Rh6BG440700

Plant family of unknown function (DUF810)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6B
OG0013421
Physical Location & Seq
Reverse (-)
65844849 .. 65849420
4572 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6BG440700.1

Sequence Viewer

Length: 2202 bp
ATGCAGGTTCTTCGTAGTGCTGTTACGGCTCTTGCTTCCAGGTCATCTGATGGCTTATATGATACGTCCCACTGGGCTGATGGGTTACCATTGAATCTCCGCATTTATGAAATGCTTCTCCAAGCCGTGTTTGATAATCACGATGAGACATCTGTAATAGAGGAAGTGGACGAGCTAATGGAGCATATTAAGAAGACCTGGTCAATCCTCGGACTTAATCAGATGCTCCACAACCTTTGCTTTACGTGGGTTTTGTTTAACCGTTTTGTTGCTACCGGCCAAGTTGAATTGGACCTGTTGTATGCTGCTGATACGCAGCTAGCCGAGGTTGCTAAAGATGCAAAGGCAACAAAGGATCCCGAGTACTGCAAGATCTTGAGTTCGACATTGACTTCAATATTGGGTTGGGCAGAGAAGAGACTCCTAGCCTATCATGACACTTTTGATAGCAGTAATATTGATACCATGCAGGCCATTGTTTCTCTGGGAGTAGCAGCAGCTAAGATTCTAGTTGAAGACATATCAAATGAGTATCGCAGGAGGAGAAAAAATGAAGTTGACGTTGCTCGCAACAGGATTGACACTTACATTAGATCATCATTACGCACTGCTTTTGCTCAGATGATGGAGAAGGCAGATTCCAGCAGGAGAGCATCAAGAAACCAGCCAAACCCCCTTCCCGTGCTGGCCATCCTTGCAAAGGATGTTGGTGAGCTGGCAGTTAAGGAGAAGCAGTTGTTCAGTCCAATACTAAAGATATGGCATCCTTTTGCTGCCGGTGTGGCTGTGGCAACTCTTCATGCTTGCTATGCGAATGAAATTAAACAGTTCATATCGGGTATAGCGGAGTTGACACCGGATGCTGTACAAGTTTTGAGAGCTGCAGATAAGCTGGAGAAAGATCTTGTGCTCATAGCAGTTGAGGATTCTGTAGACAGTGATGATGGTGGCAAGGCAATAATTCGTGAGATGCCTCCTTATGAGGCTGAAGCTGCAATTGCAAATCTGGTAAAAGTGTGGATCAAGACAAGAGTGGACAGACTTAAAGAATGGGTTGATAGGAATCTGCAACAAGAGGAGTGGAATCCACCAGCAAGTGAAGATGGATATGCTCCATCTGCTGTTGAAGTTTTGCGGATTTTCGATGAAACTCTGGTTGCATTCTTTCAGCTGCCAATACCAATGCATCCTGCATTGCTTCCTGACTTGATGGCTGGCCTTGATAGATGTCTTCAATATTACGTAACCAAGACAAAATCTGGATGTGGATCACGTAATACATTTGTTCCCACTATGCCTGCATTAACCAGATGCACTATGGAATCAAAGTTCCAAGGTTTTGGCAAAAAGAAAGAAAAAACGCCAACTTCTCAGAAGAGGAACTCTCAGGTTGCAACAGTCAATGGGGATAACTCTTTCGGGATACCACAGTTGCTTTGTCGCATAAACACATTGCAGAGAATCCGGAGTGAGTTAGAAGTTTTGGAGAAACGGATTGTTACTCATCTGAGGAATTCTGAATCTGCTCATGTAGAAGACTTTTCGAATGGATTGGGGAAGAAGTTTGAGCTCTCTCCTGCGGCTTGTGTGGAGGTAATCACACAACTTTGTGAGGCAGTAGCTTATAAAATGGTCTTCCATGACCTCAGTCACGTTCTGTGGGATGGTTTGTATGTTGGAGAACCATCATCTTCTAGAATAGAGCCTTTTCTTGACGAGCTGGAGAAGAACTTACTTATCGTATCAAATACAGTGCATGAAAGAGTACGTACACGCATTATTACTGACATAATGAGAGCTTCCTTTGATGGTTTCTTGCTGGTTTTGCTTGCCGGAGGCCCCTCTCGTGTATTCTCCCGGAAGGATTCTCAAATAATAGAAGATGACTTCAAGTCCCTTAAAGATCTGTTCTGGGCCAATGGGGATGGCTTGCCTTCTGAATTGATAGATAAGTTTACAACTACAGTTAGAGGTGTACTTCCCCTTTTCAGAACTGATACTGAGAGTCTCATAGAACGGTTTAGACGTGTGACCTTGGAGTCATATGGCTCTTCTGCCAGATCCAGACTCCCTTTACCCCCTACTTCCGGGCAGTGGAATCCAACTGAACCAAACACGCTCCTCCGTGTGTTGTGCAATAGAAATGATGAAGCAGCTTCTAAGTTTCTTAAGAAGACTTATAATTTGCCCAAGAAACTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF810

Protein Analysis

733

Amino Acids

82.45

Weight (kDa)

6.1

Isoelectric Point (pI)

45.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPR_PATROL1 PF25761 333 - 732 2.3e-173 PATROL1-like, TPR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013421)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G25800
fragaria_vesca FvH4_2g35590 FvH4_2g35590
malus_domestica MD08G1113600.v1.1 MD15G1093300.v1.1
prunus_persica Prupe.1G448100_v2.0.a1
pyrus_communis pycom08g09420 pycom15g08610
rosa_chinensis RchiOBHm_Chr6g0306221
rosa_laevigata RLG00000010812
rosa_multiflora Rmu_sc0003594.1_g000002
rosa_roxburghii Rroxscaffold_7G00161920
rosa_rugosa Rorug06G0348100
rosa_samantha Rh6AG460700 Rh6BG440700 Rh6CG474700 Rh6DG461000
rosa_wichuraiana Rw6G040130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1626, 2181
AasI GACNNNNNNGTC 1 cut(s) 2038
AccI GTMKAC 1 cut(s) 933
AccIII TCCGGA 1 cut(s) 1464
AciI CCGC 4 cut(s) 100, 845, 1135, 1580
AclWI GGATC 5 cut(s) 350, 363, 1028, 1276, 2055
AcoI YGGCCR 2 cut(s) 277, 687
AcsI RAATTY 1 cut(s) 1513
AcuI CTGAAG 1 cut(s) 1008
AfaI GTAC 5 cut(s) 365, 867, 1767, 1771, 1977
AfiI CCNNNNNNNGG 3 cut(s) 700, 2087, 2094
AflII CTTAAG 1 cut(s) 2168
AflIII ACRYGT 1 cut(s) 2026
AgsI TTSAA 7 cut(s) 94, 287, 396, 515, 1127, 1235, 1891
AhdI GACNNNNNGTC 1 cut(s) 1891
AjiI CACGTC 1 cut(s) 2027
AjnI CCWGG 2 cut(s) 38, 197
AloI GAACNNNNNNTCC 2 cut(s) 1313, 1345
Alw21I GWGCWC 2 cut(s) 912, 1572
Alw26I GTCTC 3 cut(s) 140, 412, 2012
AlwI GGATC 5 cut(s) 350, 363, 1028, 1276, 2055
Ama87I CYCGRG 1 cut(s) 359
Aor13HI TCCGGA 1 cut(s) 1464
