Rh6AG460700

Plant family of unknown function (DUF810)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
OG0013421
Physical Location & Seq
Forward (+)
64362711 .. 64367423
4713 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG460700.1

Sequence Viewer

Length: 2994 bp
ATGGCTCATCTTTTCAGGGAGCTCTCACTGGGCCATTCGAAGAGAGGGGCCCACTCCACCACCGGCAGCGCCCCCGCGCTGACGATACCTACGAAGCCGACCACCATGGCCACGGATCTCCCGTCCCCATTGGGCCAGCTCTCGGCCCAGCTCACCGATTCGGAGCTCCGGCTCACCGCCTACGAGATCTTCGTCGCCGCCTGCCGCACCTCAACCGGCAAAGCCCTGACTTTCGTCTCTTCTTCGCTCTCCGACTCGCCGACTCAGCAGCACACCAACGGCGCCGCCAGCTCCCCCAATGGCTCGCCGGCGCTGCAGAGATCGCTCACCTCCGCCGCCGCCAGCAAGATGAAGAAGGCATTGGGCCTCAAATCGCCGGGTTCTTCTTCCGGGTCGAAGAAGAGCCCCGGGTCCGGGTCCGGGTCGGGGCCCGGAAAGCCCAAGCGGGCTATGACGGTGGGGGAGCTGATGAGGATCCAAATGGGGATTTCTGAAGCTATGGACTCCAGAGTCAGGAGAGCTCTGCTTAGAATTTCAGCTGGACAGGTAGGACGGCGAATTGAGTCGGTTGTAGTCCCACTGGAGCTGTTACAGCAGCTCAAGTCGTCTGATTTTACTGACCCGCAGGAACACGAAGAATGGCAGAAAAGAACCCTTAAGATTCTTGAGGCTGGTCTACTTTTGCATCCCTTTGTGCCGCTAGACAAGTCCAATAGCGCTGCACAGCGGCTACGACAGATTATTCATGGAGCGTTGGACAGGCCCTTTGAAACGGGGAGAAATAATGAGTCCATGCAGGTTCTTCGTAGTGCTGTTACGGCCCTTGCTTCCAGGTCATCTGATGGCTTATATGATACGTCCCACTGGGCAGATGGGTTACCATTGAATCTCCGCATTTATGAAATGCTTCTCCAAGCCGTGTTTGATAATCACGATGAGACATCTGTAATAGAGGAAGTGGACGAGCTAATGGAGCATATTAAGAAGACCTGGTCAATCCTCGGACTTAATCAGATGCTCCACAACCTTTGCTTTACGTGGGTTTTGTTTAACCGTTTTGTTGCTACCGGCCAAGTTGAATTGGACCTGTTGTATGCTGCTGATACGCAGCTAGCCGAGGTTGCTAAAGATGCAAAGGCAACAAAGGATCCCGAGTACTGCAAGATCTTGAGTTCGACATTGACTTCAATATTGGGTTGGGCAGAGAAGAGACTCCTAGCCTATCATGACACTTTTGATAGCAGTAATATTGATACCATGCAGGCCATTGTTTCTCTGGGAGTAGTAGCAGCTAAGATTCTAGTTGAAGACATATCAAATGAGTATCGCAGGAGGAGAAAAAATGAAGTTGACGTTGCTCGCAACAGGATTGACACTTACATTAGATCATCATTACGCACTGCTTTTGCTCAGATGATGGAGAAGGCAGATTCCAGCAGGAGAGCATCAAGAAACCAGCCAAACCCCCTTCCCGTGCTGGCCATCCTTGCAAAGGATGTTGGTGAGCTGGCAGTTAAGGAGAAGCAGTTGTTCAGTCCAATACTAAAGATATGGCATCCTTTTGCTGCCGGTGTGGCTGTGGCAACTCTTCATGCTTGCTATGCGAATGAAATTAAACAGTTCATATCGGGTATAGCGGAGTTGACACCGGATGCTGTACAAGTTTTGAGAGCTGCAGATAAGCTGGAGAAAGATCTTGTGCTCATAGCAGTTGAGGATTCTGTGGACAGTGATGATGGTGGCAAGGCAATAATTCGTGAGATGCCTCCTTATGAGGCTGAAGCTGCAATTGCAAATCTGGTAAAAGTGTGGATCAAGACAAGAGTGGACAGACTTAAAGAATGGGTTGATAGGAATCTGCAACAAGAGGAGTGGAATCCACCAGCAAGTGAAGATGGATATGCTCCATCTGCTGTTGAAGTTTTGCGAATTTTCGATGAAACTCTGGTTGCATTCTTTCAGCTGCCAATACCAATGCATCCTGCATTACTTCCTGACTTGATGGCTGGCCTTGATAGATGTCTTCAATATTACGTAACCAAGACAAAATCTGGATGTGGATCACGTAATACATTTGTTCCCACTATGCCTGCATTAACCAGATGCACTATGGAATCAAAGTTCCAAGGTTTTGGCAAAAAGAAAGAAAAAACGCCAACTTCTCAGAAGAGGAACTCTCAGGTTGCAACAGTCAATGGGGATAACTCTTTCGGGATACCACAGTTGCTTTGTCGCATAAACACATTGCAGAGAATCCGGAGTGAGTTAGAAGTTTTGGAGAAACGGATTGTTACTCATCTGAGGAATTCTGAATCTGCTCATGTAGAAGACTTTTCGAATGGATTGGGGAAGAAGTTTGAGCTCTCTCCTGCGGCTTGTGTGGAGGTAATCACACAACTTTGTGAGGCAGTAGCTTATAAAATGGTCTTCCATGACCTCAGTCACGTTCTGTGGGATGGTTTGTATGTTGGAGAACCATCATCTTCTAGAATAGAGCCTTTTCTTGACGAGCTGGAGAAGAACTTACTTATCGTATCAAATACAGTGCATGAAAGAGTACGTACACGCATTATTACTGACATAATGAGAGCTTCCTTTGATGGTTTCTTGCTGGTTTTGCTTGCCGGAGGCCCCTCTCGTGTATTCTCCCGGAAGGATTCTCAAATAATAGAAGATGACTTCAAGTCCCTTAAAGATCTGTTCTGGGCCAATGGGGATGGCTTGCCTTCTGAATTGATAGATAAGTTTACAACTACAGTTAGAGGTGTACTTCCCCTTTTCAGAACTGATACTGAGAGTCTCATAGAACGGTTTAGACGTGTGACCTTGGAGTCATATGGCTCTTCTGCCAGGTCCAGACTCCCTTTACCCCCTACTTCCGGGCAGTGGAATCCAACTGAGCCAAACACGCTCCTCCGTGTGTTGTGCAATAGAAATGATGAAGCAGCTTCTAAGTTTCTTAAGAAGACTTATAATTTGCCCAAGAAACTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF810

Protein Analysis

997

Amino Acids

110.51

Weight (kDa)

8.41

Isoelectric Point (pI)

47.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPR_PATROL1 PF25761 597 - 996 4.9e-173 PATROL1-like, TPR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0013421)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G25800
fragaria_vesca FvH4_2g35590 FvH4_2g35590
malus_domestica MD08G1113600.v1.1 MD15G1093300.v1.1
prunus_persica Prupe.1G448100_v2.0.a1
pyrus_communis pycom08g09420 pycom15g08610
rosa_chinensis RchiOBHm_Chr6g0306221
rosa_laevigata RLG00000010812
rosa_multiflora Rmu_sc0003594.1_g000002
rosa_roxburghii Rroxscaffold_7G00161920
rosa_rugosa Rorug06G0348100
rosa_samantha Rh6AG460700 Rh6BG440700 Rh6CG474700 Rh6DG461000
rosa_wichuraiana Rw6G040130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 2418, 2973
AasI GACNNNNNNGTC 2 cut(s) 509, 2830
Acc36I ACCTGC 1 cut(s) 787
AccB1I GGYRCC 1 cut(s) 281
AccI GTMKAC 1 cut(s) 676
AccII CGCG 1 cut(s) 77
AccIII TCCGGA 1 cut(s) 2256
AclWI GGATC 7 cut(s) 123, 469, 482, 1142, 1155, 1820, 2068
AcoI YGGCCR 3 cut(s) 108, 1069, 1479
AcsI RAATTY 3 cut(s) 531, 1929, 2305
AcuI CTGAAG 2 cut(s) 513, 1800
