Rorug01G0051200

Catalyzes the oxidation of uric acid to 5- hydroxyisourate, which is further processed to form (S)-allantoin

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
Physical Location & Seq
Reverse (-)
8347293 .. 8348882
1590 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0051200.1

Sequence Viewer

Length: 1590 bp
ATGCATTGCTTTAATCTAGCTCTTTTGGCTAAACAAGGCTGGAGATTGATACAACAGCCGGACTCTCTAATTGCACAACTTTTGAAGGCGAAATATTACCCGAATTGCGCCTTCATGGAGGCTGAGCTTAAGAATGGAGCTTCTTATACTTGGCGTAGTATCATTGCTGGAAGAGAGGTGTTGAAAAAAGGTGTACGTTTTCAGGTTGGGGATGGATGCGACATTTTGGTCTGGAGGGATCCATGGTTCAGTCTACCTTATTCCTTCAAACCATTTTCACCCATGATGGAGGGAACAGAGGACATGGTTGTGGCAGAACTAATAGATGATGAGAACAAAGAATGGCTTATTGATATTCTAATGGAGTTGTTTACTGATGAGGAGGTGAAGAGAATTGCATGTACCCCTCTGAGCATTAGAGGTGATGCAGATAGATTAATATGGCACCATAATCCCAAGGGTGTGTTTACGGTTCGAAGTGGCTATCATGTTTACCTCCACTCCTTGAAGTGTAATGAAAGGGCGTCGTCCTCTAGTGATGGAGATGGTAATGGTCTAAGGAAATATTGGAACATGGTTTGGTTTGCATGGGTGCCTCCTAAAGTACGTAGCTTTTCATGGCGACTATTGCATGGCATAATTCCCACTAGAGCTGCACTAGCACAGCGCCATGTGCCCCTCCGGGATTTGAGATGTATTTTCTCCAAGGAAATTGAGACAGGTACACATGTTTTTAAAAACTGTTATGCATTACAATGTTTTTGGGAACTGGGGCCTTTGAAATTGCAGGCTAAAAGCCATCCAGCAAGAGATGTGAAGGAATGGGTTTTTGAATTGATGGACACGTTAGACAAAGCCCAGGTTGATCTACTGTTGATGTGCCTGTGGACTATATGGACGGAGAGAAATAATATGGTGTGGAGGAGAGCCTATTTTCAGCCAATGCATATGATCCAGTGGGCTTTTAGACATTTGGAGGAGTACCAAAAATTCAACCCGAAGGTGAGTAAGCAAAAGAAGAGGCCTATGACGAAATGGCAGAACCCTCCACGGGGGAGACTGAAAATTAATGTTGATGGGGCTTTCAGAACTGATAGTGGTTGTGGGGGTATTGGTGTTGTAGTCAGGGACGATTTGGGCACGGGTATAGCGGCTATTGCTAGGCCTTTTGTACATGCTCACTCGGCTATTAATATGGAGGCCGAGGTATGTAGAGTTGGCCTTCTTCTTGGTATTCATCAAGGTTGGACGGAAGTAGATATTGAAAGCGACTCTGCCCTTCTAGTTGCTGCGCTCCAGAGTGGGGAGGAAAATTACTCGGAAGTAAGTCGAATTCTAGATGATTGTAAAGACTATTTGACTGCTTTTCAATCAGTTATAATTCGACATATTTTTAGTGAAGCAAATGGTGTTGTAAATAGACTTGCACACCTTGCTAGCTTGTTTTGTATTGATGATGTTTGGTTAGATGAGACTCCAGCTATTATTGCGGATGTTCTCTACGAGGATTATTGTAATATCTCCTGTGTAGCACGGGGTTCAGGTTTTATGTCCCCCCCCCCCCCCGGTTGCATTTTTCTAATTCAATAA

Protein Analysis

529

Amino Acids

60.57

Weight (kDa)

6.76

Isoelectric Point (pI)

