Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0007152

Physical Location & Seq

Genomic Coordinates Reverse (-)

13353748 .. 13359750

Gene Structure 6003 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G31320.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2952 bp

ATGGCAAGCCCACATAAGCCGTGGAGGGCGGAGTATGCAAAGTCGTCGAGGTCTTCATGTAAAACTTGCAAGTCCGTCATTAACAAGGAGAACTTTCGTCTTGGAAAGTTGGTTCAATCTACTCACTTCGATGGCATCATGCCCATGTGGAACCATGCTTCTTGTATACTAAAGAAGACGAAGCAGATAAAATCAGTTGATGATGTTGAAGGCATAGAATCACTTCGTTGGGAAGATCAGCAAAAGATTAGAAAATATGTCGAATCTGGAGCAGGGAGTAACACAAGCACAAGCACAGGCACAAGCACGAGCAGTACCGCTAATAATGCCAAACTAGAATATGGGATTGAAGTGTCACAAACTTCTCGTGCCGGTTGCAGAAAGTGTAGCGAAAAGATCTTGAAAGGAGAGGTACGTATATTCTCCAAGCCTGAAGGCCCGGGTAACAAAGGTTTGATGTGGCATCACGCTAAATGTTTCCTTGAAATGTCTTCCTCTACTGAACTGGAAAGTTTGTCTGGATGGAGAAGTATACCAGACTCAGACCAAGAAGCTCTTCTTCCCTTAGTGAAGAAAGCTCTGCCGGCAGCCAAAACTGAGACAGCAGAAGCACGTCAAACAAATTCAAGAGCAGGCACAAAACGAAAAAATGATTCTGTTGATAACGAGAAGTCGAAACTAGCAAAAAGTAGTTTTGACATGTCTACAAGTGGTGCTTTACAACCTTGTAGCAAAGAAAAGGAAATGGAGGCCCAAACTAAGGAATTGTGGGACCTGAAGGATGATCTGAAAAAATATGTAACATCAGCTGAGTTGCGGGAAATGCTTGAAGTAAATGAACAAAGTACAAGAGGATCTGAACTTGATCTGCGTGATAAATGTGCTGATGGCATGATGTTTGGCCCACTCGCTCTCTGCCCAATGTGCTCTGGGCATCTTTCTTTCTCCGGAGGACTTTACCGATGCCATGGATACATCTCAGAATGGAGCAAATGTTCTCATTCCACTTTGGATCCAGACCGCATCAAAGGGAAGTGGAAAATCCCTGACGAAACAGAAAATCAATTCCTTCTGAAGTGGAATAAGTCTCAAAAGAGTGTGAAGCCAAAACGTATTCTGCGTCCTGTATTGTCTGGCGAGACATCTCAGGGTCAAGGTTCTAAAGATGCAACTGACTCCTCAAGGAGTGAAAGGCTAGCAGATCTTAAAGTTTCAATTGCTGGAAATACTAAGGAAAGGCAACCATGGAAGAAGAGAATTGAGGAAGCTGGTGCAGAGTTTCATGCTAATGTTAAAAAAGGTACAAGCTGTTTGGTTGTTTGTGGACTGACAGATATCAGAGACGCTGAAATGAGAAAGGCAAGGAGGATGAAAGTGGCAATCGTGAGAGAGGATTATTTGGTTGATTGTTTTAAAAAACAGAGGAAACTTCCATTTGACAAGTACAAAATTGAAGACACTAGTGAGAGCCTTGTCACTGTTAAAGTAAAAGGACGAAGCGCTGTGCATGAAGCGTCTGGCCTCCAAGAGCACTGTCACATTCTTGAAGATGGGAACAGTATCTATAACACAACTCTGAGCATGTCTGATCTCTCTACCGGTATCAATAGTTATTACATACTCCAGATAATCCAAGAAGATAAAGGTTCAGATTGTTACGTATTTCGTAAATGGGGCCGAGTTGGAAATGAAAAGATTGGTGGTAACAAAGTGGAGGAAATGTCAAAGTCTGATGCGGTTCACGAATTCAAACGTCTATTTCTTGAAAAAACCGGAAACACATGGGAATCTTGGGAACAAAAAACGAATTTCCAGAAACAACCTGGAAAATTTCTCCCGTTGGACATTGATTATGGAGTTAATAAGCAAGTAGCCAAAAAAGAGCCATTTCAGACCAGTAGCAACCTTGCTCCATCATTAATAGAATTGATGAAGATGCTTTTTGATGTGGAAACTTACAGATCTGCAATGATGGAGTTCGAGATAAATATGTCAGAGATGCCACTTGGGAAGCTCAGCAAACATAATATACAGAAGGGTTTTGAGGCATTGACGGAGATACAGAGGCTATTGACTGAAAGCGACCCCCAGCCTACTATGAAAGAAAGCTTGCTTGTTGATGCTAGTAACAGATTTTTTACCATGATCCCTTCTATTCATCCTCATATTATCCGAGATGAAGATGACTTTAAGTCAAAGGTGAAAATGCTCGAGGCTCTGCAGGATATCGAAATAGCTTCAAGAATAGTTGGCTTTGATGTTGATAGCACCGAATCTCTTGATGATAAGTATAAGAAGCTGCATTGCGATATCTCACCACTTCCTCATGATAGCGAAGATTATCGATTAATCGAGAAGTATCTTAACACAACTCATGCCCCAACGCATACAGAGTGGAGTCTTGAGCTAGAGGAAGTTTTTGCTCTTGAAAGAGAAGGAGAGTTTGATAAATATGCTCCCCACAGAGAAAAACTTGGCAATAAGATGCTCCTATGGCATGGTTCTCGATTAACGAATTTTGTTGGAATATTGAACCAAGGACTGAGAATTGCACCTCCAGAAGCTCCTGCTACTGGTTACATGTTTGGAAAAGGGATATACTTTGCTGACCTTGTCAGTAAAAGTGCTCAGTACTGCTACACTTGTAAGAAAAATCCGGTGGGTCTAATGCTTCTGAGTGAAGTTGCATTGGGAGAAATACATGAGCTAACAAAAGCTAAGTATATGGATAAACCTCCGAGAGGGAAACACTCGACCAAAGGGCTCGGCAAGAAAGTGCCTCAAGATTCCGAGTTTGCCAAGTGGAGAGGTGATGTGACTGTTCCCTGTGGAAAACCTGTTTCATCAAAGGTCAAGGCTTCTGAGCTTATGTACAATGAGTATATCGTCTACGATACAGCCCAGGTGAAGTTGCAGTTCTTGTTGAAAGTAAGGTTTAAGCACAAGAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0003909 GO:0003910 GO:0003950 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006266 GO:0006271 GO:0006273 GO:0006281 GO:0006464 GO:0006471 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006979 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009719 GO:0009725 GO:0009737 GO:0009987 GO:0010033 GO:0016070 GO:0016740 GO:0016757 GO:0016763 GO:0016874 GO:0016886 GO:0019538 GO:0022616 GO:0033554 GO:0033993 GO:0034641 GO:0034645 GO:0036211 GO:0042221 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0046483 GO:0050896 GO:0051103 GO:0051716 GO:0071704 GO:0090304 GO:0097305 GO:0140097 GO:1901360 GO:1901564 GO:1901576 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko03410 ko04210 ko04212 ko04214 ko04217 map03410 map04210 map04212 map04214 map04217

