Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0008459

Physical Location & Seq

Genomic Coordinates Forward (+)

4341625 .. 4345902

Gene Structure 4278 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00161620.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1569 bp

ATGGCCGACCACGAAAGCCTTCTGGCGAGAGAGCGGCTACAAATCGAGCAGATTCGAGCACTCGATCTCGAGGAGCTGGAGGTCGAGGAGGTCGATGACGACTACAACGACGACTCTTCCGCCGACGACGCCGCCGCCACTGGTCGCGGCATGGCTGATGAATATACCTTCAATACTTGTTTGGCTTCATTGCATACGTATCTTGGCGAGGTTGAAGACACTCATCATAGGATGGCGTTTTTGGATGGCGGTGCGGTATTGAACCTCCCAATCTTCTATCTCGAAGGAGTTGTCCTGTTCCCAGACGCTACCCTTCCACTAAGAGTTATTCAACCCAATTTTGTAGTTGCTATTGAGAGAGCACTATCCCAAGTTGACGCTCCTTATACCATTGGTGTGATTCGTGTTTACAGAGATCCCAACAATAGAAGCATAAAGTTTGCAAATATTGGGACAACTGCAGAGATTCGCCAATATAGGAGATTAGAGGATGGCTCACTGAACGTGGTAACCCGTGGTCAACAGCGATTTCGTCTGAGACGCCGTTGGATTGATGTGGAAGGAGCGCCATACGGGGAAATCCAAATTATAGAAGAAGATGTACCGTTGAGGGCTCCACGGGCTGCATTTGGAGATCTGGCACCATTTAGTAATCGAAAAGGCCATAGTTTCCAGCGTGCAATGCCTTCGCACGCTTCTCGTGGAAATTCAAATGGATGTATGGATGTGGACAATGACTCAGAGGCAAATTCAGATGAAAGCTTTGAGAGTGCACTTTCTTTGACAGAAAAGGGAATTCACCAATCTGCAATTGAATCCTATTATGGATCTGATGTAATGTCAACAAGCAGTGATGGTGAGAAGTCAGAATTCTTATCTCAAGGATCACAATCAAAAGACTCTGATTCCACAGATTCATTGCATTCGTGCCCTGAGAGTTTGGTTGATTTGGGGAGCAGTTCCATATCAGAGATGCAATCATCCAAACAGAAAGATCCAAGTAGTTGGAGAAATACAGACTTTAAACAGATACGTAGAGTTCCAAGAGCATTCTGGCCCTATTGGGTATATCGCATGTATGACTCCTATTGTCTTGCTCAAGGAGTGGCAGATATGTGGAAACAGATAGTTGGGGCACCATTAATGGATGGTCTGGTGAAGAAGCCTGATCTTTTGTCATTTTACATTGCTAGTAAACTTCCTGTTTCTGAATCTACAAGGCAGGAGCTTTTGGAGATTGATGGTATTTCATATAGGTTACGTCGGGAAATTGAGTTGCTTCAGACTGTTAATCTTCTCCGGTGTAAAACTTGTCAGACTGTTTTTGCAAGGCGGAGTGATATGCTAGTGATGTCAAGTGATGGTCCTCTTGGTGCTTATGTAAACCCCTCTGGTTGGGTACACGAGATAATGACTCTCTACAAAGCAACTGGCTTGGCACTCGTAGGTTCAGCAGTGAAAGAATACAGCTGGTTTCCTGGGTATGCATGGACAGTAACAAACTGTGCCACCTGTGAAACTCAAATGGGTTGGCTCTTCACAGCCACAAAAAAAGAATTTGAAGCCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0002009 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006464 GO:0006508 GO:0006511 GO:0006807 GO:0007275 GO:0007423 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009653 GO:0009790 GO:0009887 GO:0009888 GO:0009987 GO:0010498 GO:0016567 GO:0019538 GO:0019941 GO:0030163 GO:0031461 GO:0031464 GO:0032446 GO:0032501 GO:0032502 GO:0032991 GO:0033333 GO:0033334 GO:0033339 GO:0035107 GO:0035113 GO:0035118 GO:0035138 GO:0035239 GO:0035295 GO:0036211 GO:0042471 GO:0042472 GO:0043161 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043583 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044424 GO:0044464 GO:0048513 GO:0048562 GO:0048568 GO:0048598 GO:0048729 GO:0048731 GO:0048736 GO:0048839 GO:0048856 GO:0051603 GO:0060173 GO:0060429 GO:0060562 GO:0070647 GO:0071599 GO:0071600 GO:0071704 GO:0080008 GO:0090596 GO:1901564 GO:1901565 GO:1901575 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LON_substr_bdg Yippee-Mis18