AoxI GGCC 6 cut(s) 277, 471, 687, 1216, 1837, 1914
ApeKI GCWGC 9 cut(s) 305, 316, 494, 497, 773, 881, 992, 1171, 2153
ApoI RAATTY 1 cut(s) 1513
ArsI GACNNNNNNTTYG 2 cut(s) 2167, 2199
Asp700I GAANNNNTTC 1 cut(s) 114
AspS9I GGNCC 3 cut(s) 292, 1838, 1914
AsuC2I CCSGG 2 cut(s) 1858, 2089
AsuHPI GGTGA 1 cut(s) 722
AsuII TTCGAA 1 cut(s) 1544
AsuNHI GCTAGC 1 cut(s) 319
AvaI CYCGRG 1 cut(s) 359
AvaII GGWCC 1 cut(s) 292
BaeI ACNNNNGTAYC 2 cut(s) 1415, 1448
BalI TGGCCA 1 cut(s) 689
BamHI GGATCC 1 cut(s) 355
BanII GRGCYC 1 cut(s) 1572
BauI CACGAG 1 cut(s) 1845
BbsI GAAGAC 6 cut(s) 200, 522, 1223, 1542, 1627, 2180
Bbv12I GWGCWC 2 cut(s) 912, 1572
BbvI GCAGC 9 cut(s) 292, 328, 506, 509, 760, 868, 979, 1158, 2165
BceAI ACGGC 2 cut(s) 42, 110
BcgI CGANNNNNNTGC 1 cut(s) 27
BciT130I CCWGG 2 cut(s) 40, 199
BciVI GTATCC 1 cut(s) 1416
BcnI CCSGG 2 cut(s) 1858, 2089
BcoDI GTCTC 3 cut(s) 140, 412, 2012
BfaI CTAG 4 cut(s) 320, 425, 509, 1695
BfmI CTRYAG 3 cut(s) 882, 930, 1962
BfrI CTTAAG 1 cut(s) 2168
BfuI GTATCC 1 cut(s) 1416
BglI GCCNNNNNGGC 1 cut(s) 782
BglII AGATCT 3 cut(s) 372, 901, 1903
BmcAI AGTACT 1 cut(s) 365
Bme1390I CCNGG 4 cut(s) 40, 199, 1858, 2089
Bme18I GGWCC 1 cut(s) 292
BmeRI GACNNNNNGTC 1 cut(s) 1891
BmeT110I CYCGRG 1 cut(s) 359
BmgBI CACGTC 1 cut(s) 2027
BmgT120I GGNCC 3 cut(s) 292, 1838, 1914
BmiI GGNNCC 2 cut(s) 357, 1840
BmrFI CCNGG 4 cut(s) 40, 199, 1858, 2089
BmrI ACTGGG 1 cut(s) 82
BmsI GCATC 8 cut(s) 213, 328, 662, 772, 850, 960, 1195, 1301
BmtI GCTAGC 1 cut(s) 323
BmuI ACTGGG 1 cut(s) 82
BoxI GACNNNNGTC 1 cut(s) 1647
BpiI GAAGAC 6 cut(s) 200, 522, 1223, 1542, 1627, 2180
BplI GAGNNNNNCTC 2 cut(s) 1369, 1401
BpmI CTGGAG 2 cut(s) 914, 1742
Bpu14I TTCGAA 1 cut(s) 1544
BpuEI CTTGAG 1 cut(s) 397
BpuMI CCSGG 2 cut(s) 1858, 2089
BsaAI YACGTR 4 cut(s) 246, 1243, 1274, 1769
BsaBI GATNNNNATC 2 cut(s) 1062, 1267
BsaJI CCNNGG 4 cut(s) 208, 324, 1333, 2034
BsaWI WCCGGW 2 cut(s) 856, 1464
BsaXI ACNNNNNCTCC 2 cut(s) 719, 749
Bsc4I CCNNNNNNNGG 3 cut(s) 700, 2087, 2094
Bse118I RCCGGY 2 cut(s) 275, 776
Bse1I ACTGG 1 cut(s) 77
