Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0009158

Physical Location & Seq

Genomic Coordinates Forward (+)

21949442 .. 21959019

Gene Structure 9578 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G266200.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2931 bp

ATGGCTTCCACAGCCTCATTCTCTCCGAGCCCTCAAGCTCAAACATACACATGCAGTTCCAGATGGAGTAAAGCTCCGAAGCTTAACCACAAGTTTCTCTTCAGCTCAACCTCCAACAGTCTCTTCTTCAAGCCCTCACACTCTTCCTCCACTCATTTCCCGCTAAACCTTAAACCCCCTCCAGAACCTGTTCATATCCCCCCGTTGAGAGACTCAATACAAGACAATATCGTCGAAAATTCGATGAATTTTCAGATACCCATGAGCGAATTTCATCTAATTACACCTCAGGAATCGGCCCCGAGGATTTTTATCCAAGACCCGCCATGGATTGCCTCACTCTTTTTGAAGGGTATTTACAAAAGAGCCAACCAAGAATTGAAATTGGAGTCTAAGGAAATTGAGAGGAGGAACTATAATGTACTTAGGAGGAGGCAGATAAAGGCCGAGACCGAGGCTTGGGAGAGAATGGTGGACGAATATAAGGATTTGGAAAAAGTAATGCGTGAGAAGAAGTTAGCTCCGAATTTGCCTTATGTAAAGGCCTTGTTTTTGGGTTGGTTTGAGCCGTTGAGGGAGGCGATAGCGAGGGAACAGAAGACGCAGCAAACGAAAAAACACAAGGCAGCGTTTGCGCCCCACATTGATTTGTTGCCGGCTGACAAGATGGCGCTTATTGTTATGCATAAGATGATGGGGTTGGTTATGGTGGGGAATCAAGATGGGTGTGTTCAAGTTGTTCAAGCTGCTGTTCATATTGGCATGGCCATAGAGCAGGAGGTCAGGATCCATAGTTTCTTGGAGAAAACCAAAAATCTCCAGAAAAAGAAGACTGGTGTTGCTGATGAAGATGGTCTGAGCAAGGAGAAGGAGATACTCCGGAAACGTGTTAATGGTTTAATTAGAAGGAAAAGGCTGAATGAGGTGCAAAAGCTATTGATAAAGGAAGAAATGAAGCCCTGGGGTCGTGATAAACAGGCTAAGCTGGGAAGTCGTCTGATAGAATTATTAACCGAAACAGCTTATGTACAACCTCCACTTAGCCAGTTGGCAGATAGTCCACCTGATGTTAGACCTGCATTTAGGCACAGATTTAAAGCCGTGGCAAAAAGTCCAGGGCAGAAAATTGTGAAGAACTATGGAGTTATAGAATGTGATCCCCTGGTTCTTACTGGCCTTGATAAAACTGCTAAACATATGTTGATTCCTTATGTGCCAATGTTGGTGCCTCCCAAAAGATGGAAAGGGTATGACAAGGGTGGGCATTTGTTCTTACCTTCTTATGTCATGCGTACTCATGGATCTAGGAAGCAGGTAGATGCAATGAGGAACATTTCTAGAAACCAGATGCAGAAAGTATTTGAGGCCCTTGATATGCTTGGAAGCACCAAATGGAGGGTGAATAAGAAAGTACTTAGTGTGGTGGAGAGCATCTGGGCTAGAGGTGGCAACATTGCAGGCCTGGTTAATCGTGAAGACGTTCCTGTACCGGATAAATCACCATCTGAGGATTTAAAAGAAATTCAGGAATGGAAATGGAGTGTCAGAAAAGCAAAGAAGATTAACCAAGAGAGGCATTCTCAACGATGTGACACTGAACTTAAGCTCTCTGTTGCTCGCAAAATGAAAGATGAGGAAGGCTTTTATTATCCCCACAATCTTGATTTCCGAGGCCGAGCATACCCAATGCATCCACATTTGAATCATTTGAGTTCTGATCTCTGTCGAGGAGTCCTTGAATTTGCTGAAGGACGACCATTAGGGAAGTCTGGATTACGTTGGCTGAAGATTCATTTAGCAAACCTGTATGCTGGCGGTGTTGAAAAGCTTTCATATGAGGGGCGACTAGCATTTGTGGATAATCACATTGATGATATATTTGATTCAGCAACAAACCCGGTTAATGGAAACCGTTGGTGGTTAACAGCTGAAGATCCTTTACAGTGCCTAGCTGCTTGTATCAATCTCTCAGAAGCCTTAAATAGCCCATCACCACATACTGTCATTTCTCATTTGCCCATCCATCAGGATGGTTCATGCAATGGCTTACAGCACTATGCAGCCTTGGGAAGAGATAGCTTGGAAGCAGCTGCAGTCAACTTAGTTGATGGAGATAAACCTGCTGATGTTTACTCAGAAATTGCTGCGAGGGTACATGAGATTATGAAAAGAGACAGCAATAAAGACCCAACTACGAGTCCAAATGCTTTATTAGCCAGAATCTTAGTCAATCAGATTGATAGGAAATTGGTGAAGCAGACTGTAATGACTTCAGTATATGGTGTTACTTATGTTGGGGCACGTGAACAAATAAAAAGAAGATTAGAAGAGAAGGGTCTTATTACCGATGACAGACTACTGTTCACTGCAGCTTGCTATGCTGCTAAAGTTACTCTGGCTGCCCTCGGAGAGATATTCCAAGCTGCCCGTGGCATAATGAGCTGGCTTGGTGATTGTGCTAAGGTAATTGCTTCAGAAAATCAACCTGTGCGCTGGACTACTCCTCTAGGTCTTCCTGTTGTGCAACCCTATTGTAAAAGTGAAAGGCATCTTATAAGAACATCTCTTCAGGTTTTAGCCTTGCAACGGGAGAGTAACTCAGTAGATATTAGAAAACAGAGAACTGCATTTCCTCCAAATTTTGTACACTCACTTGACGGTTCACACATGATGATGACAGCTCTTGCCTGCAGGGACGCTGGCCTACGTTTTGCAGGGGTGCATGATTCCTTCTGGACTCATCCGTGTGATGTGGACCAAATGAACGAGATACTTCGGGAAAAATTTGTGGAGCTTTATAGCATGCCAATACTTGAAAGTTTGCTTGAAAGTTTCCAAGCATCATATCCAGCATTGACTTTTCCTCCACTCCCAGAAAGAGGCGACTTTGACTTGCTACAGGTTCTAGAATCTCCATACTTTTTCAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000428 GO:0000959 GO:0003674 GO:0003824 GO:0003899 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006351 GO:0006390 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009536 GO:0009987 GO:0010467 GO:0016070 GO:0016740 GO:0016772 GO:0016779 GO:0018130 GO:0019438 GO:0030880 GO:0032774 GO:0032991 GO:0034062 GO:0034245 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0061695 GO:0071704 GO:0090304 GO:0097659 GO:0097747 GO:0098798 GO:0140053 GO:0140098 GO:1901360 GO:1901362 GO:1901576 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RNA_pol RPOL_N

