Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6B

Orthogroup ID

OG0008459

Physical Location & Seq

Genomic Coordinates Forward (+)

65681339 .. 65685702

Gene Structure 4364 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6BG437700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1620 bp

ATGGCCGACCACGAACGCCTTCTGGCGAGAGAGCGGCTACAGATCGAGCAGATTCGAGCACTCGATCTCGAGGAGCTGGAGGTCGAGGAGGTCGATGACGACTACAACGACGACTCTTCCGCCGACGACGCCGCCGCCGCCGCCACTGGTCGCGGCATGGCTGATGAATATACCTTCAATACTTGTTTGGCTTCATTGCATACGTATCTTGGCGAGGTTGAAGACACTCATCGTAGGATGGCGTTTTTGGATGGCGGTGCGGTATTGAACCTCCCAATCTTCTATCTCGAAGGAATTGTCCTGTTCCCAGACGCTACCCTTCCACTAAGAGTTATTCAACCCAATTTTGTAGTCGCTATTGAGAGAGCACTATCCCAAGTTGATGCTCCTTATACCATTGGTGTGATTCGTGTTTACAGAGATCCCAACAATAGAAGCATAAAGTTTGCAAATATTGGGACAACTGCGGAGATTCGCCAATATAGGAGATTAGAGGATGGCTCACTGAACGTGGTAACCCGTGGTCAACAGCGATTTCGTCTTAGACGCCGTTGGATTGATGTGGAAGGAGCGCCATACGGGGAAATCCAAATTATAGAAGAAGATGTACCATTGAGGGCTCCACGGGCTGCATTTGGAGATCTGGCACCATTTAGTAATCGAAAAGGCCATAGTTTCCCGCGTGCAATGCCTTCGCACGCTTCTCGTGGAAATTCAAATGGATCTATGGATGTGGACAATGACTCAGAGGCAAATTCAGATGAAAGCTTTGAGAGTGCACTTTCTTTGACAGAAAAGGGAATTCACCAATCTGCAATTGAATCCTATTATGGATCTGATGTGTCAACAAGCAGTGATGGTGAGAAGTCAGAATTCTTATCTCAAGGATCACAATCAAAAGACTCTGATTCCACAGATTCATTGCATTCGTTCCCTGAGAGTTTGGTTGATTTGGGGAGCAGTTCCATATCGGAGATGCAATCATCCAAACAGAAAGATCCAAGTAGTTGGAGAAATACAGACTCTAAACAGATACGTAGAGTTCCAAGAGCATTCTGGCCCTATTGGGTATATCGCATGTATGACTCCTATTGTCTTGCTCAAGGAGTGGCAGATATGTGGAAACAGATAGTTGGGGCACCATTAATGGATGGTCTGGTGAAGAAGCCTGATCTTTTGTCATTTTACATCGCTAGTAAACTTCCTGTTTCTGAATCTACAAGGCAGGAGCTTTTGGAGATTGATGGTATTTCATATAGGTTACGTCGGGAAATTGAGTTGCTTCAGACTGTTAATCTTCTCCGGTGTAAAACTTGTCAGACTGTTTTTGCAAGGCGGAGTGATATGCTAGTGATGTCGAGTGATGGTCCTCTTGGTGCTTATGTAAACCCCTATGGTTGTGTACATGAGATAATGACTCTCTACAAAGCAACTGGCTTGGCACTCGTAGGTTCAGCAGTGAAAGAATACAGCTGGTTTCCTGGGTATGCATGGACAGTAACAAACTGTGCCACCTGTGAAACTCAAATGGGTTGGCTCTTCACAGCCACAAAAAAGAATTTGAAGCCTAAATTGTTTTGGGGGATTCGGAGTTCCCAAGTTTCTGATGACTTGCACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0002009 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006464 GO:0006508 GO:0006511 GO:0006807 GO:0007275 GO:0007423 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009653 GO:0009790 GO:0009887 GO:0009888 GO:0009987 GO:0010498 GO:0016567 GO:0019538 GO:0019941 GO:0030163 GO:0031461 GO:0031464 GO:0032446 GO:0032501 GO:0032502 GO:0032991 GO:0033333 GO:0033334 GO:0033339 GO:0035107 GO:0035113 GO:0035118 GO:0035138 GO:0035239 GO:0035295 GO:0036211 GO:0042471 GO:0042472 GO:0043161 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043583 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044424 GO:0044464 GO:0048513 GO:0048562 GO:0048568 GO:0048598 GO:0048729 GO:0048731 GO:0048736 GO:0048839 GO:0048856 GO:0051603 GO:0060173 GO:0060429 GO:0060562 GO:0070647 GO:0071599 GO:0071600 GO:0071704 GO:0080008 GO:0090596 GO:1901564 GO:1901565 GO:1901575 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LON_substr_bdg Yippee-Mis18

Protein Analysis

539

Amino Acids

60.49

Weight (kDa)

5.09

Isoelectric Point (pI)

50.52

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LON_substr_bdg	PF02190	90 - 214	3.2e-22	ATP-dependent protease La (LON) substrate-binding domain
Yippee-Mis18	PF03226	434 - 533	1.4e-07	Yippee zinc-binding/DNA-binding /Mis18, centromere assembly

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008459)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G25740 AT2G25740
fragaria_vesca	FvH4_2g35320 FvH4_2g35320 FvH4_2g35320 FvH4_2g35320
malus_domestica	MD08G1111400.v1.1 MD15G1090900.v1.1
prunus_persica	Prupe.1G445300_v2.0.a1 Prupe.1G445300_v2.0.a1
pyrus_communis	pycom08g09250 pycom15g08480 pycom15g08490
rosa_chinensis	RchiOBHm_Chr6g0306601
rosa_laevigata	RLG00000010781
rosa_multiflora	Rmu_sc0017624.1_g000002
rosa_roxburghii	Rroxscaffold_7G00161620
rosa_rugosa	Rorug06G0350900
rosa_samantha	Rh6AG463200 Rh6BG437700 Rh6CG477500 Rh6DG464000
rosa_wichuraiana	Rw6G040360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	646, 1138
AccBSI	CCGCTC	1 cut(s)	34
AccII	CGCG	2 cut(s)	153, 682
AclWI	GGATC	5 cut(s)	416, 730, 841, 895, 992
AcoI	YGGCCR	1 cut(s)	3
AcsI	RAATTY	5 cut(s)	712, 754, 801, 872, 1558
AcuI	CTGAAG	1 cut(s)	1268
AcyI	GRCGYC	2 cut(s)	129, 547
AfaI	GTAC	2 cut(s)	609, 1404
AgsI	TTSAA	7 cut(s)	178, 221, 268, 338, 717, 821, 1564
AjnI	CCWGG	1 cut(s)	1480
AloI	GAACNNNNNNTCC	2 cut(s)	1576, 1608
AluBI	AGCT	4 cut(s)	76, 768, 1231, 1473
AluI	AGCT	4 cut(s)	76, 768, 1231, 1473
Alw21I	GWGCWC	3 cut(s)	61, 370, 781
Alw44I	GTGCAC	1 cut(s)	777
AlwI	GGATC	5 cut(s)	416, 730, 841, 895, 992
Ama87I	CYCGRG	1 cut(s)	68
AoxI	GGCC	3 cut(s)	3, 667, 1058
ApaLI	GTGCAC	1 cut(s)	777
ApeKI	GCWGC	1 cut(s)	629
ApoI	RAATTY	5 cut(s)	712, 754, 801, 872, 1558
ArsI	GACNNNNNNTTYG	2 cut(s)	282, 314
AseI	ATTAAT	1 cut(s)	1145
Asp700I	GAANNNNTTC	1 cut(s)	18
AspLEI	GCGC	1 cut(s)	574
AspS9I	GGNCC	2 cut(s)	1059, 1367
AsuHPI	GGTGA	3 cut(s)	797, 872, 1171