Pfam Domains

Protein Families

BRCT PADR1 PARP PARP_reg WGR zf-PARP

Protein Analysis

983

Amino Acids

111.23

Weight (kDa)

8.8

Isoelectric Point (pI)

44.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-PARP	PF00645	11 - 87	3.3e-21	Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
zf-PARP	PF00645	117 - 186	7.8e-12	Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
PADR1_N	PF21728	244 - 301	3.1e-20	PADR1, N-terminal helical domain
Zn_ribbon_PADR1	PF08063	303 - 342	6.1e-15	PADR1 domain, zinc ribbon fold
BRCT	PF00533	397 - 471	8.5e-09	BRCA1 C Terminus (BRCT) domain
WGR	PF05406	522 - 600	3.5e-16	WGR domain
PARP_reg	PF02877	634 - 764	8.9e-35	Poly(ADP-ribose) polymerase, regulatory domain
PARP	PF00644	778 - 979	9.1e-82	Poly(ADP-ribose) polymerase catalytic domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0007152)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G31320
fragaria_vesca	FvH4_2g21980 FvH4_2g21980 FvH4_2g21980
malus_domestica	MD05G1201000.v1.1 MD10G1187800.v1.1
prunus_persica	Prupe.8G227600_v2.0.a1 Prupe.8G227600_v2.0.a1
pyrus_communis	pycom05g18780 pycom10g16230
rosa_chinensis	RchiOBHm_Chr6g0288861
rosa_laevigata	RLG00000012360
rosa_multiflora	Rmu_sc0005314.1_g000009
rosa_roxburghii	Rroxscaffold_7G00179830
rosa_rugosa	Rorug06G0198600 Rorug06G0198600 Rorug06G0198600 Rorug06G0198700 Rorug06G0198800 Rorug06G0198900 Rorug06G0198900
rosa_samantha	Rh6AG310000 Rh6BG315900 Rh6CG323400
rosa_wichuraiana	Rw6G026810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	4 cut(s)	166, 532, 704, 2889
AccIII	TCCGGA	1 cut(s)	947
AciI	CCGC	5 cut(s)	29, 318, 817, 1021, 1736
AclWI	GGATC	4 cut(s)	862, 1007, 1020, 2140
AcsI	RAATTY	5 cut(s)	622, 1745, 1807, 1829, 2515
AcuI	CTGAAG	3 cut(s)	453, 797, 1094
AfaI	GTAC	7 cut(s)	316, 414, 847, 1303, 1445, 2633, 2873
AfeI	AGCGCT	1 cut(s)	1501
AfiI	CCNNNNNNNGG	3 cut(s)	760, 2573, 2741
AflIII	ACRYGT	2 cut(s)	699, 2580
AgeI	ACCGGT	1 cut(s)	1598
AhdI	GACNNNNNGTC	1 cut(s)	2191
AhlI	ACTAGT	1 cut(s)	1460
AjiI	CACGTC	1 cut(s)	614
AjnI	CCWGG	2 cut(s)	1822, 2901
AjuI	GAANNNNNNNTTGG	2 cut(s)	540, 572
AloI	GAACNNNNNNTCC	4 cut(s)	96, 128, 979, 1011
Alw21I	GWGCWC	3 cut(s)	929, 1533, 2629
Alw26I	GTCTC	4 cut(s)	593, 1092, 1133, 1335
AlwI	GGATC	4 cut(s)	862, 1007, 1020, 2140
Ama87I	CYCGRG	2 cut(s)	439, 2210
