Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0009291

Physical Location & Seq

Genomic Coordinates Forward (+)

11164575 .. 11167346

Gene Structure 2772 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G26230.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 930 bp

ATGGCACAAGAAGCCGATGGGATCAGATTGGACCAAAGACATGGGAAGGCTCGAGTGAGAGTTGGAAGAGTTTGGCGTCATGCTCATGATGGATCTCATCACTTTGTTGAATGGAATGTTAGCATCAGTCTTCTCTCTCACTGTCTCTCTTCTTACCGTCTTGATGATAACTCTGATATTGTCGCCACAGATACCATTAAAAACACTGTTTATGTGAAAGCCAAGGAATGTGGAGATCGGCTCTCGGTGGAGGAATTTGCCATACTTATTGGGAAACACTTTTGCTCATTTTATCCACAGGTATTTACTGCTATCGTGAATATCATTGAGAAGCCCTGGGAGCGTGTCTCCATCGATGGAAAACCACATTTACATGGTTTTAAGCTTGGGTCAGAGAACCATACTACAGAGGCAAGAGTAGAAAAGTCTGGTGCATTAAACTTAACTTCCGGTATTGGAGGACTAGCTCTACTGAAGACAACCCAGTCAGGATTTGAGAGGTTTGTCAGAGACAAATACACCATTCTGCCTGAAACTCGTGAGCGAATGCTGGCCACAGAGGTTAATGCATCTTGGAGGTACTCGTATGAGTCAGTTGCAAGCATTCCAACAAAAGGACTCTACTTTAGCGAGAAGTTCATGGACGTTAAGAAAGTTCTGATGGATACTTTCTTTGGTCCACCAGAAACTGGTGTGTATAGCCCTTCTGTCCAACGCACTCTCTACCTCATGGGAAGCGCCGTACTGAAAAGGTTCGCTGATGTATCATCGATTCACCTAAAAATGCCAAATATTCATTTTCTACCAGTAAATCTTTCAACGAAGGAAAACCCTTCAATGGTGAAGTTTAAAGATGATGTGTACCTGCCAACCGATGAACCTCATGGATCTATAGAAGCAACTCTAAGCCGTATAACCTCGAAACTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004846 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005777 GO:0006996 GO:0007031 GO:0008150 GO:0008152 GO:0009987 GO:0016043 GO:0016491 GO:0016661 GO:0016663 GO:0042579 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0055114 GO:0071840

KEGG Pathways

Metabolic & Signaling

ko00230 ko00232 ko01100 ko01120 map00230 map00232 map01100 map01120

Pfam Domains

Protein Families

Uricase

Protein Analysis

309

Amino Acids

34.88

Weight (kDa)

8.6

Isoelectric Point (pI)

