Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0009291

Physical Location & Seq

Genomic Coordinates Reverse (-)

10891688 .. 10896897

Gene Structure 5210 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G072000.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 957 bp

ATGTCGAACAAAATAGAGGGCTTCAACTTCGACCAGAGGCATGGCAAGCAGAGGGTGAGGGTGGCTAGGGTTTGGCGGAGCGAAAATGGACGCCATTCCATCGTCGAATGGAACGTCGGCATCAGCCTCCTCACCGATTCGGTGGTTGCCTATACCCGCGACGACAACTCCGATCTCGTCGCTACCGATACCATGAAGAACACTGTATATGCAAAGGCTAAGGAATGTGTAGAAGAACTGTCAGTGGAAGACTTTGCAATTCGACTTGCTAAACACTTCACATCTCTTTACCAGCAGGTCACTGCTGCTTTAGTAAAGATTGTGGAGAAGCCATGGGAGCGAGTATCCATAGATGGTCAACCACATGAACATGGTTTCAAATTAGGATCCGAGAAGCATACAACAGAGGTAATTTTAAAGAAATCTGGTGCATTGAAGGTGACTTCTGGTATTGAAGGACTGGCTCTGCTAAAGACAACAAAGTCAGGTTTTGAGGGATTTATTAGGGACAAATACACAGTTCTTCCTGACACGCGTGAGAGGATTCTGGCTACAGATCTCACTGCATCATGGACACAAATCCTTGTTACTGAGATAAATGGATGCAGGTATCCTTACGAATCTATTTATAGCATCCCTCAAAAGCCGCTATACTTCACAGAAAGATACTTGAGTGTGAAAAAAGTTCTGGCTGACACTTTCTACGGTCCTCCAAAAGAAGGAGTATACAGCCCCTCTGTCCAAAGCACTCTTTATCACATGGCAACAAATGTTCTCAAGGGGTTTCCTGACATAGCAACAGTACAACTGAAAATGCCAAATATTCATTTCTTACCTGTTAATCTATCCAACAAGGATAATACTATTGTGAAGTTTGAGGATGATGTTTATCTCCCAACAGATGAACCGCACGGATCGATAGAAGCTACTCTAAGCCGTTTCTGGTCAAAGATGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004846 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005777 GO:0006996 GO:0007031 GO:0008150 GO:0008152 GO:0009987 GO:0016043 GO:0016491 GO:0016661 GO:0016663 GO:0042579 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0055114 GO:0071840

KEGG Pathways

Metabolic & Signaling

ko00230 ko00232 ko01100 ko01120 map00230 map00232 map01100 map01120

Pfam Domains

Protein Families

Uricase

Protein Analysis

319

Amino Acids

36.07

Weight (kDa)

7.75

Isoelectric Point (pI)