Aor13HI	TCCGGA	1 cut(s)	947
Aor51HI	AGCGCT	1 cut(s)	1501
AoxI	GGCC	5 cut(s)	436, 750, 901, 1519, 1675
ApeKI	GCWGC	2 cut(s)	587, 2299
ApoI	RAATTY	5 cut(s)	622, 1745, 1807, 1829, 2515
AseI	ATTAAT	2 cut(s)	1919, 2348
AsiGI	ACCGGT	1 cut(s)	1598
Asp700I	GAANNNNTTC	2 cut(s)	222, 555
AspLEI	GCGC	1 cut(s)	1502
AspS9I	GGNCC	5 cut(s)	437, 751, 772, 902, 1675
AsuC2I	CCSGG	2 cut(s)	440, 441
AsuHPI	GGTGA	4 cut(s)	2212, 2307, 2822, 2917
AsuNHI	GCTAGC	1 cut(s)	1195
AvaI	CYCGRG	2 cut(s)	439, 2210
AvaII	GGWCC	1 cut(s)	772
BamHI	GGATCC	1 cut(s)	1012
BanII	GRGCYC	1 cut(s)	2766
BauI	CACGAG	2 cut(s)	307, 366
BbsI	GAAGAC	4 cut(s)	45, 182, 483, 1461
Bbv12I	GWGCWC	3 cut(s)	929, 1533, 2629
BbvI	GCAGC	2 cut(s)	599, 2286
BccI	CCATC	6 cut(s)	125, 516, 881, 1544, 1921, 1966
BceAI	ACGGC	1 cut(s)	4
BcgI	CGANNNNNNTGC	4 cut(s)	27, 61, 2486, 2520
BciT130I	CCWGG	2 cut(s)	1824, 2903
BciVI	GTATCC	1 cut(s)	965
BcnI	CCSGG	2 cut(s)	440, 441
BcoDI	GTCTC	4 cut(s)	593, 1092, 1133, 1335
BcuI	ACTAGT	1 cut(s)	1460
BfaI	CTAG	6 cut(s)	335, 680, 1196, 1461, 2124, 2408
BfmI	CTRYAG	1 cut(s)	2219
BfoI	RGCGCY	1 cut(s)	1503
BfuI	GTATCC	1 cut(s)	965
BglII	AGATCT	3 cut(s)	396, 1201, 1961
BisI	GCNGC	2 cut(s)	588, 2300
BlpI	GCTNAGC	1 cut(s)	2015
BlsI	GCNGC	2 cut(s)	589, 2301
BmcAI	AGTACT	1 cut(s)	2633
Bme1390I	CCNGG	4 cut(s)	440, 441, 1824, 2903
Bme18I	GGWCC	1 cut(s)	772
BmeRI	GACNNNNNGTC	1 cut(s)	2191
BmeT110I	CYCGRG	2 cut(s)	439, 2210
BmgBI	CACGTC	1 cut(s)	614
BmgT120I	GGNCC	5 cut(s)	437, 751, 772, 902, 1675
BmiI	GGNNCC	4 cut(s)	152, 773, 1014, 1676
BmrFI	CCNGG	4 cut(s)	440, 441, 1824, 2903
BmtI	GCTAGC	1 cut(s)	1199
BpiI	GAAGAC	4 cut(s)	45, 182, 483, 1461
BpmI	CTGGAG	3 cut(s)	288, 1607, 2541
Bpu1102I	GCTNAGC	1 cut(s)	2015
BpuEI	CTTGAG	3 cut(s)	1165, 2423, 2766
BpuMI	CCSGG	2 cut(s)	440, 441
Bsa29I	ATCGAT	1 cut(s)	2344
BsaAI	YACGTR	2 cut(s)	416, 1660
BsaJI	CCNNGG	6 cut(s)	20, 439, 967, 1244, 2536, 2901
BsaWI	WCCGGW	4 cut(s)	947, 1598, 1772, 2656
BsaXI	ACNNNNNCTCC	4 cut(s)	979, 1009, 1706, 1736
Bsc4I	CCNNNNNNNGG	3 cut(s)	760, 2573, 2741
Bse118I	RCCGGY	3 cut(s)	371, 583, 1598
Bse1I	ACTGG	3 cut(s)	510, 1896, 2578
Bse3DI	GCAATG	2 cut(s)	1974, 2302
BseAI	TCCGGA	1 cut(s)	947
BseBI	CCWGG	2 cut(s)	1824, 2903
BseCI	ATCGAT	1 cut(s)	2344
BseDI	CCNNGG	6 cut(s)	20, 439, 967, 1244, 2536, 2901
BseGI	GGATG	4 cut(s)	527, 787, 1374, 2158