Bse3DI GCAATG 2 cut(s) 1193, 1451
Bse8I GATNNNNATC 2 cut(s) 1062, 1267
BseAI TCCGGA 1 cut(s) 1464
BseBI CCWGG 2 cut(s) 40, 199
BseDI CCNNGG 4 cut(s) 208, 324, 1333, 2034
BseGI GGATG 8 cut(s) 690, 709, 763, 865, 1186, 1268, 1669, 1930
BseJI GATNNNNATC 2 cut(s) 1062, 1267
BseLI CCNNNNNNNGG 3 cut(s) 700, 2087, 2094
BseMI GCAATG 2 cut(s) 1193, 1451
BseMII CTCAG 6 cut(s) 632, 1385, 1400, 1499, 1660, 1992
BseNI ACTGG 1 cut(s) 77
BseRI GAGGAG 3 cut(s) 556, 1091, 2111
BseXI GCAGC 9 cut(s) 292, 328, 506, 509, 760, 868, 979, 1158, 2165
BshFI GGCC 6 cut(s) 279, 473, 689, 1218, 1839, 1916
BsiHKAI GWGCWC 2 cut(s) 912, 1572
BsiHKCI CYCGRG 1 cut(s) 359
BsiSI CCGG 7 cut(s) 276, 777, 857, 1465, 1833, 1858, 2088
BslFI GGGAC 2 cut(s) 52, 1879
BslI CCNNNNNNNGG 3 cut(s) 700, 2087, 2094
BsmAI GTCTC 3 cut(s) 140, 412, 2012
BsmFI GGGAC 2 cut(s) 52, 1879
BsmI GAATGC 1 cut(s) 1160
BsnI GGCC 6 cut(s) 279, 473, 689, 1218, 1839, 1916
BsoBI CYCGRG 1 cut(s) 359
Bsp119I TTCGAA 1 cut(s) 1544
Bsp1286I GDGCHC 2 cut(s) 912, 1572
Bsp13I TCCGGA 1 cut(s) 1464
Bsp1407I TGTACA 1 cut(s) 865
Bsp143I GATC 8 cut(s) 355, 372, 593, 901, 1020, 1268, 1903, 2060
BspACI CCGC 4 cut(s) 100, 845, 1135, 1580
BspANI GGCC 6 cut(s) 279, 473, 689, 1218, 1839, 1916
BspCNI CTCAG 6 cut(s) 631, 1384, 1399, 1500, 1659, 1993
BspEI TCCGGA 1 cut(s) 1464
BspHI TCATGA 1 cut(s) 433
BspLI GGNNCC 2 cut(s) 357, 1840
BspMAI CTGCAG 1 cut(s) 886
BspOI GCTAGC 1 cut(s) 323
BspPI GGATC 5 cut(s) 350, 363, 1028, 1276, 2055
BspQI GCTCTTC 1 cut(s) 2056
BspT104I TTCGAA 1 cut(s) 1544
BspTI CTTAAG 1 cut(s) 2168
BsrDI GCAATG 2 cut(s) 1193, 1451
BsrFI RCCGGY 2 cut(s) 275, 776
BsrGI TGTACA 1 cut(s) 865
BsrI ACTGG 1 cut(s) 77
BssAI RCCGGY 2 cut(s) 275, 776
BssECI CCNNGG 4 cut(s) 208, 324, 1333, 2034
BssMI GATC 8 cut(s) 355, 372, 593, 901, 1020, 1268, 1903, 2060
BssSI CACGAG 1 cut(s) 1845
BssT1I CCWWGG 2 cut(s) 1333, 2034
Bst2BI CACGAG 1 cut(s) 1845
Bst2UI CCWGG 2 cut(s) 40, 199
Bst4CI ACNGT 8 cut(s) 263, 828, 938, 1399, 1431, 1753, 1966, 2019
Bst6I CTCTTC 4 cut(s) 410, 801, 1370, 2056
BstAFI CTTAAG 1 cut(s) 2168