Protein Analysis

977

Amino Acids

110.87

Weight (kDa)

9.28

Isoelectric Point (pI)

55.5

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009158)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G24120 AT2G24120
fragaria_vesca	FvH4_1g00590 FvH4_1g00590 FvH4_1g00590 FvH4_1g00590
malus_domestica	MD02G1004800.v1.1
prunus_persica	Prupe.7G266200_v2.0.a1 Prupe.7G266200_v2.0.a1
pyrus_communis	pycom02g00340 pycom15g13310
rosa_chinensis	RchiOBHm_Chr2g0085221
rosa_laevigata	RLG00000015668
rosa_multiflora	Rmu_sc0008510.1_g000002 Rmu_sc0011989.1_g000007
rosa_roxburghii	Rroxscaffold_2G00155550
rosa_rugosa	Rorug01G0458400
rosa_samantha	Rh2AG006900 Rh2BG007500 Rh2CG008300 Rh2DG008600
rosa_wichuraiana	Rw2G000660

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2555
AasI	GACNNNNNNGTC	1 cut(s)	230
Acc36I	ACCTGC	3 cut(s)	1084, 1303, 2128
AccB1I	GGYRCC	1 cut(s)	1225
AccB7I	CCANNNNNTGG	1 cut(s)	1239
AccIII	TCCGGA	1 cut(s)	879
AciI	CCGC	3 cut(s)	161, 323, 1815
AclWI	GGATC	5 cut(s)	781, 794, 1151, 1309, 1928
AcoI	YGGCCR	1 cut(s)	765
AcsI	RAATTY	8 cut(s)	238, 247, 269, 526, 1521, 1739, 2638, 2783
AcuI	CTGAAG	7 cut(s)	85, 1767, 1805, 1950, 2256, 2457, 2552
AcvI	CACGTG	1 cut(s)	2303
AfaI	GTAC	7 cut(s)	423, 1029, 1294, 1413, 1488, 2154, 2646
AfiI	CCNNNNNNNGG	6 cut(s)	459, 1239, 1395, 1904, 2586, 2879
AflII	CTTAAG	1 cut(s)	1601
AflIII	ACRYGT	1 cut(s)	886
AjnI	CCWGG	4 cut(s)	959, 1114, 1161, 1461
AjuI	GAANNNNNNNTTGG	2 cut(s)	107, 139
AloI	GAACNNNNNNTCC	2 cut(s)	2614, 2646
Alw26I	GTCTC	4 cut(s)	125, 204, 443, 2166
AlwI	GGATC	5 cut(s)	781, 794, 1151, 1309, 1928
AlwNI	CAGNNNCTG	1 cut(s)	188
Ama87I	CYCGRG	1 cut(s)	301
Aor13HI	TCCGGA	1 cut(s)	879
AoxI	GGCC	9 cut(s)	297, 444, 543, 765, 1174, 1365, 1459, 1672, 2701
ApoI	RAATTY	8 cut(s)	238, 247, 269, 526, 1521, 1739, 2638, 2783
Asp700I	GAANNNNTTC	2 cut(s)	189, 1479
AspLEI	GCGC	3 cut(s)	637, 673, 2493
AspS9I	GGNCC	3 cut(s)	298, 1366, 2755
AsuC2I	CCSGG	1 cut(s)	1898
AsuHPI	GGTGA	5 cut(s)	1411, 1491, 1983, 2263, 2462
AvaI	CYCGRG	1 cut(s)	301
AvaII	GGWCC	1 cut(s)	2755
AxyI	CCTNAGG	1 cut(s)	288
BaeGI	GKGCMC	1 cut(s)	2302
BalI	TGGCCA	1 cut(s)	767
BamHI	GGATCC	1 cut(s)	786
BanI	GGYRCC	1 cut(s)	1225
BanII	GRGCYC	1 cut(s)	32
BarI	GAAGNNNNNNTAC	4 cut(s)	341, 373, 1923, 1955