AvaI	CYCGRG	1 cut(s)	68
AvaII	GGWCC	1 cut(s)	1367
BaeGI	GKGCMC	2 cut(s)	781, 1141
BanI	GGYRCC	2 cut(s)	646, 1138
BanII	GRGCYC	1 cut(s)	622
BarI	GAAGNNNNNNTAC	2 cut(s)	591, 623
BauI	CACGAG	1 cut(s)	705
BbsI	GAAGAC	1 cut(s)	228
Bbv12I	GWGCWC	3 cut(s)	61, 370, 781
BbvI	GCAGC	1 cut(s)	616
BccI	CCATC	7 cut(s)	232, 245, 491, 851, 1145, 1238, 1358
BceAI	ACGGC	1 cut(s)	534
BcgI	CGANNNNNNTGC	4 cut(s)	675, 686, 709, 720
BciT130I	CCWGG	1 cut(s)	1482
BfaI	CTAG	2 cut(s)	1194, 1349
BfmI	CTRYAG	1 cut(s)	38
BfoI	RGCGCY	1 cut(s)	575
BglII	AGATCT	1 cut(s)	640
BisI	GCNGC	7 cut(s)	35, 132, 135, 138, 141, 154, 630
BlsI	GCNGC	7 cut(s)	36, 133, 136, 139, 142, 155, 631
Bme1390I	CCNGG	1 cut(s)	1482
Bme18I	GGWCC	1 cut(s)	1367
BmeT110I	CYCGRG	1 cut(s)	68
BmgT120I	GGNCC	2 cut(s)	1059, 1367
BmiI	GGNNCC	3 cut(s)	621, 648, 1140
BmrFI	CCNGG	1 cut(s)	1482
BmsI	GCATC	2 cut(s)	373, 966
BpiI	GAAGAC	1 cut(s)	228
BplI	GAGNNNNNCTC	2 cut(s)	485, 517
BpmI	CTGGAG	1 cut(s)	98
BpuEI	CTTGAG	2 cut(s)	867, 1086
BsaAI	YACGTR	2 cut(s)	204, 1037
BsaBI	GATNNNNATC	1 cut(s)	892
BsaHI	GRCGYC	2 cut(s)	129, 547
BsaJI	CCNNGG	3 cut(s)	520, 623, 1481
BsaWI	WCCGGW	1 cut(s)	1302
Bse1I	ACTGG	2 cut(s)	151, 1438
Bse3DI	GCAATG	3 cut(s)	194, 693, 920
Bse8I	GATNNNNATC	1 cut(s)	892
BseBI	CCWGG	1 cut(s)	1482
BseDI	CCNNGG	3 cut(s)	520, 623, 1481
BseGI	GGATG	6 cut(s)	243, 256, 502, 736, 983, 1156
BseJI	GATNNNNATC	1 cut(s)	892
BseMI	GCAATG	3 cut(s)	194, 693, 920
BseMII	CTCAG	2 cut(s)	759, 927
BseNI	ACTGG	2 cut(s)	151, 1438
BseRI	GAGGAG	2 cut(s)	86, 101
BseSI	GKGCMC	2 cut(s)	781, 1141
BseXI	GCAGC	1 cut(s)	616
Bsh1236I	CGCG	2 cut(s)	153, 682
BshFI	GGCC	3 cut(s)	5, 669, 1060
BshNI	GGYRCC	2 cut(s)	646, 1138
BsiHKAI	GWGCWC	3 cut(s)	61, 370, 781
BsiHKCI	CYCGRG	1 cut(s)	68
BsiSI	CCGG	1 cut(s)	1303
BslFI	GGGAC	1 cut(s)	472
BsmFI	GGGAC	1 cut(s)	472
BsmI	GAATGC	2 cut(s)	925, 1052
BsnI	GGCC	3 cut(s)	5, 669, 1060
BsoBI	CYCGRG	1 cut(s)	68
Bsp1286I	GDGCHC	5 cut(s)	61, 370, 622, 781, 1141