28.99

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Uricase	PF01014	13 - 137	2.8e-20	Uricase
Uricase	PF01014	149 - 299	3.5e-40	Uricase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009291)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G26230
fragaria_vesca	FvH4_7g03231 FvH4_7g03231
malus_domestica	MD02G1258600.v1.1 MD07G1062200.v1.1
prunus_persica	Prupe.2G072000_v2.0.a1 Prupe.2G072000_v2.0.a1 Prupe.2G072000_v2.0.a1
pyrus_communis	pycom02g21980 pycom07g04770
rosa_chinensis	RchiOBHm_Chr1g0325281 RchiOBHm_Chr1g0325311
rosa_laevigata	RLG00000030147
rosa_multiflora	Rmu_sc0007742.1_g000034 Rmu_sc0020800.1_g000011
rosa_roxburghii	Rroxscaffold_4G00324830
rosa_rugosa	Rorug01G0051200
rosa_samantha	Rh1AG066400 Rh1BG054500 Rh1CG067800 Rh1DG072600
rosa_wichuraiana	Rw1G005550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	484
Acc36I	ACCTGC	1 cut(s)	873
AccB7I	CCANNNNNTGG	1 cut(s)	689
AclWI	GGATC	3 cut(s)	29, 100, 895
AcoI	YGGCCR	1 cut(s)	552
AcsI	RAATTY	1 cut(s)	254
AcuI	CTGAAG	1 cut(s)	494
AcyI	GRCGYC	1 cut(s)	76
AfaI	GTAC	3 cut(s)	581, 744, 863
AfiI	CCNNNNNNNGG	3 cut(s)	614, 689, 838
AgsI	TTSAA	3 cut(s)	110, 819, 837
AjnI	CCWGG	1 cut(s)	335
AluBI	AGCT	2 cut(s)	385, 467
AluI	AGCT	2 cut(s)	385, 467
Alw26I	GTCTC	3 cut(s)	149, 352, 504
AlwI	GGATC	3 cut(s)	29, 100, 895
AlwNI	CAGNNNCTG	1 cut(s)	689
Ama87I	CYCGRG	1 cut(s)	51
AoxI	GGCC	1 cut(s)	552
ApoI	RAATTY	1 cut(s)	254
Asp700I	GAANNNNTTC	1 cut(s)	752
AspLEI	GCGC	1 cut(s)	740
AspS9I	GGNCC	2 cut(s)	31, 677
AsuHPI	GGTGA	2 cut(s)	767, 853
AvaI	CYCGRG	1 cut(s)	51
AvaII	GGWCC	2 cut(s)	31, 677
BalI	TGGCCA	1 cut(s)	554
BauI	CACGAG	1 cut(s)	537
BbsI	GAAGAC	2 cut(s)	122, 482
BccI	CCATC	5 cut(s)	11, 83, 350, 359, 655
BceAI	ACGGC	2 cut(s)	725, 894
BciT130I	CCWGG	1 cut(s)	337
BciVI	GTATCC	1 cut(s)	658
BcoDI	GTCTC	3 cut(s)	149, 352, 504
BfaI	CTAG	1 cut(s)	464
BfmI	CTRYAG	2 cut(s)	405, 891
BfoI	RGCGCY	1 cut(s)	741
BfuAI	ACCTGC	1 cut(s)	873
BfuI	GTATCC	1 cut(s)	658
Bme1390I	CCNGG	1 cut(s)	337
Bme18I	GGWCC	2 cut(s)	31, 677
BmeT110I	CYCGRG	1 cut(s)	51
BmgT120I	GGNCC	2 cut(s)	31, 677
BmrFI	CCNGG	1 cut(s)	337
BmrI	ACTGGG	1 cut(s)	478
BmsI	GCATC	2 cut(s)	132, 578
BmuI	ACTGGG	1 cut(s)	478
BpiI	GAAGAC	2 cut(s)	122, 482
BplI	GAGNNNNNCTC	4 cut(s)	225, 257, 332, 364
Bsa29I	ATCGAT	2 cut(s)	354, 770
BsaHI	GRCGYC	1 cut(s)	76
BsaJI	CCNNGG	3 cut(s)	222, 335, 336
BsaWI	WCCGGW	1 cut(s)	449
Bsc4I	CCNNNNNNNGG	3 cut(s)	614, 689, 838
Bse1I	ACTGG	3 cut(s)	484, 694, 806
BseBI	CCWGG	1 cut(s)	337
BseCI	ATCGAT	2 cut(s)	354, 770
BseDI	CCNNGG	3 cut(s)	222, 335, 336
BseLI	CCNNNNNNNGG	3 cut(s)	614, 689, 838
BseNI	ACTGG	3 cut(s)	484, 694, 806
BshFI	GGCC	1 cut(s)	554
BshVI	ATCGAT	2 cut(s)	354, 770
BsiHKCI	CYCGRG	1 cut(s)	51
BsiSI	CCGG	1 cut(s)	450
BslI	CCNNNNNNNGG	3 cut(s)	614, 689, 838
BsmAI	GTCTC	3 cut(s)	149, 352, 504
BsmI	GAATGC	2 cut(s)	552, 603