Protein Analysis

522

Amino Acids

58.6

Weight (kDa)

4.9

Isoelectric Point (pI)

52.64

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LON_substr_bdg	PF02190	88 - 209	1.9e-22	ATP-dependent protease La (LON) substrate-binding domain
Yippee-Mis18	PF03226	433 - 520	2.3e-06	Yippee zinc-binding/DNA-binding /Mis18, centromere assembly

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008459)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G25740 AT2G25740
fragaria_vesca	FvH4_2g35320 FvH4_2g35320 FvH4_2g35320 FvH4_2g35320
malus_domestica	MD08G1111400.v1.1 MD15G1090900.v1.1
prunus_persica	Prupe.1G445300_v2.0.a1 Prupe.1G445300_v2.0.a1
pyrus_communis	pycom08g09250 pycom15g08480 pycom15g08490
rosa_chinensis	RchiOBHm_Chr6g0306601
rosa_laevigata	RLG00000010781
rosa_multiflora	Rmu_sc0017624.1_g000002
rosa_roxburghii	Rroxscaffold_7G00161620
rosa_rugosa	Rorug06G0350900
rosa_samantha	Rh6AG463200 Rh6BG437700 Rh6CG477500 Rh6DG464000
rosa_wichuraiana	Rw6G040360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	640, 1135
AccBSI	CCGCTC	1 cut(s)	34
AccII	CGCG	1 cut(s)	147
AciI	CCGC	8 cut(s)	34, 120, 132, 135, 147, 249, 254, 1333
AclWI	GGATC	4 cut(s)	410, 835, 892, 989
AcoI	YGGCCR	1 cut(s)	3
AcsI	RAATTY	5 cut(s)	706, 748, 795, 869, 1556
AcuI	CTGAAG	1 cut(s)	1265
AcyI	GRCGYC	2 cut(s)	129, 541
AfaI	GTAC	2 cut(s)	603, 1401
AfiI	CCNNNNNNNGG	1 cut(s)	1395
AgsI	TTSAA	7 cut(s)	172, 215, 262, 332, 711, 815, 1562
AjnI	CCWGG	1 cut(s)	1477
AluBI	AGCT	4 cut(s)	76, 762, 1228, 1470
AluI	AGCT	4 cut(s)	76, 762, 1228, 1470
Alw21I	GWGCWC	3 cut(s)	61, 364, 775
Alw26I	GTCTC	1 cut(s)	532
Alw44I	GTGCAC	1 cut(s)	771
AlwI	GGATC	4 cut(s)	410, 835, 892, 989
Ama87I	CYCGRG	1 cut(s)	68
AoxI	GGCC	3 cut(s)	3, 661, 1055
ApaLI	GTGCAC	1 cut(s)	771
ApeKI	GCWGC	1 cut(s)	623
ApoI	RAATTY	5 cut(s)	706, 748, 795, 869, 1556
ArsI	GACNNNNNNTTYG	2 cut(s)	276, 308
AseI	ATTAAT	1 cut(s)	1142
Asp700I	GAANNNNTTC	1 cut(s)	18
AspLEI	GCGC	1 cut(s)	568
AspS9I	GGNCC	2 cut(s)	1056, 1364
AsuHPI	GGTGA	3 cut(s)	791, 869, 1168
