Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0005314.1

Orthogroup ID

OG0007152

Physical Location & Seq

Genomic Coordinates Forward (+)

47409 .. 56681

Gene Structure 9273 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0005314.1_g000009.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2937 bp

atggcggaccctcagaaccagaagccatggaaggtcgagtacgccaagtcttcacgatcgtcatgcaaaacctgcagaaaccccattgaaaaagagaacctccgcttcggcaaaatggtccaggccaaacaattcgacggcttcatgcccatgtggaaccatgctagttgcataatgaagaaggcgaagcagataaaatcaactgatgatgttgaaggccttgagctcctccggtgggaagatcagaagaaaattagagattatgtacaaagtggtggttctggtggaccctcggatacaaccactacaagcaaggccagtgctacagaaagtggtattgaagtttcgcaaacttctcgggctacttgcaggctctgcagccaaaagattttaaaaggggaggtccgtatatcaaccaagcctgaaggtcaaggagctaggggcttggcatggctccatgtgaagtgtttcatggaatcatcaccatctacccaagtggagaagctgtctggatgggagaccatcccagtttctgatcaggcagctgtgtctgccttagttaaggatggcaaagaagttaaagagatcctgccacagtcaacttctaaagctggcactaaacgaagaaaagatggggatggtgatcagaagtcaaaagtttcgaagtcggaaggtgacgtgtcaacaagcagggatgtgtctgtgagtaatgctactgatatggagagcaaaatggaggcgcaaactaaagagctgtgggctctgaaagatgatctcaaaaagcatgtgacaactgtagagctgcgtaaaatgcttgaagccaatgatcaaggttcaacaggatcagagcttgatttgcgtgagcgctgcgctgatggaatgatgtttggagcacttagtacctgcccactctgttccggtcatcttcactattctggagccatgtacaggtgccatgggttcctgactgcatggagcaagtgttcttactctactcaagaacctgaacgtcgtaaagggaagtggaaaatcccagaagatacagataatcaatttctgcagaagtggtttaaatcacagaaggttagcaaacctacacgaatactgccaccgccatcatctaacaatcctggaggtcaagctttcaatggccaatctcagtctggtgcaagcttggcggatttgaaagtttcttttcgtggattaccaaaagaatccatggaaaagtggaataaagatatagagggtgtagctgggtccgttcatgccaagataaaaaaagatactaattgcttggttgtgggtggaggactggatgataaagatgctgagatgaaaaaagcaaggaggatgaaaataccaattgttagggaggattatctggttgattgctttaaaagaaagaagaagcttccatttgatctttacaaagttgaagctgttggtgaagcctctagcatggtcactgtcaaagtgaaagggcgaagtgccgttcatgaatcttctggattgcaagatacaggtcacatacttgaggatggaaaaagcatatataatacaactttaagcatgtctgatttgtcaaccggtgttaatagttattacatcctccaaattatacaagatgataaaagttcagactgccatgtgttccgtaaatggggacgagtaggcaatgacaaaattggaggaaccaaactagaagagatgtcaaaatatgatgccatatctgattttaaacgtttgtttcttgagaagaccggcaattcatgggaagcatgggagaaaaagcaagattttcagaagcaacctggaaaattctttccattggatattgattatggtgttaacaaaggggtttcaaagaaaaatcagaacaacgaacccagcaaattgcctcctcagttagcagagttgatgaagatgctcttcaacgttgaaacatacagagctgccatgatggaatttgagataaatatgtcagagatgccacttggaaaactgagtaaaagcaatatccaaaaggggtttgaggcattaacggaaatacagaatctattaaagagtgatggtgcctcttccgtaaaagatagcttgattgtagatgcaagcaatcgatttttcacagtgatcccttccatacatccgcatattattagggatgaggatgactttaagtcaaagttgaaaatgctagaagctctccaggacattgaaattgcttccagattagtcggttttgatgctgatagtgatgactctttggatgagaagtataagaagctccggtgttgtatgaatccacttcctcacgatagtgaagattatcggttgattgaaaagtatcttcttactactcatgcccctacacatacggattggagtctggaacttgaagaagttttttcacttgaaagggaaggggaattcgataaatacactccttaccggaaaaatcttaaaaacagaatgctgctttggcatggttctcggtttacgaactttgtgggaatacttagccaaggactaagaatagctcctcctgaagctccagctactggttatatgtttggcaaggggatttactttgctgaccttgtcagtaagagtgctcagtattgctatacagataagaaaaatcctgtgggcctcatgcttttaagtgaagttgccctgggagagatccatgagctccagaaggccacatatatggataaacctcctaagggaaagcactctacgaagggactaggcaggaaaaaacctgaggagtcggactatgttaaatggagggatgatgtcactgtgccctgcggcaaaccagtggattcacatgtcagggcctctgggctgatgtataatgagtatattgtttatgatacagctcaagttaagatgcaatttctattgaaggtgaagtttcatcacaagagatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0003909 GO:0003910 GO:0003950 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006266 GO:0006271 GO:0006273 GO:0006281 GO:0006464 GO:0006471 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006979 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009719 GO:0009725 GO:0009737 GO:0009987 GO:0010033 GO:0016070 GO:0016740 GO:0016757 GO:0016763 GO:0016874 GO:0016886 GO:0019538 GO:0022616 GO:0033554 GO:0033993 GO:0034641 GO:0034645 GO:0036211 GO:0042221 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0046483 GO:0050896 GO:0051103 GO:0051716 GO:0071704 GO:0090304 GO:0097305 GO:0140097 GO:1901360 GO:1901564 GO:1901576 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko03410 ko04210 ko04212 ko04214 ko04217 map03410 map04210 map04212 map04214 map04217

