FvH4_2g35590

Plant family of unknown function (DUF810)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0013421
Physical Location & Seq
Reverse (-)
26244429 .. 26249707
5279 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g35590.t1

Sequence Viewer

Length: 2970 bp
ATGGCTCATCTTTTCAGAGAGCTCTCACTGGGCCATTCGAAGAGAGGGTCCCACTCCAACGGCGCCACCGCACTGACGATACCTCCCAAGCCAACCGCCACCACGGCCGCCGATCTCCCGTCCCCATTGGGCCAGCTCTCGGCTCACCTCACCGATTCGGAGCTCCGGCTCACCGCCTACGAGATCTTCGTCGCCGCCTGCCGCACCTCCACCGGGAAAGCCCTCACGTTCGTCTCGTCCGACTCGCCGACTCAGCAGCACAGCGCCGCCGGCTCGCCCGGCTCGCCGGCGCTGCAGAGATCGCTCACTTCCGCGGCGGCGAGTAAGATGAAGAAGGCATTGGGGCTTAAATCGCCGGGAAGTTCCGGGTCGAAGAAGAGCCCCGGGTCCGGGTCCGGGTCGGGGCCCGGGAAGTCCAAGCGGGCTATGACGGTGGGGGAGCTGATGAGGATCCAAATGGGGATTTCTGAGGCTATGGACTCCAGAGTCAGGAGAGCTCTGCTTCGAATTTCAGCTGGACAGGTAGGAAGGCGAATTGAGTCGGTGGTAGTCCCACTGGAGCTGTTACAGCAGCTCAAGTCGTCTGATTTTACTGACCCGCAAGAACACGAAGAATGGCAGAAGAGAACCCTCAAAATTCTTGAGGCTGGTCTGCTTTTGCATCCCTATGTGCCGCTGGACAAGTCCAATAGCGCTGCACAGCGGCTACGACAGATTATACATGGAGCATTGGATAGGCCATTTGAGACGGGGAGAAATAATGAGTCCATGCAGGTTCTTCGTAGTGCTGTTACGGCTCTTGCTTCGAGGTCATCTGATGGCGTTTATGATACGTCCCACTGGGCTGATGGGTTACCATTGAATCTCCGCATTTATGAAATGCTGCTCCAAGCTGTGTTTGATACTCAGGATGAGACATCTGTAATAGAGGAAGTGGACGAGCTAATGGAGCATATTAAGAAGACCTGGTCAATCCTTGGACTTAACCAGATGTTCCACAACCTTTGCTTTACCTGGGTTTTGTTTAACCGTTTTGTTGCTACTGGTCAAGTTGAATTGGACCTGTTGTATGCTGCTGATACGCAGCTAGCCGAGGTTGCTAAAGATGCAAAGGCAACAAAGGATCCCCAGTACTGCAAGATCTTGAGTTCGACTTTGACTTCAATTATGGGTTGGGCAGAGAAGAGACTCCTAGCCTATCATGACACTTTTGATAGCAGTAATATTGATACCATGCAGGCCATTGTTTCTCTGGGAGTAGTAGCAGCTAAGATCCTAGTTGAAGACATATCAAATGAGTACCGCAGGAGGAGAAAAAATGAAGTTGACGTTGCTCGCAACAGGATTGACACTTACATTAGATCATCATTGCGAACTGCTTTTGCTCAGAGAATGGAGATGGCAGATTCTAGCCGGAGAGCATCAAGAAACCAGCCTAATCCCCTTCCTGTACTGGCCATCCTTGCAATGGATGTTGGTGAGCTGGCAATAAAAGAGAAGCAATTATTCAGTCCAATACTAAAGATATGGCACCCTTTTGCTGCCGGTGTGGCCGTGGCAACTCTTCATGCTTGCTATGCGAATGAAATTAAACAGTTCATCTCGGGTATAGCAGAGTTGACACCAGATGCTGTACAAGTTTTGAGAGCTGCAGATAAGCTGGAGAAAGATCTTGTGCTCATAGCAGTTGAGGATTCTGTGGACAGTGATGATGGTGGCAAGGCTATTATTCGTGAGATGCCTCCTTATGAGGCTGAAGCTGCAATTGCAAATCTGGTTAAAGTGTGGATCAAGACAAGAGTGGACAGACTTAAAGAATGGATTGATAGGAACCTGCAACAAGAGGAATGGAATCCCCCAGCAAATGAAGATGGATATGCTCCATCTGCTGTTGAAGTTTTGCGAACTTTTGATGAGACTCTGGTTGCATTCTTTCAGCTACCAATACCAATGCATCCTGCGTTGCTTCCTGATTTGATGGCTGGCCTTGATAGATGTCTTCAATATTATGTAACCAAGGCAAAATCTGGATGTGGATCACGTAATACATTTGTTCCGACTATGCCTGCATTAACCAGATGCACTATGGAATCAAAGTTCCAAGGCTTTGGCAAAAAGAAAGAAAAATCGCCAACTTCTCAGAAGAGGAATTCTCAGGTTGCAACAGTCAATGGGGATAACTCTTTTGGGATACCACAGTTGCTTTGTCGCATAAACACATTGCAAAGAATCCGCAGTGAGTTAGAAGTTTTGGAGAAACGGATTGTTACTCATCTGAGAAATTCTGAATCTGCTCATGTAGAAGACTTTTCGAATGGACCGGGGAAGAAGTTTGAGCTCTCACCTGGGGCTTGTGTGGAGGTAATCACACAACTTTGTGAGGCAGTAGCTTATAAAATGGTCTTCCATGACCTCAGTCATGTTCTGTGGGATGGTTTGTATGTTGGAGAACCATCATCTTCTAGAATAGAGCCTTTCCTTGACGAGCTGGAAAAGAACCTACTTATCATATCAAACACAGTACATGAAAGAGTACGTACACGCATTATTACTGACATAATGAGAGCTTCCTTTGATGGGTTCTTGCTGGTTTTGCTTGCCGGAGGCCCGTCTCGTGTATTCTCCCGGAAGGATTCTCAAATAATAGAAGACGACTTCAAGTCGCTTAAAGATCTGTTCTGGGCAAATGGGGATGGCTTGCCTTCTGAATTGATAGATAAGTATACAACTACAGTGAGAGGTGTACTTCCCCTTTTCAGAACTGATACTGAGAGCCTCATTGAACGGTTTAGACGTGTGACCTTGGAGTCATATGGCTCTTCTGCCAGGTCCAGACTCCCTTTACCCCCTACTTCTGGGCAGTGGAATCCGACTGAACCAAACACGCTCCTCCGTGTGTTGTGCTATAGAAATGATGAAGCAGCTTCTAAGTTTCTTAAGAAGACCTACAATTTGCCCAAGAAACTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF810

Protein Analysis

990

Amino Acids

109.77

Weight (kDa)

8.4

Isoelectric Point (pI)

47.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPR_PATROL1 PF25761 589 - 988 5.3e-174 PATROL1-like, TPR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0013421)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G25800
fragaria_vesca FvH4_2g35590 FvH4_2g35590
malus_domestica MD08G1113600.v1.1 MD15G1093300.v1.1
prunus_persica Prupe.1G448100_v2.0.a1
pyrus_communis pycom08g09420 pycom15g08610
rosa_chinensis RchiOBHm_Chr6g0306221
rosa_laevigata RLG00000010812
rosa_multiflora Rmu_sc0003594.1_g000002
rosa_roxburghii Rroxscaffold_7G00161920
rosa_rugosa Rorug06G0348100
rosa_samantha Rh6AG460700 Rh6BG440700 Rh6CG474700 Rh6DG461000
rosa_wichuraiana Rw6G040130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2394
AasI GACNNNNNNGTC 2 cut(s) 485, 2806
Acc36I ACCTGC 2 cut(s) 763, 1842
AccB1I GGYRCC 2 cut(s) 62, 1530
AccI GTMKAC 1 cut(s) 2723
AccII CGCG 1 cut(s) 314
AclWI GGATC 7 cut(s) 445, 458, 1118, 1131, 1267, 1796, 2044
AcoI YGGCCR 3 cut(s) 105, 1455, 1551
AcsI RAATTY 4 cut(s) 507, 636, 2149, 2281