BseLI	CCNNNNNNNGG	3 cut(s)	760, 2573, 2741
BseMI	GCAATG	2 cut(s)	1974, 2302
BseNI	ACTGG	3 cut(s)	510, 1896, 2578
BseRI	GAGGAG	1 cut(s)	1168
BseXI	GCAGC	2 cut(s)	599, 2286
BseYI	CCCAGC	1 cut(s)	2088
BsgI	GTGCAG	1 cut(s)	1293
BshFI	GGCC	5 cut(s)	438, 752, 903, 1521, 1677
BshTI	ACCGGT	1 cut(s)	1598
BshVI	ATCGAT	1 cut(s)	2344
BsiHKAI	GWGCWC	3 cut(s)	929, 1533, 2629
BsiHKCI	CYCGRG	2 cut(s)	439, 2210
BsiSI	CCGG	7 cut(s)	372, 440, 584, 948, 1599, 1773, 2657
BslFI	GGGAC	1 cut(s)	785
BslI	CCNNNNNNNGG	3 cut(s)	760, 2573, 2741
BsmAI	GTCTC	4 cut(s)	593, 1092, 1133, 1335
BsmBI	CGTCTC	1 cut(s)	1335
BsmFI	GGGAC	1 cut(s)	785
BsnI	GGCC	5 cut(s)	438, 752, 903, 1521, 1677
BsoBI	CYCGRG	2 cut(s)	439, 2210
Bsp1286I	GDGCHC	4 cut(s)	929, 1533, 2629, 2766
Bsp13I	TCCGGA	1 cut(s)	947
Bsp1407I	TGTACA	1 cut(s)	2871
Bsp1720I	GCTNAGC	1 cut(s)	2015
Bsp19I	CCATGG	2 cut(s)	967, 1244
BspACI	CCGC	5 cut(s)	29, 318, 817, 1021, 1736
BspANI	GGCC	5 cut(s)	438, 752, 903, 1521, 1677
BspDI	ATCGAT	1 cut(s)	2344
BspEI	TCCGGA	1 cut(s)	947
BspHI	TCATGA	1 cut(s)	2326
BspLI	GGNNCC	4 cut(s)	152, 773, 1014, 1676
BspMAI	CTGCAG	1 cut(s)	2223
BspOI	GCTAGC	1 cut(s)	1199
BspPI	GGATC	4 cut(s)	862, 1007, 1020, 2140
BspQI	GCTCTTC	1 cut(s)	561
BsrDI	GCAATG	2 cut(s)	1974, 2302
BsrFI	RCCGGY	3 cut(s)	371, 583, 1598
BsrGI	TGTACA	1 cut(s)	2871
BsrI	ACTGG	3 cut(s)	510, 1896, 2578
BssAI	RCCGGY	3 cut(s)	371, 583, 1598
BssECI	CCNNGG	6 cut(s)	20, 439, 967, 1244, 2536, 2901
BssNAI	GTATAC	2 cut(s)	167, 533
BssSI	CACGAG	2 cut(s)	307, 366
BssT1I	CCWWGG	3 cut(s)	967, 1244, 2536
Bst1107I	GTATAC	2 cut(s)	167, 533
Bst2BI	CACGAG	2 cut(s)	307, 366
Bst2UI	CCWGG	2 cut(s)	1824, 2903
Bst4CI	ACNGT	4 cut(s)	1480, 1535, 1559, 2821
Bst6I	CTCTTC	2 cut(s)	561, 1247
BstAUI	TGTACA	1 cut(s)	2871
BstBAI	YACGTR	2 cut(s)	416, 1660
BstC8I	GCNNGC	5 cut(s)	7, 585, 634, 1197, 2111
BstDSI	CCRYGG	3 cut(s)	20, 967, 1244
BstENI	CCTNNNNNAGG	1 cut(s)	2739
BstF5I	GGATG	4 cut(s)	527, 787, 1374, 2158
BstH2I	RGCGCY	1 cut(s)	1503
BstHHI	GCGC	1 cut(s)	1502
BstMAI	GTCTC	4 cut(s)	593, 1092, 1133, 1335
BstMWI	GCNNNNNNNGC	6 cut(s)	35, 326, 584, 823, 924, 2494
BstNI	CCWGG	2 cut(s)	1824, 2903
BstNSI	RCATGY	3 cut(s)	703, 1585, 2584
BstSCI	CCNGG	4 cut(s)	438, 439, 1822, 2901
BstSFI	CTRYAG	1 cut(s)	2219
BstSNI	TACGTA	2 cut(s)	416, 1660
BstV1I	GCAGC	2 cut(s)	599, 2286