Pfam Domains

Protein Families

BRCT PADR1 PARP PARP_reg WGR zf-PARP

Protein Analysis

978

Amino Acids

110.07

Weight (kDa)

8.87

Isoelectric Point (pI)

41.88

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007152)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G31320
fragaria_vesca	FvH4_2g21980 FvH4_2g21980 FvH4_2g21980
malus_domestica	MD05G1201000.v1.1 MD10G1187800.v1.1
prunus_persica	Prupe.8G227600_v2.0.a1 Prupe.8G227600_v2.0.a1
pyrus_communis	pycom05g18780 pycom10g16230
rosa_chinensis	RchiOBHm_Chr6g0288861
rosa_laevigata	RLG00000012360
rosa_multiflora	Rmu_sc0005314.1_g000009
rosa_roxburghii	Rroxscaffold_7G00179830
rosa_rugosa	Rorug06G0198600 Rorug06G0198600 Rorug06G0198600 Rorug06G0198700 Rorug06G0198800 Rorug06G0198900 Rorug06G0198900
rosa_samantha	Rh6AG310000 Rh6BG315900 Rh6CG323400
rosa_wichuraiana	Rw6G026810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	80, 911
AccB1I	GGYRCC	2 cut(s)	951, 2072
AccB7I	CCANNNNNTGG	1 cut(s)	2558
AciI	CCGC	6 cut(s)	5, 103, 1112, 1178, 2147, 2814
AclI	AACGTT	2 cut(s)	1741, 1935
AclWI	GGATC	4 cut(s)	580, 850, 2125, 2677
AcoI	YGGCCR	1 cut(s)	1150
AcsI	RAATTY	3 cut(s)	1817, 1964, 2426
AcuI	CTGAAG	2 cut(s)	444, 2565
AfaI	GTAC	4 cut(s)	41, 267, 901, 947
AfeI	AGCGCT	1 cut(s)	866
AfiI	CCNNNNNNNGG	5 cut(s)	235, 948, 1660, 2558, 2726
AflIII	ACRYGT	2 cut(s)	678, 2833
AgeI	ACCGGT	1 cut(s)	1586
AhdI	GACNNNNNGTC	1 cut(s)	2176
AjiI	CACGTC	1 cut(s)	679
AjnI	CCWGG	5 cut(s)	120, 1129, 1810, 2205, 2673
AjuI	GAANNNNNNNTTGG	2 cut(s)	2461, 2493
AleI	CACNNNNGTG	1 cut(s)	2316
AloI	GAACNNNNNNTCC	2 cut(s)	967, 999
Alw21I	GWGCWC	4 cut(s)	228, 895, 2614, 2694
Alw26I	GTCTC	1 cut(s)	512
AlwI	GGATC	4 cut(s)	580, 850, 2125, 2677
AlwNI	CAGNNNCTG	3 cut(s)	375, 533, 2558
Ama87I	CYCGRG	1 cut(s)	357
Aor51HI	AGCGCT	1 cut(s)	866
AoxI	GGCC	7 cut(s)	123, 217, 315, 1150, 2647, 2700, 2841
ApeKI	GCWGC	6 cut(s)	378, 542, 802, 867, 1952, 2473
ApoI	RAATTY	3 cut(s)	1817, 1964, 2426
AsiGI	ACCGGT	1 cut(s)	1586
Asp700I	GAANNNNTTC	1 cut(s)	467
AspLEI	GCGC	3 cut(s)	742, 867, 872