AcuI CTGAAG 1 cut(s) 1776
AcyI GRCGYC 1 cut(s) 63
AfaI GTAC 8 cut(s) 1133, 1301, 1452, 1635, 2523, 2535, 2539, 2745
AfeI AGCGCT 1 cut(s) 694
AflII CTTAAG 1 cut(s) 2936
AflIII ACRYGT 1 cut(s) 2794
AgsI TTSAA 8 cut(s) 862, 1055, 1164, 1283, 1895, 2003, 2659, 2783
AhdI GACNNNNNGTC 1 cut(s) 2659
AjiI CACGTC 1 cut(s) 2795
AjnI CCWGG 4 cut(s) 965, 1013, 2344, 2825
AjuI GAANNNNNNNTTGG 2 cut(s) 323, 355
AloI GAACNNNNNNTCC 2 cut(s) 2081, 2113
Alw21I GWGCWC 5 cut(s) 24, 165, 499, 1680, 2340
Alw26I GTCTC 6 cut(s) 238, 740, 908, 1180, 1910, 2616
AlwI GGATC 7 cut(s) 445, 458, 1118, 1131, 1267, 1796, 2044
AlwNI CAGNNNCTG 1 cut(s) 1631
Ama87I CYCGRG 3 cut(s) 383, 407, 1603
Aor51HI AGCGCT 1 cut(s) 694
ApaI GGGCCC 1 cut(s) 408
ApoI RAATTY 4 cut(s) 507, 636, 2149, 2281
ArsI GACNNNNNNTTYG 4 cut(s) 32, 64, 2935, 2967
AspLEI GCGC 4 cut(s) 65, 266, 292, 695
AsuHPI GGTGA 5 cut(s) 137, 142, 163, 1490, 2334
AsuII TTCGAA 3 cut(s) 38, 505, 2312
AsuNHI GCTAGC 1 cut(s) 1087
AvaI CYCGRG 3 cut(s) 383, 407, 1603
AvaII GGWCC 6 cut(s) 48, 387, 393, 1060, 2318, 2829
BaeGI GKGCMC 1 cut(s) 408
BaeI ACNNNNGTAYC 2 cut(s) 2183, 2216
BalI TGGCCA 1 cut(s) 1457
BamHI GGATCC 2 cut(s) 450, 1123
BanI GGYRCC 2 cut(s) 62, 1530
BanII GRGCYC 6 cut(s) 24, 165, 383, 408, 499, 2340
BauI CACGAG 1 cut(s) 2613
BbsI GAAGAC 7 cut(s) 968, 1290, 1991, 2310, 2395, 2655, 2948
Bbv12I GWGCWC 5 cut(s) 24, 165, 499, 1680, 2340
BceAI ACGGC 4 cut(s) 76, 120, 810, 1538
BcgI CGANNNNNNTGC 2 cut(s) 761, 795
BciT130I CCWGG 4 cut(s) 967, 1015, 2346, 2827
BciVI GTATCC 1 cut(s) 2184
BcoDI GTCTC 6 cut(s) 238, 740, 908, 1180, 1910, 2616
BfaI CTAG 5 cut(s) 1088, 1193, 1277, 1410, 2463
BfmI CTRYAG 4 cut(s) 293, 1650, 2730, 2905
BfoI RGCGCY 4 cut(s) 66, 267, 293, 696
BfrI CTTAAG 1 cut(s) 2936
BfuAI ACCTGC 2 cut(s) 763, 1842
BfuI GTATCC 1 cut(s) 2184
BglI GCCNNNNNGGC 2 cut(s) 104, 1550
BglII AGATCT 4 cut(s) 183, 1140, 1669, 2671
BmcAI AGTACT 1 cut(s) 1133
Bme18I GGWCC 6 cut(s) 48, 387, 393, 1060, 2318, 2829
BmeRI GACNNNNNGTC 1 cut(s) 2659
BmeT110I CYCGRG 3 cut(s) 383, 407, 1603
BmgBI CACGTC 1 cut(s) 2795
BmrI ACTGGG 3 cut(s) 38, 850, 1123
BmsI GCATC 7 cut(s) 670, 1096, 1430, 1618, 1728, 1963, 2069
BmtI GCTAGC 1 cut(s) 1091
BmuI ACTGGG 3 cut(s) 38, 850, 1123