AvaI	CYCGRG	1 cut(s)	68
AvaII	GGWCC	1 cut(s)	1364
BaeGI	GKGCMC	3 cut(s)	775, 932, 1138
BanI	GGYRCC	2 cut(s)	640, 1135
BanII	GRGCYC	1 cut(s)	616
BarI	GAAGNNNNNNTAC	2 cut(s)	585, 617
BauI	CACGAG	2 cut(s)	699, 1403
BbsI	GAAGAC	1 cut(s)	222
Bbv12I	GWGCWC	3 cut(s)	61, 364, 775
BbvI	GCAGC	1 cut(s)	610
BccI	CCATC	7 cut(s)	226, 239, 485, 848, 1142, 1235, 1355
BceAI	ACGGC	1 cut(s)	528
BcgI	CGANNNNNNTGC	4 cut(s)	669, 680, 703, 714
BciT130I	CCWGG	1 cut(s)	1479
BcoDI	GTCTC	1 cut(s)	532
BfaI	CTAG	2 cut(s)	1191, 1346
BfmI	CTRYAG	1 cut(s)	459
BfoI	RGCGCY	1 cut(s)	569
BglII	AGATCT	1 cut(s)	634
BisI	GCNGC	5 cut(s)	35, 132, 135, 148, 624
BlsI	GCNGC	5 cut(s)	36, 133, 136, 149, 625
Bme1390I	CCNGG	1 cut(s)	1479
Bme18I	GGWCC	1 cut(s)	1364
BmeT110I	CYCGRG	1 cut(s)	68
BmgT120I	GGNCC	2 cut(s)	1056, 1364
BmiI	GGNNCC	3 cut(s)	615, 642, 1137
BmrFI	CCNGG	1 cut(s)	1479
BmsI	GCATC	1 cut(s)	963
BpiI	GAAGAC	1 cut(s)	222
BplI	GAGNNNNNCTC	2 cut(s)	479, 511
BpmI	CTGGAG	1 cut(s)	98
BpuEI	CTTGAG	2 cut(s)	864, 1083
BsaAI	YACGTR	2 cut(s)	198, 1034
BsaBI	GATNNNNATC	1 cut(s)	889
BsaHI	GRCGYC	2 cut(s)	129, 541
BsaJI	CCNNGG	3 cut(s)	514, 617, 1478
BsaWI	WCCGGW	1 cut(s)	1299
Bsc4I	CCNNNNNNNGG	1 cut(s)	1395
Bse1I	ACTGG	2 cut(s)	145, 1435
Bse3DI	GCAATG	4 cut(s)	188, 687, 917, 1185
Bse8I	GATNNNNATC	1 cut(s)	889
BseBI	CCWGG	1 cut(s)	1479
BseDI	CCNNGG	3 cut(s)	514, 617, 1478
BseGI	GGATG	7 cut(s)	237, 250, 496, 722, 730, 980, 1153
BseJI	GATNNNNATC	1 cut(s)	889
BseLI	CCNNNNNNNGG	1 cut(s)	1395
BseMI	GCAATG	4 cut(s)	188, 687, 917, 1185
BseMII	CTCAG	3 cut(s)	527, 753, 924
BseNI	ACTGG	2 cut(s)	145, 1435
BseRI	GAGGAG	2 cut(s)	86, 101
BseSI	GKGCMC	3 cut(s)	775, 932, 1138
BseXI	GCAGC	1 cut(s)	610
Bsh1236I	CGCG	1 cut(s)	147
BshFI	GGCC	3 cut(s)	5, 663, 1057
BshNI	GGYRCC	2 cut(s)	640, 1135
BsiHKAI	GWGCWC	3 cut(s)	61, 364, 775
BsiHKCI	CYCGRG	1 cut(s)	68
BsiSI	CCGG	1 cut(s)	1300
BslFI	GGGAC	1 cut(s)	466
BslI	CCNNNNNNNGG	1 cut(s)	1395
BsmAI	GTCTC	1 cut(s)	532
BsmBI	CGTCTC	1 cut(s)	532
BsmFI	GGGAC	1 cut(s)	466