BstAUI TGTACA 1 cut(s) 865
BstBAI YACGTR 4 cut(s) 246, 1243, 1274, 1769
BstBI TTCGAA 1 cut(s) 1544
BstDEI CTNAG 8 cut(s) 501, 618, 1371, 1386, 1508, 1646, 2001, 2160
BstEII GGTNACC 1 cut(s) 84
BstENI CCTNNNNNAGG 1 cut(s) 698
BstF5I GGATG 8 cut(s) 690, 709, 763, 865, 1186, 1268, 1669, 1930
BstKTI GATC 8 cut(s) 358, 375, 596, 904, 1023, 1271, 1906, 2063
BstMAI GTCTC 3 cut(s) 140, 412, 2012
BstMBI GATC 8 cut(s) 355, 372, 593, 901, 1020, 1268, 1903, 2060
BstNI CCWGG 2 cut(s) 40, 199
BstPAI GACNNNNGTC 1 cut(s) 1647
BstPI GGTNACC 1 cut(s) 84
BstSCI CCNGG 4 cut(s) 38, 197, 1856, 2087
BstSFI CTRYAG 3 cut(s) 882, 930, 1962
BstSNI TACGTA 2 cut(s) 1243, 1769
BstV1I GCAGC 9 cut(s) 292, 328, 506, 509, 760, 868, 979, 1158, 2165
BstV2I GAAGAC 6 cut(s) 200, 522, 1223, 1542, 1627, 2180
BstX2I RGATCY 5 cut(s) 355, 372, 901, 1903, 2060
BstXI CCANNNNNNTGG 1 cut(s) 1340
BstYI RGATCY 5 cut(s) 355, 372, 901, 1903, 2060
BsuI GTATCC 1 cut(s) 1416
BsuRI GGCC 6 cut(s) 279, 473, 689, 1218, 1839, 1916
BtrI CACGTC 1 cut(s) 2027
BtsCI GGATG 8 cut(s) 690, 709, 763, 865, 1186, 1268, 1669, 1930
BtsI GCAGTG 2 cut(s) 606, 2099
BtsIMutI CAGTG 5 cut(s) 70, 606, 943, 1758, 2099
CciI TCATGA 1 cut(s) 433
Cfr10I RCCGGY 2 cut(s) 275, 776
Cfr13I GGNCC 3 cut(s) 292, 1838, 1914
CsiI ACCWGGT 1 cut(s) 197
Csp6I GTAC 5 cut(s) 364, 866, 1766, 1770, 1976
CspCI CAANNNNNGTGG 4 cut(s) 218, 253, 1061, 1096
CviAII CATG 6 cut(s) 434, 466, 800, 1529, 1640, 1757
CviQI GTAC 5 cut(s) 364, 866, 1766, 1770, 1976
DdeI CTNAG 8 cut(s) 501, 618, 1371, 1386, 1508, 1646, 2001, 2160
DpnI GATC 8 cut(s) 357, 374, 595, 903, 1022, 1270, 1905, 2062
DpnII GATC 8 cut(s) 355, 372, 593, 901, 1020, 1268, 1903, 2060
DrdI GACNNNNNNGTC 1 cut(s) 2038
DriI GACNNNNNGTC 1 cut(s) 1891
DseDI GACNNNNNNGTC 1 cut(s) 2038
EaeI YGGCCR 2 cut(s) 277, 687
Eam1104I CTCTTC 4 cut(s) 410, 801, 1370, 2056
Eam1105I GACNNNNNGTC 1 cut(s) 1891
EarI CTCTTC 4 cut(s) 410, 801, 1370, 2056
Ecl136II GAGCTC 1 cut(s) 1570
Eco105I TACGTA 2 cut(s) 1243, 1769
Eco130I CCWWGG 2 cut(s) 1333, 2034
Eco24I GRGCYC 1 cut(s) 1572
Eco47I GGWCC 1 cut(s) 292