38.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-RVT PF13966 188 - 255 1.8e-12 zinc-binding in reverse transcriptase
RVT_3 PF13456 357 - 478 1e-18 Reverse transcriptase-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1379
AasI GACNNNNNNGTC 1 cut(s) 227
AccB1I GGYRCC 2 cut(s) 444, 592
AccI GTMKAC 1 cut(s) 253
AciI CCGC 2 cut(s) 1151, 1490
AclWI GGATC 3 cut(s) 233, 246, 946
AcsI RAATTY 2 cut(s) 989, 1332
AcyI GRCGYC 1 cut(s) 524
AfaI GTAC 6 cut(s) 195, 403, 606, 724, 983, 1173
AfiI CCNNNNNNNGG 4 cut(s) 1051, 1052, 1303, 1565
AflII CTTAAG 1 cut(s) 128
AflIII ACRYGT 2 cut(s) 727, 843
AjnI CCWGG 1 cut(s) 858
AloI GAACNNNNNNTCC 2 cut(s) 230, 262
AluBI AGCT 7 cut(s) 20, 127, 140, 612, 653, 1440, 1481
AluI AGCT 7 cut(s) 20, 127, 140, 612, 653, 1440, 1481
Alw26I GTCTC 3 cut(s) 710, 1051, 1466
AlwI GGATC 3 cut(s) 233, 246, 946
AoxI GGCC 5 cut(s) 773, 1022, 1163, 1200, 1219
ApeKI GCWGC 2 cut(s) 653, 1289
ApoI RAATTY 2 cut(s) 989, 1332
AseI ATTAAT 3 cut(s) 437, 1068, 1191
AspLEI GCGC 3 cut(s) 110, 669, 1294
AspS9I GGNCC 1 cut(s) 773
AsuC2I CCSGG 2 cut(s) 683, 1566
AsuHPI GGTGA 4 cut(s) 270, 397, 434, 1015
AsuII TTCGAA 1 cut(s) 475
AsuNHI GCTAGC 1 cut(s) 1436
BaeGI GKGCMC 2 cut(s) 678, 1142
BaeI ACNNNNGTAYC 2 cut(s) 714, 747
BamHI GGATCC 1 cut(s) 238
BanI GGYRCC 2 cut(s) 444, 592
BbvI GCAGC 2 cut(s) 640, 1276
BccI CCATC 7 cut(s) 206, 280, 533, 539, 807, 832, 1070
BciT130I CCWGG 1 cut(s) 860
BcnI CCSGG 2 cut(s) 683, 1566
BcoDI GTCTC 3 cut(s) 710, 1051, 1466
BfaI CTAG 8 cut(s) 17, 534, 648, 659, 1161, 1283, 1337, 1437
BfoI RGCGCY 1 cut(s) 670
BfrI CTTAAG 1 cut(s) 128
BisI GCNGC 3 cut(s) 654, 1152, 1290
BlpI GCTNAGC 1 cut(s) 123
BlsI GCNGC 3 cut(s) 655, 1153, 1291
Bme1390I CCNGG 3 cut(s) 683, 860, 1566
BmgT120I GGNCC 1 cut(s) 773
BmiI GGNNCC 4 cut(s) 240, 446, 594, 774
BmrFI CCNGG 3 cut(s) 683, 860, 1566
BmrI ACTGGG 1 cut(s) 779
BmsI GCATC 2 cut(s) 206, 415
BmtI GCTAGC 1 cut(s) 1440
BmuI ACTGGG 1 cut(s) 779
BpmI CTGGAG 4 cut(s) 61, 253, 1280, 1461
Bpu1102I GCTNAGC 1 cut(s) 123
Bpu14I TTCGAA 1 cut(s) 475
BpuMI CCSGG 2 cut(s) 683, 1566
BsaAI YACGTR 1 cut(s) 608
BsaHI GRCGYC 1 cut(s) 524
BsaJI CCNNGG 7 cut(s) 242, 456, 705, 858, 1049, 1203, 1564
BsaXI ACNNNNNCTCC 2 cut(s) 485, 515
Bsc4I CCNNNNNNNGG 4 cut(s) 1051, 1052, 1303, 1565
Bse1I ACTGG 2 cut(s) 774, 955
Bse3DI GCAATG 2 cut(s) 4, 162
BseBI CCWGG 1 cut(s) 860
BseDI CCNNGG 7 cut(s) 242, 456, 705, 858, 1049, 1203, 1564
BseGI GGATG 4 cut(s) 217, 221, 799, 1498
BseLI CCNNNNNNNGG 4 cut(s) 1051, 1052, 1303, 1565