BsmI	GAATGC	2 cut(s)	922, 1049
BsnI	GGCC	3 cut(s)	5, 663, 1057
BsoBI	CYCGRG	1 cut(s)	68
Bsp1286I	GDGCHC	6 cut(s)	61, 364, 616, 775, 932, 1138
Bsp143I	GATC	7 cut(s)	64, 415, 634, 827, 884, 994, 1168
BspACI	CCGC	8 cut(s)	34, 120, 132, 135, 147, 249, 254, 1333
BspANI	GGCC	3 cut(s)	5, 663, 1057
BspCNI	CTCAG	3 cut(s)	528, 752, 925
BspFNI	CGCG	1 cut(s)	147
BspLI	GGNNCC	3 cut(s)	615, 642, 1137
BspMAI	CTGCAG	1 cut(s)	463
BspPI	GGATC	4 cut(s)	410, 835, 892, 989
BspQI	GCTCTTC	1 cut(s)	1541
BspT107I	GGYRCC	2 cut(s)	640, 1135
BsrBI	CCGCTC	1 cut(s)	34
BsrDI	GCAATG	4 cut(s)	188, 687, 917, 1185
BsrI	ACTGG	2 cut(s)	145, 1435
BssECI	CCNNGG	3 cut(s)	514, 617, 1478
BssMI	GATC	7 cut(s)	64, 415, 634, 827, 884, 994, 1168
BssNI	GRCGYC	2 cut(s)	129, 541
BssSI	CACGAG	2 cut(s)	699, 1403
Bst2BI	CACGAG	2 cut(s)	699, 1403
Bst2UI	CCWGG	1 cut(s)	1479
Bst4CI	ACNGT	5 cut(s)	606, 1288, 1321, 1495, 1505
Bst6I	CTCTTC	2 cut(s)	121, 1541
BstACI	GRCGYC	2 cut(s)	129, 541
BstBAI	YACGTR	2 cut(s)	198, 1034
BstC8I	GCNNGC	2 cut(s)	678, 693
BstDEI	CTNAG	4 cut(s)	320, 536, 739, 933
BstDSI	CCRYGG	2 cut(s)	514, 617
BstEII	GGTNACC	1 cut(s)	508
BstF5I	GGATG	7 cut(s)	237, 250, 496, 722, 730, 980, 1153
BstFNI	CGCG	1 cut(s)	147
BstH2I	RGCGCY	1 cut(s)	569
BstHHI	GCGC	1 cut(s)	568
BstKTI	GATC	7 cut(s)	67, 418, 637, 830, 887, 997, 1171
BstMAI	GTCTC	1 cut(s)	532
BstMBI	GATC	7 cut(s)	64, 415, 634, 827, 884, 994, 1168
BstMWI	GCNNNNNNNGC	3 cut(s)	128, 620, 682
BstNI	CCWGG	1 cut(s)	1479
BstNSI	RCATGY	1 cut(s)	1078
BstPI	GGTNACC	1 cut(s)	508
BstSCI	CCNGG	1 cut(s)	1477
BstSFI	CTRYAG	1 cut(s)	459
BstSLI	GKGCMC	3 cut(s)	775, 932, 1138
BstSNI	TACGTA	2 cut(s)	198, 1034
BstUI	CGCG	1 cut(s)	147
BstV1I	GCAGC	1 cut(s)	610
BstV2I	GAAGAC	1 cut(s)	222
BstX2I	RGATCY	4 cut(s)	415, 634, 827, 994
BstXI	CCANNNNNNTGG	1 cut(s)	1005
BstYI	RGATCY	4 cut(s)	415, 634, 827, 994
BsuRI	GGCC	3 cut(s)	5, 663, 1057
BtgI	CCRYGG	2 cut(s)	514, 617
BtsCI	GGATG	7 cut(s)	237, 250, 496, 722, 730, 980, 1153
BtsI	GCAGTG	2 cut(s)	856, 1461