AcyI GRCGYC 1 cut(s) 282
AfaI GTAC 5 cut(s) 1157, 1659, 2559, 2563, 2769
AfeI AGCGCT 1 cut(s) 718
AfiI CCNNNNNNNGG 9 cut(s) 142, 413, 414, 420, 426, 513, 1492, 2879, 2886
AflII CTTAAG 2 cut(s) 656, 2960
AflIII ACRYGT 1 cut(s) 2818
AgsI TTSAA 8 cut(s) 770, 886, 1079, 1188, 1307, 1919, 2027, 2683
AhdI GACNNNNNGTC 1 cut(s) 2683
AjiI CACGTC 1 cut(s) 2819
AjnI CCWGG 3 cut(s) 830, 989, 2849
AjuI GAANNNNNNNTTGG 2 cut(s) 344, 376
AloI GAACNNNNNNTCC 2 cut(s) 2105, 2137
Alw21I GWGCWC 5 cut(s) 24, 168, 523, 1704, 2364
Alw26I GTCTC 4 cut(s) 241, 932, 1204, 2804
AlwI GGATC 7 cut(s) 123, 469, 482, 1142, 1155, 1820, 2068
Ama87I CYCGRG 2 cut(s) 407, 1151
Aor13HI TCCGGA 1 cut(s) 2256
Aor51HI AGCGCT 1 cut(s) 718
ApaI GGGCCC 2 cut(s) 52, 432
ApoI RAATTY 3 cut(s) 531, 1929, 2305
ArsI GACNNNNNNTTYG 4 cut(s) 749, 781, 2959, 2991
Asp700I GAANNNNTTC 1 cut(s) 906
AspLEI GCGC 5 cut(s) 71, 79, 284, 313, 719
AsuC2I CCSGG 9 cut(s) 378, 391, 408, 409, 415, 421, 432, 2650, 2881
AsuHPI GGTGA 4 cut(s) 145, 166, 319, 1514
AsuII TTCGAA 2 cut(s) 38, 2336
AsuNHI GCTAGC 1 cut(s) 1111
AvaI CYCGRG 2 cut(s) 407, 1151
AvaII GGWCC 4 cut(s) 411, 417, 1084, 2853
BaeGI GKGCMC 2 cut(s) 52, 432
BaeI ACNNNNGTAYC 2 cut(s) 2207, 2240
BalI TGGCCA 2 cut(s) 110, 1481
BamHI GGATCC 2 cut(s) 474, 1147
BanI GGYRCC 1 cut(s) 281
BanII GRGCYC 7 cut(s) 24, 52, 168, 407, 432, 523, 2364
BauI CACGAG 1 cut(s) 2637
BbsI GAAGAC 6 cut(s) 992, 1314, 2015, 2334, 2419, 2972
Bbv12I GWGCWC 5 cut(s) 24, 168, 523, 1704, 2364
BceAI ACGGC 4 cut(s) 295, 569, 834, 902
BcgI CGANNNNNNTGC 2 cut(s) 785, 819
BciT130I CCWGG 3 cut(s) 832, 991, 2851
BciVI GTATCC 1 cut(s) 2208
BcnI CCSGG 9 cut(s) 378, 391, 408, 409, 415, 421, 432, 2650, 2881
BcoDI GTCTC 4 cut(s) 241, 932, 1204, 2804
BfaI CTAG 5 cut(s) 701, 1112, 1217, 1301, 2487
BfmI CTRYAG 3 cut(s) 314, 1674, 2754
BfoI RGCGCY 4 cut(s) 72, 285, 314, 720
BfrI CTTAAG 2 cut(s) 656, 2960
BfuAI ACCTGC 1 cut(s) 787
BfuI GTATCC 1 cut(s) 2208
BglI GCCNNNNNGGC 1 cut(s) 1574
BglII AGATCT 4 cut(s) 186, 1164, 1693, 2695
BmcAI AGTACT 1 cut(s) 1157
Bme18I GGWCC 4 cut(s) 411, 417, 1084, 2853
BmeRI GACNNNNNGTC 1 cut(s) 2683
BmeT110I CYCGRG 2 cut(s) 407, 1151
BmgBI CACGTC 1 cut(s) 2819
BmrI ACTGGG 2 cut(s) 38, 874