Bsp1407I	TGTACA	1 cut(s)	1402
Bsp143I	GATC	9 cut(s)	42, 64, 421, 640, 722, 833, 887, 997, 1171
BspANI	GGCC	3 cut(s)	5, 669, 1060
BspCNI	CTCAG	2 cut(s)	758, 928
BspFNI	CGCG	2 cut(s)	153, 682
BspLI	GGNNCC	3 cut(s)	621, 648, 1140
BspPI	GGATC	5 cut(s)	416, 730, 841, 895, 992
BspQI	GCTCTTC	1 cut(s)	1544
BspT107I	GGYRCC	2 cut(s)	646, 1138
BsrBI	CCGCTC	1 cut(s)	34
BsrDI	GCAATG	3 cut(s)	194, 693, 920
BsrGI	TGTACA	1 cut(s)	1402
BsrI	ACTGG	2 cut(s)	151, 1438
BssECI	CCNNGG	3 cut(s)	520, 623, 1481
BssMI	GATC	9 cut(s)	42, 64, 421, 640, 722, 833, 887, 997, 1171
BssNI	GRCGYC	2 cut(s)	129, 547
BssSI	CACGAG	1 cut(s)	705
Bst2BI	CACGAG	1 cut(s)	705
Bst2UI	CCWGG	1 cut(s)	1482
Bst4CI	ACNGT	4 cut(s)	1291, 1324, 1498, 1508
Bst6I	CTCTTC	2 cut(s)	121, 1544
BstACI	GRCGYC	2 cut(s)	129, 547
BstAUI	TGTACA	1 cut(s)	1402
BstBAI	YACGTR	2 cut(s)	204, 1037
BstC8I	GCNNGC	2 cut(s)	684, 699
BstDEI	CTNAG	4 cut(s)	326, 542, 745, 936
BstDSI	CCRYGG	2 cut(s)	520, 623
BstEII	GGTNACC	1 cut(s)	514
BstF5I	GGATG	6 cut(s)	243, 256, 502, 736, 983, 1156
BstFNI	CGCG	2 cut(s)	153, 682
BstH2I	RGCGCY	1 cut(s)	575
BstHHI	GCGC	1 cut(s)	574
BstKTI	GATC	9 cut(s)	45, 67, 424, 643, 725, 836, 890, 1000, 1174
BstMBI	GATC	9 cut(s)	42, 64, 421, 640, 722, 833, 887, 997, 1171
BstMWI	GCNNNNNNNGC	5 cut(s)	128, 137, 140, 626, 688
BstNI	CCWGG	1 cut(s)	1482
BstNSI	RCATGY	1 cut(s)	1081
BstPI	GGTNACC	1 cut(s)	514
BstSCI	CCNGG	1 cut(s)	1480
BstSFI	CTRYAG	1 cut(s)	38
BstSLI	GKGCMC	2 cut(s)	781, 1141
BstSNI	TACGTA	2 cut(s)	204, 1037
BstUI	CGCG	2 cut(s)	153, 682
BstV1I	GCAGC	1 cut(s)	616
BstV2I	GAAGAC	1 cut(s)	228
BstX2I	RGATCY	5 cut(s)	421, 640, 722, 833, 997
BstXI	CCANNNNNNTGG	1 cut(s)	1008
BstYI	RGATCY	5 cut(s)	421, 640, 722, 833, 997
BsuRI	GGCC	3 cut(s)	5, 669, 1060
BtgI	CCRYGG	2 cut(s)	520, 623
BtgZI	GCGATG	1 cut(s)	1174
BtsCI	GGATG	6 cut(s)	243, 256, 502, 736, 983, 1156
BtsI	GCAGTG	2 cut(s)	859, 1464
BtsIMutI	CAGTG	4 cut(s)	144, 503, 859, 1464
Cac8I	GCNNGC	2 cut(s)	684, 699
