Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0008459

Physical Location & Seq

Genomic Coordinates Forward (+)

10980122 .. 10984128

Gene Structure 4007 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G25740.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1644 bp

ATGGACGACGAGAGGATTCGAGAGCGAGAGAGACTTCAGATCGAGCAGATTCGTGAGCTTGATTTCGAGGAATTACAAGTCGAAGAAGTCGATGACCTTCACGATTCCGATTCCGATGATAATAATGATGATCTCTCTTCATTTCCTTTCTCTTCCCACGCTCAAGCTTCTGGTAACCTCGGTGATGATGAACTTATGTTCAACCCAGCTTTGGCTTCTTTACATATGTATCTTGGCGAGGTTGAAGACACTCAAAACAGAGTTTCTTTTGTGGATGGAGGAACGGTATTGAAGATCCCGCTTTTCTATCTTGAAGGAGTGGTTCTATTTCCTGAGGCAACACTCCCCCTTAGAATCATTCAGCCTAGTTTCTTGGCTGCTGTTGAGAGAGCTTTGAACCAAGCTAACGCTCCTTCTACGATAGGTGTGATTCGTGTTTACAGAGAAGGGGCTCAGTTTAAGTATGCCAGTGTGGGGACAACCGCAGAGATACGACAATACCGTCGACTTGGTGATGGTTCATTCAATGTTATTACTCGTGGACAACAACGTTTCCGTTTAAAGCATCGCTGGACTGACGTTGAAGGATTTACTTGCGGAGAGGTTCAAATTGTTGATGAAGATGTGCCCTTGAGGACTCCCAGGGACGCGTTTGGAAAACTGGTACCGCTAAGCAAGTTGCGAGGTCGCTATCCCTTGGGTACAGCATCTTTATCTACACCTCTTAGAGATATGGACGCACAGTCTGAAGCAAATTCTGAAGAAAGTTTTGAAAGTGCTCTTTCTCCGTCAGAAAAAAGACTTCATTATTCAGTAGTTGACTCAATATTTTGTAACTCAACAAGTAGTGATGATGATCAAGTAGTCAGCACCTCTACAGTCCAATCTAGTGGGTCTAATCCATACAGCTTGAGGTCCATTGGATGTTTAGCTTCTAGCCATGACAACGAAAATGAAGACGAGCAATCGGCAATTGGCAAGACTCCTGTTTCACAAGAGAAATATCAGAAGCAAAATAGGCTGGCAAGTTTCCGGCAAAATACTGATCTAAGCCGATTCCGTATGACGCCAAGAGCATTTTGGCCATTCTGGGCGTATAGGATGTTTGACTCATATTATCTTGCTCAAAGAGCAGTCGATCTGTGGAAGCAAATAGTTGGGGTTCCAAACATGGAGGCTTTTGTGAATAAACCAGATATTCTATCCTTTTCCATTGCGAGTAAAATTCCCGTGTCTGAGTCAATTAGACAAGAGCTCTTGGAGCTGGATGGAGTCTCCTATAGATTGCAGCGAGAAATTGAATTGCTTGAAAGTTTTGATCGTGTTCGATGTATACACTGTCAGACTGTCATAGCAAGAAGAAAAGACATGTTGGTTATGTCTAATGAAGGTCCTCTTGGTGCCTACGTAAACCCACATGGCTATGTCCACGAGATAATGACCTTTTACAAAGCAAATGACATAGCGCTTAGAGGTAGACCTGTTAAAAAGGACAGCTGGTTTCCTGGGTATGCTTGGACAATTGCAAACTGTGCGACGTGCGAAACCCAGCTTGGTTGGCATTTCACAGCGACAAACAAGAAGTTGAAGCCATCGTCTTTTTGGGCAGTTCGTGGCTCACAGGTTGCAGATGACATGCGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0002009 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006464 GO:0006508 GO:0006511 GO:0006807 GO:0007275 GO:0007423 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009653 GO:0009790 GO:0009887 GO:0009888 GO:0009987 GO:0010498 GO:0016567 GO:0019538 GO:0019941 GO:0030163 GO:0031461 GO:0031464 GO:0032446 GO:0032501 GO:0032502 GO:0032991 GO:0033333 GO:0033334 GO:0033339 GO:0035107 GO:0035113 GO:0035118 GO:0035138 GO:0035239 GO:0035295 GO:0036211 GO:0042471 GO:0042472 GO:0043161 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043583 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044424 GO:0044464 GO:0048513 GO:0048562 GO:0048568 GO:0048598 GO:0048729 GO:0048731 GO:0048736 GO:0048839 GO:0048856 GO:0051603 GO:0060173 GO:0060429 GO:0060562 GO:0070647 GO:0071599 GO:0071600 GO:0071704 GO:0080008 GO:0090596 GO:1901564 GO:1901565 GO:1901575 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LON_substr_bdg Yippee-Mis18

