AT2G25800

Plant family of unknown function (DUF810)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
OG0013421
Physical Location & Seq
Reverse (-)
11005775 .. 11009861
4087 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G25800.1

Sequence Viewer

Length: 2964 bp
ATGGCTCATCTCTTCAGGGAGCTGTCTCTGGGCCACTCCAAGAGAGAGTCTACGCCGCCGCCGCCGTCACATTCGGCGACTTCACGTTCTTCTTCAATGTCTTCCGATCTACCTCCATCACCACTCGGACAACTCGCTGTCCAACTTTCCGATTCCGATCTCCGTCTCACTGCTTACGAGATCTTCGTCGCCGCATGTCGTAGCGCCACCGGTAAACCTCTCTCATCGGCTGTTTCAGTCGCTGTTTTGAATCAGGATTCTCCCAATGGCTCTCCTGCTTCGCCGGCGATTCAGCGTTCTCTGACCTCAACCGCCGCTAGTAAAATGAAGAAAGCTTTGGGGTTAAGGTCGTCTTCTTCGCTTTCACCTGGATCTAATAAGAGTTCTGGTTCTGCTTCGGGTTCTAATGGTAAGTCGAAACGTCCTACTACTGTCGGTGAGCTTATGCGGATCCAAATGCGAGTATCGGAGGCTGTCGATTCTCGTGTTCGTAGAGCTTTTCTTAGAATCGCTGCTTCACAGGTTGGAAGGAAGATTGAGTCAGTAGTTCTTCCTTTAGAGTTGTTACAGCAGCTAAAGTCTTCTGATTTTACGGATCAGCAAGAATATGATGCTTGGCTGAAGAGATCATTGAAGGTTCTTGAGGCAGGTCTTTTGTTGCATCCTCGTGTACCTCTTGATAAGACGAATAGTTCTCAACGACTGCGACAGATTATTCATGGTGCTTTAGATCGGCCTTTGGAGACTGGAAGGAATAATGAGCAAATGCAAAGTCTTAGATCAGCGGTCATGTCTCTTGCAACTAGATCTGATGGGTCTTTCTCTGATTCTTGTCACTGGGCTGATGGATCTCCGTTTAATCTCAGGCTTTATGAATTGCTTTTAGAAGCGTGTTTTGATTCTAATGATGCGACGTCCATGGTTGAGGAAGTTGACGACCTAATGGAACATATAAAGAAGACGTGGGTAATTCTTGGAATCAATCAAATGCTGCATAACCTCTGTTTTACGTGGCTTTTGTTTAGTCGTTATGTTGTTACTGGACAAGTTGAGATGGACCTGCTTCATGCTTGTGATTCTCAACTGGCAGAAGTTGCTAAAGATGCAAAGACAACAAAGGATCCTGAATACTCCCAGGTTTTAAGTTCTACACTGAGTGCTATATTAGGATGGGCAGAGAAAAGGCTCCTTGCATACCATGACACTTTTGACCGAGGAAATATTCATACCATGGAGGGAATTGTTTCTTTGGGTGTATCAGCTGCCAGGATATTAGTTGAAGATATATCTAACGAGTACCGTAGAAGAAGGAAAGGAGAAGTTGATGTAGCTCGTACCAGGATTGAGACGTACATCAGGTCCTCACTACGAACTTCTTTTGCGCAGAGAATGGAGAAAGCAGATTCAAGCCGGAGAGCATCTAGGAACCAGAAAAATCCTCTTCCTGTTCTAGCCATCCTTGCTAAGGACATTGGTGAGCTAGCTATTCAGGAAAAGCGGATGTTCAGTCCAATATTGAAGAGATGGCATCCGTTTGCTGCAGGGGTTGCTGTGGCGACCCTTCATGTTTGTTACGGAAATGAGATTAAACAGTTTATAGCCGGAATATCTGAATTGACACCTGATGCTGTCCAGATACTAAGAGCTGCAGATAAGCTAGAAAAGGATCTGGTGCAAATCGCAGTAGAGGATTCTGTTGACAGTGATGATGGTGGCAAAGCAATTATCCGTGAAATGCCTCCCTTCGAAGCTGAGACCGTAATTGCTAATTTGGTCAAAGACTGGATAAAGGCAAGAATAGACAGACTTAAGGAATGGGTTGACAGGAATTTGCAGCAAGAGGTTTGGAAACCCCTGGAGAACCTAGAAGGAGGATATGCACAGTCTGCTGCCGAAGTGTTGCGGATTACTGATGAAACTTTGGAAGCTTTTTTTCAGCTTCCCATACCTATGCATCCTGCTGTATTACCTGATTTAATTATTGGTTTAGACAAATATCTTCAGTATTATGTCTCAAAGGCGAAATCTGGCTGCGGCTCTCGGACTACGTACATGCCTACAATGCCTGCACTCACCAGATGTACAACGGGATCAAAATTCCAATGGAAGAAGAAAGAAAAGACACCTACCACTCAGAAGAGAGAATCTCAGGTTTCGGTTATGAACGGTGAGAATTCTTTTGGGGTCACGCAAATATGTGTCAGAATAAACAGCTTGCACAAAATCCGCAGTGAGCTTGATGTTGTGGAAAAAAGAGTGATCACACATTTGAGGAACTGTGAGTCAGCTCACACCGATGACTTTTCCAACGGCTTAGAAAAAAAGTTTGAGCTCACACCAGCGGCTTGCATAGAAGGCGTTCAACAGCTTTCTGAGTCTCTGGCTTATAAGGTCGTCTTCCACGACCTAAGCCACACGTTATGGGACGGGTTATACATCGGAGACCTCTCTTCCTCTAGAATCGATCCTTTCCTCAAGGAACTCGAACAGAATTTGACAGTCATAGCAGAGACAGTACATGAAAGAGTTCGAACACGCATCATCACCGATATTATGAGAGCCTCTTTAGATGGCTTCTTACTTGTCCTGCTTGCCGGAGGACCCTCTAGGGCGTTCACAAGACAAGACTCTCAGATAATGGAAGAAGATTTCAAATCAATGAAAGATATGTTCTGGGCTAACGGAGACGGTCTAGCCATGGACCTGATCGATAAATTCTCAACCACTGTCAGAGGCGTGCTTCCTCTGTTCAGTACAGATACAGACAGTTTAATAGAGAGGTTCAAGGGAACGACCCTCGAAGCATATGGTTCTTCAGCTAAGTCGAGGCTTCCGTTGCCTCCAACATCAGGCCAGTGGAATGGCATGGAGCCAAACACACTCTTACGTGTTTTGTGTTACCGTAACGACGAATCTGCCACGAGGTTTCTCAAGAAGACATATAATCTACCTAAGAAGCTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF810

Protein Analysis

987

Amino Acids

109.96

Weight (kDa)

8.38

Isoelectric Point (pI)

51.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPR_PATROL1 PF25761 588 - 986 6.1e-169 PATROL1-like, TPR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0013421)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G25800
fragaria_vesca FvH4_2g35590 FvH4_2g35590
malus_domestica MD08G1113600.v1.1 MD15G1093300.v1.1
prunus_persica Prupe.1G448100_v2.0.a1
pyrus_communis pycom08g09420 pycom15g08610
rosa_chinensis RchiOBHm_Chr6g0306221
rosa_laevigata RLG00000010812
rosa_multiflora Rmu_sc0003594.1_g000002
rosa_roxburghii Rroxscaffold_7G00161920
rosa_rugosa Rorug06G0348100
rosa_samantha Rh6AG460700 Rh6BG440700 Rh6CG474700 Rh6DG461000
rosa_wichuraiana Rw6G040130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2388
AatII GACGTC 1 cut(s) 917