BmsI GCATC 9 cut(s) 694, 1005, 1120, 1454, 1564, 1642, 1752, 1987, 2093
BmtI GCTAGC 1 cut(s) 1115
BmuI ACTGGG 2 cut(s) 38, 874
BoxI GACNNNNGTC 2 cut(s) 233, 2439
BpiI GAAGAC 6 cut(s) 992, 1314, 2015, 2334, 2419, 2972
BplI GAGNNNNNCTC 2 cut(s) 2161, 2193
BpmI CTGGAG 4 cut(s) 490, 602, 1706, 2534
Bpu14I TTCGAA 2 cut(s) 38, 2336
BpuEI CTTGAG 3 cut(s) 584, 686, 1189
BpuMI CCSGG 9 cut(s) 378, 391, 408, 409, 415, 421, 432, 2650, 2881
BsaAI YACGTR 4 cut(s) 1038, 2035, 2066, 2561
BsaBI GATNNNNATC 3 cut(s) 473, 1854, 2059
BsaHI GRCGYC 1 cut(s) 282
BsaJI CCNNGG 8 cut(s) 105, 111, 406, 407, 1000, 1116, 2125, 2826
BsaWI WCCGGW 2 cut(s) 1648, 2256
BsaXI ACNNNNNCTCC 2 cut(s) 1511, 1541
Bsc4I CCNNNNNNNGG 9 cut(s) 142, 413, 414, 420, 426, 513, 1492, 2879, 2886
Bse118I RCCGGY 5 cut(s) 62, 215, 307, 1067, 1568
Bse1I ACTGG 3 cut(s) 33, 585, 869
Bse3DI GCAATG 1 cut(s) 2243
Bse8I GATNNNNATC 3 cut(s) 473, 1854, 2059
BseAI TCCGGA 1 cut(s) 2256
BseBI CCWGG 3 cut(s) 832, 991, 2851
BseDI CCNNGG 8 cut(s) 105, 111, 406, 407, 1000, 1116, 2125, 2826
BseGI GGATG 9 cut(s) 685, 1482, 1501, 1555, 1657, 1978, 2060, 2461, 2722
BseJI GATNNNNATC 3 cut(s) 473, 1854, 2059
BseLI CCNNNNNNNGG 9 cut(s) 142, 413, 414, 420, 426, 513, 1492, 2879, 2886
BseMI GCAATG 1 cut(s) 2243
BseMII CTCAG 8 cut(s) 278, 1424, 2177, 2192, 2291, 2452, 2784, 2889
BseNI ACTGG 3 cut(s) 33, 585, 869
BseRI GAGGAG 3 cut(s) 1348, 1883, 2903
BseSI GKGCMC 2 cut(s) 52, 432
BseYI CCCAGC 1 cut(s) 147
BsgI GTGCAG 1 cut(s) 705
Bsh1236I CGCG 1 cut(s) 77
BshNI GGYRCC 1 cut(s) 281
BsiHKAI GWGCWC 5 cut(s) 24, 168, 523, 1704, 2364
BsiHKCI CYCGRG 2 cut(s) 407, 1151
BslFI GGGAC 4 cut(s) 109, 560, 844, 2671
BslI CCNNNNNNNGG 9 cut(s) 142, 413, 414, 420, 426, 513, 1492, 2879, 2886
BsmAI GTCTC 4 cut(s) 241, 932, 1204, 2804
BsmBI CGTCTC 1 cut(s) 241
BsmFI GGGAC 4 cut(s) 109, 560, 844, 2671
BsmI GAATGC 1 cut(s) 1952
BsoBI CYCGRG 2 cut(s) 407, 1151
Bsp119I TTCGAA 2 cut(s) 38, 2336
Bsp120I GGGCCC 2 cut(s) 48, 428
Bsp1286I GDGCHC 8 cut(s) 24, 52, 168, 407, 432, 523, 1704, 2364
Bsp13I TCCGGA 1 cut(s) 2256
Bsp1407I TGTACA 1 cut(s) 1657
Bsp19I CCATGG 1 cut(s) 105
BspCNI CTCAG 8 cut(s) 277, 1423, 2176, 2191, 2292, 2451, 2785, 2890
BspEI TCCGGA 1 cut(s) 2256
BspFNI CGCG 1 cut(s) 77
BspHI TCATGA 1 cut(s) 1225
BspMAI CTGCAG 2 cut(s) 318, 1678