Protein Analysis

547

Amino Acids

62.05

Weight (kDa)

5.2

Isoelectric Point (pI)

41.64

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LON_substr_bdg	PF02190	33 - 372	2.1e-30	ATP-dependent protease La (LON) substrate-binding domain
Yippee-Mis18	PF03226	378 - 467	1.3e-07	Yippee zinc-binding/DNA-binding /Mis18, centromere assembly

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008459)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G25740 AT2G25740
fragaria_vesca	FvH4_2g35320 FvH4_2g35320 FvH4_2g35320 FvH4_2g35320
malus_domestica	MD08G1111400.v1.1 MD15G1090900.v1.1
prunus_persica	Prupe.1G445300_v2.0.a1 Prupe.1G445300_v2.0.a1
pyrus_communis	pycom08g09250 pycom15g08480 pycom15g08490
rosa_chinensis	RchiOBHm_Chr6g0306601
rosa_laevigata	RLG00000010781
rosa_multiflora	Rmu_sc0017624.1_g000002
rosa_roxburghii	Rroxscaffold_7G00161620
rosa_rugosa	Rorug06G0350900
rosa_samantha	Rh6AG463200 Rh6BG437700 Rh6CG477500 Rh6DG464000
rosa_wichuraiana	Rw6G040360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	501
Acc65I	GGTACC	1 cut(s)	664
AccB1I	GGYRCC	2 cut(s)	664, 1400
AccI	GTMKAC	3 cut(s)	505, 1333, 1477
AccII	CGCG	1 cut(s)	650
AciI	CCGC	4 cut(s)	299, 483, 597, 668
AclI	AACGTT	1 cut(s)	550
AclWI	GGATC	1 cut(s)	289
AcoI	YGGCCR	1 cut(s)	1082
AcsI	RAATTY	2 cut(s)	754, 1224
AcuI	CTGAAG	3 cut(s)	20, 768, 780
AcyI	GRCGYC	1 cut(s)	1067
AfaI	GTAC	2 cut(s)	666, 703
AfeI	AGCGCT	1 cut(s)	1467
AfiI	CCNNNNNNNGG	2 cut(s)	211, 474
AflIII	ACRYGT	2 cut(s)	648, 1368
AhdI	GACNNNNNGTC	1 cut(s)	742
AjiI	CACGTC	1 cut(s)	1539
AjnI	CCWGG	2 cut(s)	641, 1504
AjuI	GAANNNNNNNTTGG	4 cut(s)	1380, 1412, 1536, 1568
Alw21I	GWGCWC	2 cut(s)	781, 1257
Alw26I	GTCTC	2 cut(s)	25, 1279
AlwI	GGATC	1 cut(s)	289
Aor51HI	AGCGCT	1 cut(s)	1467
AoxI	GGCC	1 cut(s)	1082
ApeKI	GCWGC	2 cut(s)	377, 1288
ApoI	RAATTY	2 cut(s)	754, 1224
Asp718I	GGTACC	1 cut(s)	664
AspLEI	GCGC	2 cut(s)	1468, 1641
AspS9I	GGNCC	2 cut(s)	915, 1391
AsuHPI	GGTGA	2 cut(s)	194, 524
AvaII	GGWCC	2 cut(s)	915, 1391
AxyI	CCTNAGG	1 cut(s)	333
BaeGI	GKGCMC	1 cut(s)	630
BaeI	ACNNNNGTAYC	2 cut(s)	212, 245
BalI	TGGCCA	1 cut(s)	1084