Eco53kI GAGCTC 1 cut(s) 1570
Eco57I CTGAAG 1 cut(s) 1008
Eco88I CYCGRG 1 cut(s) 359
Eco91I GGTNACC 1 cut(s) 84
EcoICRI GAGCTC 1 cut(s) 1570
EcoNI CCTNNNNNAGG 1 cut(s) 698
EcoO109I RGGNCCY 1 cut(s) 1838
EcoO65I GGTNACC 1 cut(s) 84
EcoRI GAATTC 1 cut(s) 1513
EcoRII CCWGG 2 cut(s) 38, 197
EcoT14I CCWWGG 2 cut(s) 1333, 2034
EcoT22I ATGCAT 1 cut(s) 1188
EcoT38I GRGCYC 1 cut(s) 1572
ErhI CCWWGG 2 cut(s) 1333, 2034
FaeI CATG 6 cut(s) 437, 469, 803, 1532, 1643, 1760
FaqI GGGAC 2 cut(s) 52, 1879
FatI CATG 6 cut(s) 433, 465, 799, 1528, 1639, 1756
FauNDI CATATG 1 cut(s) 2044
FblI GTMKAC 1 cut(s) 933
FokI GGATG 8 cut(s) 677, 716, 750, 872, 1173, 1275, 1676, 1937
FriOI GRGCYC 1 cut(s) 1572
FspBI CTAG 4 cut(s) 320, 425, 509, 1695
GsuI CTGGAG 2 cut(s) 914, 1742
HaeIII GGCC 6 cut(s) 279, 473, 689, 1218, 1839, 1916
HapII CCGG 7 cut(s) 276, 777, 857, 1465, 1833, 1858, 2088
Hin1II CATG 6 cut(s) 437, 469, 803, 1532, 1643, 1760
HincII GTYRAC 2 cut(s) 559, 852
HindII GTYRAC 2 cut(s) 559, 852
HpaII CCGG 7 cut(s) 276, 777, 857, 1465, 1833, 1858, 2088
HphI GGTGA 1 cut(s) 722
Hpy166II GTNNAC 8 cut(s) 169, 559, 852, 934, 1036, 1772, 1956, 1976
Hpy188I TCNGA 9 cut(s) 49, 212, 222, 621, 1374, 1509, 1519, 1939, 1991
Hpy8I GTNNAC 8 cut(s) 169, 559, 852, 934, 1036, 1772, 1956, 1976
HpyAV CCTTC 4 cut(s) 625, 686, 1855, 1944
HpyCH4III ACNGT 8 cut(s) 263, 828, 938, 1399, 1431, 1753, 1966, 2019
HpyCH4IV ACGT 8 cut(s) 65, 245, 561, 1242, 1273, 1653, 1768, 2026
HpyF3I CTNAG 8 cut(s) 501, 618, 1371, 1386, 1508, 1646, 2001, 2160
HpySE526I ACGT 8 cut(s) 65, 245, 561, 1242, 1273, 1653, 1768, 2026
Hsp92II CATG 6 cut(s) 437, 469, 803, 1532, 1643, 1760
Kpn2I TCCGGA 1 cut(s) 1464
Kzo9I GATC 8 cut(s) 355, 372, 593, 901, 1020, 1268, 1903, 2060
LguI GCTCTTC 1 cut(s) 2056
LmnI GCTCC 4 cut(s) 181, 231, 1117, 2124
Lsp1109I GCAGC 9 cut(s) 292, 328, 506, 509, 760, 868, 979, 1158, 2165
LweI GCATC 8 cut(s) 213, 328, 662, 772, 850, 960, 1195, 1301
MabI ACCWGGT 1 cut(s) 197
MaeI CTAG 4 cut(s) 320, 425, 509, 1695
MaeII ACGT 8 cut(s) 65, 245, 561, 1242, 1273, 1653, 1768, 2026