Acc16I TGCGCA 1 cut(s) 1383
Acc36I ACCTGC 2 cut(s) 638, 1068
AccI GTMKAC 1 cut(s) 50
AcsI RAATTY 5 cut(s) 1828, 2096, 2173, 2491, 2714
AcuI CTGAAG 3 cut(s) 641, 1985, 2799
AcyI GRCGYC 1 cut(s) 914
AdeI CACNNNGTG 1 cut(s) 1157
AfaI GTAC 8 cut(s) 672, 1298, 1336, 1352, 2051, 2083, 2517, 2755
AfiI CCNNNNNNNGG 2 cut(s) 1465, 2849
AflII CTTAAG 1 cut(s) 1808
AflIII ACRYGT 2 cut(s) 2415, 2887
AgeI ACCGGT 1 cut(s) 209
AgsI TTSAA 9 cut(s) 96, 250, 634, 1280, 1407, 1519, 2363, 2653, 2785
AjiI CACGTC 1 cut(s) 963
AjnI CCWGG 5 cut(s) 367, 1134, 1265, 1337, 1854
AjuI GAANNNNNNNTTGG 2 cut(s) 320, 352
Alw21I GWGCWC 1 cut(s) 2334
AlwNI CAGNNNCTG 1 cut(s) 242
AoxI GGCC 3 cut(s) 31, 734, 2851
ApeKI GCWGC 9 cut(s) 512, 571, 991, 1262, 1538, 1646, 1834, 1889, 2031
ApoI RAATTY 5 cut(s) 1828, 2096, 2173, 2491, 2714
ArsI GACNNNNNNTTYG 2 cut(s) 757, 789
AsiGI ACCGGT 1 cut(s) 209
Asp700I GAANNNNTTC 3 cut(s) 1243, 2358, 2526
AspLEI GCGC 2 cut(s) 206, 1384
AspS9I GGNCC 5 cut(s) 31, 1057, 1359, 2600, 2701
AsuHPI GGTGA 7 cut(s) 111, 357, 449, 1487, 2065, 2180, 2536
AsuII TTCGAA 2 cut(s) 1746, 2530
AsuNHI GCTAGC 1 cut(s) 1480
AvaII GGWCC 4 cut(s) 1057, 1359, 2600, 2701
BamHI GGATCC 2 cut(s) 450, 1120
BanII GRGCYC 1 cut(s) 2334
BauI CACGAG 3 cut(s) 483, 666, 2920
BbsI GAAGAC 6 cut(s) 93, 345, 573, 965, 2389, 2942
Bbv12I GWGCWC 1 cut(s) 2334
BbvI GCAGC 9 cut(s) 499, 583, 978, 1249, 1525, 1633, 1846, 1876, 2018
BccI CCATC 9 cut(s) 124, 806, 839, 1048, 1164, 1463, 1518, 1703, 2564
BceAI ACGGC 2 cut(s) 49, 2326
BcgI CGANNNNNNTGC 2 cut(s) 2897, 2931
BciT130I CCWGG 5 cut(s) 369, 1136, 1267, 1339, 1856
BclI TGATCA 1 cut(s) 2259
BfmI CTRYAG 2 cut(s) 1539, 1647
BfoI RGCGCY 1 cut(s) 207
BfrI CTTAAG 1 cut(s) 1808
BfuAI ACCTGC 2 cut(s) 638, 1068
BglII AGATCT 2 cut(s) 180, 806
Bme1390I CCNGG 5 cut(s) 369, 1136, 1267, 1339, 1856
Bme18I GGWCC 4 cut(s) 1057, 1359, 2600, 2701
BmgBI CACGTC 1 cut(s) 963
BmgT120I GGNCC 5 cut(s) 31, 1057, 1359, 2600, 2701
BmiI GGNNCC 6 cut(s) 452, 1122, 1187, 1427, 2602, 2871
BmrFI CCNGG 5 cut(s) 369, 1136, 1267, 1339, 1856
BmrI ACTGGG 1 cut(s) 847
