zinc finger
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G27580 AT2G27580 |
| fragaria_vesca | FvH4_3g24650 |
| malus_domestica | MD03G1142300.v1.1 MD11G1162800.v1.1 |
| prunus_persica | Prupe.6G127400_v2.0.a1 |
| pyrus_communis | pycom03g09700 |
| rosa_chinensis | RchiOBHm_Chr5g0044211 |
| rosa_laevigata | RLG00000034253 |
| rosa_multiflora | Rmu_sc0000776.1_g000081 Rmu_sc0002731.1_g000003 |
| rosa_roxburghii | Rroxscaffold_1G00036830 |
| rosa_rugosa | Rorug05G0211700 |
| rosa_samantha | Rh5BG304100 Rh5DG312800 |
| rosa_wichuraiana | Rw5G027460 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 260 |
| AccII | CGCG | 2 cut(s) | 330, 392 |
| AclWI | GGATC | 1 cut(s) | 293 |
| AfaI | GTAC | 1 cut(s) | 389 |
| AgsI | TTSAA | 4 cut(s) | 23, 110, 239, 421 |
| AluBI | AGCT | 4 cut(s) | 71, 218, 470, 478 |
| AluI | AGCT | 4 cut(s) | 71, 218, 470, 478 |
| AlwI | GGATC | 1 cut(s) | 293 |
| ApeKI | GCWGC | 2 cut(s) | 176, 179 |
| AspLEI | GCGC | 2 cut(s) | 176, 330 |
| AspS9I | GGNCC | 1 cut(s) | 287 |
| AsuII | TTCGAA | 1 cut(s) | 224 |
| AvaII | GGWCC | 1 cut(s) | 287 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 55, 87 |
| BbsI | GAAGAC | 1 cut(s) | 177 |
| BbvI | GCAGC | 2 cut(s) | 163, 166 |
| BccI | CCATC | 2 cut(s) | 278, 421 |
| BceAI | ACGGC | 1 cut(s) | 152 |
| BfoI | RGCGCY | 1 cut(s) | 177 |
| BglII | AGATCT | 1 cut(s) | 103 |
| BisI | GCNGC | 7 cut(s) | 165, 177, 180, 261, 264, 293, 326 |
| BlsI | GCNGC | 7 cut(s) | 166, 178, 181, 262, 265, 294, 327 |
| Bme18I | GGWCC | 1 cut(s) | 287 |
| BmgT120I | GGNCC | 1 cut(s) | 287 |
| BpiI | GAAGAC | 1 cut(s) | 177 |
| BpmI | CTGGAG | 1 cut(s) | 198 |
| Bpu10I | CCTNAGC | 1 cut(s) | 160 |
| Bpu14I | TTCGAA | 1 cut(s) | 224 |
| BsaWI | WCCGGW | 1 cut(s) | 271 |
| BseGI | GGATG | 2 cut(s) | 289, 432 |
| BseRI | GAGGAG | 1 cut(s) | 290 |
| BseXI | GCAGC | 2 cut(s) | 163, 166 |
| Bsh1236I | CGCG | 2 cut(s) | 330, 392 |
| BsiSI | CCGG | 1 cut(s) | 272 |
| BslFI | GGGAC | 1 cut(s) | 391 |
| BsmFI | GGGAC | 1 cut(s) | 391 |
| Bsp119I | TTCGAA | 1 cut(s) | 224 |
| Bsp143I | GATC | 3 cut(s) | 103, 298, 441 |
| BspFNI | CGCG | 2 cut(s) | 330, 392 |
| BspPI | GGATC | 1 cut(s) | 293 |
| BspT104I | TTCGAA | 1 cut(s) | 224 |
| BsrBI | CCGCTC | 1 cut(s) | 260 |