AspS9I	GGNCC	7 cut(s)	7, 118, 287, 403, 1257, 2647, 2841
AsuHPI	GGTGA	5 cut(s)	474, 653, 686, 1457, 2926
AsuII	TTCGAA	1 cut(s)	662
AvaI	CYCGRG	1 cut(s)	357
AvaII	GGWCC	5 cut(s)	7, 118, 287, 403, 1257
AxyI	CCTNAGG	2 cut(s)	2724, 2766
BaeGI	GKGCMC	1 cut(s)	2811
BalI	TGGCCA	1 cut(s)	1152
BanI	GGYRCC	2 cut(s)	951, 2072
BanII	GRGCYC	3 cut(s)	228, 763, 2694
BarI	GAAGNNNNNNTAC	2 cut(s)	23, 55
BbsI	GAAGAC	2 cut(s)	42, 1763
Bbv12I	GWGCWC	4 cut(s)	228, 895, 2614, 2694
BbvI	GCAGC	6 cut(s)	390, 554, 789, 854, 1939, 2460
BceAI	ACGGC	2 cut(s)	154, 1475
BcgI	CGANNNNNNTGC	6 cut(s)	45, 79, 338, 372, 2471, 2505
BciT130I	CCWGG	5 cut(s)	122, 1131, 1812, 2207, 2675
BciVI	GTATCC	1 cut(s)	289
BclI	TGATCA	3 cut(s)	535, 643, 826
BcoDI	GTCTC	1 cut(s)	512
BfaI	CTAG	6 cut(s)	165, 438, 1455, 1700, 2195, 2750
BfmI	CTRYAG	5 cut(s)	73, 324, 376, 795, 1058
BfoI	RGCGCY	1 cut(s)	868
BfuAI	ACCTGC	2 cut(s)	80, 911
BfuI	GTATCC	1 cut(s)	289
BisI	GCNGC	7 cut(s)	379, 543, 803, 868, 1953, 2474, 2815
BlsI	GCNGC	7 cut(s)	380, 544, 804, 869, 1954, 2475, 2816
Bme1390I	CCNGG	5 cut(s)	122, 1131, 1812, 2207, 2675
Bme18I	GGWCC	5 cut(s)	7, 118, 287, 403, 1257
BmeRI	GACNNNNNGTC	1 cut(s)	2176
BmeT110I	CYCGRG	1 cut(s)	357
BmgBI	CACGTC	1 cut(s)	679
BmgT120I	GGNCC	7 cut(s)	7, 118, 287, 403, 1257, 2647, 2841
BmrFI	CCNGG	5 cut(s)	122, 1131, 1812, 2207, 2675
BmrI	ACTGGG	1 cut(s)	521
BmsI	GCATC	7 cut(s)	1315, 1711, 1914, 1977, 2095, 2233, 2886
BmuI	ACTGGG	1 cut(s)	521
BpiI	GAAGAC	2 cut(s)	42, 1763
BpmI	CTGGAG	5 cut(s)	957, 1152, 2189, 2535, 2678
Bpu14I	TTCGAA	1 cut(s)	662
BpuEI	CTTGAG	5 cut(s)	242, 981, 1553, 1772, 2871
Bsa29I	ATCGAT	1 cut(s)	2116
BsaBI	GATNNNNATC	1 cut(s)	642
BsaI	GGTCTC	1 cut(s)	512
BsaJI	CCNNGG	7 cut(s)	26, 291, 955, 1218, 2521, 2673, 2674
BsaWI	WCCGGW	5 cut(s)	231, 917, 1586, 2286, 2448
BsaXI	ACNNNNNCTCC	4 cut(s)	491, 521, 967, 997
Bsc4I	CCNNNNNNNGG	5 cut(s)	235, 948, 1660, 2558, 2726
Bse118I	RCCGGY	2 cut(s)	1586, 1760
Bse1I	ACTGG	5 cut(s)	318, 527, 1317, 2563, 2822
Bse21I	CCTNAGG	2 cut(s)	2724, 2766