BbrPI	CACGTG	1 cut(s)	2303
BbsI	GAAGAC	4 cut(s)	605, 836, 1482, 2504
BceAI	ACGGC	2 cut(s)	553, 1085
BciT130I	CCWGG	4 cut(s)	961, 1116, 1163, 1463
BcnI	CCSGG	1 cut(s)	1898
BcoDI	GTCTC	4 cut(s)	125, 204, 443, 2166
BfaI	CTAG	7 cut(s)	1305, 1338, 1440, 1847, 1949, 2507, 2906
BfmI	CTRYAG	4 cut(s)	2091, 2367, 2689, 2897
BfoI	RGCGCY	1 cut(s)	674
BfrI	CTTAAG	1 cut(s)	1601
BfuAI	ACCTGC	3 cut(s)	1084, 1303, 2128
BlpI	GCTNAGC	1 cut(s)	981
BmcAI	AGTACT	1 cut(s)	1413
Bme1390I	CCNGG	5 cut(s)	961, 1116, 1163, 1463, 1898
Bme18I	GGWCC	1 cut(s)	2755
BmeT110I	CYCGRG	1 cut(s)	301
BmgT120I	GGNCC	3 cut(s)	298, 1366, 2755
BmiI	GGNNCC	3 cut(s)	300, 788, 1227
BmrFI	CCNGG	5 cut(s)	961, 1116, 1163, 1463, 1898
BmsI	GCATC	6 cut(s)	1309, 1338, 1440, 1699, 2557, 2849
BpiI	GAAGAC	4 cut(s)	605, 836, 1482, 2504
BplI	GAGNNNNNCTC	6 cut(s)	58, 90, 1564, 1596, 2582, 2614
BpmI	CTGGAG	2 cut(s)	165, 803
Bpu10I	CCTNAGC	1 cut(s)	2460
Bpu1102I	GCTNAGC	1 cut(s)	981
BpuEI	CTTGAG	1 cut(s)	18
BpuMI	CCSGG	1 cut(s)	1898
BsaAI	YACGTR	1 cut(s)	2303
BsaBI	GATNNNNATC	1 cut(s)	311
BsaI	GGTCTC	1 cut(s)	443
BsaWI	WCCGGW	2 cut(s)	879, 1489
BsaXI	ACNNNNNCTCC	4 cut(s)	131, 161, 2848, 2878
Bsc4I	CCNNNNNNNGG	6 cut(s)	459, 1239, 1395, 1904, 2586, 2879
Bse118I	RCCGGY	1 cut(s)	655
Bse1I	ACTGG	3 cut(s)	838, 1045, 1177
Bse21I	CCTNAGG	1 cut(s)	288
Bse3DI	GCAATG	3 cut(s)	1329, 1452, 2047
Bse8I	GATNNNNATC	1 cut(s)	311
BseAI	TCCGGA	1 cut(s)	879
BseBI	CCWGG	4 cut(s)	961, 1116, 1163, 1463
BseGI	GGATG	4 cut(s)	1690, 2019, 2035, 2740
BseJI	GATNNNNATC	1 cut(s)	311
BseLI	CCNNNNNNNGG	6 cut(s)	459, 1239, 1395, 1904, 2586, 2879
BseMI	GCAATG	3 cut(s)	1329, 1452, 2047
BseMII	CTCAG	6 cut(s)	302, 848, 1497, 1983, 2148, 2613
BseNI	ACTGG	3 cut(s)	838, 1045, 1177
BseRI	GAGGAG	4 cut(s)	421, 445, 1743, 2493
BseSI	GKGCMC	1 cut(s)	2302
BseYI	CCCAGC	1 cut(s)	985
BshFI	GGCC	9 cut(s)	299, 446, 545, 767, 1176, 1367, 1461, 1674, 2703
BshNI	GGYRCC	1 cut(s)	1225
BsiHKCI	CYCGRG	1 cut(s)	301
BsiSI	CCGG	4 cut(s)	656, 880, 1490, 1898
BslFI	GGGAC	1 cut(s)	2708
BslI	CCNNNNNNNGG	6 cut(s)	459, 1239, 1395, 1904, 2586, 2879
BsmAI	GTCTC	4 cut(s)	125, 204, 443, 2166
BsmFI	GGGAC	1 cut(s)	2708
BsmI	GAATGC	1 cut(s)	1576
BsnI	GGCC	9 cut(s)	299, 446, 545, 767, 1176, 1367, 1461, 1674, 2703