BanI	GGYRCC	2 cut(s)	664, 1400
BanII	GRGCYC	2 cut(s)	454, 1257
BauI	CACGAG	2 cut(s)	537, 1430
BbsI	GAAGAC	2 cut(s)	252, 963
Bbv12I	GWGCWC	2 cut(s)	781, 1257
BbvI	GCAGC	2 cut(s)	364, 1300
BccI	CCATC	4 cut(s)	269, 509, 1262, 1600
BciT130I	CCWGG	2 cut(s)	643, 1506
BclI	TGATCA	1 cut(s)	856
BcoDI	GTCTC	2 cut(s)	25, 1279
BfaI	CTAG	3 cut(s)	366, 888, 936
BfmI	CTRYAG	2 cut(s)	876, 1279
BfoI	RGCGCY	1 cut(s)	1469
BisI	GCNGC	2 cut(s)	378, 1289
BlpI	GCTNAGC	1 cut(s)	671
BlsI	GCNGC	2 cut(s)	379, 1290
Bme1390I	CCNGG	2 cut(s)	643, 1506
Bme18I	GGWCC	2 cut(s)	915, 1391
BmeRI	GACNNNNNGTC	1 cut(s)	742
BmgBI	CACGTC	1 cut(s)	1539
BmgT120I	GGNCC	2 cut(s)	915, 1391
BmiI	GGNNCC	3 cut(s)	666, 1164, 1402
BmrFI	CCNGG	2 cut(s)	643, 1506
BmsI	GCATC	2 cut(s)	574, 716
BpiI	GAAGAC	2 cut(s)	252, 963
Bpu1102I	GCTNAGC	1 cut(s)	671
BpuEI	CTTGAG	3 cut(s)	147, 652, 931
BsaAI	YACGTR	1 cut(s)	1408
BsaBI	GATNNNNATC	1 cut(s)	855
BsaHI	GRCGYC	1 cut(s)	1067
BsaJI	CCNNGG	5 cut(s)	178, 641, 642, 696, 1505
BsaXI	ACNNNNNCTCC	2 cut(s)	270, 300
Bsc4I	CCNNNNNNNGG	2 cut(s)	211, 474
Bse1I	ACTGG	2 cut(s)	468, 666
Bse21I	CCTNAGG	1 cut(s)	333
Bse3DI	GCAATG	1 cut(s)	1212
Bse8I	GATNNNNATC	1 cut(s)	855
BseBI	CCWGG	2 cut(s)	643, 1506
BseDI	CCNNGG	5 cut(s)	178, 641, 642, 696, 1505
BseGI	GGATG	4 cut(s)	280, 929, 1107, 1273
BseJI	GATNNNNATC	1 cut(s)	855
BseLI	CCNNNNNNNGG	2 cut(s)	211, 474
BseMI	GCAATG	1 cut(s)	1212
BseMII	CTCAG	3 cut(s)	324, 467, 1227
BseNI	ACTGG	2 cut(s)	468, 666
BseSI	GKGCMC	1 cut(s)	630
BseXI	GCAGC	2 cut(s)	364, 1300
BseYI	CCCAGC	2 cut(s)	205, 1548
Bsh1236I	CGCG	1 cut(s)	650
BshFI	GGCC	1 cut(s)	1084
BshNI	GGYRCC	2 cut(s)	664, 1400
BsiHKAI	GWGCWC	2 cut(s)	781, 1257
BsiSI	CCGG	1 cut(s)	1033
BslFI	GGGAC	2 cut(s)	490, 659
BslI	CCNNNNNNNGG	2 cut(s)	211, 474
BsmAI	GTCTC	2 cut(s)	25, 1279
BsmFI	GGGAC	2 cut(s)	490, 659
BsnI	GGCC	1 cut(s)	1084
Bsp1286I	GDGCHC	4 cut(s)	454, 630, 781, 1257
Bsp143I	GATC	7 cut(s)	39, 130, 294, 856, 1045, 1138, 1318
Bsp1720I	GCTNAGC	1 cut(s)	671
BspACI	CCGC	4 cut(s)	299, 483, 597, 668
BspANI	GGCC	1 cut(s)	1084
BspCNI	CTCAG	3 cut(s)	325, 466, 1228
BspFNI	CGCG	1 cut(s)	650