Bse3DI	GCAATG	1 cut(s)	1681
Bse8I	GATNNNNATC	1 cut(s)	642
BseBI	CCWGG	5 cut(s)	122, 1131, 1812, 2207, 2675
BseCI	ATCGAT	1 cut(s)	2116
BseDI	CCNNGG	7 cut(s)	26, 291, 955, 1218, 2521, 2673, 2674
BseJI	GATNNNNATC	1 cut(s)	642
BseLI	CCNNNNNNNGG	5 cut(s)	235, 948, 1660, 2558, 2726
BseMI	GCAATG	1 cut(s)	1681
BseMII	CTCAG	7 cut(s)	26, 1172, 1320, 1916, 1994, 2627, 2757
BseNI	ACTGG	5 cut(s)	318, 527, 1317, 2563, 2822
BseRI	GAGGAG	4 cut(s)	218, 1890, 2529, 2783
BseSI	GKGCMC	1 cut(s)	2811
BseXI	GCAGC	6 cut(s)	390, 554, 789, 854, 1939, 2460
BseYI	CCCAGC	2 cut(s)	1253, 1886
Bsh1285I	CGRYCG	1 cut(s)	59
BshFI	GGCC	7 cut(s)	125, 219, 317, 1152, 2649, 2702, 2843
BshNI	GGYRCC	2 cut(s)	951, 2072
BshTI	ACCGGT	1 cut(s)	1586
BshVI	ATCGAT	1 cut(s)	2116
BsiEI	CGRYCG	1 cut(s)	59
BsiHKAI	GWGCWC	4 cut(s)	228, 895, 2614, 2694
BsiHKCI	CYCGRG	1 cut(s)	357
BsiSI	CCGG	6 cut(s)	232, 918, 1587, 1761, 2287, 2449
BslFI	GGGAC	2 cut(s)	1677, 2760
BslI	CCNNNNNNNGG	5 cut(s)	235, 948, 1660, 2558, 2726
BsmAI	GTCTC	1 cut(s)	512
BsmFI	GGGAC	2 cut(s)	1677, 2760
BsmI	GAATGC	1 cut(s)	2475
BsnI	GGCC	7 cut(s)	125, 219, 317, 1152, 2649, 2702, 2843
Bso31I	GGTCTC	1 cut(s)	512
BsoBI	CYCGRG	1 cut(s)	357
Bsp119I	TTCGAA	1 cut(s)	662
Bsp1286I	GDGCHC	6 cut(s)	228, 763, 895, 2614, 2694, 2811
Bsp1407I	TGTACA	2 cut(s)	265, 945
Bsp19I	CCATGG	3 cut(s)	26, 955, 1218
BspACI	CCGC	6 cut(s)	5, 103, 1112, 1178, 2147, 2814
BspANI	GGCC	7 cut(s)	125, 219, 317, 1152, 2649, 2702, 2843
BspCNI	CTCAG	7 cut(s)	25, 1171, 1321, 1915, 1995, 2626, 2758
BspDI	ATCGAT	1 cut(s)	2116
BspHI	TCATGA	1 cut(s)	1495
BspMAI	CTGCAG	3 cut(s)	77, 380, 1062
BspMI	ACCTGC	2 cut(s)	80, 911
BspPI	GGATC	4 cut(s)	580, 850, 2125, 2677
BspQI	GCTCTTC	1 cut(s)	1934
BspT104I	TTCGAA	1 cut(s)	662
BspT107I	GGYRCC	2 cut(s)	951, 2072
BspTNI	GGTCTC	1 cut(s)	512
BsrDI	GCAATG	1 cut(s)	1681
BsrFI	RCCGGY	2 cut(s)	1586, 1760
BsrGI	TGTACA	2 cut(s)	265, 945
BsrI	ACTGG	5 cut(s)	318, 527, 1317, 2563, 2822
BssAI	RCCGGY	2 cut(s)	1586, 1760
BssECI	CCNNGG	7 cut(s)	26, 291, 955, 1218, 2521, 2673, 2674