BmsI GCATC 9 cut(s) 601, 670, 898, 1093, 1427, 1537, 1615, 1963, 2547
BmtI GCTAGC 1 cut(s) 1484
BmuI ACTGGG 1 cut(s) 847
BpiI GAAGAC 6 cut(s) 93, 345, 573, 965, 2389, 2942
BplI GAGNNNNNCTC 2 cut(s) 2131, 2163
BpmI CTGGAG 1 cut(s) 1877
Bpu10I CCTNAGC 2 cut(s) 1464, 2408
Bpu14I TTCGAA 2 cut(s) 1746, 2530
BpuEI CTTGAG 3 cut(s) 662, 2459, 2915
Bsa29I ATCGAT 2 cut(s) 2463, 2709
BsaAI YACGTR 3 cut(s) 1011, 2049, 2888
BsaBI GATNNNNATC 1 cut(s) 156
BsaHI GRCGYC 1 cut(s) 914
BsaI GGTCTC 2 cut(s) 1748, 2436
BsaJI CCNNGG 6 cut(s) 918, 1134, 1213, 1230, 1854, 2697
BsaWI WCCGGW 1 cut(s) 209
Bsc4I CCNNNNNNNGG 2 cut(s) 1465, 2849
Bse118I RCCGGY 2 cut(s) 209, 283
Bse1I ACTGG 6 cut(s) 751, 842, 1045, 1089, 1787, 2854
Bse8I GATNNNNATC 1 cut(s) 156
BseBI CCWGG 5 cut(s) 369, 1136, 1267, 1339, 1856
BseCI ATCGAT 2 cut(s) 2463, 2709
BseDI CCNNGG 6 cut(s) 918, 1134, 1213, 1230, 1854, 2697
BseGI GGATG 6 cut(s) 661, 1175, 1455, 1506, 1528, 1954
BseJI GATNNNNATC 1 cut(s) 156
BseLI CCNNNNNNNGG 2 cut(s) 1465, 2849
BseMII CTCAG 7 cut(s) 877, 1145, 1743, 2147, 2162, 2364, 2645
BseNI ACTGG 6 cut(s) 751, 842, 1045, 1089, 1787, 2854
BseXI GCAGC 9 cut(s) 499, 583, 978, 1249, 1525, 1633, 1846, 1876, 2018
BsgI GTGCAG 1 cut(s) 2052
BshFI GGCC 3 cut(s) 33, 736, 2853
BshTI ACCGGT 1 cut(s) 209
BshVI ATCGAT 2 cut(s) 2463, 2709
BsiHKAI GWGCWC 1 cut(s) 2334
BsiSI CCGG 5 cut(s) 210, 284, 1411, 1602, 2595
BslFI GGGAC 1 cut(s) 2438
BslI CCNNNNNNNGG 2 cut(s) 1465, 2849
BsmBI CGTCTC 3 cut(s) 170, 1340, 2679
BsmFI GGGAC 1 cut(s) 2438
BsnI GGCC 3 cut(s) 33, 736, 2853
Bso31I GGTCTC 2 cut(s) 1748, 2436
Bsp119I TTCGAA 2 cut(s) 1746, 2530
Bsp1286I GDGCHC 1 cut(s) 2334
Bsp1407I TGTACA 1 cut(s) 2081
Bsp19I CCATGG 3 cut(s) 918, 1230, 2697
BspANI GGCC 3 cut(s) 33, 736, 2853
BspCNI CTCAG 7 cut(s) 876, 1146, 1744, 2146, 2161, 2365, 2644
BspDI ATCGAT 2 cut(s) 2463, 2709
BspLI GGNNCC 6 cut(s) 452, 1122, 1187, 1427, 2602, 2871
BspMAI CTGCAG 2 cut(s) 1543, 1651
BspMI ACCTGC 2 cut(s) 638, 1068
BspOI GCTAGC 1 cut(s) 1484
BspT104I TTCGAA 2 cut(s) 1746, 2530
BspTI CTTAAG 1 cut(s) 1808
BspTNI GGTCTC 2 cut(s) 1748, 2436