BspMI ACCTGC 1 cut(s) 787
BspOI GCTAGC 1 cut(s) 1115
BspPI GGATC 7 cut(s) 123, 469, 482, 1142, 1155, 1820, 2068
BspQI GCTCTTC 2 cut(s) 395, 2848
BspT104I TTCGAA 2 cut(s) 38, 2336
BspT107I GGYRCC 1 cut(s) 281
BspTI CTTAAG 2 cut(s) 656, 2960
BsrDI GCAATG 1 cut(s) 2243
BsrFI RCCGGY 5 cut(s) 62, 215, 307, 1067, 1568
BsrGI TGTACA 1 cut(s) 1657
BsrI ACTGG 3 cut(s) 33, 585, 869
BssAI RCCGGY 5 cut(s) 62, 215, 307, 1067, 1568
BssECI CCNNGG 8 cut(s) 105, 111, 406, 407, 1000, 1116, 2125, 2826
BssNI GRCGYC 1 cut(s) 282
BssSI CACGAG 1 cut(s) 2637
BssT1I CCWWGG 3 cut(s) 105, 2125, 2826
Bst2BI CACGAG 1 cut(s) 2637
Bst2UI CCWGG 3 cut(s) 832, 991, 2851
Bst6I CTCTTC 7 cut(s) 35, 244, 395, 1202, 1593, 2162, 2848
BstACI GRCGYC 1 cut(s) 282
BstAFI CTTAAG 2 cut(s) 656, 2960
BstAUI TGTACA 1 cut(s) 1657
BstBAI YACGTR 4 cut(s) 1038, 2035, 2066, 2561
BstBI TTCGAA 2 cut(s) 38, 2336
BstDSI CCRYGG 2 cut(s) 105, 111
BstEII GGTNACC 1 cut(s) 876
BstENI CCTNNNNNAGG 1 cut(s) 1490
BstF5I GGATG 9 cut(s) 685, 1482, 1501, 1555, 1657, 1978, 2060, 2461, 2722
BstFNI CGCG 1 cut(s) 77
BstH2I RGCGCY 4 cut(s) 72, 285, 314, 720
BstHHI GCGC 5 cut(s) 71, 79, 284, 313, 719
BstMAI GTCTC 4 cut(s) 241, 932, 1204, 2804
BstNI CCWGG 3 cut(s) 832, 991, 2851
BstPAI GACNNNNGTC 2 cut(s) 233, 2439
BstPI GGTNACC 1 cut(s) 876
BstSFI CTRYAG 3 cut(s) 314, 1674, 2754
BstSLI GKGCMC 2 cut(s) 52, 432
BstSNI TACGTA 2 cut(s) 2035, 2561
BstUI CGCG 1 cut(s) 77
BstV2I GAAGAC 6 cut(s) 992, 1314, 2015, 2334, 2419, 2972
BstX2I RGATCY 7 cut(s) 115, 186, 474, 1147, 1164, 1693, 2695
BstXI CCANNNNNNTGG 1 cut(s) 2132
BstYI RGATCY 7 cut(s) 115, 186, 474, 1147, 1164, 1693, 2695
BsuI GTATCC 1 cut(s) 2208
BtgI CCRYGG 2 cut(s) 105, 111
BtrI CACGTC 1 cut(s) 2819
BtsCI GGATG 9 cut(s) 685, 1482, 1501, 1555, 1657, 1978, 2060, 2461, 2722
BtsI GCAGTG 2 cut(s) 1398, 2891
BtsIMutI CAGTG 7 cut(s) 26, 578, 862, 1398, 1735, 2550, 2891
BveI ACCTGC 1 cut(s) 787
CciI TCATGA 1 cut(s) 1225
CfoI GCGC 5 cut(s) 71, 79, 284, 313, 719
Cfr10I RCCGGY 5 cut(s) 62, 215, 307, 1067, 1568
Cfr9I CCCGGG 1 cut(s) 407
CsiI ACCWGGT 1 cut(s) 989
Csp6I GTAC 5 cut(s) 1156, 1658, 2558, 2562, 2768
CspCI CAANNNNNGTGG 4 cut(s) 1010, 1045, 1853, 1888
CviAII CATG 9 cut(s) 106, 746, 793, 1226, 1258, 1592, 2321, 2432, 2549