BssT1I	CCWWGG	4 cut(s)	26, 955, 1218, 2521
Bst2UI	CCWGG	5 cut(s)	122, 1131, 1812, 2207, 2675
Bst4CI	ACNGT	5 cut(s)	597, 796, 1468, 2128, 2806
Bst6I	CTCTTC	3 cut(s)	1698, 1934, 2083
BstAPI	GCANNNNNTGC	2 cut(s)	72, 375
BstAUI	TGTACA	2 cut(s)	265, 945
BstBI	TTCGAA	1 cut(s)	662
BstC8I	GCNNGC	4 cut(s)	371, 613, 1171, 2110
BstDSI	CCRYGG	3 cut(s)	26, 955, 1218
BstH2I	RGCGCY	1 cut(s)	868
BstHHI	GCGC	3 cut(s)	742, 867, 872
BstMAI	GTCTC	1 cut(s)	512
BstMCI	CGRYCG	1 cut(s)	59
BstMWI	GCNNNNNNNGC	7 cut(s)	72, 375, 551, 811, 856, 1175, 2479
BstNI	CCWGG	5 cut(s)	122, 1131, 1812, 2207, 2675
BstNSI	RCATGY	3 cut(s)	788, 1573, 2837
BstSCI	CCNGG	5 cut(s)	120, 1129, 1810, 2205, 2673
BstSFI	CTRYAG	5 cut(s)	73, 324, 376, 795, 1058
BstSLI	GKGCMC	1 cut(s)	2811
BstV1I	GCAGC	6 cut(s)	390, 554, 789, 854, 1939, 2460
BstV2I	GAAGAC	2 cut(s)	42, 1763
BstX2I	RGATCY	2 cut(s)	585, 2682
BstXI	CCANNNNNNTGG	1 cut(s)	2710
BstYI	RGATCY	2 cut(s)	585, 2682
Bsu15I	ATCGAT	1 cut(s)	2116
Bsu36I	CCTNAGG	2 cut(s)	2724, 2766
BsuI	GTATCC	1 cut(s)	289
BsuRI	GGCC	7 cut(s)	125, 219, 317, 1152, 2649, 2702, 2843
BsuTUI	ATCGAT	1 cut(s)	2116
BtgI	CCRYGG	3 cut(s)	26, 955, 1218
BtrI	CACGTC	1 cut(s)	679
BtsIMutI	CAGTG	5 cut(s)	325, 1464, 2133, 2802, 2829
BveI	ACCTGC	2 cut(s)	80, 911
Cac8I	GCNNGC	4 cut(s)	371, 613, 1171, 2110
CaiI	CAGNNNCTG	3 cut(s)	375, 533, 2558
CciI	TCATGA	1 cut(s)	1495
CfoI	GCGC	3 cut(s)	742, 867, 872
Cfr10I	RCCGGY	2 cut(s)	1586, 1760
Cfr13I	GGNCC	7 cut(s)	7, 118, 287, 403, 1257, 2647, 2841
ClaI	ATCGAT	1 cut(s)	2116
Csp6I	GTAC	4 cut(s)	40, 266, 900, 946
CspAI	ACCGGT	1 cut(s)	1586
CviQI	GTAC	4 cut(s)	40, 266, 900, 946
DraI	TTTAAA	4 cut(s)	393, 1072, 1396, 1738
DriI	GACNNNNNGTC	1 cut(s)	2176
EaeI	YGGCCR	1 cut(s)	1150
Eam1104I	CTCTTC	3 cut(s)	1698, 1934, 2083
Eam1105I	GACNNNNNGTC	1 cut(s)	2176
EarI	CTCTTC	3 cut(s)	1698, 1934, 2083
EciI	GGCGGA	2 cut(s)	20, 1193
Ecl136II	GAGCTC	2 cut(s)	226, 2692
Eco130I	CCWWGG	4 cut(s)	26, 955, 1218, 2521
Eco147I	AGGCCT	1 cut(s)	219
Eco24I	GRGCYC	3 cut(s)	228, 763, 2694
Eco31I	GGTCTC	1 cut(s)	512