BtsIMutI	CAGTG	4 cut(s)	138, 497, 856, 1461
Cac8I	GCNNGC	2 cut(s)	678, 693
CfoI	GCGC	1 cut(s)	568
Cfr13I	GGNCC	2 cut(s)	1056, 1364
CseI	GACGC	4 cut(s)	137, 314, 386, 549
Csp6I	GTAC	2 cut(s)	602, 1400
CviAII	CATG	3 cut(s)	151, 1075, 1488
CviQI	GTAC	2 cut(s)	602, 1400
DdeI	CTNAG	4 cut(s)	320, 536, 739, 933
DpnI	GATC	7 cut(s)	66, 417, 636, 829, 886, 996, 1170
DpnII	GATC	7 cut(s)	64, 415, 634, 827, 884, 994, 1168
DraI	TTTAAA	1 cut(s)	1024
EaeI	YGGCCR	1 cut(s)	3
Eam1104I	CTCTTC	2 cut(s)	121, 1541
EarI	CTCTTC	2 cut(s)	121, 1541
EciI	GGCGGA	2 cut(s)	109, 1348
Eco105I	TACGTA	2 cut(s)	198, 1034
Eco24I	GRGCYC	1 cut(s)	616
Eco47I	GGWCC	1 cut(s)	1364
Eco57I	CTGAAG	1 cut(s)	1265
Eco88I	CYCGRG	1 cut(s)	68
Eco91I	GGTNACC	1 cut(s)	508
EcoO65I	GGTNACC	1 cut(s)	508
EcoRI	GAATTC	2 cut(s)	795, 869
EcoRII	CCWGG	1 cut(s)	1477
EcoT22I	ATGCAT	1 cut(s)	1489
EcoT38I	GRGCYC	1 cut(s)	616
Esp3I	CGTCTC	1 cut(s)	532
FaeI	CATG	3 cut(s)	154, 1078, 1491
FaqI	GGGAC	1 cut(s)	466
FatI	CATG	3 cut(s)	150, 1074, 1487
Fnu4HI	GCNGC	5 cut(s)	35, 132, 135, 148, 624
FokI	GGATG	7 cut(s)	244, 257, 503, 729, 737, 967, 1160
FriOI	GRGCYC	1 cut(s)	616
Fsp4HI	GCNGC	5 cut(s)	35, 132, 135, 148, 624
FspBI	CTAG	2 cut(s)	1191, 1346
GlaI	GCGC	1 cut(s)	567
GluI	GCNGC	5 cut(s)	35, 132, 135, 148, 624
GsuI	CTGGAG	1 cut(s)	98
HaeII	RGCGCY	1 cut(s)	569
HaeIII	GGCC	3 cut(s)	5, 663, 1057
HapII	CCGG	1 cut(s)	1300
HgaI	GACGC	4 cut(s)	137, 314, 386, 549
HhaI	GCGC	1 cut(s)	568
Hin1I	GRCGYC	2 cut(s)	129, 541
Hin1II	CATG	3 cut(s)	154, 1078, 1491
Hin6I	GCGC	1 cut(s)	566
HinP1I	GCGC	1 cut(s)	566
HincII	GTYRAC	3 cut(s)	376, 521, 843
HindII	GTYRAC	3 cut(s)	376, 521, 843
HindIII	AAGCTT	1 cut(s)	760
HpaII	CCGG	1 cut(s)	1300
HphI	GGTGA	3 cut(s)	791, 869, 1168
Hpy166II	GTNNAC	9 cut(s)	376, 409, 521, 730, 773, 843, 1196, 1384, 1402
Hpy188III	TCNNGA	3 cut(s)	68, 281, 1265
Hpy8I	GTNNAC	9 cut(s)	376, 409, 521, 730, 773, 843, 1196, 1384, 1402
Hpy99I	CGWCG	4 cut(s)	113, 128, 131, 1266
HpyAV	CCTTC	6 cut(s)	29, 178, 278, 323, 554, 696