BsrFI RCCGGY 2 cut(s) 209, 283
BsrGI TGTACA 1 cut(s) 2081
BsrI ACTGG 6 cut(s) 751, 842, 1045, 1089, 1787, 2854
BssAI RCCGGY 2 cut(s) 209, 283
BssECI CCNNGG 6 cut(s) 918, 1134, 1213, 1230, 1854, 2697
BssNI GRCGYC 1 cut(s) 914
BssSI CACGAG 3 cut(s) 483, 666, 2920
BssT1I CCWWGG 3 cut(s) 918, 1230, 2697
Bst2BI CACGAG 3 cut(s) 483, 666, 2920
Bst2UI CCWGG 5 cut(s) 369, 1136, 1267, 1339, 1856
Bst6I CTCTTC 6 cut(s) 17, 617, 1446, 1514, 2132, 2455
BstACI GRCGYC 1 cut(s) 914
BstAFI CTTAAG 1 cut(s) 1808
BstAPI GCANNNNNTGC 3 cut(s) 1094, 1547, 1886
BstAUI TGTACA 1 cut(s) 2081
BstBAI YACGTR 3 cut(s) 1011, 2049, 2888
BstBI TTCGAA 2 cut(s) 1746, 2530
BstC8I GCNNGC 7 cut(s) 285, 1482, 2067, 2216, 2347, 2592, 2738
BstDSI CCRYGG 3 cut(s) 918, 1230, 2697
BstENI CCTNNNNNAGG 1 cut(s) 1463
BstF5I GGATG 6 cut(s) 661, 1175, 1455, 1506, 1528, 1954
BstH2I RGCGCY 1 cut(s) 207
BstHHI GCGC 2 cut(s) 206, 1384
BstNI CCWGG 5 cut(s) 369, 1136, 1267, 1339, 1856
BstNSI RCATGY 2 cut(s) 198, 2056
BstSCI CCNGG 5 cut(s) 367, 1134, 1265, 1337, 1854
BstSFI CTRYAG 2 cut(s) 1539, 1647
BstSNI TACGTA 1 cut(s) 2049
BstV1I GCAGC 9 cut(s) 499, 583, 978, 1249, 1525, 1633, 1846, 1876, 2018
BstV2I GAAGAC 6 cut(s) 93, 345, 573, 965, 2389, 2942
BstX2I RGATCY 7 cut(s) 180, 371, 450, 806, 848, 1120, 1666
BstXI CCANNNNNNTGG 1 cut(s) 2861
BstYI RGATCY 7 cut(s) 180, 371, 450, 806, 848, 1120, 1666
Bsu15I ATCGAT 2 cut(s) 2463, 2709
BsuRI GGCC 3 cut(s) 33, 736, 2853
BsuTUI ATCGAT 2 cut(s) 2463, 2709
BtgI CCRYGG 3 cut(s) 918, 1230, 2697
BtrI CACGTC 1 cut(s) 963
BtsCI GGATG 6 cut(s) 661, 1175, 1455, 1506, 1528, 1954
BtsI GCAGTG 2 cut(s) 168, 2236
BtsIMutI CAGTG 7 cut(s) 168, 835, 1151, 1708, 2236, 2724, 2861
BveI ACCTGC 2 cut(s) 638, 1068
Cac8I GCNNGC 7 cut(s) 285, 1482, 2067, 2216, 2347, 2592, 2738
CaiI CAGNNNCTG 1 cut(s) 242
CfoI GCGC 2 cut(s) 206, 1384
Cfr10I RCCGGY 2 cut(s) 209, 283
Cfr13I GGNCC 5 cut(s) 31, 1057, 1359, 2600, 2701
ClaI ATCGAT 2 cut(s) 2463, 2709
Csp6I GTAC 8 cut(s) 671, 1297, 1335, 1351, 2050, 2082, 2516, 2754
CspAI ACCGGT 1 cut(s) 209