BoxI GACNNNNGTC 1 cut(s) 2415
BpiI GAAGAC 7 cut(s) 968, 1290, 1991, 2310, 2395, 2655, 2948
BplI GAGNNNNNCTC 2 cut(s) 2137, 2169
BpmI CTGGAG 3 cut(s) 466, 578, 1682
Bpu14I TTCGAA 3 cut(s) 38, 505, 2312
BpuEI CTTGAG 3 cut(s) 560, 662, 1165
BsaAI YACGTR 2 cut(s) 2042, 2537
BsaBI GATNNNNATC 2 cut(s) 449, 2035
BsaHI GRCGYC 1 cut(s) 63
BsaXI ACNNNNNCTCC 2 cut(s) 67, 97
Bse118I RCCGGY 3 cut(s) 269, 286, 1544
Bse1I ACTGG 6 cut(s) 33, 561, 845, 1048, 1129, 1458
Bse3DI GCAATG 3 cut(s) 1367, 1473, 2219
Bse8I GATNNNNATC 2 cut(s) 449, 2035
BseBI CCWGG 4 cut(s) 967, 1015, 2346, 2827
BseGI GGATG 8 cut(s) 661, 916, 1458, 1477, 1954, 2036, 2437, 2698
BseJI GATNNNNATC 2 cut(s) 449, 2035
BseMI GCAATG 3 cut(s) 1367, 1473, 2219
BseMII CTCAG 9 cut(s) 266, 459, 920, 1400, 2153, 2168, 2267, 2428, 2760
BseNI ACTGG 6 cut(s) 33, 561, 845, 1048, 1129, 1458
BseRI GAGGAG 2 cut(s) 1324, 2879
BseSI GKGCMC 1 cut(s) 408
BseX3I CGGCCG 1 cut(s) 105
BseYI CCCAGC 1 cut(s) 1858
BsgI GTGCAG 1 cut(s) 681
Bsh1236I CGCG 1 cut(s) 314
Bsh1285I CGRYCG 1 cut(s) 108
BshNI GGYRCC 2 cut(s) 62, 1530
BsiEI CGRYCG 1 cut(s) 108
BsiHKAI GWGCWC 5 cut(s) 24, 165, 499, 1680, 2340
BsiHKCI CYCGRG 3 cut(s) 383, 407, 1603
BslFI GGGAC 4 cut(s) 34, 106, 536, 820
BsmAI GTCTC 6 cut(s) 238, 740, 908, 1180, 1910, 2616
BsmBI CGTCTC 3 cut(s) 238, 740, 2616
BsmFI GGGAC 4 cut(s) 34, 106, 536, 820
BsmI GAATGC 1 cut(s) 1928
BsoBI CYCGRG 3 cut(s) 383, 407, 1603
Bsp119I TTCGAA 3 cut(s) 38, 505, 2312
Bsp120I GGGCCC 1 cut(s) 404
Bsp1286I GDGCHC 7 cut(s) 24, 165, 383, 408, 499, 1680, 2340
Bsp1407I TGTACA 1 cut(s) 1633
BspCNI CTCAG 9 cut(s) 265, 460, 919, 1399, 2152, 2167, 2268, 2427, 2761
BspFNI CGCG 1 cut(s) 314
BspHI TCATGA 1 cut(s) 1201
BspMAI CTGCAG 2 cut(s) 297, 1654
BspMI ACCTGC 2 cut(s) 763, 1842
BspOI GCTAGC 1 cut(s) 1091
BspPI GGATC 7 cut(s) 445, 458, 1118, 1131, 1267, 1796, 2044
BspQI GCTCTTC 2 cut(s) 371, 2824
BspT104I TTCGAA 3 cut(s) 38, 505, 2312
BspT107I GGYRCC 2 cut(s) 62, 1530
BspTI CTTAAG 1 cut(s) 2936
BsrDI GCAATG 3 cut(s) 1367, 1473, 2219
BsrFI RCCGGY 3 cut(s) 269, 286, 1544
BsrGI TGTACA 1 cut(s) 1633
BsrI ACTGG 6 cut(s) 33, 561, 845, 1048, 1129, 1458
BssAI RCCGGY 3 cut(s) 269, 286, 1544
BssNAI GTATAC 1 cut(s) 2724