BstV2I	GAAGAC	4 cut(s)	45, 182, 483, 1461
BstX2I	RGATCY	5 cut(s)	396, 854, 1012, 1201, 1961
BstYI	RGATCY	5 cut(s)	396, 854, 1012, 1201, 1961
BstZ17I	GTATAC	2 cut(s)	167, 533
Bsu15I	ATCGAT	1 cut(s)	2344
BsuI	GTATCC	1 cut(s)	965
BsuRI	GGCC	5 cut(s)	438, 752, 903, 1521, 1677
BsuTUI	ATCGAT	1 cut(s)	2344
BtgI	CCRYGG	3 cut(s)	20, 967, 1244
BtrI	CACGTC	1 cut(s)	614
BtsCI	GGATG	4 cut(s)	527, 787, 1374, 2158
BtsIMutI	CAGTG	2 cut(s)	1476, 1531
Cac8I	GCNNGC	5 cut(s)	7, 585, 634, 1197, 2111
CciI	TCATGA	1 cut(s)	2326
CfoI	GCGC	1 cut(s)	1502
Cfr10I	RCCGGY	3 cut(s)	371, 583, 1598
Cfr13I	GGNCC	5 cut(s)	437, 751, 772, 902, 1675
Cfr9I	CCCGGG	1 cut(s)	439
ClaI	ATCGAT	1 cut(s)	2344
CseI	GACGC	3 cut(s)	1109, 1352, 1503
Csp6I	GTAC	7 cut(s)	315, 413, 846, 1302, 1444, 2632, 2872
CspAI	ACCGGT	1 cut(s)	1598
CviQI	GTAC	7 cut(s)	315, 413, 846, 1302, 1444, 2632, 2872
DraI	TTTAAA	1 cut(s)	1414
DriI	GACNNNNNGTC	1 cut(s)	2191
Eam1104I	CTCTTC	2 cut(s)	561, 1247
Eam1105I	GACNNNNNGTC	1 cut(s)	2191
EarI	CTCTTC	2 cut(s)	561, 1247
EciI	GGCGGA	1 cut(s)	44
Eco105I	TACGTA	2 cut(s)	416, 1660
Eco130I	CCWWGG	3 cut(s)	967, 1244, 2536
Eco24I	GRGCYC	1 cut(s)	2766
Eco32I	GATATC	3 cut(s)	1336, 2227, 2311
Eco47I	GGWCC	1 cut(s)	772
Eco47III	AGCGCT	1 cut(s)	1501
Eco57I	CTGAAG	3 cut(s)	453, 797, 1094
Eco88I	CYCGRG	2 cut(s)	439, 2210
EcoNI	CCTNNNNNAGG	1 cut(s)	2739
EcoO109I	RGGNCCY	1 cut(s)	772
EcoRI	GAATTC	1 cut(s)	1745
EcoRII	CCWGG	2 cut(s)	1822, 2901
EcoRV	GATATC	3 cut(s)	1336, 2227, 2311
EcoT14I	CCWWGG	3 cut(s)	967, 1244, 2536
EcoT38I	GRGCYC	1 cut(s)	2766
ErhI	CCWWGG	3 cut(s)	967, 1244, 2536
Esp3I	CGTCTC	1 cut(s)	1335
FalI	AAGNNNNNCTT	8 cut(s)	77, 109, 540, 572, 543, 575, 700, 732
FaqI	GGGAC	1 cut(s)	785
FauI	CCCGC	1 cut(s)	810
FblI	GTMKAC	4 cut(s)	166, 532, 704, 2889
Fnu4HI	GCNGC	2 cut(s)	588, 2300
FokI	GGATG	4 cut(s)	534, 794, 1381, 2145
FriOI	GRGCYC	1 cut(s)	2766
Fsp4HI	GCNGC	2 cut(s)	588, 2300
FspBI	CTAG	6 cut(s)	335, 680, 1196, 1461, 2124, 2408
GlaI	GCGC	1 cut(s)	1501
GluI	GCNGC	2 cut(s)	588, 2300
GsaI	CCCAGC	1 cut(s)	2092
GsuI	CTGGAG	3 cut(s)	288, 1607, 2541
HaeII	RGCGCY	1 cut(s)	1503
HaeIII	GGCC	5 cut(s)	438, 752, 903, 1521, 1677
HapII	CCGG	7 cut(s)	372, 440, 584, 948, 1599, 1773, 2657
HgaI	GACGC	3 cut(s)	1109, 1352, 1503
HhaI	GCGC	1 cut(s)	1502
Hin6I	GCGC	1 cut(s)	1500