MaeIII GTNAC 6 cut(s) 22, 84, 1243, 1498, 1649, 2029
MalI GATC 8 cut(s) 357, 374, 595, 903, 1022, 1270, 1905, 2062
MboI GATC 8 cut(s) 355, 372, 593, 901, 1020, 1268, 1903, 2060
MfeI CAATTG 1 cut(s) 996
MflI RGATCY 5 cut(s) 355, 372, 901, 1903, 2060
MhlI GDGCHC 2 cut(s) 912, 1572
MlsI TGGCCA 1 cut(s) 689
MluCI AATT 7 cut(s) 287, 819, 960, 996, 1513, 1940, 2182
MluNI TGGCCA 1 cut(s) 689
MlyI GAGTC 4 cut(s) 414, 2014, 2048, 2061
MmeI TCCRAC 2 cut(s) 1657, 2126
Mox20I TGGCCA 1 cut(s) 689
Mph1103I ATGCAT 1 cut(s) 1188
MroI TCCGGA 1 cut(s) 1464
MroXI GAANNNNTTC 1 cut(s) 114
MscI TGGCCA 1 cut(s) 689
MseI TTAA 9 cut(s) 189, 216, 258, 723, 822, 1044, 1304, 1899, 2169
Msp20I TGGCCA 1 cut(s) 689
MspA1I CMGCKG 1 cut(s) 1171
MspCI CTTAAG 1 cut(s) 2168
MspI CCGG 7 cut(s) 276, 777, 857, 1465, 1833, 1858, 2088
MspR9I CCNGG 4 cut(s) 40, 199, 1858, 2089
MunI CAATTG 1 cut(s) 996
Mva1269I GAATGC 1 cut(s) 1160
MvaI CCWGG 2 cut(s) 40, 199
NciI CCSGG 2 cut(s) 1858, 2089
NdeI CATATG 1 cut(s) 2044
NdeII GATC 8 cut(s) 355, 372, 593, 901, 1020, 1268, 1903, 2060
NheI GCTAGC 1 cut(s) 319
NlaIII CATG 6 cut(s) 437, 469, 803, 1532, 1643, 1760
NlaIV GGNNCC 2 cut(s) 357, 1840
NmeAIII GCCGAG 1 cut(s) 349
NmuCI GTSAC 2 cut(s) 1649, 2029
NsiI ATGCAT 1 cut(s) 1188
NspV TTCGAA 1 cut(s) 1544
PagI TCATGA 1 cut(s) 433
PciSI GCTCTTC 1 cut(s) 2056
PcsI WCGNNNNNNNCGW 1 cut(s) 2023
PctI GAATGC 1 cut(s) 1160
PdmI GAANNNNTTC 1 cut(s) 114
PflFI GACNNNGTC 1 cut(s) 199
PfoI TCCNGGA 1 cut(s) 1856
PleI GAGTC 4 cut(s) 414, 2013, 2047, 2061
PpsI GAGTC 4 cut(s) 414, 2013, 2047, 2061
Ppu21I YACGTR 4 cut(s) 246, 1243, 1274, 1769
PshAI GACNNNNGTC 1 cut(s) 1647
PsiI TTATAA 2 cut(s) 1626, 2181
Psp124BI GAGCTC 1 cut(s) 1572
Psp6I CCWGG 2 cut(s) 38, 197
PspEI GGTNACC 1 cut(s) 84
PspGI CCWGG 2 cut(s) 38, 197
PspN4I GGNNCC 2 cut(s) 357, 1840
PspPI GGNCC 3 cut(s) 292, 1838, 1914
PstI CTGCAG 1 cut(s) 886
PsuI RGATCY 5 cut(s) 355, 372, 901, 1903, 2060
PsyI GACNNNGTC 1 cut(s) 199
PvuII CAGCTG 1 cut(s) 1171
RsaI GTAC 5 cut(s) 365, 867, 1767, 1771, 1977
RsaNI GTAC 5 cut(s) 364, 866, 1766, 1770, 1976