HpyCH4III	ACNGT	5 cut(s)	606, 1288, 1321, 1495, 1505
HpyCH4IV	ACGT	4 cut(s)	197, 504, 1033, 1261
HpyF10VI	GCNNNNNNNGC	3 cut(s)	128, 620, 682
HpyF3I	CTNAG	4 cut(s)	320, 536, 739, 933
HpySE526I	ACGT	4 cut(s)	197, 504, 1033, 1261
Hsp92I	GRCGYC	2 cut(s)	129, 541
Hsp92II	CATG	3 cut(s)	154, 1078, 1491
HspAI	GCGC	1 cut(s)	566
Kzo9I	GATC	7 cut(s)	64, 415, 634, 827, 884, 994, 1168
LguI	GCTCTTC	1 cut(s)	1541
LmnI	GCTCC	6 cut(s)	73, 385, 563, 619, 954, 1225
Lsp1109I	GCAGC	1 cut(s)	610
LweI	GCATC	1 cut(s)	963
MaeI	CTAG	2 cut(s)	1191, 1346
MaeII	ACGT	4 cut(s)	197, 504, 1033, 1261
MaeIII	GTNAC	3 cut(s)	508, 1257, 1495
MalI	GATC	7 cut(s)	66, 417, 636, 829, 886, 996, 1170
MbiI	CCGCTC	1 cut(s)	34
MboI	GATC	7 cut(s)	64, 415, 634, 827, 884, 994, 1168
MboII	GAAGA	8 cut(s)	108, 227, 265, 605, 608, 1171, 1286, 1528
MfeI	CAATTG	1 cut(s)	810
MflI	RGATCY	4 cut(s)	415, 634, 827, 994
MhlI	GDGCHC	6 cut(s)	61, 364, 616, 775, 932, 1138
MluCI	AATT	9 cut(s)	337, 585, 706, 748, 795, 810, 869, 1269, 1556
MlyI	GAGTC	5 cut(s)	107, 731, 893, 1076, 1408
MmeI	TCCRAC	2 cut(s)	527, 986
Mph1103I	ATGCAT	1 cut(s)	1489
MroXI	GAANNNNTTC	1 cut(s)	18
MseI	TTAA	3 cut(s)	1023, 1142, 1290
MslI	CAYNNNNRTG	1 cut(s)	395
MspA1I	CMGCKG	1 cut(s)	1470
MspI	CCGG	1 cut(s)	1300
MspR9I	CCNGG	1 cut(s)	1479
MunI	CAATTG	1 cut(s)	810
Mva1269I	GAATGC	2 cut(s)	922, 1049
MvaI	CCWGG	1 cut(s)	1479
MvnI	CGCG	1 cut(s)	147
MwoI	GCNNNNNNNGC	3 cut(s)	128, 620, 682
NdeII	GATC	7 cut(s)	64, 415, 634, 827, 884, 994, 1168
NlaIII	CATG	3 cut(s)	154, 1078, 1491
NlaIV	GGNNCC	3 cut(s)	615, 642, 1137
NsiI	ATGCAT	1 cut(s)	1489
NspI	RCATGY	1 cut(s)	1078
PaeR7I	CTCGAG	1 cut(s)	68
PciSI	GCTCTTC	1 cut(s)	1541
PcsI	WCGNNNNNNNCGW	2 cut(s)	90, 105
PctI	GAATGC	2 cut(s)	922, 1049
PdmI	GAANNNNTTC	1 cut(s)	18
PfeI	GAWTC	7 cut(s)	52, 400, 466, 815, 905, 914, 1211
PkrI	GCNGC	5 cut(s)	36, 133, 136, 149, 625
PleI	GAGTC	5 cut(s)	107, 731, 893, 1076, 1408
PpsI	GAGTC	5 cut(s)	107, 731, 893, 1076, 1408
Ppu21I	YACGTR	2 cut(s)	198, 1034
PshBI	ATTAAT	1 cut(s)	1142
Psp6I	CCWGG	1 cut(s)	1477