CfoI	GCGC	1 cut(s)	574
Cfr13I	GGNCC	2 cut(s)	1059, 1367
CseI	GACGC	3 cut(s)	137, 320, 555
Csp6I	GTAC	2 cut(s)	608, 1403
CviAII	CATG	4 cut(s)	157, 1078, 1406, 1491
CviQI	GTAC	2 cut(s)	608, 1403
DdeI	CTNAG	4 cut(s)	326, 542, 745, 936
DpnI	GATC	9 cut(s)	44, 66, 423, 642, 724, 835, 889, 999, 1173
DpnII	GATC	9 cut(s)	42, 64, 421, 640, 722, 833, 887, 997, 1171
EaeI	YGGCCR	1 cut(s)	3
Eam1104I	CTCTTC	2 cut(s)	121, 1544
EarI	CTCTTC	2 cut(s)	121, 1544
EciI	GGCGGA	2 cut(s)	109, 1351
Eco105I	TACGTA	2 cut(s)	204, 1037
Eco24I	GRGCYC	1 cut(s)	622
Eco47I	GGWCC	1 cut(s)	1367
Eco57I	CTGAAG	1 cut(s)	1268
Eco88I	CYCGRG	1 cut(s)	68
Eco91I	GGTNACC	1 cut(s)	514
EcoO65I	GGTNACC	1 cut(s)	514
EcoRI	GAATTC	2 cut(s)	801, 872
EcoRII	CCWGG	1 cut(s)	1480
EcoT22I	ATGCAT	1 cut(s)	1492
EcoT38I	GRGCYC	1 cut(s)	622
FaeI	CATG	4 cut(s)	160, 1081, 1409, 1494
FaqI	GGGAC	1 cut(s)	472
FatI	CATG	4 cut(s)	156, 1077, 1405, 1490
FauI	CCCGC	1 cut(s)	687
Fnu4HI	GCNGC	7 cut(s)	35, 132, 135, 138, 141, 154, 630
FokI	GGATG	6 cut(s)	250, 263, 509, 743, 970, 1163
FriOI	GRGCYC	1 cut(s)	622
Fsp4HI	GCNGC	7 cut(s)	35, 132, 135, 138, 141, 154, 630
FspBI	CTAG	2 cut(s)	1194, 1349
GlaI	GCGC	1 cut(s)	573
GluI	GCNGC	7 cut(s)	35, 132, 135, 138, 141, 154, 630
GsuI	CTGGAG	1 cut(s)	98
HaeII	RGCGCY	1 cut(s)	575
HaeIII	GGCC	3 cut(s)	5, 669, 1060
HapII	CCGG	1 cut(s)	1303
HgaI	GACGC	3 cut(s)	137, 320, 555
HhaI	GCGC	1 cut(s)	574
Hin1I	GRCGYC	2 cut(s)	129, 547
Hin1II	CATG	4 cut(s)	160, 1081, 1409, 1494
Hin6I	GCGC	1 cut(s)	572
HinP1I	GCGC	1 cut(s)	572
HincII	GTYRAC	2 cut(s)	527, 846
HindII	GTYRAC	2 cut(s)	527, 846
HindIII	AAGCTT	1 cut(s)	766
HpaII	CCGG	1 cut(s)	1303
HphI	GGTGA	3 cut(s)	797, 872, 1171
Hpy166II	GTNNAC	8 cut(s)	415, 527, 736, 779, 846, 1199, 1387, 1403
Hpy188III	TCNNGA	3 cut(s)	68, 287, 1268
Hpy8I	GTNNAC	8 cut(s)	415, 527, 736, 779, 846, 1199, 1387, 1403
Hpy99I	CGWCG	4 cut(s)	113, 128, 131, 1269
HpyAV	CCTTC	6 cut(s)	29, 184, 284, 329, 560, 702