CviQI GTAC 5 cut(s) 1156, 1658, 2558, 2562, 2768
DinI GGCGCC 1 cut(s) 283
DrdI GACNNNNNNGTC 2 cut(s) 509, 2830
DriI GACNNNNNGTC 1 cut(s) 2683
DseDI GACNNNNNNGTC 2 cut(s) 509, 2830
EaeI YGGCCR 3 cut(s) 108, 1069, 1479
Eam1104I CTCTTC 7 cut(s) 35, 244, 395, 1202, 1593, 2162, 2848
Eam1105I GACNNNNNGTC 1 cut(s) 2683
EarI CTCTTC 7 cut(s) 35, 244, 395, 1202, 1593, 2162, 2848
EciI GGCGGA 1 cut(s) 322
Ecl136II GAGCTC 4 cut(s) 22, 166, 521, 2362
Eco105I TACGTA 2 cut(s) 2035, 2561
Eco130I CCWWGG 3 cut(s) 105, 2125, 2826
Eco24I GRGCYC 7 cut(s) 24, 52, 168, 407, 432, 523, 2364
Eco47I GGWCC 4 cut(s) 411, 417, 1084, 2853
Eco47III AGCGCT 1 cut(s) 718
Eco53kI GAGCTC 4 cut(s) 22, 166, 521, 2362
Eco57I CTGAAG 2 cut(s) 513, 1800
Eco88I CYCGRG 2 cut(s) 407, 1151
Eco91I GGTNACC 1 cut(s) 876
EcoICRI GAGCTC 4 cut(s) 22, 166, 521, 2362
EcoNI CCTNNNNNAGG 1 cut(s) 1490
EcoO109I RGGNCCY 4 cut(s) 48, 428, 762, 2630
EcoO65I GGTNACC 1 cut(s) 876
EcoRI GAATTC 1 cut(s) 2305
EcoRII CCWGG 3 cut(s) 830, 989, 2849
EcoT14I CCWWGG 3 cut(s) 105, 2125, 2826
EcoT22I ATGCAT 1 cut(s) 1980
EcoT38I GRGCYC 7 cut(s) 24, 52, 168, 407, 432, 523, 2364
EgeI GGCGCC 1 cut(s) 283
EheI GGCGCC 1 cut(s) 283
ErhI CCWWGG 3 cut(s) 105, 2125, 2826
Esp3I CGTCTC 1 cut(s) 241
FaeI CATG 9 cut(s) 109, 749, 796, 1229, 1261, 1595, 2324, 2435, 2552
FaqI GGGAC 4 cut(s) 109, 560, 844, 2671
FatI CATG 9 cut(s) 105, 745, 792, 1225, 1257, 1591, 2320, 2431, 2548
FauI CCCGC 3 cut(s) 82, 438, 630
FauNDI CATATG 1 cut(s) 2836
FblI GTMKAC 1 cut(s) 676
FokI GGATG 9 cut(s) 672, 1469, 1508, 1542, 1664, 1965, 2067, 2468, 2729
FriOI GRGCYC 7 cut(s) 24, 52, 168, 407, 432, 523, 2364
FspBI CTAG 5 cut(s) 701, 1112, 1217, 1301, 2487
GlaI GCGC 5 cut(s) 70, 78, 283, 312, 718
GsaI CCCAGC 1 cut(s) 151
GsuI CTGGAG 4 cut(s) 490, 602, 1706, 2534
HaeII RGCGCY 4 cut(s) 72, 285, 314, 720
HhaI GCGC 5 cut(s) 71, 79, 284, 313, 719
Hin1I GRCGYC 1 cut(s) 282
Hin1II CATG 9 cut(s) 109, 749, 796, 1229, 1261, 1595, 2324, 2435, 2552
Hin6I GCGC 5 cut(s) 69, 77, 282, 311, 717
HinP1I GCGC 5 cut(s) 69, 77, 282, 311, 717
HincII GTYRAC 2 cut(s) 1351, 1644
HindII GTYRAC 2 cut(s) 1351, 1644
HphI GGTGA 4 cut(s) 145, 166, 319, 1514
Hpy166II GTNNAC 9 cut(s) 677, 961, 1351, 1644, 1726, 1828, 2564, 2748, 2768