BsnI	GGCC	1 cut(s)	554
BsoBI	CYCGRG	1 cut(s)	51
Bsp143I	GATC	4 cut(s)	21, 92, 235, 887
BspANI	GGCC	1 cut(s)	554
BspDI	ATCGAT	2 cut(s)	354, 770
BspHI	TCATGA	1 cut(s)	85
BspMI	ACCTGC	1 cut(s)	873
BspPI	GGATC	3 cut(s)	29, 100, 895
BsrI	ACTGG	3 cut(s)	484, 694, 806
BssECI	CCNNGG	3 cut(s)	222, 335, 336
BssMI	GATC	4 cut(s)	21, 92, 235, 887
BssNI	GRCGYC	1 cut(s)	76
BssSI	CACGAG	1 cut(s)	537
BssT1I	CCWWGG	1 cut(s)	222
Bst2BI	CACGAG	1 cut(s)	537
Bst2UI	CCWGG	1 cut(s)	337
Bst4CI	ACNGT	3 cut(s)	143, 158, 208
Bst6I	CTCTTC	2 cut(s)	61, 154
BstACI	GRCGYC	1 cut(s)	76
BstC8I	GCNNGC	2 cut(s)	552, 601
BstDEI	CTNAG	1 cut(s)	905
BstH2I	RGCGCY	1 cut(s)	741
BstHHI	GCGC	1 cut(s)	740
BstKTI	GATC	4 cut(s)	24, 95, 238, 890
BstMAI	GTCTC	3 cut(s)	149, 352, 504
BstMBI	GATC	4 cut(s)	21, 92, 235, 887
BstMWI	GCNNNNNNNGC	2 cut(s)	11, 340
BstNI	CCWGG	1 cut(s)	337
BstSCI	CCNGG	1 cut(s)	335
BstSFI	CTRYAG	2 cut(s)	405, 891
BstV2I	GAAGAC	2 cut(s)	122, 482
BstX2I	RGATCY	2 cut(s)	92, 887
BstXI	CCANNNNNNTGG	1 cut(s)	41
BstYI	RGATCY	2 cut(s)	92, 887
Bsu15I	ATCGAT	2 cut(s)	354, 770
BsuI	GTATCC	1 cut(s)	658
BsuRI	GGCC	1 cut(s)	554
BsuTUI	ATCGAT	2 cut(s)	354, 770
BtsIMutI	CAGTG	2 cut(s)	139, 204
BveI	ACCTGC	1 cut(s)	873
Cac8I	GCNNGC	2 cut(s)	552, 601
CaiI	CAGNNNCTG	1 cut(s)	689
CciI	TCATGA	1 cut(s)	85
CfoI	GCGC	1 cut(s)	740
Cfr13I	GGNCC	2 cut(s)	31, 677
ClaI	ATCGAT	2 cut(s)	354, 770
CseI	GACGC	1 cut(s)	65
Csp6I	GTAC	3 cut(s)	580, 743, 862
CspCI	CAANNNNNGTGG	2 cut(s)	211, 246
CviAII	CATG	7 cut(s)	41, 80, 86, 374, 640, 730, 884
CviQI	GTAC	3 cut(s)	580, 743, 862
DdeI	CTNAG	1 cut(s)	905
DpnI	GATC	4 cut(s)	23, 94, 237, 889
DpnII	GATC	4 cut(s)	21, 92, 235, 887
DraI	TTTAAA	1 cut(s)	850
DrdI	GACNNNNNNGTC	1 cut(s)	484
DseDI	GACNNNNNNGTC	1 cut(s)	484
EaeI	YGGCCR	1 cut(s)	552
Eam1104I	CTCTTC	2 cut(s)	61, 154
EarI	CTCTTC	2 cut(s)	61, 154
Eco130I	CCWWGG	1 cut(s)	222
Eco47I	GGWCC	2 cut(s)	31, 677
Eco57I	CTGAAG	1 cut(s)	494
Eco88I	CYCGRG	1 cut(s)	51
EcoRII	CCWGG	1 cut(s)	335
EcoT14I	CCWWGG	1 cut(s)	222
EcoT22I	ATGCAT	1 cut(s)	571
ErhI	CCWWGG	1 cut(s)	222
FaeI	CATG	7 cut(s)	44, 83, 89, 377, 643, 733, 887
FatI	CATG	7 cut(s)	40, 79, 85, 373, 639, 729, 883
FspBI	CTAG	1 cut(s)	464
GlaI	GCGC	1 cut(s)	739
HaeII	RGCGCY	1 cut(s)	741
HaeIII	GGCC	1 cut(s)	554
HapII	CCGG	1 cut(s)	450
HgaI	GACGC	1 cut(s)	65
HhaI	GCGC	1 cut(s)	740
Hin1I	GRCGYC	1 cut(s)	76
Hin1II	CATG	7 cut(s)	44, 83, 89, 377, 643, 733, 887
Hin6I	GCGC	1 cut(s)	738
HinP1I	GCGC	1 cut(s)	738
HindIII	AAGCTT	1 cut(s)	383
HinfI	GANTC	3 cut(s)	590, 618, 772
HpaII	CCGG	1 cut(s)	450
HphI	GGTGA	2 cut(s)	767, 853
Hpy166II	GTNNAC	2 cut(s)	680, 862
Hpy188I	TCNGA	5 cut(s)	26, 175, 394, 509, 660
Hpy188III	TCNNGA	5 cut(s)	86, 161, 316, 489, 539
Hpy8I	GTNNAC	2 cut(s)	680, 862
HpyAV	CCTTC	4 cut(s)	40, 714, 817, 843
HpyCH4III	ACNGT	3 cut(s)	143, 158, 208
HpyCH4IV	ACGT	1 cut(s)	645