BssNI GRCGYC 1 cut(s) 63
BssSI CACGAG 1 cut(s) 2613
BssT1I CCWWGG 4 cut(s) 976, 2016, 2101, 2802
Bst1107I GTATAC 1 cut(s) 2724
Bst2BI CACGAG 1 cut(s) 2613
Bst2UI CCWGG 4 cut(s) 967, 1015, 2346, 2827
Bst6I CTCTTC 7 cut(s) 35, 371, 617, 1178, 1569, 2138, 2824
BstACI GRCGYC 1 cut(s) 63
BstAFI CTTAAG 1 cut(s) 2936
BstAUI TGTACA 1 cut(s) 1633
BstBAI YACGTR 2 cut(s) 2042, 2537
BstBI TTCGAA 3 cut(s) 38, 505, 2312
BstDSI CCRYGG 3 cut(s) 102, 312, 1554
BstEII GGTNACC 1 cut(s) 852
BstF5I GGATG 8 cut(s) 661, 916, 1458, 1477, 1954, 2036, 2437, 2698
BstFNI CGCG 1 cut(s) 314
BstH2I RGCGCY 4 cut(s) 66, 267, 293, 696
BstHHI GCGC 4 cut(s) 65, 266, 292, 695
BstMAI GTCTC 6 cut(s) 238, 740, 908, 1180, 1910, 2616
BstMCI CGRYCG 1 cut(s) 108
BstNI CCWGG 4 cut(s) 967, 1015, 2346, 2827
BstPAI GACNNNNGTC 1 cut(s) 2415
BstPI GGTNACC 1 cut(s) 852
BstSFI CTRYAG 4 cut(s) 293, 1650, 2730, 2905
BstSLI GKGCMC 1 cut(s) 408
BstSNI TACGTA 1 cut(s) 2537
BstUI CGCG 1 cut(s) 314
BstV2I GAAGAC 7 cut(s) 968, 1290, 1991, 2310, 2395, 2655, 2948
BstX2I RGATCY 7 cut(s) 183, 450, 1123, 1140, 1272, 1669, 2671
BstXI CCANNNNNNTGG 1 cut(s) 2108
BstYI RGATCY 7 cut(s) 183, 450, 1123, 1140, 1272, 1669, 2671
BstZ17I GTATAC 1 cut(s) 2724
BstZI CGGCCG 1 cut(s) 105
BsuI GTATCC 1 cut(s) 2184
BtgI CCRYGG 3 cut(s) 102, 312, 1554
BtrI CACGTC 1 cut(s) 2795
BtsCI GGATG 8 cut(s) 661, 916, 1458, 1477, 1954, 2036, 2437, 2698
BtsI GCAGTG 2 cut(s) 2242, 2867
BtsIMutI CAGTG 8 cut(s) 26, 71, 554, 838, 1711, 2242, 2739, 2867
BveI ACCTGC 2 cut(s) 763, 1842
CaiI CAGNNNCTG 1 cut(s) 1631
CciI TCATGA 1 cut(s) 1201
CfoI GCGC 4 cut(s) 65, 266, 292, 695
Cfr10I RCCGGY 3 cut(s) 269, 286, 1544
Cfr42I CCGCGG 1 cut(s) 315
Cfr9I CCCGGG 2 cut(s) 383, 407
CsiI ACCWGGT 1 cut(s) 965
Csp6I GTAC 8 cut(s) 1132, 1300, 1451, 1634, 2522, 2534, 2538, 2744
CspCI CAANNNNNGTGG 2 cut(s) 986, 1021
CviAII CATG 9 cut(s) 722, 769, 1202, 1234, 1568, 2297, 2408, 2420, 2525
CviQI GTAC 8 cut(s) 1132, 1300, 1451, 1634, 2522, 2534, 2538, 2744
DinI GGCGCC 1 cut(s) 64
DrdI GACNNNNNNGTC 2 cut(s) 485, 2806
DriI GACNNNNNGTC 1 cut(s) 2659
DseDI GACNNNNNNGTC 2 cut(s) 485, 2806
EaeI YGGCCR 3 cut(s) 105, 1455, 1551
EagI CGGCCG 1 cut(s) 105
Eam1104I CTCTTC 7 cut(s) 35, 371, 617, 1178, 1569, 2138, 2824