SacI GAGCTC 1 cut(s) 1572
SapI GCTCTTC 1 cut(s) 2056
SaqAI TTAA 9 cut(s) 189, 216, 258, 723, 822, 1044, 1304, 1899, 2169
Sau3AI GATC 8 cut(s) 355, 372, 593, 901, 1020, 1268, 1903, 2060
Sau96I GGNCC 3 cut(s) 292, 1838, 1914
ScaI AGTACT 1 cut(s) 365
SchI GAGTC 4 cut(s) 414, 2014, 2048, 2061
ScrFI CCNGG 4 cut(s) 40, 199, 1858, 2089
SduI GDGCHC 2 cut(s) 912, 1572
SexAI ACCWGGT 1 cut(s) 197
SfaNI GCATC 8 cut(s) 213, 328, 662, 772, 850, 960, 1195, 1301
SfcI CTRYAG 3 cut(s) 882, 930, 1962
SfuI TTCGAA 1 cut(s) 1544
SinI GGWCC 1 cut(s) 292
SmlI CTYRAG 2 cut(s) 376, 2168
SmoI CTYRAG 2 cut(s) 376, 2168
SnaBI TACGTA 2 cut(s) 1243, 1769
Sse9I AATT 7 cut(s) 287, 819, 960, 996, 1513, 1940, 2182
SsiI CCGC 4 cut(s) 100, 845, 1135, 1580
SspI AATATT 3 cut(s) 399, 457, 1238
SspMI CTAG 4 cut(s) 320, 425, 509, 1695
SstI GAGCTC 1 cut(s) 1572
StyD4I CCNGG 4 cut(s) 38, 197, 1856, 2087
StyI CCWWGG 2 cut(s) 1333, 2034
TaaI ACNGT 8 cut(s) 263, 828, 938, 1399, 1431, 1753, 1966, 2019
TaiI ACGT 8 cut(s) 68, 248, 564, 1245, 1276, 1656, 1771, 2029
TaqI TCGA 3 cut(s) 383, 1143, 1544
TasI AATT 7 cut(s) 287, 819, 960, 996, 1513, 1940, 2182
TatI WGTACW 3 cut(s) 363, 865, 1975
TauI GCSGC 1 cut(s) 1583
Tru1I TTAA 9 cut(s) 189, 216, 258, 723, 822, 1044, 1304, 1899, 2169
Tru9I TTAA 9 cut(s) 189, 216, 258, 723, 822, 1044, 1304, 1899, 2169
TscAI CASTG 5 cut(s) 77, 613, 943, 1758, 2099
TseFI GTSAC 2 cut(s) 1649, 2029
TseI GCWGC 9 cut(s) 305, 316, 494, 497, 773, 881, 992, 1171, 2153
Tsp45I GTSAC 2 cut(s) 1649, 2029
TspDTI ATGAA 8 cut(s) 123, 567, 788, 820, 831, 1161, 1773, 2163
TspGWI ACGGA 2 cut(s) 1507, 2114
TspRI CASTG 5 cut(s) 77, 613, 943, 1758, 2099
Tth111I GACNNNGTC 1 cut(s) 199
Vha464I CTTAAG 1 cut(s) 2168
VpaK11BI GGWCC 1 cut(s) 292
XagI CCTNNNNNAGG 1 cut(s) 698
XapI RAATTY 1 cut(s) 1513
XbaI TCTAGA 1 cut(s) 1694
XcmI CCANNNNNNNNNTGG 3 cut(s) 77, 481, 1315
XmiI GTMKAC 1 cut(s) 933
XmnI GAANNNNTTC 1 cut(s) 114
XspI CTAG 4 cut(s) 320, 425, 509, 1695
ZrmI AGTACT 1 cut(s) 365
Zsp2I ATGCAT 1 cut(s) 1188
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.