Bso31I	GGTCTC	1 cut(s)	443
BsoBI	CYCGRG	1 cut(s)	301
Bsp1286I	GDGCHC	2 cut(s)	32, 2302
Bsp13I	TCCGGA	1 cut(s)	879
Bsp1407I	TGTACA	2 cut(s)	1027, 2644
Bsp143I	GATC	5 cut(s)	786, 1156, 1301, 1717, 1933
Bsp1720I	GCTNAGC	1 cut(s)	981
Bsp19I	CCATGG	1 cut(s)	326
BspACI	CCGC	3 cut(s)	161, 323, 1815
BspANI	GGCC	9 cut(s)	299, 446, 545, 767, 1176, 1367, 1461, 1674, 2703
BspCNI	CTCAG	6 cut(s)	301, 849, 1498, 1982, 2147, 2612
BspEI	TCCGGA	1 cut(s)	879
BspLI	GGNNCC	3 cut(s)	300, 788, 1227
BspMAI	CTGCAG	3 cut(s)	2095, 2371, 2693
BspMI	ACCTGC	3 cut(s)	1084, 1303, 2128
BspPI	GGATC	5 cut(s)	781, 794, 1151, 1309, 1928
BspT107I	GGYRCC	1 cut(s)	1225
BspTI	CTTAAG	1 cut(s)	1601
BspTNI	GGTCTC	1 cut(s)	443
BsrDI	GCAATG	3 cut(s)	1329, 1452, 2047
BsrFI	RCCGGY	1 cut(s)	655
BsrGI	TGTACA	2 cut(s)	1027, 2644
BsrI	ACTGG	3 cut(s)	838, 1045, 1177
BssAI	RCCGGY	1 cut(s)	655
BssMI	GATC	5 cut(s)	786, 1156, 1301, 1717, 1933
BssT1I	CCWWGG	2 cut(s)	326, 2064
Bst2UI	CCWGG	4 cut(s)	961, 1116, 1163, 1463
Bst4CI	ACNGT	7 cut(s)	119, 1913, 1944, 2002, 2263, 2361, 2660
Bst6I	CTCTTC	6 cut(s)	104, 128, 148, 2065, 2322, 2571
BstAFI	CTTAAG	1 cut(s)	1601
BstAPI	GCANNNNNTGC	1 cut(s)	632
BstAUI	TGTACA	2 cut(s)	1027, 2644
BstBAI	YACGTR	1 cut(s)	2303
BstC8I	GCNNGC	9 cut(s)	657, 1459, 1618, 1813, 2374, 2444, 2689, 2701, 2804
BstDSI	CCRYGG	3 cut(s)	326, 1101, 2428
BstF5I	GGATG	4 cut(s)	1690, 2019, 2035, 2740
BstH2I	RGCGCY	1 cut(s)	674
BstHHI	GCGC	3 cut(s)	637, 673, 2493
BstKTI	GATC	5 cut(s)	789, 1159, 1304, 1720, 1936
BstMAI	GTCTC	4 cut(s)	125, 204, 443, 2166
BstMBI	GATC	5 cut(s)	786, 1156, 1301, 1717, 1933
BstMWI	GCNNNNNNNGC	5 cut(s)	11, 632, 2213, 2378, 2439
BstNI	CCWGG	4 cut(s)	961, 1116, 1163, 1463
BstNSI	RCATGY	2 cut(s)	54, 2806
BstSCI	CCNGG	5 cut(s)	959, 1114, 1161, 1461, 1896
BstSFI	CTRYAG	4 cut(s)	2091, 2367, 2689, 2897
BstSLI	GKGCMC	1 cut(s)	2302
BstV2I	GAAGAC	4 cut(s)	605, 836, 1482, 2504
BstX2I	RGATCY	3 cut(s)	786, 1301, 1933
BstXI	CCANNNNNNTGG	1 cut(s)	2030
BstYI	RGATCY	3 cut(s)	786, 1301, 1933
Bsu36I	CCTNAGG	1 cut(s)	288
BsuRI	GGCC	9 cut(s)	299, 446, 545, 767, 1176, 1367, 1461, 1674, 2703
BtgI	CCRYGG	3 cut(s)	326, 1101, 2428
BtsCI	GGATG	4 cut(s)	1690, 2019, 2035, 2740
BtsI	GCAGTG	1 cut(s)	2364
BtsIMutI	CAGTG	3 cut(s)	1593, 1949, 2364