BseMI GCAATG 2 cut(s) 4, 162
BseMII CTCAG 2 cut(s) 114, 401
BseNI ACTGG 2 cut(s) 774, 955
BseRI GAGGAG 3 cut(s) 395, 937, 992
BseSI GKGCMC 2 cut(s) 678, 1142
BseXI GCAGC 2 cut(s) 640, 1276
BsgI GTGCAG 1 cut(s) 639
BshFI GGCC 5 cut(s) 775, 1024, 1165, 1202, 1221
BshNI GGYRCC 2 cut(s) 444, 592
BsiSI CCGG 3 cut(s) 59, 682, 1566
BslFI GGGAC 2 cut(s) 1142, 1537
BslI CCNNNNNNNGG 4 cut(s) 1051, 1052, 1303, 1565
BsmAI GTCTC 3 cut(s) 710, 1051, 1466
BsmFI GGGAC 2 cut(s) 1142, 1537
BsnI GGCC 5 cut(s) 775, 1024, 1165, 1202, 1221
Bsp119I TTCGAA 1 cut(s) 475
Bsp1286I GDGCHC 2 cut(s) 678, 1142
Bsp1407I TGTACA 1 cut(s) 1171
Bsp143I GATC 3 cut(s) 238, 865, 951
Bsp1720I GCTNAGC 1 cut(s) 123
Bsp19I CCATGG 1 cut(s) 242
BspACI CCGC 2 cut(s) 1151, 1490
BspANI GGCC 5 cut(s) 775, 1024, 1165, 1202, 1221
BspCNI CTCAG 2 cut(s) 115, 402
BspLI GGNNCC 4 cut(s) 240, 446, 594, 774
BspOI GCTAGC 1 cut(s) 1440
BspPI GGATC 3 cut(s) 233, 246, 946
BspT104I TTCGAA 1 cut(s) 475
BspT107I GGYRCC 2 cut(s) 444, 592
BspTI CTTAAG 1 cut(s) 128
BsrDI GCAATG 2 cut(s) 4, 162
BsrGI TGTACA 1 cut(s) 1171
BsrI ACTGG 2 cut(s) 774, 955
BssECI CCNNGG 7 cut(s) 242, 456, 705, 858, 1049, 1203, 1564
BssMI GATC 3 cut(s) 238, 865, 951
BssNI GRCGYC 1 cut(s) 524
BssT1I CCWWGG 3 cut(s) 242, 456, 705
Bst2UI CCWGG 1 cut(s) 860
Bst4CI ACNGT 3 cut(s) 472, 743, 873
Bst6I CTCTTC 3 cut(s) 166, 383, 1013
BstACI GRCGYC 1 cut(s) 524
BstAFI CTTAAG 1 cut(s) 128
BstAPI GCANNNNNTGC 1 cut(s) 1433
BstAUI TGTACA 1 cut(s) 1171
BstBAI YACGTR 1 cut(s) 608
BstBI TTCGAA 1 cut(s) 475
BstC8I GCNNGC 2 cut(s) 789, 1438
BstDEI CTNAG 3 cut(s) 123, 410, 557
BstDSI CCRYGG 2 cut(s) 242, 1049
BstF5I GGATG 4 cut(s) 217, 221, 799, 1498
BstH2I RGCGCY 1 cut(s) 670
BstHHI GCGC 3 cut(s) 110, 669, 1294
BstKTI GATC 3 cut(s) 241, 868, 954
BstMAI GTCTC 3 cut(s) 710, 1051, 1466
BstMBI GATC 3 cut(s) 238, 865, 951
BstMWI GCNNNNNNNGC 8 cut(s) 26, 628, 659, 673, 1157, 1184, 1433, 1487
BstNI CCWGG 1 cut(s) 860
BstNSI RCATGY 3 cut(s) 402, 731, 1178
BstSCI CCNGG 3 cut(s) 681, 858, 1564
BstSLI GKGCMC 2 cut(s) 678, 1142
BstSNI TACGTA 1 cut(s) 608
BstV1I GCAGC 2 cut(s) 640, 1276
BstX2I RGATCY 1 cut(s) 238
BstYI RGATCY 1 cut(s) 238
BsuRI GGCC 5 cut(s) 775, 1024, 1165, 1202, 1221
BtgI CCRYGG 2 cut(s) 242, 1049
BtsCI GGATG 4 cut(s) 217, 221, 799, 1498
BtsIMutI CAGTG 1 cut(s) 962
Cac8I GCNNGC 2 cut(s) 789, 1438
CfoI GCGC 3 cut(s) 110, 669, 1294
Cfr13I GGNCC 1 cut(s) 773
CseI GACGC 1 cut(s) 513
Csp6I GTAC 6 cut(s) 194, 402, 605, 723, 982, 1172
