Rare lipoprotein A (RlpA)-like double-psi beta-barrel
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G28950 |
| fragaria_vesca | FvH4_3g36410 |
| malus_domestica | MD00G1013600.v1.1 MD03G1090700.v1.1 MD11G1105700.v1.1 |
| prunus_persica | Prupe.6G075100_v2.0.a1 Prupe.6G075100_v2.0.a1 Prupe.6G075100_v2.0.a1 |
| pyrus_communis | pycom03g07260 pycom11g08720 |
| rosa_chinensis | RchiOBHm_Chr5g0065301 |
| rosa_laevigata | RLG00000035779 |
| rosa_multiflora | Rmu_co8233643.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00015890 Rroxscaffold_6G00414450 |
| rosa_rugosa | Rorug05G0371100 |
| rosa_samantha | Rh3AG128600 Rh5AG428900 Rh5BG444200 Rh5CG466400 Rh5DG456400 |
| rosa_wichuraiana | Rw5G040260 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 707 |
| AccB1I | GGYRCC | 2 cut(s) | 282, 551 |
| AciI | CCGC | 3 cut(s) | 200, 460, 568 |
| AclWI | GGATC | 1 cut(s) | 266 |
| AcuI | CTGAAG | 2 cut(s) | 75, 748 |
| AcyI | GRCGYC | 2 cut(s) | 552, 704 |
| AgsI | TTSAA | 2 cut(s) | 223, 303 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 609 |
| AjnI | CCWGG | 1 cut(s) | 67 |
| AluBI | AGCT | 4 cut(s) | 152, 237, 256, 699 |
| AluI | AGCT | 4 cut(s) | 152, 237, 256, 699 |
| Alw21I | GWGCWC | 1 cut(s) | 258 |
| Alw26I | GTCTC | 1 cut(s) | 457 |
| AlwI | GGATC | 1 cut(s) | 266 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 771 |
| AspLEI | GCGC | 1 cut(s) | 554 |
| BanI | GGYRCC | 2 cut(s) | 282, 551 |
| BanII | GRGCYC | 1 cut(s) | 258 |
| Bbv12I | GWGCWC | 1 cut(s) | 258 |
| BceAI | ACGGC | 2 cut(s) | 213, 228 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 453, 487 |
| BciT130I | CCWGG | 1 cut(s) | 69 |
| BcoDI | GTCTC | 1 cut(s) | 457 |
| BfaI | CTAG | 5 cut(s) | 267, 351, 381, 533, 572 |
| BfoI | RGCGCY | 1 cut(s) | 555 |
| BisI | GCNGC | 2 cut(s) | 201, 569 |
| BlpI | GCTNAGC | 1 cut(s) | 345 |
| BlsI | GCNGC | 2 cut(s) | 202, 570 |
| Bme1390I | CCNGG | 1 cut(s) | 69 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 609 |
| BmiI | GGNNCC | 2 cut(s) | 284, 553 |
| BmrFI | CCNGG | 1 cut(s) | 69 |
| BmrI | ACTGGG | 1 cut(s) | 628 |
| BmsI | GCATC | 1 cut(s) | 118 |
| BmuI | ACTGGG | 1 cut(s) | 628 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 345 |
| BpuEI | CTTGAG | 1 cut(s) | 401 |
| BsaHI | GRCGYC | 2 cut(s) | 552, 704 |
| BsaJI | CCNNGG | 2 cut(s) | 67, 178 |
| Bse1I | ACTGG | 2 cut(s) | 623, 635 |
| Bse3DI | GCAATG | 2 cut(s) | 12, 714 |