HinP1I	GCGC	1 cut(s)	1500
HindIII	AAGCTT	1 cut(s)	2107
HinfI	GANTC	9 cut(s)	218, 263, 539, 653, 1175, 1787, 2273, 2398, 2786
HpaII	CCGG	7 cut(s)	372, 440, 584, 948, 1599, 1773, 2657
HphI	GGTGA	4 cut(s)	2212, 2307, 2822, 2917
Hpy166II	GTNNAC	6 cut(s)	167, 533, 705, 1325, 1741, 2890
Hpy8I	GTNNAC	6 cut(s)	167, 533, 705, 1325, 1741, 2890
Hpy99I	CGWCG	1 cut(s)	49
HpyAV	CCTTC	7 cut(s)	203, 428, 772, 1079, 2029, 2160, 2429
HpyCH4III	ACNGT	4 cut(s)	1480, 1535, 1559, 2821
HpyCH4IV	ACGT	5 cut(s)	415, 613, 1111, 1659, 1753
HpyF10VI	GCNNNNNNNGC	6 cut(s)	35, 326, 584, 823, 924, 2494
HpySE526I	ACGT	5 cut(s)	415, 613, 1111, 1659, 1753
HspAI	GCGC	1 cut(s)	1500
Kpn2I	TCCGGA	1 cut(s)	947
KroI	GCCGGC	1 cut(s)	583
KroNI	GCCGGC	1 cut(s)	585
LguI	GCTCTTC	1 cut(s)	561
LmnI	GCTCC	6 cut(s)	269, 987, 1915, 2461, 2493, 2569
Lsp1109I	GCAGC	2 cut(s)	599, 2286
MaeI	CTAG	6 cut(s)	335, 680, 1196, 1461, 2124, 2408
MaeII	ACGT	5 cut(s)	415, 613, 1111, 1659, 1753
MfeI	CAATTG	1 cut(s)	1215
MflI	RGATCY	5 cut(s)	396, 854, 1012, 1201, 1961
MhlI	GDGCHC	4 cut(s)	929, 1533, 2629, 2766
MlyI	GAGTC	3 cut(s)	533, 1169, 2407
MmeI	TCCRAC	3 cut(s)	1663, 1821, 2503
MroI	TCCGGA	1 cut(s)	947
MroNI	GCCGGC	1 cut(s)	583
MroXI	GAANNNNTTC	2 cut(s)	222, 555
MslI	CAYNNNNRTG	3 cut(s)	129, 143, 1287
MspA1I	CMGCKG	1 cut(s)	809
MspI	CCGG	7 cut(s)	372, 440, 584, 948, 1599, 1773, 2657
MspR9I	CCNGG	4 cut(s)	440, 441, 1824, 2903
MunI	CAATTG	1 cut(s)	1215
MvaI	CCWGG	2 cut(s)	1824, 2903
MwoI	GCNNNNNNNGC	6 cut(s)	35, 326, 584, 823, 924, 2494
NaeI	GCCGGC	1 cut(s)	585
NciI	CCSGG	2 cut(s)	440, 441
NcoI	CCATGG	2 cut(s)	967, 1244
NgoMIV	GCCGGC	1 cut(s)	583
NheI	GCTAGC	1 cut(s)	1195
NlaIV	GGNNCC	4 cut(s)	152, 773, 1014, 1676
NmeAIII	GCCGAG	2 cut(s)	1703, 2745
NmuCI	GTSAC	4 cut(s)	354, 1474, 1535, 2815
NspI	RCATGY	3 cut(s)	703, 1585, 2584
PaeR7I	CTCGAG	1 cut(s)	2210
PagI	TCATGA	1 cut(s)	2326
PciI	ACATGT	2 cut(s)	699, 2580
PciSI	GCTCTTC	1 cut(s)	561
PcsI	WCGNNNNNNNCGW	1 cut(s)	1117
PdiI	GCCGGC	1 cut(s)	585
PdmI	GAANNNNTTC	2 cut(s)	222, 555
PfeI	GAWTC	6 cut(s)	218, 263, 653, 1787, 2273, 2786
PflFI	GACNNNGTC	1 cut(s)	2612
PinAI	ACCGGT	1 cut(s)	1598
PkrI	GCNGC	2 cut(s)	589, 2301
PleI	GAGTC	3 cut(s)	533, 1169, 2406
PpsI	GAGTC	3 cut(s)	533, 1169, 2406
Ppu21I	YACGTR	2 cut(s)	416, 1660
PpuMI	RGGWCCY	1 cut(s)	772
PscI	ACATGT	2 cut(s)	699, 2580