31.59

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009291)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G26230
fragaria_vesca	FvH4_7g03231 FvH4_7g03231
malus_domestica	MD02G1258600.v1.1 MD07G1062200.v1.1
prunus_persica	Prupe.2G072000_v2.0.a1 Prupe.2G072000_v2.0.a1 Prupe.2G072000_v2.0.a1
pyrus_communis	pycom02g21980 pycom07g04770
rosa_chinensis	RchiOBHm_Chr1g0325281 RchiOBHm_Chr1g0325311
rosa_laevigata	RLG00000030147
rosa_multiflora	Rmu_sc0007742.1_g000034 Rmu_sc0020800.1_g000011
rosa_roxburghii	Rroxscaffold_4G00324830
rosa_rugosa	Rorug01G0051200
rosa_samantha	Rh1AG066400 Rh1BG054500 Rh1CG067800 Rh1DG072600
rosa_wichuraiana	Rw1G005550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	481
Acc36I	ACCTGC	2 cut(s)	286, 597
AccI	GTMKAC	1 cut(s)	726
AccII	CGCG	2 cut(s)	159, 535
AciI	CCGC	4 cut(s)	76, 157, 647, 908
AclWI	GGATC	3 cut(s)	381, 394, 922
AcyI	GRCGYC	1 cut(s)	91
AfaI	GTAC	1 cut(s)	804
AfiI	CCNNNNNNNGG	1 cut(s)	719
AflIII	ACRYGT	1 cut(s)	533
AgsI	TTSAA	4 cut(s)	25, 379, 436, 455
AluBI	AGCT	1 cut(s)	926
AluI	AGCT	1 cut(s)	926
AlwI	GGATC	3 cut(s)	381, 394, 922
ApeKI	GCWGC	1 cut(s)	305
ArsI	GACNNNNNNTTYG	2 cut(s)	99, 131
AspS9I	GGNCC	1 cut(s)	707
AsuHPI	GGTGA	3 cut(s)	67, 124, 451
AvaII	GGWCC	1 cut(s)	707
BaeI	ACNNNNGTAYC	2 cut(s)	658, 691
BamHI	GGATCC	1 cut(s)	386
BbsI	GAAGAC	1 cut(s)	255
BbvI	GCAGC	1 cut(s)	292
BccI	CCATC	2 cut(s)	107, 347
BceAI	ACGGC	1 cut(s)	921
BciVI	GTATCC	2 cut(s)	355, 621
BfaI	CTAG	1 cut(s)	66
BfmI	CTRYAG	1 cut(s)	552
BfuAI	ACCTGC	2 cut(s)	286, 597
BfuI	GTATCC	2 cut(s)	355, 621
BglII	AGATCT	1 cut(s)	556
BisI	GCNGC	2 cut(s)	306, 647
BlsI	GCNGC	2 cut(s)	307, 648
Bme18I	GGWCC	1 cut(s)	707
BmgT120I	GGNCC	1 cut(s)	707
BmiI	GGNNCC	1 cut(s)	388
BmsI	GCATC	4 cut(s)	129, 575, 593, 642
BpiI	GAAGAC	1 cut(s)	255
Bpu10I	CCTNAGC	1 cut(s)	219
BpuEI	CTTGAG	2 cut(s)	691, 761
Bsa29I	ATCGAT	1 cut(s)	917
BsaBI	GATNNNNATC	1 cut(s)	888
BsaHI	GRCGYC	1 cut(s)	91
BsaJI	CCNNGG	1 cut(s)	332
BsaXI	ACNNNNNCTCC	2 cut(s)	152, 182
Bsc4I	CCNNNNNNNGG	1 cut(s)	719
Bse1I	ACTGG	1 cut(s)	465
Bse8I	GATNNNNATC	1 cut(s)	888
BseCI	ATCGAT	1 cut(s)	917
BseDI	CCNNGG	1 cut(s)	332
BseGI	GGATG	3 cut(s)	608, 633, 886
BseJI	GATNNNNATC	1 cut(s)	888
BseLI	CCNNNNNNNGG	1 cut(s)	719
BseMII	CTCAG	1 cut(s)	582
BseNI	ACTGG	1 cut(s)	465
BseRI	GAGGAG	1 cut(s)	119
BseXI	GCAGC	1 cut(s)	292
Bsh1236I	CGCG	2 cut(s)	159, 535
BshVI	ATCGAT	1 cut(s)	917
BslFI	GGGAC	1 cut(s)	521
BslI	CCNNNNNNNGG	1 cut(s)	719
BsmFI	GGGAC	1 cut(s)	521
Bsp143I	GATC	4 cut(s)	172, 386, 556, 914