PspEI	GGTNACC	1 cut(s)	508
PspGI	CCWGG	1 cut(s)	1477
PspN4I	GGNNCC	3 cut(s)	615, 642, 1137
PspPI	GGNCC	2 cut(s)	1056, 1364
PstI	CTGCAG	1 cut(s)	463
PsuI	RGATCY	4 cut(s)	415, 634, 827, 994
PvuII	CAGCTG	1 cut(s)	1470
RsaI	GTAC	2 cut(s)	603, 1401
RsaNI	GTAC	2 cut(s)	602, 1400
RseI	CAYNNNNRTG	1 cut(s)	395
SapI	GCTCTTC	1 cut(s)	1541
SaqAI	TTAA	3 cut(s)	1023, 1142, 1290
SatI	GCNGC	5 cut(s)	35, 132, 135, 148, 624
Sau3AI	GATC	7 cut(s)	64, 415, 634, 827, 884, 994, 1168
Sau96I	GGNCC	2 cut(s)	1056, 1364
SchI	GAGTC	5 cut(s)	107, 731, 893, 1076, 1408
ScrFI	CCNGG	1 cut(s)	1479
SduI	GDGCHC	6 cut(s)	61, 364, 616, 775, 932, 1138
SfaNI	GCATC	1 cut(s)	963
SfcI	CTRYAG	1 cut(s)	459
Sfr274I	CTCGAG	1 cut(s)	68
SinI	GGWCC	1 cut(s)	1364
SlaI	CTCGAG	1 cut(s)	68
SmiMI	CAYNNNNRTG	1 cut(s)	395
SmlI	CTYRAG	3 cut(s)	68, 879, 1098
SmoI	CTYRAG	3 cut(s)	68, 879, 1098
SnaBI	TACGTA	2 cut(s)	198, 1034
Sse9I	AATT	9 cut(s)	337, 585, 706, 748, 795, 810, 869, 1269, 1556
SsiI	CCGC	8 cut(s)	34, 120, 132, 135, 147, 249, 254, 1333
SspI	AATATT	1 cut(s)	448
SspMI	CTAG	2 cut(s)	1191, 1346
StyD4I	CCNGG	1 cut(s)	1477
TaaI	ACNGT	5 cut(s)	606, 1288, 1321, 1495, 1505
TaiI	ACGT	4 cut(s)	200, 507, 1036, 1264
TaqI	TCGA	8 cut(s)	45, 55, 63, 69, 84, 93, 282, 655
TasI	AATT	9 cut(s)	337, 585, 706, 748, 795, 810, 869, 1269, 1556
TauI	GCSGC	4 cut(s)	37, 134, 137, 150
TfiI	GAWTC	7 cut(s)	52, 400, 466, 815, 905, 914, 1211
Tru1I	TTAA	3 cut(s)	1023, 1142, 1290
Tru9I	TTAA	3 cut(s)	1023, 1142, 1290
TscAI	CASTG	4 cut(s)	145, 504, 856, 1461
TseI	GCWGC	1 cut(s)	623
TspDTI	ATGAA	5 cut(s)	174, 177, 771, 906, 1239
TspRI	CASTG	4 cut(s)	145, 504, 856, 1461
VneI	GTGCAC	1 cut(s)	771
VpaK11BI	GGWCC	1 cut(s)	1364
VspI	ATTAAT	1 cut(s)	1142
XapI	RAATTY	5 cut(s)	706, 748, 795, 869, 1556
XceI	RCATGY	1 cut(s)	1078
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1050
XhoI	CTCGAG	1 cut(s)	68
XmnI	GAANNNNTTC	1 cut(s)	18
XspI	CTAG	2 cut(s)	1191, 1346
Zsp2I	ATGCAT	1 cut(s)	1489

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.