CviQI GTAC 6 cut(s) 194, 402, 605, 723, 982, 1172
DdeI CTNAG 3 cut(s) 123, 410, 557
DpnI GATC 3 cut(s) 240, 867, 953
DpnII GATC 3 cut(s) 238, 865, 951
DraI TTTAAA 1 cut(s) 736
DrdI GACNNNNNNGTC 1 cut(s) 227
DseDI GACNNNNNNGTC 1 cut(s) 227
Eam1104I CTCTTC 3 cut(s) 166, 383, 1013
EarI CTCTTC 3 cut(s) 166, 383, 1013
Eco105I TACGTA 1 cut(s) 608
Eco130I CCWWGG 3 cut(s) 242, 456, 705
Eco147I AGGCCT 2 cut(s) 1024, 1165
EcoO109I RGGNCCY 1 cut(s) 773
EcoRI GAATTC 1 cut(s) 1332
EcoRII CCWGG 1 cut(s) 858
EcoT14I CCWWGG 3 cut(s) 242, 456, 705
EcoT22I ATGCAT 3 cut(s) 6, 751, 948
ErhI CCWWGG 3 cut(s) 242, 456, 705
FalI AAGNNNNNCTT 2 cut(s) 330, 362
FaqI GGGAC 2 cut(s) 1142, 1537
FauNDI CATATG 1 cut(s) 948
FblI GTMKAC 1 cut(s) 253
Fnu4HI GCNGC 3 cut(s) 654, 1152, 1290
FokI GGATG 4 cut(s) 224, 228, 786, 1505
Fsp4HI GCNGC 3 cut(s) 654, 1152, 1290
FspBI CTAG 8 cut(s) 17, 534, 648, 659, 1161, 1283, 1337, 1437
GlaI GCGC 3 cut(s) 109, 668, 1293
GluI GCNGC 3 cut(s) 654, 1152, 1290
GsuI CTGGAG 4 cut(s) 61, 253, 1280, 1461
HaeII RGCGCY 1 cut(s) 670
HaeIII GGCC 5 cut(s) 775, 1024, 1165, 1202, 1221
HapII CCGG 3 cut(s) 59, 682, 1566
HgaI GACGC 1 cut(s) 513
HhaI GCGC 3 cut(s) 110, 669, 1294
Hin1I GRCGYC 1 cut(s) 524
Hin6I GCGC 3 cut(s) 108, 667, 1292
HinP1I GCGC 3 cut(s) 108, 667, 1292
HinfI GANTC 3 cut(s) 62, 1271, 1474
HpaII CCGG 3 cut(s) 59, 682, 1566
HphI GGTGA 4 cut(s) 270, 397, 434, 1015
Hpy166II GTNNAC 7 cut(s) 194, 254, 372, 468, 493, 725, 888
Hpy188I TCNGA 3 cut(s) 411, 1088, 1321
Hpy188III TCNNGA 3 cut(s) 232, 1297, 1337
Hpy8I GTNNAC 7 cut(s) 194, 254, 372, 468, 493, 725, 888
Hpy99I CGWCG 1 cut(s) 529
HpyAV CCTTC 7 cut(s) 79, 121, 274, 811, 994, 1232, 1289
HpyCH4III ACNGT 3 cut(s) 472, 743, 873
HpyCH4IV ACGT 3 cut(s) 196, 607, 845
HpyF10VI GCNNNNNNNGC 8 cut(s) 26, 628, 659, 673, 1157, 1184, 1433, 1487
HpyF3I CTNAG 3 cut(s) 123, 410, 557
HpySE526I ACGT 3 cut(s) 196, 607, 845
Hsp92I GRCGYC 1 cut(s) 524
HspAI GCGC 3 cut(s) 108, 667, 1292
Kzo9I GATC 3 cut(s) 238, 865, 951
LmnI GCTCC 2 cut(s) 137, 1299
Lsp1109I GCAGC 2 cut(s) 640, 1276
LweI GCATC 2 cut(s) 206, 415
MaeI CTAG 8 cut(s) 17, 534, 648, 659, 1161, 1283, 1337, 1437
MaeII ACGT 3 cut(s) 196, 607, 845
MalI GATC 3 cut(s) 240, 867, 953
MboI GATC 3 cut(s) 238, 865, 951
MboII GAAGA 4 cut(s) 183, 400, 1030, 1217
MflI RGATCY 1 cut(s) 238
MhlI GDGCHC 2 cut(s) 678, 1142
MlyI GAGTC 3 cut(s) 56, 1265, 1468
MmeI TCCRAC 1 cut(s) 1226
Mph1103I ATGCAT 3 cut(s) 6, 751, 948
MseI TTAA 6 cut(s) 12, 129, 437, 735, 1068, 1191
MslI CAYNNNNRTG 2 cut(s) 308, 754