BspLI	GGNNCC	3 cut(s)	666, 1164, 1402
BspPI	GGATC	1 cut(s)	289
BspT107I	GGYRCC	2 cut(s)	664, 1400
BsrDI	GCAATG	1 cut(s)	1212
BsrI	ACTGG	2 cut(s)	468, 666
BssECI	CCNNGG	5 cut(s)	178, 641, 642, 696, 1505
BssMI	GATC	7 cut(s)	39, 130, 294, 856, 1045, 1138, 1318
BssNAI	GTATAC	1 cut(s)	1334
BssNI	GRCGYC	1 cut(s)	1067
BssSI	CACGAG	2 cut(s)	537, 1430
BssT1I	CCWWGG	1 cut(s)	696
Bst1107I	GTATAC	1 cut(s)	1334
Bst2BI	CACGAG	2 cut(s)	537, 1430
Bst2UI	CCWGG	2 cut(s)	643, 1506
Bst4CI	ACNGT	7 cut(s)	286, 503, 744, 880, 1340, 1348, 1532
Bst6I	CTCTTC	2 cut(s)	142, 157
BstACI	GRCGYC	1 cut(s)	1067
BstAPI	GCANNNNNTGC	1 cut(s)	1532
BstBAI	YACGTR	1 cut(s)	1408
BstC8I	GCNNGC	1 cut(s)	1023
BstDEI	CTNAG	8 cut(s)	333, 350, 453, 671, 725, 1049, 1236, 1469
BstEII	GGTNACC	1 cut(s)	173
BstF5I	GGATG	4 cut(s)	280, 929, 1107, 1273
BstFNI	CGCG	1 cut(s)	650
BstH2I	RGCGCY	1 cut(s)	1469
BstHHI	GCGC	2 cut(s)	1468, 1641
BstKTI	GATC	7 cut(s)	42, 133, 297, 859, 1048, 1141, 1321
BstMAI	GTCTC	2 cut(s)	25, 1279
BstMBI	GATC	7 cut(s)	39, 130, 294, 856, 1045, 1138, 1318
BstMWI	GCNNNNNNNGC	5 cut(s)	1018, 1130, 1261, 1532, 1558
BstNI	CCWGG	2 cut(s)	643, 1506
BstNSI	RCATGY	2 cut(s)	1372, 1639
BstPI	GGTNACC	1 cut(s)	173
BstSCI	CCNGG	2 cut(s)	641, 1504
BstSFI	CTRYAG	2 cut(s)	876, 1279
BstSLI	GKGCMC	1 cut(s)	630
BstSNI	TACGTA	1 cut(s)	1408
BstUI	CGCG	1 cut(s)	650
BstV1I	GCAGC	2 cut(s)	364, 1300
BstV2I	GAAGAC	2 cut(s)	252, 963
BstX2I	RGATCY	1 cut(s)	294
BstXI	CCANNNNNNTGG	1 cut(s)	890
BstYI	RGATCY	1 cut(s)	294
BstZ17I	GTATAC	1 cut(s)	1334
Bsu36I	CCTNAGG	1 cut(s)	333
BsuRI	GGCC	1 cut(s)	1084
BtgZI	GCGATG	1 cut(s)	551
BtrI	CACGTC	1 cut(s)	1539
BtsCI	GGATG	4 cut(s)	280, 929, 1107, 1273
BtsIMutI	CAGTG	2 cut(s)	475, 1336
Cac8I	GCNNGC	1 cut(s)	1023
CfoI	GCGC	2 cut(s)	1468, 1641
Cfr13I	GGNCC	2 cut(s)	915, 1391
CseI	GACGC	3 cut(s)	656, 746, 1075
Csp6I	GTAC	2 cut(s)	665, 702
CviAII	CATG	5 cut(s)	941, 1171, 1369, 1418, 1636
CviQI	GTAC	2 cut(s)	665, 702
DdeI	CTNAG	8 cut(s)	333, 350, 453, 671, 725, 1049, 1236, 1469
DpnI	GATC	7 cut(s)	41, 132, 296, 858, 1047, 1140, 1320
DpnII	GATC	7 cut(s)	39, 130, 294, 856, 1045, 1138, 1318