BveI	ACCTGC	3 cut(s)	1084, 1303, 2128
Cac8I	GCNNGC	9 cut(s)	657, 1459, 1618, 1813, 2374, 2444, 2689, 2701, 2804
CaiI	CAGNNNCTG	1 cut(s)	188
CfoI	GCGC	3 cut(s)	637, 673, 2493
Cfr10I	RCCGGY	1 cut(s)	655
Cfr13I	GGNCC	3 cut(s)	298, 1366, 2755
CseI	GACGC	2 cut(s)	610, 2705
Csp6I	GTAC	7 cut(s)	422, 1028, 1293, 1412, 1487, 2153, 2645
CviQI	GTAC	7 cut(s)	422, 1028, 1293, 1412, 1487, 2153, 2645
DpnI	GATC	5 cut(s)	788, 1158, 1303, 1719, 1935
DpnII	GATC	5 cut(s)	786, 1156, 1301, 1717, 1933
DraI	TTTAAA	2 cut(s)	1096, 1515
DrdI	GACNNNNNNGTC	1 cut(s)	230
DseDI	GACNNNNNNGTC	1 cut(s)	230
EaeI	YGGCCR	1 cut(s)	765
Eam1104I	CTCTTC	6 cut(s)	104, 128, 148, 2065, 2322, 2571
EarI	CTCTTC	6 cut(s)	104, 128, 148, 2065, 2322, 2571
Eco130I	CCWWGG	2 cut(s)	326, 2064
Eco147I	AGGCCT	2 cut(s)	545, 1461
Eco24I	GRGCYC	1 cut(s)	32
Eco31I	GGTCTC	1 cut(s)	443
Eco47I	GGWCC	1 cut(s)	2755
Eco57I	CTGAAG	7 cut(s)	85, 1767, 1805, 1950, 2256, 2457, 2552
Eco72I	CACGTG	1 cut(s)	2303
Eco81I	CCTNAGG	1 cut(s)	288
Eco88I	CYCGRG	1 cut(s)	301
EcoO109I	RGGNCCY	1 cut(s)	1366
EcoRII	CCWGG	4 cut(s)	959, 1114, 1161, 1461
EcoT14I	CCWWGG	2 cut(s)	326, 2064
EcoT22I	ATGCAT	2 cut(s)	687, 1692
EcoT38I	GRGCYC	1 cut(s)	32
ErhI	CCWWGG	2 cut(s)	326, 2064
FalI	AAGNNNNNCTT	2 cut(s)	83, 115
FaqI	GGGAC	1 cut(s)	2708
FauI	CCCGC	2 cut(s)	168, 330
FauNDI	CATATG	2 cut(s)	1197, 1834
FokI	GGATG	4 cut(s)	1677, 2006, 2042, 2727
FriOI	GRGCYC	1 cut(s)	32
FspBI	CTAG	7 cut(s)	1305, 1338, 1440, 1847, 1949, 2507, 2906
GlaI	GCGC	3 cut(s)	636, 672, 2492
GsaI	CCCAGC	1 cut(s)	989
GsuI	CTGGAG	2 cut(s)	165, 803
HaeII	RGCGCY	1 cut(s)	674
HaeIII	GGCC	9 cut(s)	299, 446, 545, 767, 1176, 1367, 1461, 1674, 2703
HapII	CCGG	4 cut(s)	656, 880, 1490, 1898
HgaI	GACGC	2 cut(s)	610, 2705
HhaI	GCGC	3 cut(s)	637, 673, 2493
Hin6I	GCGC	3 cut(s)	635, 671, 2491
HinP1I	GCGC	3 cut(s)	635, 671, 2491
HincII	GTYRAC	2 cut(s)	1923, 2098
HindII	GTYRAC	2 cut(s)	1923, 2098
HindIII	AAGCTT	2 cut(s)	80, 1826
HpaI	GTTAAC	1 cut(s)	1923
HpaII	CCGG	4 cut(s)	656, 880, 1490, 1898
HphI	GGTGA	5 cut(s)	1411, 1491, 1983, 2263, 2462
Hpy99I	CGWCG	1 cut(s)	236
HpyAV	CCTTC	8 cut(s)	343, 862, 900, 1287, 1631, 1742, 2326, 2740
HpyCH4III	ACNGT	7 cut(s)	119, 1913, 1944, 2002, 2263, 2361, 2660
HpyCH4IV	ACGT	5 cut(s)	886, 1479, 1777, 2302, 2707