HpyCH4V	TGCA	3 cut(s)	434, 569, 599
HpyF10VI	GCNNNNNNNGC	2 cut(s)	11, 340
HpyF3I	CTNAG	1 cut(s)	905
HpySE526I	ACGT	1 cut(s)	645
Hsp92I	GRCGYC	1 cut(s)	76
Hsp92II	CATG	7 cut(s)	44, 83, 89, 377, 643, 733, 887
HspAI	GCGC	1 cut(s)	738
Kzo9I	GATC	4 cut(s)	21, 92, 235, 887
LmnI	GCTCC	1 cut(s)	340
LweI	GCATC	2 cut(s)	132, 578
MaeI	CTAG	1 cut(s)	464
MaeII	ACGT	1 cut(s)	645
MalI	GATC	4 cut(s)	23, 94, 237, 889
MboI	GATC	4 cut(s)	21, 92, 235, 887
MboII	GAAGA	4 cut(s)	78, 122, 141, 487
MflI	RGATCY	2 cut(s)	92, 887
MlsI	TGGCCA	1 cut(s)	554
MluCI	AATT	1 cut(s)	254
MluNI	TGGCCA	1 cut(s)	554
MlyI	GAGTC	2 cut(s)	599, 612
MmeI	TCCRAC	3 cut(s)	43, 632, 736
MnlI	CCTC	9 cut(s)	244, 403, 452, 492, 553, 570, 737, 891, 928
Mox20I	TGGCCA	1 cut(s)	554
Mph1103I	ATGCAT	1 cut(s)	571
MroXI	GAANNNNTTC	1 cut(s)	752
MscI	TGGCCA	1 cut(s)	554
MseI	TTAA	7 cut(s)	198, 381, 437, 443, 564, 648, 849
MslI	CAYNNNNRTG	2 cut(s)	84, 372
Msp20I	TGGCCA	1 cut(s)	554
MspI	CCGG	1 cut(s)	450
MspR9I	CCNGG	1 cut(s)	337
Mva1269I	GAATGC	2 cut(s)	552, 603
MvaI	CCWGG	1 cut(s)	337
MwoI	GCNNNNNNNGC	2 cut(s)	11, 340
NdeII	GATC	4 cut(s)	21, 92, 235, 887
NlaIII	CATG	7 cut(s)	44, 83, 89, 377, 643, 733, 887
NsiI	ATGCAT	1 cut(s)	571
PaeR7I	CTCGAG	1 cut(s)	51
PagI	TCATGA	1 cut(s)	85
PasI	CCCWGGG	1 cut(s)	336
PctI	GAATGC	2 cut(s)	552, 603
PdmI	GAANNNNTTC	1 cut(s)	752
PfeI	GAWTC	1 cut(s)	772
PflMI	CCANNNNNTGG	1 cut(s)	689
PleI	GAGTC	2 cut(s)	598, 612
PpsI	GAGTC	2 cut(s)	598, 612
Psp6I	CCWGG	1 cut(s)	335
PspGI	CCWGG	1 cut(s)	335
PspPI	GGNCC	2 cut(s)	31, 677
PspXI	VCTCGAGB	1 cut(s)	51
PstNI	CAGNNNCTG	1 cut(s)	689
PsuI	RGATCY	2 cut(s)	92, 887
RsaI	GTAC	3 cut(s)	581, 744, 863
RsaNI	GTAC	3 cut(s)	580, 743, 862
RseI	CAYNNNNRTG	2 cut(s)	84, 372
SaqAI	TTAA	7 cut(s)	198, 381, 437, 443, 564, 648, 849
Sau3AI	GATC	4 cut(s)	21, 92, 235, 887
Sau96I	GGNCC	2 cut(s)	31, 677
SchI	GAGTC	2 cut(s)	599, 612
ScrFI	CCNGG	1 cut(s)	337
SfaNI	GCATC	2 cut(s)	132, 578
SfcI	CTRYAG	2 cut(s)	405, 891
Sfr274I	CTCGAG	1 cut(s)	51
SinI	GGWCC	2 cut(s)	31, 677
SlaI	CTCGAG	1 cut(s)	51
SmiMI	CAYNNNNRTG	2 cut(s)	84, 372
SmlI	CTYRAG	1 cut(s)	51
SmoI	CTYRAG	1 cut(s)	51
Sse9I	AATT	1 cut(s)	254
SspI	AATATT	1 cut(s)	793
SspMI	CTAG	1 cut(s)	464
StyD4I	CCNGG	1 cut(s)	335
StyI	CCWWGG	1 cut(s)	222
TaaI	ACNGT	3 cut(s)	143, 158, 208
TaiI	ACGT	1 cut(s)	648
TaqI	TCGA	4 cut(s)	52, 354, 770, 920
TasI	AATT	1 cut(s)	254
TfiI	GAWTC	1 cut(s)	772
Tru1I	TTAA	7 cut(s)	198, 381, 437, 443, 564, 648, 849
Tru9I	TTAA	7 cut(s)	198, 381, 437, 443, 564, 648, 849
TscAI	CASTG	2 cut(s)	146, 211
TspDTI	ATGAA	3 cut(s)	628, 785, 891
TspRI	CASTG	2 cut(s)	146, 211
Van91I	CCANNNNNTGG	1 cut(s)	689
VpaK11BI	GGWCC	2 cut(s)	31, 677
XapI	RAATTY	1 cut(s)	254
XhoI	CTCGAG	1 cut(s)	51
XmnI	GAANNNNTTC	1 cut(s)	752
XspI	CTAG	1 cut(s)	464
Zsp2I	ATGCAT	1 cut(s)	571

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.