DraI	TTTAAA	1 cut(s)	561
DrdI	GACNNNNNNGTC	1 cut(s)	501
DriI	GACNNNNNGTC	1 cut(s)	742
DseDI	GACNNNNNNGTC	1 cut(s)	501
EaeI	YGGCCR	1 cut(s)	1082
Eam1104I	CTCTTC	2 cut(s)	142, 157
Eam1105I	GACNNNNNGTC	1 cut(s)	742
EarI	CTCTTC	2 cut(s)	142, 157
Ecl136II	GAGCTC	1 cut(s)	1255
Eco105I	TACGTA	1 cut(s)	1408
Eco130I	CCWWGG	1 cut(s)	696
Eco24I	GRGCYC	2 cut(s)	454, 1257
Eco47I	GGWCC	2 cut(s)	915, 1391
Eco47III	AGCGCT	1 cut(s)	1467
Eco53kI	GAGCTC	1 cut(s)	1255
Eco57I	CTGAAG	3 cut(s)	20, 768, 780
Eco81I	CCTNAGG	1 cut(s)	333
Eco91I	GGTNACC	1 cut(s)	173
EcoICRI	GAGCTC	1 cut(s)	1255
EcoO109I	RGGNCCY	1 cut(s)	1391
EcoO65I	GGTNACC	1 cut(s)	173
EcoRII	CCWGG	2 cut(s)	641, 1504
EcoT14I	CCWWGG	1 cut(s)	696
EcoT38I	GRGCYC	2 cut(s)	454, 1257
ErhI	CCWWGG	1 cut(s)	696
FaeI	CATG	5 cut(s)	944, 1174, 1372, 1421, 1639
FalI	AAGNNNNNCTT	2 cut(s)	1380, 1412
FaqI	GGGAC	2 cut(s)	490, 659
FatI	CATG	5 cut(s)	940, 1170, 1368, 1417, 1635
FauI	CCCGC	1 cut(s)	306
FauNDI	CATATG	1 cut(s)	225
FbaI	TGATCA	1 cut(s)	856
FblI	GTMKAC	3 cut(s)	505, 1333, 1477
Fnu4HI	GCNGC	2 cut(s)	378, 1289
FokI	GGATG	4 cut(s)	287, 936, 1114, 1280
FriOI	GRGCYC	2 cut(s)	454, 1257
Fsp4HI	GCNGC	2 cut(s)	378, 1289
FspBI	CTAG	3 cut(s)	366, 888, 936
GlaI	GCGC	2 cut(s)	1467, 1640
GluI	GCNGC	2 cut(s)	378, 1289
GsaI	CCCAGC	2 cut(s)	209, 1552
HaeII	RGCGCY	1 cut(s)	1469
HaeIII	GGCC	1 cut(s)	1084
HapII	CCGG	1 cut(s)	1033
HgaI	GACGC	3 cut(s)	656, 746, 1075
HhaI	GCGC	2 cut(s)	1468, 1641
Hin1I	GRCGYC	1 cut(s)	1067
Hin1II	CATG	5 cut(s)	944, 1174, 1372, 1421, 1639
Hin6I	GCGC	2 cut(s)	1466, 1639
HinP1I	GCGC	2 cut(s)	1466, 1639
HincII	GTYRAC	2 cut(s)	506, 820
HindII	GTYRAC	2 cut(s)	506, 820
HindIII	AAGCTT	1 cut(s)	165
HpaII	CCGG	1 cut(s)	1033
HphI	GGTGA	2 cut(s)	194, 524
Hpy166II	GTNNAC	8 cut(s)	439, 506, 542, 820, 1334, 1411, 1429, 1478
Hpy188I	TCNGA	9 cut(s)	39, 109, 115, 748, 760, 793, 1008, 1237, 1344
Hpy188III	TCNNGA	5 cut(s)	20, 53, 101, 311, 332
Hpy8I	GTNNAC	8 cut(s)	439, 506, 542, 820, 1334, 1411, 1429, 1478
Hpy99I	CGWCG	3 cut(s)	11, 507, 1540
HpyAV	CCTTC	6 cut(s)	107, 308, 423, 440, 578, 1382