HpyF10VI	GCNNNNNNNGC	5 cut(s)	11, 632, 2213, 2378, 2439
HpySE526I	ACGT	5 cut(s)	886, 1479, 1777, 2302, 2707
HspAI	GCGC	3 cut(s)	635, 671, 2491
Kpn2I	TCCGGA	1 cut(s)	879
KroI	GCCGGC	1 cut(s)	655
KroNI	GCCGGC	1 cut(s)	657
KspAI	GTTAAC	1 cut(s)	1923
Kzo9I	GATC	5 cut(s)	786, 1156, 1301, 1717, 1933
LmnI	GCTCC	3 cut(s)	79, 526, 2791
LweI	GCATC	6 cut(s)	1309, 1338, 1440, 1699, 2557, 2849
MaeI	CTAG	7 cut(s)	1305, 1338, 1440, 1847, 1949, 2507, 2906
MaeII	ACGT	5 cut(s)	886, 1479, 1777, 2302, 2707
MaeIII	GTNAC	4 cut(s)	1589, 2284, 2389, 2594
MalI	GATC	5 cut(s)	788, 1158, 1303, 1719, 1935
MboI	GATC	5 cut(s)	786, 1156, 1301, 1717, 1933
MflI	RGATCY	3 cut(s)	786, 1301, 1933
MhlI	GDGCHC	2 cut(s)	32, 2302
MlsI	TGGCCA	1 cut(s)	767
MluNI	TGGCCA	1 cut(s)	767
MlyI	GAGTC	5 cut(s)	206, 398, 1740, 2206, 2731
MmeI	TCCRAC	1 cut(s)	138
Mox20I	TGGCCA	1 cut(s)	767
Mph1103I	ATGCAT	2 cut(s)	687, 1692
MroI	TCCGGA	1 cut(s)	879
MroNI	GCCGGC	1 cut(s)	655
MroXI	GAANNNNTTC	2 cut(s)	189, 1479
MscI	TGGCCA	1 cut(s)	767
MslI	CAYNNNNRTG	5 cut(s)	49, 1869, 2028, 2672, 2745
Msp20I	TGGCCA	1 cut(s)	767
MspA1I	CMGCKG	2 cut(s)	1928, 2090
MspCI	CTTAAG	1 cut(s)	1601
MspI	CCGG	4 cut(s)	656, 880, 1490, 1898
MspR9I	CCNGG	5 cut(s)	961, 1116, 1163, 1463, 1898
Mva1269I	GAATGC	1 cut(s)	1576
MvaI	CCWGG	4 cut(s)	961, 1116, 1163, 1463
MwoI	GCNNNNNNNGC	5 cut(s)	11, 632, 2213, 2378, 2439
NaeI	GCCGGC	1 cut(s)	657
NciI	CCSGG	1 cut(s)	1898
NcoI	CCATGG	1 cut(s)	326
NdeI	CATATG	2 cut(s)	1197, 1834
NdeII	GATC	5 cut(s)	786, 1156, 1301, 1717, 1933
NgoMIV	GCCGGC	1 cut(s)	655
NlaIV	GGNNCC	3 cut(s)	300, 788, 1227
NmeAIII	GCCGAG	2 cut(s)	472, 1700
NmuCI	GTSAC	1 cut(s)	1589
NsiI	ATGCAT	2 cut(s)	687, 1692
NspI	RCATGY	2 cut(s)	54, 2806
PaeI	GCATGC	1 cut(s)	2806
PasI	CCCWGGG	1 cut(s)	960
PceI	AGGCCT	2 cut(s)	545, 1461
PcsI	WCGNNNNNNNCGW	1 cut(s)	608
PctI	GAATGC	1 cut(s)	1576
PdiI	GCCGGC	1 cut(s)	657
PdmI	GAANNNNTTC	2 cut(s)	189, 1479
PfeI	GAWTC	9 cut(s)	293, 715, 1204, 1702, 1789, 1883, 2220, 2726, 2909
PflMI	CCANNNNNTGG	1 cut(s)	1239
PleI	GAGTC	5 cut(s)	206, 397, 1739, 2205, 2731
PmaCI	CACGTG	1 cut(s)	2303
PmlI	CACGTG	1 cut(s)	2303
PpsI	GAGTC	5 cut(s)	206, 397, 1739, 2205, 2731
Ppu21I	YACGTR	1 cut(s)	2303
PsiI	TTATAA	1 cut(s)	2555
Psp6I	CCWGG	4 cut(s)	959, 1114, 1161, 1461