Eam1105I GACNNNNNGTC 1 cut(s) 2659
EarI CTCTTC 7 cut(s) 35, 371, 617, 1178, 1569, 2138, 2824
Ecl136II GAGCTC 4 cut(s) 22, 163, 497, 2338
EclXI CGGCCG 1 cut(s) 105
Eco105I TACGTA 1 cut(s) 2537
Eco130I CCWWGG 4 cut(s) 976, 2016, 2101, 2802
Eco24I GRGCYC 6 cut(s) 24, 165, 383, 408, 499, 2340
Eco47I GGWCC 6 cut(s) 48, 387, 393, 1060, 2318, 2829
Eco47III AGCGCT 1 cut(s) 694
Eco52I CGGCCG 1 cut(s) 105
Eco53kI GAGCTC 4 cut(s) 22, 163, 497, 2338
Eco57I CTGAAG 1 cut(s) 1776
Eco88I CYCGRG 3 cut(s) 383, 407, 1603
Eco91I GGTNACC 1 cut(s) 852
EcoICRI GAGCTC 4 cut(s) 22, 163, 497, 2338
EcoO109I RGGNCCY 2 cut(s) 48, 404
EcoO65I GGTNACC 1 cut(s) 852
EcoRI GAATTC 1 cut(s) 2149
EcoRII CCWGG 4 cut(s) 965, 1013, 2344, 2825
EcoT14I CCWWGG 4 cut(s) 976, 2016, 2101, 2802
EcoT22I ATGCAT 1 cut(s) 1956
EcoT38I GRGCYC 6 cut(s) 24, 165, 383, 408, 499, 2340
EgeI GGCGCC 1 cut(s) 64
EheI GGCGCC 1 cut(s) 64
ErhI CCWWGG 4 cut(s) 976, 2016, 2101, 2802
Esp3I CGTCTC 3 cut(s) 238, 740, 2616
FaeI CATG 9 cut(s) 725, 772, 1205, 1237, 1571, 2300, 2411, 2423, 2528
FaqI GGGAC 4 cut(s) 34, 106, 536, 820
FatI CATG 9 cut(s) 721, 768, 1201, 1233, 1567, 2296, 2407, 2419, 2524
FauI CCCGC 2 cut(s) 414, 606
FauNDI CATATG 1 cut(s) 2812
FblI GTMKAC 1 cut(s) 2723
FokI GGATG 8 cut(s) 648, 923, 1445, 1484, 1941, 2043, 2444, 2705
FriOI GRGCYC 6 cut(s) 24, 165, 383, 408, 499, 2340
FspBI CTAG 5 cut(s) 1088, 1193, 1277, 1410, 2463
GlaI GCGC 4 cut(s) 64, 265, 291, 694
GsaI CCCAGC 1 cut(s) 1862
GsuI CTGGAG 3 cut(s) 466, 578, 1682
HaeII RGCGCY 4 cut(s) 66, 267, 293, 696
HhaI GCGC 4 cut(s) 65, 266, 292, 695
Hin1I GRCGYC 1 cut(s) 63
Hin1II CATG 9 cut(s) 725, 772, 1205, 1237, 1571, 2300, 2411, 2423, 2528
Hin6I GCGC 4 cut(s) 63, 264, 290, 693
HinP1I GCGC 4 cut(s) 63, 264, 290, 693
HincII GTYRAC 2 cut(s) 1327, 1620
HindII GTYRAC 2 cut(s) 1327, 1620
HphI GGTGA 5 cut(s) 137, 142, 163, 1490, 2334
Hpy166II GTNNAC 8 cut(s) 937, 1327, 1620, 1702, 1804, 2540, 2724, 2744
Hpy8I GTNNAC 8 cut(s) 937, 1327, 1620, 1702, 1804, 2540, 2724, 2744
Hpy99I CGWCG 1 cut(s) 194
HpyAV CCTTC 5 cut(s) 328, 522, 1454, 2623, 2712
HpyCH4IV ACGT 6 cut(s) 227, 833, 1329, 2041, 2536, 2794
HpySE526I ACGT 6 cut(s) 227, 833, 1329, 2041, 2536, 2794