| BseBI | CCWGG | 1 cut(s) | 69 |
| BseDI | CCNNGG | 2 cut(s) | 67, 178 |
| BseGI | GGATG | 1 cut(s) | 606 |
| BseMI | GCAATG | 2 cut(s) | 12, 714 |
| BseMII | CTCAG | 3 cut(s) | 359, 417, 657 |
| BseNI | ACTGG | 2 cut(s) | 623, 635 |
| BseRI | GAGGAG | 2 cut(s) | 162, 498 |
| BshNI | GGYRCC | 2 cut(s) | 282, 551 |
| BsiHKAI | GWGCWC | 1 cut(s) | 258 |
| BsiSI | CCGG | 4 cut(s) | 438, 475, 555, 722 |
| BslFI | GGGAC | 2 cut(s) | 431, 636 |
| BsmAI | GTCTC | 1 cut(s) | 457 |
| BsmBI | CGTCTC | 1 cut(s) | 457 |
| BsmFI | GGGAC | 2 cut(s) | 431, 636 |
| Bsp1286I | GDGCHC | 1 cut(s) | 258 |
| Bsp143I | GATC | 3 cut(s) | 271, 394, 420 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 345 |
| BspACI | CCGC | 3 cut(s) | 200, 460, 568 |
| BspCNI | CTCAG | 3 cut(s) | 358, 418, 656 |
| BspLI | GGNNCC | 2 cut(s) | 284, 553 |
| BspPI | GGATC | 1 cut(s) | 266 |
| BspT107I | GGYRCC | 2 cut(s) | 282, 551 |
| BsrDI | GCAATG | 2 cut(s) | 12, 714 |
| BsrI | ACTGG | 2 cut(s) | 623, 635 |
| BssECI | CCNNGG | 2 cut(s) | 67, 178 |
| BssMI | GATC | 3 cut(s) | 271, 394, 420 |
| BssNI | GRCGYC | 2 cut(s) | 552, 704 |
| BssT1I | CCWWGG | 1 cut(s) | 178 |
| Bst2UI | CCWGG | 1 cut(s) | 69 |
| Bst4CI | ACNGT | 3 cut(s) | 119, 509, 692 |
| Bst6I | CTCTTC | 1 cut(s) | 473 |
| BstACI | GRCGYC | 2 cut(s) | 552, 704 |
| BstC8I | GCNNGC | 1 cut(s) | 550 |
| BstDEI | CTNAG | 3 cut(s) | 345, 426, 643 |
| BstF5I | GGATG | 1 cut(s) | 606 |
| BstH2I | RGCGCY | 1 cut(s) | 555 |
| BstHHI | GCGC | 1 cut(s) | 554 |
| BstKTI | GATC | 3 cut(s) | 274, 397, 423 |
| BstMAI | GTCTC | 1 cut(s) | 457 |
| BstMBI | GATC | 3 cut(s) | 271, 394, 420 |
| BstNI | CCWGG | 1 cut(s) | 69 |
| BstSCI | CCNGG | 1 cut(s) | 67 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 185 |
| BtsCI | GGATG | 1 cut(s) | 606 |
| BtsI | GCAGTG | 2 cut(s) | 312, 691 |
| BtsIMutI | CAGTG | 2 cut(s) | 312, 691 |
| Cac8I | GCNNGC | 1 cut(s) | 550 |
| CaiI | CAGNNNCTG | 1 cut(s) | 771 |
| CfoI | GCGC | 1 cut(s) | 554 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 67, 102 |
| CviAII | CATG | 3 cut(s) | 471, 607, 751 |
| DdeI | CTNAG | 3 cut(s) | 345, 426, 643 |
| DinI | GGCGCC | 1 cut(s) | 553 |
| DpnI | GATC | 3 cut(s) | 273, 396, 422 |
| DpnII | GATC | 3 cut(s) | 271, 394, 420 |
| DriI | GACNNNNNGTC | 1 cut(s) | 609 |
| Eam1104I | CTCTTC | 1 cut(s) | 473 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 609 |