PspCI	CACGTG	1 cut(s)	2303
PspFI	CCCAGC	1 cut(s)	985
PspGI	CCWGG	4 cut(s)	959, 1114, 1161, 1461
PspN4I	GGNNCC	3 cut(s)	300, 788, 1227
PspPI	GGNCC	3 cut(s)	298, 1366, 2755
PstI	CTGCAG	3 cut(s)	2095, 2371, 2693
PstNI	CAGNNNCTG	1 cut(s)	188
PsuI	RGATCY	3 cut(s)	786, 1301, 1933
PvuII	CAGCTG	2 cut(s)	1928, 2090
RsaI	GTAC	7 cut(s)	423, 1029, 1294, 1413, 1488, 2154, 2646
RsaNI	GTAC	7 cut(s)	422, 1028, 1293, 1412, 1487, 2153, 2645
RseI	CAYNNNNRTG	5 cut(s)	49, 1869, 2028, 2672, 2745
Sau3AI	GATC	5 cut(s)	786, 1156, 1301, 1717, 1933
Sau96I	GGNCC	3 cut(s)	298, 1366, 2755
SbfI	CCTGCAGG	1 cut(s)	2693
ScaI	AGTACT	1 cut(s)	1413
SchI	GAGTC	5 cut(s)	206, 398, 1740, 2206, 2731
ScrFI	CCNGG	5 cut(s)	961, 1116, 1163, 1463, 1898
SdaI	CCTGCAGG	1 cut(s)	2693
SduI	GDGCHC	2 cut(s)	32, 2302
SfaNI	GCATC	6 cut(s)	1309, 1338, 1440, 1699, 2557, 2849
SfcI	CTRYAG	4 cut(s)	2091, 2367, 2689, 2897
SinI	GGWCC	1 cut(s)	2755
SmiMI	CAYNNNNRTG	5 cut(s)	49, 1869, 2028, 2672, 2745
SmlI	CTYRAG	2 cut(s)	33, 1601
SmoI	CTYRAG	2 cut(s)	33, 1601
SphI	GCATGC	1 cut(s)	2806
Sse8387I	CCTGCAGG	1 cut(s)	2693
SseBI	AGGCCT	2 cut(s)	545, 1461
SsiI	CCGC	3 cut(s)	161, 323, 1815
SspMI	CTAG	7 cut(s)	1305, 1338, 1440, 1847, 1949, 2507, 2906
StuI	AGGCCT	2 cut(s)	545, 1461
StyD4I	CCNGG	5 cut(s)	959, 1114, 1161, 1461, 1896
StyI	CCWWGG	2 cut(s)	326, 2064
TaaI	ACNGT	7 cut(s)	119, 1913, 1944, 2002, 2263, 2361, 2660
TaiI	ACGT	5 cut(s)	889, 1482, 1780, 2305, 2710
TaqI	TCGA	3 cut(s)	234, 242, 1726
TaqII	GACCGA	1 cut(s)	467
TatI	WGTACW	4 cut(s)	421, 1027, 1411, 2644
TfiI	GAWTC	9 cut(s)	293, 715, 1204, 1702, 1789, 1883, 2220, 2726, 2909
TscAI	CASTG	3 cut(s)	1600, 1949, 2371
TseFI	GTSAC	1 cut(s)	1589
Tsp45I	GTSAC	1 cut(s)	1589
TspGWI	ACGGA	1 cut(s)	2733
TspRI	CASTG	3 cut(s)	1600, 1949, 2371
Van91I	CCANNNNNTGG	1 cut(s)	1239
Vha464I	CTTAAG	1 cut(s)	1601
VpaK11BI	GGWCC	1 cut(s)	2755
XapI	RAATTY	8 cut(s)	238, 247, 269, 526, 1521, 1739, 2638, 2783
XbaI	TCTAGA	2 cut(s)	1337, 2905
XceI	RCATGY	2 cut(s)	54, 2806
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2426
XmnI	GAANNNNTTC	2 cut(s)	189, 1479
XspI	CTAG	7 cut(s)	1305, 1338, 1440, 1847, 1949, 2507, 2906
ZrmI	AGTACT	1 cut(s)	1413
Zsp2I	ATGCAT	2 cut(s)	687, 1692

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.