HpyCH4III	ACNGT	4 cut(s)	1291, 1324, 1498, 1508
HpyCH4IV	ACGT	4 cut(s)	203, 510, 1036, 1264
HpyF10VI	GCNNNNNNNGC	5 cut(s)	128, 137, 140, 626, 688
HpyF3I	CTNAG	4 cut(s)	326, 542, 745, 936
HpySE526I	ACGT	4 cut(s)	203, 510, 1036, 1264
Hsp92I	GRCGYC	2 cut(s)	129, 547
Hsp92II	CATG	4 cut(s)	160, 1081, 1409, 1494
HspAI	GCGC	1 cut(s)	572
Kzo9I	GATC	9 cut(s)	42, 64, 421, 640, 722, 833, 887, 997, 1171
LguI	GCTCTTC	1 cut(s)	1544
LmnI	GCTCC	6 cut(s)	73, 391, 569, 625, 957, 1228
Lsp1109I	GCAGC	1 cut(s)	616
LweI	GCATC	2 cut(s)	373, 966
MaeI	CTAG	2 cut(s)	1194, 1349
MaeII	ACGT	4 cut(s)	203, 510, 1036, 1264
MaeIII	GTNAC	3 cut(s)	514, 1260, 1498
MalI	GATC	9 cut(s)	44, 66, 423, 642, 724, 835, 889, 999, 1173
MbiI	CCGCTC	1 cut(s)	34
MboI	GATC	9 cut(s)	42, 64, 421, 640, 722, 833, 887, 997, 1171
MboII	GAAGA	8 cut(s)	108, 233, 271, 611, 614, 1174, 1289, 1531
MfeI	CAATTG	1 cut(s)	816
MflI	RGATCY	5 cut(s)	421, 640, 722, 833, 997
MhlI	GDGCHC	5 cut(s)	61, 370, 622, 781, 1141
MlyI	GAGTC	6 cut(s)	107, 737, 896, 1016, 1079, 1411
MmeI	TCCRAC	2 cut(s)	533, 989
Mph1103I	ATGCAT	1 cut(s)	1492
MroXI	GAANNNNTTC	1 cut(s)	18
MseI	TTAA	2 cut(s)	1145, 1293
MslI	CAYNNNNRTG	1 cut(s)	401
MspA1I	CMGCKG	1 cut(s)	1473
MspI	CCGG	1 cut(s)	1303
MspR9I	CCNGG	1 cut(s)	1482
MunI	CAATTG	1 cut(s)	816
Mva1269I	GAATGC	2 cut(s)	925, 1052
MvaI	CCWGG	1 cut(s)	1482
MvnI	CGCG	2 cut(s)	153, 682
MwoI	GCNNNNNNNGC	5 cut(s)	128, 137, 140, 626, 688
NdeII	GATC	9 cut(s)	42, 64, 421, 640, 722, 833, 887, 997, 1171
NlaIII	CATG	4 cut(s)	160, 1081, 1409, 1494
NlaIV	GGNNCC	3 cut(s)	621, 648, 1140
NsiI	ATGCAT	1 cut(s)	1492
NspI	RCATGY	1 cut(s)	1081
PaeR7I	CTCGAG	1 cut(s)	68
PciSI	GCTCTTC	1 cut(s)	1544
PcsI	WCGNNNNNNNCGW	2 cut(s)	90, 105
PctI	GAATGC	2 cut(s)	925, 1052
PdmI	GAANNNNTTC	1 cut(s)	18
PfeI	GAWTC	8 cut(s)	52, 406, 472, 821, 908, 917, 1214, 1585
PkrI	GCNGC	7 cut(s)	36, 133, 136, 139, 142, 155, 631
PleI	GAGTC	6 cut(s)	107, 737, 896, 1016, 1079, 1411
PpsI	GAGTC	6 cut(s)	107, 737, 896, 1016, 1079, 1411