| BssMI | GATC | 3 cut(s) | 103, 298, 441 |
| Bst6I | CTCTTC | 1 cut(s) | 133 |
| BstBI | TTCGAA | 1 cut(s) | 224 |
| BstDEI | CTNAG | 1 cut(s) | 160 |
| BstF5I | GGATG | 2 cut(s) | 289, 432 |
| BstFNI | CGCG | 2 cut(s) | 330, 392 |
| BstH2I | RGCGCY | 1 cut(s) | 177 |
| BstHHI | GCGC | 2 cut(s) | 176, 330 |
| BstKTI | GATC | 3 cut(s) | 106, 301, 444 |
| BstMBI | GATC | 3 cut(s) | 103, 298, 441 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 143, 173 |
| BstNSI | RCATGY | 1 cut(s) | 146 |
| BstUI | CGCG | 2 cut(s) | 330, 392 |
| BstV1I | GCAGC | 2 cut(s) | 163, 166 |
| BstV2I | GAAGAC | 1 cut(s) | 177 |
| BstX2I | RGATCY | 2 cut(s) | 103, 298 |
| BstYI | RGATCY | 2 cut(s) | 103, 298 |
| BtsCI | GGATG | 2 cut(s) | 289, 432 |
| CfoI | GCGC | 2 cut(s) | 176, 330 |
| Cfr13I | GGNCC | 1 cut(s) | 287 |
| CseI | GACGC | 2 cut(s) | 171, 388 |
| Csp6I | GTAC | 1 cut(s) | 388 |
| CviAII | CATG | 2 cut(s) | 143, 401 |
| CviJI | RGCY | 7 cut(s) | 54, 71, 164, 218, 266, 470, 478 |
| CviKI_1 | RGCY | 7 cut(s) | 54, 71, 164, 218, 266, 470, 478 |
| CviQI | GTAC | 1 cut(s) | 388 |
| DdeI | CTNAG | 1 cut(s) | 160 |
| DpnI | GATC | 3 cut(s) | 105, 300, 443 |
| DpnII | GATC | 3 cut(s) | 103, 298, 441 |
| Eam1104I | CTCTTC | 1 cut(s) | 133 |
| EarI | CTCTTC | 1 cut(s) | 133 |
| EciI | GGCGGA | 4 cut(s) | 20, 198, 279, 296 |
| Eco47I | GGWCC | 1 cut(s) | 287 |
| FaeI | CATG | 2 cut(s) | 146, 404 |
| FaiI | YATR | 4 cut(s) | 37, 144, 384, 402 |
| FaqI | GGGAC | 1 cut(s) | 391 |
| FatI | CATG | 2 cut(s) | 142, 400 |
| FauI | CCCGC | 1 cut(s) | 368 |
| Fnu4HI | GCNGC | 7 cut(s) | 165, 177, 180, 261, 264, 293, 326 |
| FokI | GGATG | 2 cut(s) | 296, 439 |
| Fsp4HI | GCNGC | 7 cut(s) | 165, 177, 180, 261, 264, 293, 326 |
| GlaI | GCGC | 2 cut(s) | 175, 329 |
| GluI | GCNGC | 7 cut(s) | 165, 177, 180, 261, 264, 293, 326 |
| GsuI | CTGGAG | 1 cut(s) | 198 |
| HaeII | RGCGCY | 1 cut(s) | 177 |
| HapII | CCGG | 1 cut(s) | 272 |
| HgaI | GACGC | 2 cut(s) | 171, 388 |
| HhaI | GCGC | 2 cut(s) | 176, 330 |
| Hin1II | CATG | 2 cut(s) | 146, 404 |
| Hin6I | GCGC | 2 cut(s) | 174, 328 |
| HinP1I | GCGC | 2 cut(s) | 174, 328 |
| HindIII | AAGCTT | 1 cut(s) | 476 |
| HinfI | GANTC | 3 cut(s) | 221, 336, 454 |
| HpaII | CCGG | 1 cut(s) | 272 |
| Hpy188I | TCNGA | 4 cut(s) | 62, 250, 303, 459 |