Hpy8I GTNNAC 9 cut(s) 677, 961, 1351, 1644, 1726, 1828, 2564, 2748, 2768
Hpy99I CGWCG 1 cut(s) 197
HpyAV CCTTC 5 cut(s) 349, 1417, 1478, 2647, 2736
HpyCH4IV ACGT 8 cut(s) 857, 1037, 1353, 2034, 2065, 2445, 2560, 2818
HpySE526I ACGT 8 cut(s) 857, 1037, 1353, 2034, 2065, 2445, 2560, 2818
Hsp92I GRCGYC 1 cut(s) 282
Hsp92II CATG 9 cut(s) 109, 749, 796, 1229, 1261, 1595, 2324, 2435, 2552
HspAI GCGC 5 cut(s) 69, 77, 282, 311, 717
KasI GGCGCC 1 cut(s) 281
Kpn2I TCCGGA 1 cut(s) 2256
KroI GCCGGC 1 cut(s) 307
KroNI GCCGGC 1 cut(s) 309
LguI GCTCTTC 2 cut(s) 395, 2848
LweI GCATC 9 cut(s) 694, 1005, 1120, 1454, 1564, 1642, 1752, 1987, 2093
MabI ACCWGGT 1 cut(s) 989
MaeI CTAG 5 cut(s) 701, 1112, 1217, 1301, 2487
MaeII ACGT 8 cut(s) 857, 1037, 1353, 2034, 2065, 2445, 2560, 2818
MaeIII GTNAC 7 cut(s) 588, 814, 876, 2035, 2290, 2441, 2821
MfeI CAATTG 1 cut(s) 1788
MflI RGATCY 7 cut(s) 115, 186, 474, 1147, 1164, 1693, 2695
MhlI GDGCHC 8 cut(s) 24, 52, 168, 407, 432, 523, 1704, 2364
MlsI TGGCCA 2 cut(s) 110, 1481
MluNI TGGCCA 2 cut(s) 110, 1481
Mly113I GGCGCC 1 cut(s) 282
MmeI TCCRAC 4 cut(s) 276, 735, 2449, 2918
Mox20I TGGCCA 2 cut(s) 110, 1481
Mph1103I ATGCAT 1 cut(s) 1980
MreI CGCCGGCG 1 cut(s) 307
MroI TCCGGA 1 cut(s) 2256
MroNI GCCGGC 1 cut(s) 307
MroXI GAANNNNTTC 1 cut(s) 906
MscI TGGCCA 2 cut(s) 110, 1481
Msp20I TGGCCA 2 cut(s) 110, 1481
MspA1I CMGCKG 3 cut(s) 539, 727, 1963
MspCI CTTAAG 2 cut(s) 656, 2960
MunI CAATTG 1 cut(s) 1788
Mva1269I GAATGC 1 cut(s) 1952
MvaI CCWGG 3 cut(s) 832, 991, 2851
MvnI CGCG 1 cut(s) 77
NaeI GCCGGC 1 cut(s) 309
NarI GGCGCC 1 cut(s) 282
NciI CCSGG 9 cut(s) 378, 391, 408, 409, 415, 421, 432, 2650, 2881
NcoI CCATGG 1 cut(s) 105
NdeI CATATG 1 cut(s) 2836
NgoMIV GCCGGC 1 cut(s) 307
NheI GCTAGC 1 cut(s) 1111
NlaIII CATG 9 cut(s) 109, 749, 796, 1229, 1261, 1595, 2324, 2435, 2552
NmeAIII GCCGAG 2 cut(s) 122, 1141
NmuCI GTSAC 2 cut(s) 2441, 2821
NsiI ATGCAT 1 cut(s) 1980
NspV TTCGAA 2 cut(s) 38, 2336
PagI TCATGA 1 cut(s) 1225
PciSI GCTCTTC 2 cut(s) 395, 2848
PcsI WCGNNNNNNNCGW 4 cut(s) 89, 119, 189, 2815
PctI GAATGC 1 cut(s) 1952
PdiI GCCGGC 1 cut(s) 309
PdmI GAANNNNTTC 1 cut(s) 906
PflFI GACNNNGTC 1 cut(s) 991
PfoI TCCNGGA 1 cut(s) 2648
PluTI GGCGCC 1 cut(s) 285