Bsp19I	CCATGG	1 cut(s)	332
BspACI	CCGC	4 cut(s)	76, 157, 647, 908
BspCNI	CTCAG	1 cut(s)	583
BspDI	ATCGAT	1 cut(s)	917
BspFNI	CGCG	2 cut(s)	159, 535
BspLI	GGNNCC	1 cut(s)	388
BspMI	ACCTGC	2 cut(s)	286, 597
BspPI	GGATC	3 cut(s)	381, 394, 922
BsrI	ACTGG	1 cut(s)	465
BssECI	CCNNGG	1 cut(s)	332
BssMI	GATC	4 cut(s)	172, 386, 556, 914
BssNAI	GTATAC	1 cut(s)	727
BssNI	GRCGYC	1 cut(s)	91
BssT1I	CCWWGG	1 cut(s)	332
Bst1107I	GTATAC	1 cut(s)	727
Bst4CI	ACNGT	5 cut(s)	205, 240, 520, 707, 802
BstACI	GRCGYC	1 cut(s)	91
BstC8I	GCNNGC	1 cut(s)	47
BstDEI	CTNAG	3 cut(s)	219, 591, 932
BstDSI	CCRYGG	1 cut(s)	332
BstF5I	GGATG	3 cut(s)	608, 633, 886
BstFNI	CGCG	2 cut(s)	159, 535
BstKTI	GATC	4 cut(s)	175, 389, 559, 917
BstMBI	GATC	4 cut(s)	172, 386, 556, 914
BstMWI	GCNNNNNNNGC	2 cut(s)	46, 337
BstSFI	CTRYAG	1 cut(s)	552
BstUI	CGCG	2 cut(s)	159, 535
BstV1I	GCAGC	1 cut(s)	292
BstV2I	GAAGAC	1 cut(s)	255
BstX2I	RGATCY	2 cut(s)	386, 556
BstXI	CCANNNNNNTGG	1 cut(s)	41
BstYI	RGATCY	2 cut(s)	386, 556
BstZ17I	GTATAC	1 cut(s)	727
Bsu15I	ATCGAT	1 cut(s)	917
BsuI	GTATCC	2 cut(s)	355, 621
BsuTUI	ATCGAT	1 cut(s)	917
BtgI	CCRYGG	1 cut(s)	332
BtsCI	GGATG	3 cut(s)	608, 633, 886
BtsI	GCAGTG	2 cut(s)	300, 561
BtsIMutI	CAGTG	4 cut(s)	201, 249, 300, 561
BveI	ACCTGC	2 cut(s)	286, 597
Cac8I	GCNNGC	1 cut(s)	47
Cfr13I	GGNCC	1 cut(s)	707
ClaI	ATCGAT	1 cut(s)	917
CseI	GACGC	1 cut(s)	99
Csp6I	GTAC	1 cut(s)	803
CviAII	CATG	7 cut(s)	41, 193, 333, 365, 371, 570, 760
CviQI	GTAC	1 cut(s)	803
DdeI	CTNAG	3 cut(s)	219, 591, 932
DpnI	GATC	4 cut(s)	174, 388, 558, 916
DpnII	GATC	4 cut(s)	172, 386, 556, 914
DraI	TTTAAA	1 cut(s)	417
DrdI	GACNNNNNNGTC	1 cut(s)	481
DseDI	GACNNNNNNGTC	1 cut(s)	481
EciI	GGCGGA	1 cut(s)	91
Eco130I	CCWWGG	1 cut(s)	332
Eco47I	GGWCC	1 cut(s)	707
EcoT14I	CCWWGG	1 cut(s)	332
ErhI	CCWWGG	1 cut(s)	332
FaeI	CATG	7 cut(s)	44, 196, 336, 368, 374, 573, 763
FaqI	GGGAC	1 cut(s)	521
FatI	CATG	7 cut(s)	40, 192, 332, 364, 370, 569, 759
FauI	CCCGC	1 cut(s)	164
FblI	GTMKAC	1 cut(s)	726
Fnu4HI	GCNGC	2 cut(s)	306, 647
FokI	GGATG	3 cut(s)	615, 620, 893
Fsp4HI	GCNGC	2 cut(s)	306, 647
FspBI	CTAG	1 cut(s)	66
GluI	GCNGC	2 cut(s)	306, 647
HgaI	GACGC	1 cut(s)	99
Hin1I	GRCGYC	1 cut(s)	91
Hin1II	CATG	7 cut(s)	44, 196, 336, 368, 374, 573, 763
HincII	GTYRAC	1 cut(s)	359
HindII	GTYRAC	1 cut(s)	359
HinfI	GANTC	3 cut(s)	137, 544, 620
HphI	GGTGA	3 cut(s)	67, 124, 451
Hpy166II	GTNNAC	2 cut(s)	359, 727
Hpy188I	TCNGA	2 cut(s)	172, 391
Hpy188III	TCNNGA	2 cut(s)	527, 788
Hpy8I	GTNNAC	2 cut(s)	359, 727
Hpy99I	CGWCG	4 cut(s)	107, 119, 164, 182