Eco47I	GGWCC	5 cut(s)	7, 118, 287, 403, 1257
Eco47III	AGCGCT	1 cut(s)	866
Eco53kI	GAGCTC	2 cut(s)	226, 2692
Eco57I	CTGAAG	2 cut(s)	444, 2565
Eco81I	CCTNAGG	2 cut(s)	2724, 2766
Eco88I	CYCGRG	1 cut(s)	357
EcoICRI	GAGCTC	2 cut(s)	226, 2692
EcoO109I	RGGNCCY	1 cut(s)	2841
EcoRI	GAATTC	1 cut(s)	2426
EcoRII	CCWGG	5 cut(s)	120, 1129, 1810, 2205, 2673
EcoT14I	CCWWGG	4 cut(s)	26, 955, 1218, 2521
EcoT38I	GRGCYC	3 cut(s)	228, 763, 2694
ErhI	CCWWGG	4 cut(s)	26, 955, 1218, 2521
FalI	AAGNNNNNCTT	2 cut(s)	1913, 1945
FaqI	GGGAC	2 cut(s)	1677, 2760
FbaI	TGATCA	3 cut(s)	535, 643, 826
Fnu4HI	GCNGC	7 cut(s)	379, 543, 803, 868, 1953, 2474, 2815
FriOI	GRGCYC	3 cut(s)	228, 763, 2694
Fsp4HI	GCNGC	7 cut(s)	379, 543, 803, 868, 1953, 2474, 2815
FspBI	CTAG	6 cut(s)	165, 438, 1455, 1700, 2195, 2750
GlaI	GCGC	3 cut(s)	741, 866, 871
GluI	GCNGC	7 cut(s)	379, 543, 803, 868, 1953, 2474, 2815
GsaI	CCCAGC	2 cut(s)	1257, 1890
GsuI	CTGGAG	5 cut(s)	957, 1152, 2189, 2535, 2678
HaeII	RGCGCY	1 cut(s)	868
HaeIII	GGCC	7 cut(s)	125, 219, 317, 1152, 2649, 2702, 2843
HapII	CCGG	6 cut(s)	232, 918, 1587, 1761, 2287, 2449
HhaI	GCGC	3 cut(s)	742, 867, 872
Hin6I	GCGC	3 cut(s)	740, 865, 870
HinP1I	GCGC	3 cut(s)	740, 865, 870
HincII	GTYRAC	4 cut(s)	600, 684, 1584, 1849
HindII	GTYRAC	4 cut(s)	600, 684, 1584, 1849
HindIII	AAGCTT	3 cut(s)	1140, 1171, 1409
HinfI	GANTC	9 cut(s)	476, 1214, 1499, 2053, 2258, 2299, 2383, 2771, 2828
HpaI	GTTAAC	1 cut(s)	1849
HpaII	CCGG	6 cut(s)	232, 918, 1587, 1761, 2287, 2449
HphI	GGTGA	5 cut(s)	474, 653, 686, 1457, 2926
Hpy166II	GTNNAC	6 cut(s)	287, 600, 684, 1584, 1849, 2496
Hpy8I	GTNNAC	6 cut(s)	287, 600, 684, 1584, 1849, 2496
Hpy99I	CGWCG	2 cut(s)	140, 1014
HpyCH4III	ACNGT	5 cut(s)	597, 796, 1468, 2128, 2806
HpyCH4IV	ACGT	4 cut(s)	678, 1009, 1741, 1935
HpyF10VI	GCNNNNNNNGC	7 cut(s)	72, 375, 551, 811, 856, 1175, 2479
HpySE526I	ACGT	4 cut(s)	678, 1009, 1741, 1935
HspAI	GCGC	3 cut(s)	740, 865, 870
Ksp22I	TGATCA	3 cut(s)	535, 643, 826
KspAI	GTTAAC	1 cut(s)	1849
LguI	GCTCTTC	1 cut(s)	1934
Lsp1109I	GCAGC	6 cut(s)	390, 554, 789, 854, 1939, 2460