| EarI | CTCTTC | 1 cut(s) | 473 |
| EciI | GGCGGA | 1 cut(s) | 449 |
| Ecl136II | GAGCTC | 1 cut(s) | 256 |
| Eco130I | CCWWGG | 1 cut(s) | 178 |
| Eco24I | GRGCYC | 1 cut(s) | 258 |
| Eco53kI | GAGCTC | 1 cut(s) | 256 |
| Eco57I | CTGAAG | 2 cut(s) | 75, 748 |
| EcoICRI | GAGCTC | 1 cut(s) | 256 |
| EcoRII | CCWGG | 1 cut(s) | 67 |
| EcoT14I | CCWWGG | 1 cut(s) | 178 |
| EcoT38I | GRGCYC | 1 cut(s) | 258 |
| EgeI | GGCGCC | 1 cut(s) | 553 |
| EheI | GGCGCC | 1 cut(s) | 553 |
| ErhI | CCWWGG | 1 cut(s) | 178 |
| Esp3I | CGTCTC | 1 cut(s) | 457 |
| FaeI | CATG | 3 cut(s) | 474, 610, 754 |
| FaqI | GGGAC | 2 cut(s) | 431, 636 |
| FatI | CATG | 3 cut(s) | 470, 606, 750 |
| Fnu4HI | GCNGC | 2 cut(s) | 201, 569 |
| FokI | GGATG | 1 cut(s) | 613 |
| FriOI | GRGCYC | 1 cut(s) | 258 |
| Fsp4HI | GCNGC | 2 cut(s) | 201, 569 |
| FspBI | CTAG | 5 cut(s) | 267, 351, 381, 533, 572 |
| GlaI | GCGC | 1 cut(s) | 553 |
| GluI | GCNGC | 2 cut(s) | 201, 569 |
| HaeII | RGCGCY | 1 cut(s) | 555 |
| HapII | CCGG | 4 cut(s) | 438, 475, 555, 722 |
| HhaI | GCGC | 1 cut(s) | 554 |
| Hin1I | GRCGYC | 2 cut(s) | 552, 704 |
| Hin1II | CATG | 3 cut(s) | 474, 610, 754 |
| Hin6I | GCGC | 1 cut(s) | 552 |
| HinP1I | GCGC | 1 cut(s) | 552 |
| HinfI | GANTC | 5 cut(s) | 63, 441, 610, 675, 768 |
| HpaII | CCGG | 4 cut(s) | 438, 475, 555, 722 |
| Hpy166II | GTNNAC | 3 cut(s) | 76, 193, 498 |
| Hpy188I | TCNGA | 6 cut(s) | 55, 127, 336, 744, 767, 773 |
| Hpy188III | TCNNGA | 2 cut(s) | 135, 418 |
| Hpy8I | GTNNAC | 3 cut(s) | 76, 193, 498 |
| Hpy99I | CGWCG | 3 cut(s) | 548, 706, 709 |
| HpyAV | CCTTC | 1 cut(s) | 309 |
| HpyCH4III | ACNGT | 3 cut(s) | 119, 509, 692 |
| HpyCH4IV | ACGT | 2 cut(s) | 543, 704 |
| HpyCH4V | TGCA | 1 cut(s) | 47 |
| HpyF3I | CTNAG | 3 cut(s) | 345, 426, 643 |
| HpySE526I | ACGT | 2 cut(s) | 543, 704 |
| Hsp92I | GRCGYC | 2 cut(s) | 552, 704 |
| Hsp92II | CATG | 3 cut(s) | 474, 610, 754 |
| HspAI | GCGC | 1 cut(s) | 552 |
| KasI | GGCGCC | 1 cut(s) | 551 |
| Kzo9I | GATC | 3 cut(s) | 271, 394, 420 |
| LmnI | GCTCC | 2 cut(s) | 149, 724 |
| LweI | GCATC | 1 cut(s) | 118 |
| MaeI | CTAG | 5 cut(s) | 267, 351, 381, 533, 572 |
| MaeII | ACGT | 2 cut(s) | 543, 704 |
| MaeIII | GTNAC | 8 cut(s) | 164, 353, 371, 535, 614, 660, 676, 686 |
| MalI | GATC | 3 cut(s) | 273, 396, 422 |
| MboI | GATC | 3 cut(s) | 271, 394, 420 |
| MboII | GAAGA | 2 cut(s) | 298, 490 |
| MhlI | GDGCHC | 1 cut(s) | 258 |