PshBI	ATTAAT	2 cut(s)	1919, 2348
Psp5II	RGGWCCY	1 cut(s)	772
Psp6I	CCWGG	2 cut(s)	1822, 2901
PspFI	CCCAGC	1 cut(s)	2088
PspGI	CCWGG	2 cut(s)	1822, 2901
PspN4I	GGNNCC	4 cut(s)	152, 773, 1014, 1676
PspPI	GGNCC	5 cut(s)	437, 751, 772, 902, 1675
PspPPI	RGGWCCY	1 cut(s)	772
PspXI	VCTCGAGB	1 cut(s)	2210
PstI	CTGCAG	1 cut(s)	2223
PsuI	RGATCY	5 cut(s)	396, 854, 1012, 1201, 1961
PsyI	GACNNNGTC	1 cut(s)	2612
PvuII	CAGCTG	1 cut(s)	809
RsaI	GTAC	7 cut(s)	316, 414, 847, 1303, 1445, 2633, 2873
RsaNI	GTAC	7 cut(s)	315, 413, 846, 1302, 1444, 2632, 2872
RseI	CAYNNNNRTG	3 cut(s)	129, 143, 1287
SapI	GCTCTTC	1 cut(s)	561
SatI	GCNGC	2 cut(s)	588, 2300
Sau96I	GGNCC	5 cut(s)	437, 751, 772, 902, 1675
ScaI	AGTACT	1 cut(s)	2633
SchI	GAGTC	3 cut(s)	533, 1169, 2407
ScrFI	CCNGG	4 cut(s)	440, 441, 1824, 2903
SduI	GDGCHC	4 cut(s)	929, 1533, 2629, 2766
SfcI	CTRYAG	1 cut(s)	2219
Sfr274I	CTCGAG	1 cut(s)	2210
SinI	GGWCC	1 cut(s)	772
SlaI	CTCGAG	1 cut(s)	2210
SmaI	CCCGGG	1 cut(s)	441
SmiMI	CAYNNNNRTG	3 cut(s)	129, 143, 1287
SmlI	CTYRAG	4 cut(s)	1180, 2210, 2402, 2781
SmoI	CTYRAG	4 cut(s)	1180, 2210, 2402, 2781
SnaBI	TACGTA	2 cut(s)	416, 1660
SpeI	ACTAGT	1 cut(s)	1460
SsiI	CCGC	5 cut(s)	29, 318, 817, 1021, 1736
SspI	AATATT	1 cut(s)	2529
SspMI	CTAG	6 cut(s)	335, 680, 1196, 1461, 2124, 2408
StyD4I	CCNGG	4 cut(s)	438, 439, 1822, 2901
StyI	CCWWGG	3 cut(s)	967, 1244, 2536
TaaI	ACNGT	4 cut(s)	1480, 1535, 1559, 2821
TaiI	ACGT	5 cut(s)	418, 616, 1114, 1662, 1756
TatI	WGTACW	4 cut(s)	845, 1443, 2631, 2871
TfiI	GAWTC	6 cut(s)	218, 263, 653, 1787, 2273, 2786
TscAI	CASTG	2 cut(s)	1483, 1538
TseFI	GTSAC	4 cut(s)	354, 1474, 1535, 2815
TseI	GCWGC	2 cut(s)	587, 2299
Tsp45I	GTSAC	4 cut(s)	354, 1474, 1535, 2815
TspGWI	ACGGA	2 cut(s)	64, 2069
TspMI	CCCGGG	1 cut(s)	439
TspRI	CASTG	2 cut(s)	1483, 1538
Tth111I	GACNNNGTC	1 cut(s)	2612
VpaK11BI	GGWCC	1 cut(s)	772
VspI	ATTAAT	2 cut(s)	1919, 2348
XagI	CCTNNNNNAGG	1 cut(s)	2739
XapI	RAATTY	5 cut(s)	622, 1745, 1807, 1829, 2515
XceI	RCATGY	3 cut(s)	703, 1585, 2584
XcmI	CCANNNNNNNNNTGG	2 cut(s)	18, 1820
XhoI	CTCGAG	1 cut(s)	2210
XmaI	CCCGGG	1 cut(s)	439
XmiI	GTMKAC	4 cut(s)	166, 532, 704, 2889
XmnI	GAANNNNTTC	2 cut(s)	222, 555
XspI	CTAG	6 cut(s)	335, 680, 1196, 1461, 2124, 2408
ZrmI	AGTACT	1 cut(s)	2633

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.