CviQI GTAC 8 cut(s) 671, 1297, 1335, 1351, 2050, 2082, 2516, 2754
DraIII CACNNNGTG 1 cut(s) 1157
Eam1104I CTCTTC 6 cut(s) 17, 617, 1446, 1514, 2132, 2455
EarI CTCTTC 6 cut(s) 17, 617, 1446, 1514, 2132, 2455
Ecl136II GAGCTC 1 cut(s) 2332
Eco105I TACGTA 1 cut(s) 2049
Eco130I CCWWGG 3 cut(s) 918, 1230, 2697
Eco24I GRGCYC 1 cut(s) 2334
Eco31I GGTCTC 2 cut(s) 1748, 2436
Eco47I GGWCC 4 cut(s) 1057, 1359, 2600, 2701
Eco53kI GAGCTC 1 cut(s) 2332
Eco57I CTGAAG 3 cut(s) 641, 1985, 2799
EcoICRI GAGCTC 1 cut(s) 2332
EcoNI CCTNNNNNAGG 1 cut(s) 1463
EcoO109I RGGNCCY 2 cut(s) 1359, 2600
EcoRI GAATTC 1 cut(s) 2173
EcoRII CCWGG 5 cut(s) 367, 1134, 1265, 1337, 1854
EcoT14I CCWWGG 3 cut(s) 918, 1230, 2697
EcoT22I ATGCAT 1 cut(s) 1956
EcoT38I GRGCYC 1 cut(s) 2334
ErhI CCWWGG 3 cut(s) 918, 1230, 2697
Esp3I CGTCTC 3 cut(s) 170, 1340, 2679
FalI AAGNNNNNCTT 4 cut(s) 337, 369, 2381, 2413
FaqI GGGAC 1 cut(s) 2438
FauNDI CATATG 1 cut(s) 2806
FbaI TGATCA 1 cut(s) 2259
FblI GTMKAC 1 cut(s) 50
FokI GGATG 6 cut(s) 648, 1182, 1442, 1513, 1515, 1941
FriOI GRGCYC 1 cut(s) 2334
FspI TGCGCA 1 cut(s) 1383
GlaI GCGC 2 cut(s) 205, 1383
GsuI CTGGAG 1 cut(s) 1877
HaeII RGCGCY 1 cut(s) 207
HaeIII GGCC 3 cut(s) 33, 736, 2853
HapII CCGG 5 cut(s) 210, 284, 1411, 1602, 2595
HhaI GCGC 2 cut(s) 206, 1384
Hin1I GRCGYC 1 cut(s) 914
Hin6I GCGC 2 cut(s) 204, 1382
HinP1I GCGC 2 cut(s) 204, 1382
HincII GTYRAC 3 cut(s) 934, 1699, 1822
HindII GTYRAC 3 cut(s) 934, 1699, 1822
HindIII AAGCTT 3 cut(s) 333, 1926, 2957
HpaII CCGG 5 cut(s) 210, 284, 1411, 1602, 2595
HphI GGTGA 7 cut(s) 111, 357, 449, 1487, 2065, 2180, 2536
Hpy166II GTNNAC 7 cut(s) 51, 215, 671, 934, 1699, 1822, 2616
Hpy188III TCNNGA 8 cut(s) 254, 641, 677, 1124, 1490, 1633, 2457, 2932
Hpy8I GTNNAC 7 cut(s) 51, 215, 671, 934, 1699, 1822, 2616
Hpy99I CGWCG 3 cut(s) 191, 916, 2912
HpyAV CCTTC 8 cut(s) 522, 628, 744, 1302, 1571, 1753, 1862, 2348
HpyCH4IV ACGT 9 cut(s) 85, 421, 914, 962, 1010, 1349, 2048, 2417, 2887
HpySE526I ACGT 9 cut(s) 85, 421, 914, 962, 1010, 1349, 2048, 2417, 2887
Hsp92I GRCGYC 1 cut(s) 914
HspAI GCGC 2 cut(s) 204, 1382
KroI GCCGGC 1 cut(s) 283