| Hpy188III | TCNNGA | 3 cut(s) | 23, 101, 116 |
| HpyAV | CCTTC | 1 cut(s) | 427 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 143, 173 |
| HpyF3I | CTNAG | 1 cut(s) | 160 |
| Hsp92II | CATG | 2 cut(s) | 146, 404 |
| HspAI | GCGC | 2 cut(s) | 174, 328 |
| Kzo9I | GATC | 3 cut(s) | 103, 298, 441 |
| LmnI | GCTCC | 1 cut(s) | 394 |
| LpnPI | CCDG | 2 cut(s) | 228, 285 |
| Lsp1109I | GCAGC | 2 cut(s) | 163, 166 |
| MalI | GATC | 3 cut(s) | 105, 300, 443 |
| MbiI | CCGCTC | 1 cut(s) | 260 |
| MboI | GATC | 3 cut(s) | 103, 298, 441 |
| MboII | GAAGA | 5 cut(s) | 20, 49, 98, 120, 177 |
| MfeI | CAATTG | 1 cut(s) | 46 |
| MflI | RGATCY | 2 cut(s) | 103, 298 |
| MluCI | AATT | 1 cut(s) | 46 |
| MnlI | CCTC | 5 cut(s) | 199, 216, 222, 268, 271 |
| MslI | CAYNNNNRTG | 1 cut(s) | 34 |
| MspA1I | CMGCKG | 1 cut(s) | 218 |
| MspI | CCGG | 1 cut(s) | 272 |
| MunI | CAATTG | 1 cut(s) | 46 |
| MvnI | CGCG | 2 cut(s) | 330, 392 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 143, 173 |
| NdeII | GATC | 3 cut(s) | 103, 298, 441 |
| NlaIII | CATG | 2 cut(s) | 146, 404 |
| NspI | RCATGY | 1 cut(s) | 146 |
| NspV | TTCGAA | 1 cut(s) | 224 |
| PfeI | GAWTC | 3 cut(s) | 221, 336, 454 |
| PkrI | GCNGC | 7 cut(s) | 166, 178, 181, 262, 265, 294, 327 |
| PspPI | GGNCC | 1 cut(s) | 287 |
| PsuI | RGATCY | 2 cut(s) | 103, 298 |
| PvuII | CAGCTG | 1 cut(s) | 218 |
| RsaI | GTAC | 1 cut(s) | 389 |
| RsaNI | GTAC | 1 cut(s) | 388 |
| RseI | CAYNNNNRTG | 1 cut(s) | 34 |
| SatI | GCNGC | 7 cut(s) | 165, 177, 180, 261, 264, 293, 326 |
| Sau3AI | GATC | 3 cut(s) | 103, 298, 441 |
| Sau96I | GGNCC | 1 cut(s) | 287 |
| SetI | ASST | 6 cut(s) | 73, 220, 359, 389, 472, 480 |
| SfuI | TTCGAA | 1 cut(s) | 224 |
| SinI | GGWCC | 1 cut(s) | 287 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 34 |
| SmlI | CTYRAG | 1 cut(s) | 479 |
| SmoI | CTYRAG | 1 cut(s) | 479 |
| Sse9I | AATT | 1 cut(s) | 46 |
| TaqI | TCGA | 2 cut(s) | 100, 224 |
| TasI | AATT | 1 cut(s) | 46 |
| TauI | GCSGC | 5 cut(s) | 167, 263, 266, 295, 328 |
| TfiI | GAWTC | 3 cut(s) | 221, 336, 454 |
| TseI | GCWGC | 2 cut(s) | 176, 179 |
| TspDTI | ATGAA | 1 cut(s) | 417 |
| TspGWI | ACGGA | 1 cut(s) | 181 |
| VpaK11BI | GGWCC | 1 cut(s) | 287 |
| XceI | RCATGY | 1 cut(s) | 146 |