| MluCI | AATT | 3 cut(s) | 39, 322, 727 |
| Mly113I | GGCGCC | 1 cut(s) | 552 |
| MlyI | GAGTC | 2 cut(s) | 619, 684 |
| MnlI | CCTC | 6 cut(s) | 140, 342, 387, 396, 476, 479 |
| MseI | TTAA | 2 cut(s) | 206, 522 |
| MspI | CCGG | 4 cut(s) | 438, 475, 555, 722 |
| MspR9I | CCNGG | 1 cut(s) | 69 |
| MvaI | CCWGG | 1 cut(s) | 69 |
| NarI | GGCGCC | 1 cut(s) | 552 |
| NdeII | GATC | 3 cut(s) | 271, 394, 420 |
| NlaIII | CATG | 3 cut(s) | 474, 610, 754 |
| NlaIV | GGNNCC | 2 cut(s) | 284, 553 |
| NmeAIII | GCCGAG | 1 cut(s) | 488 |
| NmuCI | GTSAC | 5 cut(s) | 353, 535, 660, 676, 686 |
| PfeI | GAWTC | 2 cut(s) | 63, 441 |
| PkrI | GCNGC | 2 cut(s) | 202, 570 |
| PleI | GAGTC | 2 cut(s) | 618, 683 |
| PluTI | GGCGCC | 1 cut(s) | 555 |
| PpsI | GAGTC | 2 cut(s) | 618, 683 |
| Psp124BI | GAGCTC | 1 cut(s) | 258 |
| Psp6I | CCWGG | 1 cut(s) | 67 |
| PspGI | CCWGG | 1 cut(s) | 67 |
| PspN4I | GGNNCC | 2 cut(s) | 284, 553 |
| PstNI | CAGNNNCTG | 1 cut(s) | 771 |
| SacI | GAGCTC | 1 cut(s) | 258 |
| SaqAI | TTAA | 2 cut(s) | 206, 522 |
| SatI | GCNGC | 2 cut(s) | 201, 569 |
| Sau3AI | GATC | 3 cut(s) | 271, 394, 420 |
| SchI | GAGTC | 2 cut(s) | 619, 684 |
| ScrFI | CCNGG | 1 cut(s) | 69 |
| SduI | GDGCHC | 1 cut(s) | 258 |
| SetI | ASST | 9 cut(s) | 154, 239, 258, 388, 497, 546, 577, 701, 707 |
| SfaNI | GCATC | 1 cut(s) | 118 |
| SfoI | GGCGCC | 1 cut(s) | 553 |
| SmlI | CTYRAG | 1 cut(s) | 416 |
| SmoI | CTYRAG | 1 cut(s) | 416 |
| Sse9I | AATT | 3 cut(s) | 39, 322, 727 |
| SsiI | CCGC | 3 cut(s) | 200, 460, 568 |
| SspDI | GGCGCC | 1 cut(s) | 551 |
| SspMI | CTAG | 5 cut(s) | 267, 351, 381, 533, 572 |
| SstI | GAGCTC | 1 cut(s) | 258 |
| StyD4I | CCNGG | 1 cut(s) | 67 |
| StyI | CCWWGG | 1 cut(s) | 178 |
| TaaI | ACNGT | 3 cut(s) | 119, 509, 692 |
| TaiI | ACGT | 2 cut(s) | 546, 707 |
| TaqI | TCGA | 1 cut(s) | 701 |
| TasI | AATT | 3 cut(s) | 39, 322, 727 |
| TauI | GCSGC | 2 cut(s) | 203, 571 |
| TfiI | GAWTC | 2 cut(s) | 63, 441 |
| Tru1I | TTAA | 2 cut(s) | 206, 522 |
| Tru9I | TTAA | 2 cut(s) | 206, 522 |
| TscAI | CASTG | 2 cut(s) | 319, 691 |
| TseFI | GTSAC | 5 cut(s) | 353, 535, 660, 676, 686 |
| Tsp45I | GTSAC | 5 cut(s) | 353, 535, 660, 676, 686 |
| TspDTI | ATGAA | 2 cut(s) | 298, 739 |
| TspGWI | ACGGA | 1 cut(s) | 503 |
| TspRI | CASTG | 2 cut(s) | 319, 691 |
| XspI | CTAG | 5 cut(s) | 267, 351, 381, 533, 572 |
| ZraI | GACGTC | 1 cut(s) | 705 |