MspCI CTTAAG 1 cut(s) 128
MspI CCGG 3 cut(s) 59, 682, 1566
MspR9I CCNGG 3 cut(s) 683, 860, 1566
MvaI CCWGG 1 cut(s) 860
MwoI GCNNNNNNNGC 8 cut(s) 26, 628, 659, 673, 1157, 1184, 1433, 1487
NciI CCSGG 2 cut(s) 683, 1566
NcoI CCATGG 1 cut(s) 242
NdeI CATATG 1 cut(s) 948
NdeII GATC 3 cut(s) 238, 865, 951
NheI GCTAGC 1 cut(s) 1436
NlaIV GGNNCC 4 cut(s) 240, 446, 594, 774
NmeAIII GCCGAG 2 cut(s) 1163, 1228
NsiI ATGCAT 3 cut(s) 6, 751, 948
NspI RCATGY 3 cut(s) 402, 731, 1178
NspV TTCGAA 1 cut(s) 475
PceI AGGCCT 2 cut(s) 1024, 1165
PciI ACATGT 1 cut(s) 727
PfoI TCCNGGA 1 cut(s) 681
PkrI GCNGC 3 cut(s) 655, 1153, 1291
PleI GAGTC 3 cut(s) 56, 1265, 1468
PpsI GAGTC 3 cut(s) 56, 1265, 1468
Ppu21I YACGTR 1 cut(s) 608
PscI ACATGT 1 cut(s) 727
PshBI ATTAAT 3 cut(s) 437, 1068, 1191
PsiI TTATAA 1 cut(s) 1379
Psp6I CCWGG 1 cut(s) 858
PspGI CCWGG 1 cut(s) 858
PspN4I GGNNCC 4 cut(s) 240, 446, 594, 774
PspPI GGNCC 1 cut(s) 773
PsuI RGATCY 1 cut(s) 238
RsaI GTAC 6 cut(s) 195, 403, 606, 724, 983, 1173
RsaNI GTAC 6 cut(s) 194, 402, 605, 723, 982, 1172
RseI CAYNNNNRTG 2 cut(s) 308, 754
SaqAI TTAA 6 cut(s) 12, 129, 437, 735, 1068, 1191
SatI GCNGC 3 cut(s) 654, 1152, 1290
Sau3AI GATC 3 cut(s) 238, 865, 951
Sau96I GGNCC 1 cut(s) 773
SchI GAGTC 3 cut(s) 56, 1265, 1468
ScrFI CCNGG 3 cut(s) 683, 860, 1566
SduI GDGCHC 2 cut(s) 678, 1142
SfaNI GCATC 2 cut(s) 206, 415
SfuI TTCGAA 1 cut(s) 475
SmiMI CAYNNNNRTG 2 cut(s) 308, 754
SmlI CTYRAG 1 cut(s) 128
SmoI CTYRAG 1 cut(s) 128
SnaBI TACGTA 1 cut(s) 608
SseBI AGGCCT 2 cut(s) 1024, 1165
SsiI CCGC 2 cut(s) 1151, 1490
SspI AATATT 2 cut(s) 95, 566
SspMI CTAG 8 cut(s) 17, 534, 648, 659, 1161, 1283, 1337, 1437
StuI AGGCCT 2 cut(s) 1024, 1165
StyD4I CCNGG 3 cut(s) 681, 858, 1564
StyI CCWWGG 3 cut(s) 242, 456, 705
TaaI ACNGT 3 cut(s) 472, 743, 873
TaiI ACGT 3 cut(s) 199, 610, 848
TaqI TCGA 3 cut(s) 475, 1330, 1384
TatI WGTACW 1 cut(s) 1171
TauI GCSGC 1 cut(s) 1154
Tru1I TTAA 6 cut(s) 12, 129, 437, 735, 1068, 1191
Tru9I TTAA 6 cut(s) 12, 129, 437, 735, 1068, 1191
TscAI CASTG 1 cut(s) 962
TseI GCWGC 2 cut(s) 653, 1289
TspDTI ATGAA 4 cut(s) 103, 531, 606, 1226
TspGWI ACGGA 2 cut(s) 914, 1265
TspRI CASTG 1 cut(s) 962
Vha464I CTTAAG 1 cut(s) 128
VspI ATTAAT 3 cut(s) 437, 1068, 1191
XapI RAATTY 2 cut(s) 989, 1332
XbaI TCTAGA 1 cut(s) 1336
XceI RCATGY 3 cut(s) 402, 731, 1178
XmiI GTMKAC 1 cut(s) 253
XspI CTAG 8 cut(s) 17, 534, 648, 659, 1161, 1283, 1337, 1437
Zsp2I ATGCAT 3 cut(s) 6, 751, 948
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.