Hsp92I GRCGYC 1 cut(s) 63
Hsp92II CATG 9 cut(s) 725, 772, 1205, 1237, 1571, 2300, 2411, 2423, 2528
HspAI GCGC 4 cut(s) 63, 264, 290, 693
KasI GGCGCC 1 cut(s) 62
KflI GGGWCCC 1 cut(s) 48
KroI GCCGGC 2 cut(s) 269, 286
KroNI GCCGGC 2 cut(s) 271, 288
KspI CCGCGG 1 cut(s) 315
LguI GCTCTTC 2 cut(s) 371, 2824
LmnI GCTCC 9 cut(s) 160, 168, 439, 559, 725, 891, 949, 1885, 2892
LweI GCATC 7 cut(s) 670, 1096, 1430, 1618, 1728, 1963, 2069
MabI ACCWGGT 1 cut(s) 965
MaeI CTAG 5 cut(s) 1088, 1193, 1277, 1410, 2463
MaeII ACGT 6 cut(s) 227, 833, 1329, 2041, 2536, 2794
MaeIII GTNAC 6 cut(s) 564, 790, 852, 2011, 2266, 2797
MfeI CAATTG 1 cut(s) 1764
MflI RGATCY 7 cut(s) 183, 450, 1123, 1140, 1272, 1669, 2671
MhlI GDGCHC 7 cut(s) 24, 165, 383, 408, 499, 1680, 2340
MlsI TGGCCA 1 cut(s) 1457
MluNI TGGCCA 1 cut(s) 1457
Mly113I GGCGCC 1 cut(s) 63
MmeI TCCRAC 5 cut(s) 81, 264, 2081, 2425, 2894
Mox20I TGGCCA 1 cut(s) 1457
Mph1103I ATGCAT 1 cut(s) 1956
MreI CGCCGGCG 1 cut(s) 286
MroNI GCCGGC 2 cut(s) 269, 286
MscI TGGCCA 1 cut(s) 1457
MslI CAYNNNNRTG 1 cut(s) 666
Msp20I TGGCCA 1 cut(s) 1457
MspA1I CMGCKG 4 cut(s) 314, 515, 676, 703
MspCI CTTAAG 1 cut(s) 2936
MunI CAATTG 1 cut(s) 1764
Mva1269I GAATGC 1 cut(s) 1928
MvaI CCWGG 4 cut(s) 967, 1015, 2346, 2827
MvnI CGCG 1 cut(s) 314
NaeI GCCGGC 2 cut(s) 271, 288
NarI GGCGCC 1 cut(s) 63
NdeI CATATG 1 cut(s) 2812
NgoMIV GCCGGC 2 cut(s) 269, 286
NheI GCTAGC 1 cut(s) 1087
NlaIII CATG 9 cut(s) 725, 772, 1205, 1237, 1571, 2300, 2411, 2423, 2528
NmeAIII GCCGAG 2 cut(s) 119, 1117
NmuCI GTSAC 1 cut(s) 2797
NsiI ATGCAT 1 cut(s) 1956
NspV TTCGAA 3 cut(s) 38, 505, 2312
PagI TCATGA 1 cut(s) 1201
PciSI GCTCTTC 2 cut(s) 371, 2824
PcsI WCGNNNNNNNCGW 4 cut(s) 186, 233, 237, 2791
PctI GAATGC 1 cut(s) 1928
PdiI GCCGGC 2 cut(s) 271, 288
PflFI GACNNNGTC 1 cut(s) 967
PfoI TCCNGGA 1 cut(s) 2624
PluTI GGCGCC 1 cut(s) 66
Ppu21I YACGTR 2 cut(s) 2042, 2537
PpuMI RGGWCCY 1 cut(s) 48
PshAI GACNNNNGTC 1 cut(s) 2415
PsiI TTATAA 1 cut(s) 2394
Psp124BI GAGCTC 4 cut(s) 24, 165, 499, 2340
Psp5II RGGWCCY 1 cut(s) 48
Psp6I CCWGG 4 cut(s) 965, 1013, 2344, 2825
PspEI GGTNACC 1 cut(s) 852
PspFI CCCAGC 1 cut(s) 1858
PspGI CCWGG 4 cut(s) 965, 1013, 2344, 2825
PspOMI GGGCCC 1 cut(s) 404