KroNI GCCGGC 1 cut(s) 285
Ksp22I TGATCA 1 cut(s) 2259
LmnI GCTCC 3 cut(s) 19, 1191, 2869
Lsp1109I GCAGC 9 cut(s) 499, 583, 978, 1249, 1525, 1633, 1846, 1876, 2018
LweI GCATC 9 cut(s) 601, 670, 898, 1093, 1427, 1537, 1615, 1963, 2547
MaeII ACGT 9 cut(s) 85, 421, 914, 962, 1010, 1349, 2048, 2417, 2887
MaeIII GTNAC 8 cut(s) 66, 564, 833, 1036, 1571, 2185, 2897, 2903
MflI RGATCY 7 cut(s) 180, 371, 450, 806, 848, 1120, 1666
MhlI GDGCHC 1 cut(s) 2334
MlyI GAGTC 5 cut(s) 56, 548, 2291, 2384, 2621
MmeI TCCRAC 4 cut(s) 166, 505, 2331, 2867
Mph1103I ATGCAT 1 cut(s) 1956
MreI CGCCGGCG 1 cut(s) 283
MroNI GCCGGC 1 cut(s) 283
MroXI GAANNNNTTC 3 cut(s) 1243, 2358, 2526
MseI TTAA 7 cut(s) 344, 858, 1142, 1587, 1809, 1976, 2771
MslI CAYNNNNRTG 4 cut(s) 666, 1071, 1949, 2295
MspA1I CMGCKG 3 cut(s) 785, 1262, 2342
MspCI CTTAAG 1 cut(s) 1808
MspI CCGG 5 cut(s) 210, 284, 1411, 1602, 2595
MspR9I CCNGG 5 cut(s) 369, 1136, 1267, 1339, 1856
MvaI CCWGG 5 cut(s) 369, 1136, 1267, 1339, 1856
NaeI GCCGGC 1 cut(s) 285
NcoI CCATGG 3 cut(s) 918, 1230, 2697
NdeI CATATG 1 cut(s) 2806
NgoMIV GCCGGC 1 cut(s) 283
NheI GCTAGC 1 cut(s) 1480
NlaIV GGNNCC 6 cut(s) 452, 1122, 1187, 1427, 2602, 2871
NmuCI GTSAC 3 cut(s) 66, 833, 2185
NsbI TGCGCA 1 cut(s) 1383
NsiI ATGCAT 1 cut(s) 1956
NspI RCATGY 2 cut(s) 198, 2056
NspV TTCGAA 2 cut(s) 1746, 2530
PcsI WCGNNNNNNNCGW 3 cut(s) 183, 2400, 2831
PdiI GCCGGC 1 cut(s) 285
PdmI GAANNNNTTC 3 cut(s) 1243, 2358, 2526
PinAI ACCGGT 1 cut(s) 209
PleI GAGTC 5 cut(s) 55, 547, 2290, 2383, 2621
PpsI GAGTC 5 cut(s) 55, 547, 2290, 2383, 2621
Ppu21I YACGTR 3 cut(s) 1011, 2049, 2888
PpuMI RGGWCCY 2 cut(s) 1359, 2600
PsiI TTATAA 1 cut(s) 2388
Psp124BI GAGCTC 1 cut(s) 2334
Psp5II RGGWCCY 2 cut(s) 1359, 2600
Psp6I CCWGG 5 cut(s) 367, 1134, 1265, 1337, 1854
PspGI CCWGG 5 cut(s) 367, 1134, 1265, 1337, 1854
PspN4I GGNNCC 6 cut(s) 452, 1122, 1187, 1427, 2602, 2871
PspPI GGNCC 5 cut(s) 31, 1057, 1359, 2600, 2701
PspPPI RGGWCCY 2 cut(s) 1359, 2600
PstI CTGCAG 2 cut(s) 1543, 1651
PstNI CAGNNNCTG 1 cut(s) 242
PsuI RGATCY 7 cut(s) 180, 371, 450, 806, 848, 1120, 1666