HpyCH4III	ACNGT	7 cut(s)	286, 503, 744, 880, 1340, 1348, 1532
HpyCH4IV	ACGT	4 cut(s)	550, 579, 1407, 1538
HpyCH4V	TGCA	3 cut(s)	1288, 1526, 1628
HpyF10VI	GCNNNNNNNGC	5 cut(s)	1018, 1130, 1261, 1532, 1558
HpyF3I	CTNAG	8 cut(s)	333, 350, 453, 671, 725, 1049, 1236, 1469
HpySE526I	ACGT	4 cut(s)	550, 579, 1407, 1538
Hsp92I	GRCGYC	1 cut(s)	1067
Hsp92II	CATG	5 cut(s)	944, 1174, 1372, 1421, 1639
HspAI	GCGC	2 cut(s)	1466, 1639
KpnI	GGTACC	1 cut(s)	668
Ksp22I	TGATCA	1 cut(s)	856
Kzo9I	GATC	7 cut(s)	39, 130, 294, 856, 1045, 1138, 1318
LmnI	GCTCC	2 cut(s)	415, 1261
Lsp1109I	GCAGC	2 cut(s)	364, 1300
LweI	GCATC	2 cut(s)	574, 716
MaeI	CTAG	3 cut(s)	366, 888, 936
MaeII	ACGT	4 cut(s)	550, 579, 1407, 1538
MaeIII	GTNAC	2 cut(s)	173, 833
MalI	GATC	7 cut(s)	41, 132, 296, 858, 1047, 1140, 1320
MboI	GATC	7 cut(s)	39, 130, 294, 856, 1045, 1138, 1318
MboII	GAAGA	9 cut(s)	95, 129, 144, 257, 304, 632, 773, 968, 1371
MfeI	CAATTG	2 cut(s)	972, 1521
MflI	RGATCY	1 cut(s)	294
MhlI	GDGCHC	4 cut(s)	454, 630, 781, 1257
MlsI	TGGCCA	1 cut(s)	1084
MluCI	AATT	9 cut(s)	71, 609, 754, 972, 1224, 1242, 1296, 1301, 1521
MluI	ACGCGT	1 cut(s)	648
MluNI	TGGCCA	1 cut(s)	1084
MlyI	GAGTC	6 cut(s)	631, 815, 976, 1103, 1247, 1281
Mox20I	TGGCCA	1 cut(s)	1084
MscI	TGGCCA	1 cut(s)	1084
MseI	TTAA	3 cut(s)	459, 560, 1485
MslI	CAYNNNNRTG	1 cut(s)	1422
Msp20I	TGGCCA	1 cut(s)	1084
MspA1I	CMGCKG	1 cut(s)	1497
MspI	CCGG	1 cut(s)	1033
MspR9I	CCNGG	2 cut(s)	643, 1506
MunI	CAATTG	2 cut(s)	972, 1521
MvaI	CCWGG	2 cut(s)	643, 1506
MvnI	CGCG	1 cut(s)	650
MwoI	GCNNNNNNNGC	5 cut(s)	1018, 1130, 1261, 1532, 1558
NdeI	CATATG	1 cut(s)	225
NdeII	GATC	7 cut(s)	39, 130, 294, 856, 1045, 1138, 1318
NlaIII	CATG	5 cut(s)	944, 1174, 1372, 1421, 1639
NlaIV	GGNNCC	3 cut(s)	666, 1164, 1402
NspI	RCATGY	2 cut(s)	1372, 1639
PasI	CCCWGGG	1 cut(s)	642
PciI	ACATGT	1 cut(s)	1368
PcsI	WCGNNNNNNNCGW	2 cut(s)	87, 499
PfeI	GAWTC	7 cut(s)	16, 49, 104, 110, 354, 430, 1056
PkrI	GCNGC	2 cut(s)	379, 1290
PleI	GAGTC	6 cut(s)	631, 815, 976, 1103, 1246, 1280
PpsI	GAGTC	6 cut(s)	631, 815, 976, 1103, 1246, 1280
Ppu21I	YACGTR	1 cut(s)	1408
PpuMI	RGGWCCY	1 cut(s)	1391