Ppu21I YACGTR 4 cut(s) 1038, 2035, 2066, 2561
PshAI GACNNNNGTC 2 cut(s) 233, 2439
PsiI TTATAA 2 cut(s) 2418, 2973
Psp124BI GAGCTC 4 cut(s) 24, 168, 523, 2364
Psp6I CCWGG 3 cut(s) 830, 989, 2849
PspEI GGTNACC 1 cut(s) 876
PspFI CCCAGC 1 cut(s) 147
PspGI CCWGG 3 cut(s) 830, 989, 2849
PspOMI GGGCCC 2 cut(s) 48, 428
PstI CTGCAG 2 cut(s) 318, 1678
PsuI RGATCY 7 cut(s) 115, 186, 474, 1147, 1164, 1693, 2695
PsyI GACNNNGTC 1 cut(s) 991
PvuII CAGCTG 2 cut(s) 539, 1963
RsaI GTAC 5 cut(s) 1157, 1659, 2559, 2563, 2769
RsaNI GTAC 5 cut(s) 1156, 1658, 2558, 2562, 2768
SacI GAGCTC 4 cut(s) 24, 168, 523, 2364
SapI GCTCTTC 2 cut(s) 395, 2848
ScaI AGTACT 1 cut(s) 1157
SduI GDGCHC 8 cut(s) 24, 52, 168, 407, 432, 523, 1704, 2364
SexAI ACCWGGT 1 cut(s) 989
SfaNI GCATC 9 cut(s) 694, 1005, 1120, 1454, 1564, 1642, 1752, 1987, 2093
SfcI CTRYAG 3 cut(s) 314, 1674, 2754
SfoI GGCGCC 1 cut(s) 283
SfuI TTCGAA 2 cut(s) 38, 2336
SgrAI CRCCGGYG 1 cut(s) 307
SinI GGWCC 4 cut(s) 411, 417, 1084, 2853
SmaI CCCGGG 1 cut(s) 409
SmlI CTYRAG 5 cut(s) 599, 656, 665, 1168, 2960
SmoI CTYRAG 5 cut(s) 599, 656, 665, 1168, 2960
SnaBI TACGTA 2 cut(s) 2035, 2561
SspDI GGCGCC 1 cut(s) 281
SspI AATATT 3 cut(s) 1191, 1249, 2030
SspMI CTAG 5 cut(s) 701, 1112, 1217, 1301, 2487
SstI GAGCTC 4 cut(s) 24, 168, 523, 2364
StyI CCWWGG 3 cut(s) 105, 2125, 2826
TaiI ACGT 8 cut(s) 860, 1040, 1356, 2037, 2068, 2448, 2563, 2821
TaqI TCGA 5 cut(s) 38, 395, 1175, 1935, 2336
TatI WGTACW 3 cut(s) 1155, 1657, 2767
TauI GCSGC 8 cut(s) 200, 207, 287, 338, 341, 700, 730, 2375
TscAI CASTG 7 cut(s) 33, 585, 869, 1405, 1735, 2550, 2891
TseFI GTSAC 2 cut(s) 2441, 2821
Tsp45I GTSAC 2 cut(s) 2441, 2821
TspGWI ACGGA 3 cut(s) 128, 2299, 2906
TspMI CCCGGG 1 cut(s) 407
TspRI CASTG 7 cut(s) 33, 585, 869, 1405, 1735, 2550, 2891
Tth111I GACNNNGTC 1 cut(s) 991
Vha464I CTTAAG 2 cut(s) 656, 2960
VpaK11BI GGWCC 4 cut(s) 411, 417, 1084, 2853
XagI CCTNNNNNAGG 1 cut(s) 1490
XapI RAATTY 3 cut(s) 531, 1929, 2305
XbaI TCTAGA 1 cut(s) 2486
XcmI CCANNNNNNNNNTGG 3 cut(s) 869, 1273, 2107
XmaI CCCGGG 1 cut(s) 407
XmiI GTMKAC 1 cut(s) 676
XmnI GAANNNNTTC 1 cut(s) 906
XspI CTAG 5 cut(s) 701, 1112, 1217, 1301, 2487
ZrmI AGTACT 1 cut(s) 1157
Zsp2I ATGCAT 1 cut(s) 1980
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.