LweI	GCATC	7 cut(s)	1315, 1711, 1914, 1977, 2095, 2233, 2886
MaeI	CTAG	6 cut(s)	165, 438, 1455, 1700, 2195, 2750
MaeII	ACGT	4 cut(s)	678, 1009, 1741, 1935
MaeIII	GTNAC	5 cut(s)	674, 787, 1462, 1523, 2800
MfeI	CAATTG	1 cut(s)	1362
MflI	RGATCY	2 cut(s)	585, 2682
MhlI	GDGCHC	6 cut(s)	228, 763, 895, 2614, 2694, 2811
MlsI	TGGCCA	1 cut(s)	1152
MluNI	TGGCCA	1 cut(s)	1152
MlyI	GAGTC	3 cut(s)	2252, 2392, 2780
MmeI	TCCRAC	2 cut(s)	648, 2754
Mox20I	TGGCCA	1 cut(s)	1152
MroXI	GAANNNNTTC	1 cut(s)	467
MscI	TGGCCA	1 cut(s)	1152
MslI	CAYNNNNRTG	3 cut(s)	149, 2316, 2708
Msp20I	TGGCCA	1 cut(s)	1152
MspA1I	CMGCKG	1 cut(s)	545
MspI	CCGG	6 cut(s)	232, 918, 1587, 1761, 2287, 2449
MspR9I	CCNGG	5 cut(s)	122, 1131, 1812, 2207, 2675
MteI	GCGCNGCGC	1 cut(s)	868
MunI	CAATTG	1 cut(s)	1362
Mva1269I	GAATGC	1 cut(s)	2475
MvaI	CCWGG	5 cut(s)	122, 1131, 1812, 2207, 2675
MwoI	GCNNNNNNNGC	7 cut(s)	72, 375, 551, 811, 856, 1175, 2479
NcoI	CCATGG	3 cut(s)	26, 955, 1218
NmuCI	GTSAC	5 cut(s)	674, 787, 1462, 1523, 2800
NspI	RCATGY	3 cut(s)	788, 1573, 2837
NspV	TTCGAA	1 cut(s)	662
OliI	CACNNNNGTG	1 cut(s)	2316
PagI	TCATGA	1 cut(s)	1495
PasI	CCCWGGG	1 cut(s)	2674
PceI	AGGCCT	1 cut(s)	219
PciI	ACATGT	1 cut(s)	2833
PciSI	GCTCTTC	1 cut(s)	1934
PctI	GAATGC	1 cut(s)	2475
PdmI	GAANNNNTTC	1 cut(s)	467
PfeI	GAWTC	6 cut(s)	476, 1214, 1499, 2053, 2299, 2828
PflFI	GACNNNGTC	1 cut(s)	2597
PflMI	CCANNNNNTGG	1 cut(s)	2558
PfoI	TCCNGGA	2 cut(s)	1129, 2205
PinAI	ACCGGT	1 cut(s)	1586
PkrI	GCNGC	7 cut(s)	380, 544, 804, 869, 1954, 2475, 2816
Ple19I	CGATCG	1 cut(s)	59
PleI	GAGTC	3 cut(s)	2252, 2391, 2779
PpsI	GAGTC	3 cut(s)	2252, 2391, 2779
PscI	ACATGT	1 cut(s)	2833
Psp124BI	GAGCTC	2 cut(s)	228, 2694
Psp1406I	AACGTT	2 cut(s)	1741, 1935
Psp6I	CCWGG	5 cut(s)	120, 1129, 1810, 2205, 2673
PspFI	CCCAGC	2 cut(s)	1253, 1886
PspGI	CCWGG	5 cut(s)	120, 1129, 1810, 2205, 2673
PspPI	GGNCC	7 cut(s)	7, 118, 287, 403, 1257, 2647, 2841
PstI	CTGCAG	3 cut(s)	77, 380, 1062
PstNI	CAGNNNCTG	3 cut(s)	375, 533, 2558
PsuI	RGATCY	2 cut(s)	585, 2682