Ppu21I	YACGTR	2 cut(s)	204, 1037
PshBI	ATTAAT	1 cut(s)	1145
Psp6I	CCWGG	1 cut(s)	1480
PspEI	GGTNACC	1 cut(s)	514
PspGI	CCWGG	1 cut(s)	1480
PspN4I	GGNNCC	3 cut(s)	621, 648, 1140
PspPI	GGNCC	2 cut(s)	1059, 1367
PsuI	RGATCY	5 cut(s)	421, 640, 722, 833, 997
PvuII	CAGCTG	1 cut(s)	1473
RsaI	GTAC	2 cut(s)	609, 1404
RsaNI	GTAC	2 cut(s)	608, 1403
RseI	CAYNNNNRTG	1 cut(s)	401
SapI	GCTCTTC	1 cut(s)	1544
SaqAI	TTAA	2 cut(s)	1145, 1293
SatI	GCNGC	7 cut(s)	35, 132, 135, 138, 141, 154, 630
Sau3AI	GATC	9 cut(s)	42, 64, 421, 640, 722, 833, 887, 997, 1171
Sau96I	GGNCC	2 cut(s)	1059, 1367
SchI	GAGTC	6 cut(s)	107, 737, 896, 1016, 1079, 1411
ScrFI	CCNGG	1 cut(s)	1482
SduI	GDGCHC	5 cut(s)	61, 370, 622, 781, 1141
SfaNI	GCATC	2 cut(s)	373, 966
SfcI	CTRYAG	1 cut(s)	38
Sfr274I	CTCGAG	1 cut(s)	68
SinI	GGWCC	1 cut(s)	1367
SlaI	CTCGAG	1 cut(s)	68
SmiMI	CAYNNNNRTG	1 cut(s)	401
SmlI	CTYRAG	3 cut(s)	68, 882, 1101
SmoI	CTYRAG	3 cut(s)	68, 882, 1101
SnaBI	TACGTA	2 cut(s)	204, 1037
SspI	AATATT	1 cut(s)	454
SspMI	CTAG	2 cut(s)	1194, 1349
StyD4I	CCNGG	1 cut(s)	1480
TaaI	ACNGT	4 cut(s)	1291, 1324, 1498, 1508
TaiI	ACGT	4 cut(s)	206, 513, 1039, 1267
TaqI	TCGA	9 cut(s)	45, 55, 63, 69, 84, 93, 288, 661, 1358
TatI	WGTACW	1 cut(s)	1402
TauI	GCSGC	6 cut(s)	37, 134, 137, 140, 143, 156
TfiI	GAWTC	8 cut(s)	52, 406, 472, 821, 908, 917, 1214, 1585
Tru1I	TTAA	2 cut(s)	1145, 1293
Tru9I	TTAA	2 cut(s)	1145, 1293
TscAI	CASTG	4 cut(s)	151, 510, 859, 1464
TseI	GCWGC	1 cut(s)	629
TspDTI	ATGAA	5 cut(s)	180, 183, 777, 909, 1242
TspRI	CASTG	4 cut(s)	151, 510, 859, 1464
VneI	GTGCAC	1 cut(s)	777
VpaK11BI	GGWCC	1 cut(s)	1367
VspI	ATTAAT	1 cut(s)	1145
XapI	RAATTY	5 cut(s)	712, 754, 801, 872, 1558
XceI	RCATGY	1 cut(s)	1081
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1053
XhoI	CTCGAG	1 cut(s)	68
XmnI	GAANNNNTTC	1 cut(s)	18
XspI	CTAG	2 cut(s)	1194, 1349
Zsp2I	ATGCAT	1 cut(s)	1492

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.