PscI	ACATGT	1 cut(s)	1368
Psp124BI	GAGCTC	1 cut(s)	1257
Psp1406I	AACGTT	1 cut(s)	550
Psp5II	RGGWCCY	1 cut(s)	1391
Psp6I	CCWGG	2 cut(s)	641, 1504
PspEI	GGTNACC	1 cut(s)	173
PspFI	CCCAGC	2 cut(s)	205, 1548
PspGI	CCWGG	2 cut(s)	641, 1504
PspN4I	GGNNCC	3 cut(s)	666, 1164, 1402
PspPI	GGNCC	2 cut(s)	915, 1391
PspPPI	RGGWCCY	1 cut(s)	1391
PsuI	RGATCY	1 cut(s)	294
PvuII	CAGCTG	1 cut(s)	1497
RsaI	GTAC	2 cut(s)	666, 703
RsaNI	GTAC	2 cut(s)	665, 702
RseI	CAYNNNNRTG	1 cut(s)	1422
SacI	GAGCTC	1 cut(s)	1257
SalI	GTCGAC	1 cut(s)	504
SaqAI	TTAA	3 cut(s)	459, 560, 1485
SatI	GCNGC	2 cut(s)	378, 1289
Sau3AI	GATC	7 cut(s)	39, 130, 294, 856, 1045, 1138, 1318
Sau96I	GGNCC	2 cut(s)	915, 1391
SchI	GAGTC	6 cut(s)	631, 815, 976, 1103, 1247, 1281
ScrFI	CCNGG	2 cut(s)	643, 1506
SduI	GDGCHC	4 cut(s)	454, 630, 781, 1257
SfaNI	GCATC	2 cut(s)	574, 716
SfcI	CTRYAG	2 cut(s)	876, 1279
SinI	GGWCC	2 cut(s)	915, 1391
SmiMI	CAYNNNNRTG	1 cut(s)	1422
SmlI	CTYRAG	3 cut(s)	162, 631, 910
SmoI	CTYRAG	3 cut(s)	162, 631, 910
SnaBI	TACGTA	1 cut(s)	1408
Sse9I	AATT	9 cut(s)	71, 609, 754, 972, 1224, 1242, 1296, 1301, 1521
SsiI	CCGC	4 cut(s)	299, 483, 597, 668
SspI	AATATT	1 cut(s)	828
SspMI	CTAG	3 cut(s)	366, 888, 936
SstI	GAGCTC	1 cut(s)	1257
StyD4I	CCNGG	2 cut(s)	641, 1504
StyI	CCWWGG	1 cut(s)	696
TaaI	ACNGT	7 cut(s)	286, 503, 744, 880, 1340, 1348, 1532
TaiI	ACGT	4 cut(s)	553, 582, 1410, 1541
TaqI	TCGA	8 cut(s)	19, 42, 66, 81, 90, 505, 1137, 1327
TasI	AATT	9 cut(s)	71, 609, 754, 972, 1224, 1242, 1296, 1301, 1521
TfiI	GAWTC	7 cut(s)	16, 49, 104, 110, 354, 430, 1056
Tru1I	TTAA	3 cut(s)	459, 560, 1485
Tru9I	TTAA	3 cut(s)	459, 560, 1485
TscAI	CASTG	2 cut(s)	475, 1343
TseI	GCWGC	2 cut(s)	377, 1288
TspDTI	ATGAA	7 cut(s)	129, 204, 510, 633, 794, 969, 1401
TspGWI	ACGGA	3 cut(s)	545, 777, 1049
TspRI	CASTG	2 cut(s)	475, 1343
VpaK11BI	GGWCC	2 cut(s)	915, 1391
XapI	RAATTY	2 cut(s)	754, 1224
XceI	RCATGY	2 cut(s)	1372, 1639
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1077, 1599
XmiI	GTMKAC	3 cut(s)	505, 1333, 1477
XspI	CTAG	3 cut(s)	366, 888, 936

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.