PspPPI RGGWCCY 1 cut(s) 48
PstI CTGCAG 2 cut(s) 297, 1654
PstNI CAGNNNCTG 1 cut(s) 1631
PsuI RGATCY 7 cut(s) 183, 450, 1123, 1140, 1272, 1669, 2671
PsyI GACNNNGTC 1 cut(s) 967
PvuII CAGCTG 1 cut(s) 515
RsaI GTAC 8 cut(s) 1133, 1301, 1452, 1635, 2523, 2535, 2539, 2745
RsaNI GTAC 8 cut(s) 1132, 1300, 1451, 1634, 2522, 2534, 2538, 2744
RseI CAYNNNNRTG 1 cut(s) 666
SacI GAGCTC 4 cut(s) 24, 165, 499, 2340
SacII CCGCGG 1 cut(s) 315
SapI GCTCTTC 2 cut(s) 371, 2824
ScaI AGTACT 1 cut(s) 1133
SduI GDGCHC 7 cut(s) 24, 165, 383, 408, 499, 1680, 2340
SexAI ACCWGGT 1 cut(s) 965
SfaNI GCATC 7 cut(s) 670, 1096, 1430, 1618, 1728, 1963, 2069
SfcI CTRYAG 4 cut(s) 293, 1650, 2730, 2905
SfoI GGCGCC 1 cut(s) 64
Sfr303I CCGCGG 1 cut(s) 315
SfuI TTCGAA 3 cut(s) 38, 505, 2312
SgrAI CRCCGGYG 1 cut(s) 286
SgrBI CCGCGG 1 cut(s) 315
SinI GGWCC 6 cut(s) 48, 387, 393, 1060, 2318, 2829
SmaI CCCGGG 2 cut(s) 385, 409
SmiMI CAYNNNNRTG 1 cut(s) 666
SmlI CTYRAG 4 cut(s) 575, 641, 1144, 2936
SmoI CTYRAG 4 cut(s) 575, 641, 1144, 2936
SnaBI TACGTA 1 cut(s) 2537
SspDI GGCGCC 1 cut(s) 62
SspI AATATT 2 cut(s) 1225, 2006
SspMI CTAG 5 cut(s) 1088, 1193, 1277, 1410, 2463
SstI GAGCTC 4 cut(s) 24, 165, 499, 2340
StyI CCWWGG 4 cut(s) 976, 2016, 2101, 2802
TaiI ACGT 6 cut(s) 230, 836, 1332, 2044, 2539, 2797
TaqI TCGA 6 cut(s) 38, 371, 505, 806, 1151, 2312
TatI WGTACW 5 cut(s) 1131, 1450, 1633, 2521, 2743
TauI GCSGC 8 cut(s) 110, 197, 204, 269, 317, 320, 676, 706
TscAI CASTG 8 cut(s) 33, 78, 561, 845, 1711, 2242, 2739, 2867
TseFI GTSAC 1 cut(s) 2797
Tsp45I GTSAC 1 cut(s) 2797
TspDTI ATGAA 9 cut(s) 344, 891, 1335, 1556, 1588, 1599, 1881, 2541, 2931
TspGWI ACGGA 2 cut(s) 2275, 2882
TspMI CCCGGG 2 cut(s) 383, 407
TspRI CASTG 8 cut(s) 33, 78, 561, 845, 1711, 2242, 2739, 2867
Tth111I GACNNNGTC 1 cut(s) 967
Vha464I CTTAAG 1 cut(s) 2936
VpaK11BI GGWCC 6 cut(s) 48, 387, 393, 1060, 2318, 2829
XapI RAATTY 4 cut(s) 507, 636, 2149, 2281
XbaI TCTAGA 1 cut(s) 2462
XcmI CCANNNNNNNNNTGG 4 cut(s) 845, 1249, 1465, 2083
XmaI CCCGGG 2 cut(s) 383, 407
XmiI GTMKAC 1 cut(s) 2723
XspI CTAG 5 cut(s) 1088, 1193, 1277, 1410, 2463
ZrmI AGTACT 1 cut(s) 1133
Zsp2I ATGCAT 1 cut(s) 1956
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.