292, 1003, 1354, 1563, 1783, 2238, 2789
NmuCI	GTSAC	7 cut(s)	76, 1153, 1205, 1388, 2335, 2440, 2798
NsiI	ATGCAT	3 cut(s)	753, 1743, 2797
NspI	RCATGY	3 cut(s)	2010, 2742, 2799
NspV	TTCGAA	3 cut(s)	138, 224, 955
PagI	TCATGA	1 cut(s)	2206
PaqCI	CACCTGC	2 cut(s)	1853, 2756
PcsI	WCGNNNNNNNCGW	2 cut(s)	261, 2318
PctI	GAATGC	2 cut(s)	1130, 1627
PdiI	GCCGGC	1 cut(s)	2752
PdmI	GAANNNNTTC	1 cut(s)	1530
PflFI	GACNNNGTC	1 cut(s)	1096
PflMI	CCANNNNNTGG	1 cut(s)	1011
PfoI	TCCNGGA	1 cut(s)	1580
PleI	GAGTC	6 cut(s)	269, 890, 1100, 1202, 2251, 2771
PmaCI	CACGTG	1 cut(s)	2480
PmlI	CACGTG	1 cut(s)	2480
PpsI	GAGTC	6 cut(s)	269, 890, 1100, 1202, 2251, 2771
Ppu21I	YACGTR	1 cut(s)	2480
Psp124BI	GAGCTC	1 cut(s)	1653
Psp6I	CCWGG	4 cut(s)	80, 1165, 1580, 1785
PspCI	CACGTG	1 cut(s)	2480
PspGI	CCWGG	4 cut(s)	80, 1165, 1580, 1785
PspN4I	GGNNCC	7 cut(s)	292, 1003, 1354, 1563, 1783, 2238, 2789
PspPI	GGNCC	1 cut(s)	2787
PstI	CTGCAG	1 cut(s)	2637
PsuI	RGATCY	6 cut(s)	390, 1352, 1561, 1984, 2236, 2271
PsyI	GACNNNGTC	1 cut(s)	1096
PvuII	CAGCTG	2 cut(s)	1940, 2174
RigI	GGCCGGCC	1 cut(s)	2754
RsaI	GTAC	5 cut(s)	542, 1003, 1345, 2922, 2969
RsaNI	GTAC	5 cut(s)	541, 1002, 1344, 2921, 2968
RseI	CAYNNNNRTG	6 cut(s)	786, 1920, 2079, 2717, 2723, 2796
SacI	GAGCTC	1 cut(s)	1653
SalI	GTCGAC	1 cut(s)	2288
Sau96I	GGNCC	1 cut(s)	2787
ScaI	AGTACT	1 cut(s)	2969
SchI	GAGTC	6 cut(s)	269, 890, 1100, 1202, 2252, 2771
ScrFI	CCNGG	4 cut(s)	82, 1167, 1582, 1787
SduI	GDGCHC	4 cut(s)	1597, 1653, 2353, 2700
SfaNI	GCATC	4 cut(s)	738, 1360, 1750, 1879
SfcI	CTRYAG	2 cut(s)	2099, 2633
SfuI	TTCGAA	3 cut(s)	138, 224, 955
SinI	GGWCC	1 cut(s)	2787
SmiMI	CAYNNNNRTG	6 cut(s)	786, 1920, 2079, 2717, 2723, 2796
SmlI	CTYRAG	4 cut(s)	323, 407, 484, 2283
SmoI	CTYRAG	4 cut(s)	323, 407, 484, 2283
SspMI	CTAG	7 cut(s)	578, 876, 1052, 1229, 1668, 2153, 2447
SstI	GAGCTC	1 cut(s)	1653
StyD4I	CCNGG	4 cut(s)	80, 1165, 1580, 1785
StyI	CCWWGG	3 cut(s)	386, 1010, 2455
TaaI	ACNGT	5 cut(s)	369, 1153, 2314, 2653, 2967
TaiI	ACGT	4 cut(s)	940, 2324, 2482, 2805
TatI	WGTACW	2 cut(s)	540, 2967
TauI	GCSGC	6 cut(s)	17, 20, 120, 2144, 2261, 2477
TscAI	CASTG	5 cut(s)	1380, 2000, 2268, 2401, 2544
TseFI	GTSAC	7 cut(s)	76, 1153, 1205, 1388, 2335, 2440, 2798
Tsp45I	GTSAC	7 cut(s)	76, 1153, 1205, 1388, 2335, 2440, 2798
TspDTI	ATGAA	9 cut(s)	270, 798, 845, 1691, 2063, 2195, 2223, 2231, 2828
TspGWI	ACGGA	3 cut(s)	193, 1977, 2212
TspRI	CASTG	5 cut(s)	1380, 2000, 2268, 2401, 2544
Tth111I	GACNNNGTC	1 cut(s)	1096
Van91I	CCANNNNNTGG	1 cut(s)	1011
VneI	GTGCAC	1 cut(s)	2696
VpaK11BI	GGWCC	1 cut(s)	2787
XapI	RAATTY	5 cut(s)	226, 473, 586, 2190, 2834
XceI	RCATGY	3 cut(s)	2010, 2742, 2799
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1287
XmiI	GTMKAC	3 cut(s)	2098, 2181, 2289
XmnI	GAANNNNTTC	1 cut(s)	1530
XspI	CTAG	7 cut(s)	578, 876, 1052, 1229, 1668, 2153, 2447
ZraI	GACGTC	1 cut(s)	2322
ZrmI	AGTACT	1 cut(s)	2969
Zsp2I	ATGCAT	3 cut(s)	753, 1743, 2797

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.