PsyI	GACNNNGTC	1 cut(s)	2597
PvuI	CGATCG	1 cut(s)	59
PvuII	CAGCTG	1 cut(s)	545
RsaI	GTAC	4 cut(s)	41, 267, 901, 947
RsaNI	GTAC	4 cut(s)	40, 266, 900, 946
RseI	CAYNNNNRTG	3 cut(s)	149, 2316, 2708
SacI	GAGCTC	2 cut(s)	228, 2694
SapI	GCTCTTC	1 cut(s)	1934
SatI	GCNGC	7 cut(s)	379, 543, 803, 868, 1953, 2474, 2815
Sau96I	GGNCC	7 cut(s)	7, 118, 287, 403, 1257, 2647, 2841
SchI	GAGTC	3 cut(s)	2252, 2392, 2780
ScrFI	CCNGG	5 cut(s)	122, 1131, 1812, 2207, 2675
SduI	GDGCHC	6 cut(s)	228, 763, 895, 2614, 2694, 2811
SfaNI	GCATC	7 cut(s)	1315, 1711, 1914, 1977, 2095, 2233, 2886
SfcI	CTRYAG	5 cut(s)	73, 324, 376, 795, 1058
SfuI	TTCGAA	1 cut(s)	662
SinI	GGWCC	5 cut(s)	7, 118, 287, 403, 1257
SmiMI	CAYNNNNRTG	3 cut(s)	149, 2316, 2708
SmlI	CTYRAG	5 cut(s)	221, 996, 1532, 1751, 2886
SmoI	CTYRAG	5 cut(s)	221, 996, 1532, 1751, 2886
SseBI	AGGCCT	1 cut(s)	219
SsiI	CCGC	6 cut(s)	5, 103, 1112, 1178, 2147, 2814
SspMI	CTAG	6 cut(s)	165, 438, 1455, 1700, 2195, 2750
SstI	GAGCTC	2 cut(s)	228, 2694
StuI	AGGCCT	1 cut(s)	219
StyD4I	CCNGG	5 cut(s)	120, 1129, 1810, 2205, 2673
StyI	CCWWGG	4 cut(s)	26, 955, 1218, 2521
TaaI	ACNGT	5 cut(s)	597, 796, 1468, 2128, 2806
TaiI	ACGT	4 cut(s)	681, 1012, 1744, 1938
TaqI	TCGA	5 cut(s)	36, 135, 662, 2116, 2430
TatI	WGTACW	2 cut(s)	265, 945
TauI	GCSGC	1 cut(s)	2817
TfiI	GAWTC	6 cut(s)	476, 1214, 1499, 2053, 2299, 2828
TscAI	CASTG	5 cut(s)	325, 1471, 2133, 2809, 2829
TseFI	GTSAC	5 cut(s)	674, 787, 1462, 1523, 2800
TseI	GCWGC	6 cut(s)	378, 542, 802, 867, 1952, 2473
Tsp45I	GTSAC	5 cut(s)	674, 787, 1462, 1523, 2800
TspGWI	ACGGA	6 cut(s)	395, 1249, 1643, 2057, 2071, 2390
TspRI	CASTG	5 cut(s)	325, 1471, 2133, 2809, 2829
Tth111I	GACNNNGTC	1 cut(s)	2597
Van91I	CCANNNNNTGG	1 cut(s)	2558
VpaK11BI	GGWCC	5 cut(s)	7, 118, 287, 403, 1257
XapI	RAATTY	3 cut(s)	1817, 1964, 2426
XceI	RCATGY	3 cut(s)	788, 1573, 2837
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1160
XmnI	GAANNNNTTC	1 cut(s)	467
XspI	CTAG	6 cut(s)	165, 438, 1455, 1700, 2195, 2750

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.