PvuII CAGCTG 1 cut(s) 1262
RsaI GTAC 8 cut(s) 672, 1298, 1336, 1352, 2051, 2083, 2517, 2755
RsaNI GTAC 8 cut(s) 671, 1297, 1335, 1351, 2050, 2082, 2516, 2754
RseI CAYNNNNRTG 4 cut(s) 666, 1071, 1949, 2295
SacI GAGCTC 1 cut(s) 2334
SaqAI TTAA 7 cut(s) 344, 858, 1142, 1587, 1809, 1976, 2771
Sau96I GGNCC 5 cut(s) 31, 1057, 1359, 2600, 2701
SchI GAGTC 5 cut(s) 56, 548, 2291, 2384, 2621
ScrFI CCNGG 5 cut(s) 369, 1136, 1267, 1339, 1856
SduI GDGCHC 1 cut(s) 2334
SfaNI GCATC 9 cut(s) 601, 670, 898, 1093, 1427, 1537, 1615, 1963, 2547
SfcI CTRYAG 2 cut(s) 1539, 1647
SfuI TTCGAA 2 cut(s) 1746, 2530
SgrAI CRCCGGYG 1 cut(s) 283
SinI GGWCC 4 cut(s) 1057, 1359, 2600, 2701
SmiMI CAYNNNNRTG 4 cut(s) 666, 1071, 1949, 2295
SmlI CTYRAG 4 cut(s) 641, 1808, 2474, 2930
SmoI CTYRAG 4 cut(s) 641, 1808, 2474, 2930
SnaBI TACGTA 1 cut(s) 2049
SspI AATATT 2 cut(s) 1222, 1515
SstI GAGCTC 1 cut(s) 2334
StyD4I CCNGG 5 cut(s) 367, 1134, 1265, 1337, 1854
StyI CCWWGG 3 cut(s) 918, 1230, 2697
TaiI ACGT 9 cut(s) 88, 424, 917, 965, 1013, 1352, 2051, 2420, 2890
TaqI TCGA 9 cut(s) 416, 477, 1746, 2463, 2484, 2530, 2709, 2799, 2825
TaqII GACCGA 1 cut(s) 1227
TatI WGTACW 3 cut(s) 2081, 2515, 2753
TauI GCSGC 7 cut(s) 58, 61, 64, 194, 317, 2037, 2345
Tru1I TTAA 7 cut(s) 344, 858, 1142, 1587, 1809, 1976, 2771
Tru9I TTAA 7 cut(s) 344, 858, 1142, 1587, 1809, 1976, 2771
TscAI CASTG 7 cut(s) 175, 842, 1158, 1708, 2236, 2731, 2861
TseFI GTSAC 3 cut(s) 66, 833, 2185
TseI GCWGC 9 cut(s) 512, 571, 991, 1262, 1538, 1646, 1834, 1889, 2031
Tsp45I GTSAC 3 cut(s) 66, 833, 2185
TspGWI ACGGA 8 cut(s) 152, 608, 843, 1521, 1590, 1718, 2697, 2823
TspRI CASTG 7 cut(s) 175, 842, 1158, 1708, 2236, 2731, 2861
Vha464I CTTAAG 1 cut(s) 1808
VpaK11BI GGWCC 4 cut(s) 1057, 1359, 2600, 2701
XagI CCTNNNNNAGG 1 cut(s) 1463
XapI RAATTY 5 cut(s) 1828, 2096, 2173, 2491, 2714
XbaI TCTAGA 1 cut(s) 2456
XceI RCATGY 2 cut(s) 198, 2056
XmiI GTMKAC 1 cut(s) 50
XmnI GAANNNNTTC 3 cut(s) 1243, 2358, 2526
ZraI GACGTC 1 cut(s) 915
Zsp2I ATGCAT 1 cut(s) 1956
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.