HpyAV	CCTTC	3 cut(s)	430, 449, 713
HpyCH4III	ACNGT	5 cut(s)	205, 240, 520, 707, 802
HpyCH4IV	ACGT	1 cut(s)	114
HpyCH4V	TGCA	5 cut(s)	212, 257, 431, 566, 606
HpyF10VI	GCNNNNNNNGC	2 cut(s)	46, 337
HpyF3I	CTNAG	3 cut(s)	219, 591, 932
HpySE526I	ACGT	1 cut(s)	114
Hsp92I	GRCGYC	1 cut(s)	91
Hsp92II	CATG	7 cut(s)	44, 196, 336, 368, 374, 573, 763
Kzo9I	GATC	4 cut(s)	172, 386, 556, 914
LmnI	GCTCC	2 cut(s)	78, 337
Lsp1109I	GCAGC	1 cut(s)	292
LweI	GCATC	4 cut(s)	129, 575, 593, 642
MaeI	CTAG	1 cut(s)	66
MaeII	ACGT	1 cut(s)	114
MaeIII	GTNAC	3 cut(s)	298, 439, 586
MalI	GATC	4 cut(s)	174, 388, 558, 916
MboI	GATC	4 cut(s)	172, 386, 556, 914
MboII	GAAGA	4 cut(s)	208, 245, 260, 515
MflI	RGATCY	2 cut(s)	386, 556
MluCI	AATT	3 cut(s)	258, 380, 411
MluI	ACGCGT	1 cut(s)	533
MmeI	TCCRAC	1 cut(s)	873
MseI	TTAA	2 cut(s)	416, 840
MslI	CAYNNNNRTG	1 cut(s)	369
MvnI	CGCG	2 cut(s)	159, 535
MwoI	GCNNNNNNNGC	2 cut(s)	46, 337
NcoI	CCATGG	1 cut(s)	332
NdeII	GATC	4 cut(s)	172, 386, 556, 914
NlaIII	CATG	7 cut(s)	44, 196, 336, 368, 374, 573, 763
NlaIV	GGNNCC	1 cut(s)	388
NmuCI	GTSAC	2 cut(s)	298, 439
PcsI	WCGNNNNNNNCGW	3 cut(s)	111, 168, 183
PfeI	GAWTC	3 cut(s)	137, 544, 620
PkrI	GCNGC	2 cut(s)	307, 648
PspN4I	GGNNCC	1 cut(s)	388
PspPI	GGNCC	1 cut(s)	707
PsuI	RGATCY	2 cut(s)	386, 556
RsaI	GTAC	1 cut(s)	804
RsaNI	GTAC	1 cut(s)	803
RseI	CAYNNNNRTG	1 cut(s)	369
SaqAI	TTAA	2 cut(s)	416, 840
SatI	GCNGC	2 cut(s)	306, 647
Sau3AI	GATC	4 cut(s)	172, 386, 556, 914
Sau96I	GGNCC	1 cut(s)	707
SetI	ASST	8 cut(s)	117, 300, 411, 441, 490, 611, 838, 928
SfaNI	GCATC	4 cut(s)	129, 575, 593, 642
SfcI	CTRYAG	1 cut(s)	552
SinI	GGWCC	1 cut(s)	707
SmiMI	CAYNNNNRTG	1 cut(s)	369
SmlI	CTYRAG	2 cut(s)	670, 776
SmoI	CTYRAG	2 cut(s)	670, 776
Sse9I	AATT	3 cut(s)	258, 380, 411
SsiI	CCGC	4 cut(s)	76, 157, 647, 908
SspI	AATATT	1 cut(s)	823
SspMI	CTAG	1 cut(s)	66
StyI	CCWWGG	1 cut(s)	332
TaaI	ACNGT	5 cut(s)	205, 240, 520, 707, 802
TaiI	ACGT	1 cut(s)	117
TaqI	TCGA	5 cut(s)	5, 30, 105, 262, 917
TasI	AATT	3 cut(s)	258, 380, 411
TatI	WGTACW	1 cut(s)	802
TauI	GCSGC	1 cut(s)	649
TfiI	GAWTC	3 cut(s)	137, 544, 620
Tru1I	TTAA	2 cut(s)	416, 840
Tru9I	TTAA	2 cut(s)	416, 840
TscAI	CASTG	4 cut(s)	208, 249, 307, 568
TseFI	GTSAC	2 cut(s)	298, 439
TseI	GCWGC	1 cut(s)	305
Tsp45I	GTSAC	2 cut(s)	298, 439
TspDTI	ATGAA	4 cut(s)	209, 381, 815, 918
TspGWI	ACGGA	1 cut(s)	927
TspRI	CASTG	4 cut(s)	208, 249, 307, 568
VpaK11BI	GGWCC	1 cut(s)	707
XmiI	GTMKAC	1 cut(s)	726
XspI	CTAG	1 cut(s)	66

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.