AT2G32520

Dienelactone hydrolase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
OG0007174
Physical Location & Seq
Reverse (-)
13805289 .. 13807710
2422 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G32520.2

Sequence Viewer

Length: 720 bp
ATGGCGGATTCAGCTTTCAGGAAAATTCAGATCCAAAGAGATGACACTACATTTGATGCCTATGTGGTCGGTAAAGATGATGCGCCTGGGATTGTGGTGATTCAAGAATGGTGGGGTGTTGACTTTGAGATCAAGAACCATGCTATTAAAATCTCACAACTTGAGCCTGGATTCAAAGCCCTTATACCTGACTTGTATCGAGGAAAGGTTGGTTTGGATACTGCAGAGGCACAGCATCTAATGGATGGCCTTGATTGGCCAGGTGCTATCAAAGATATCCGCGCTTCTGTTAATTGGCTAAAATCCAATGGCTCAAAAAAGGTTGGTGTCACTGGAATGTGCATGGGAGGTGCATTAGCTATAGCTAGCTCTGTATTGGTTCCTGAGGTGGATGCTGTTGTTGGATTCTATGGAACCCCTTCCTCAGAGCTCGCAGATCCAGCACAAGCTAAGGCACCTATTCAGGCTCATTTTGGAGAGCTCGACAATTTTGTCGGTTTTTCTGATGTCACGGCAGCAAAGAATCTCGAAGAGAAGCTGAAAGCGTCTGGAGTAGCACATGAAGTTCACATCTATCCAGGTAATGGACACGCGTTCTTGAACAGGAGTCCAGAAGGAGTGAGCAGAAGGAAAAGCATGGGACTTTCTGATGAAGATGAAGCCGCAGTGGAGCTTGCTTGGTCTCGCTTCACCTCCTGGATGAAACAGTACTTGGCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00361 ko00364 ko00623 ko01100 ko01110 ko01120 ko01130 map00361 map00364 map00623 map01100 map01110 map01120 map01130
Pfam Domains
Protein Families
DLH

Protein Analysis

239

Amino Acids

25.92

Weight (kDa)

5.26

Isoelectric Point (pI)

20.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DLH PF01738 96 - 316 2e-64 Dienelactone hydrolase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 491
AccB1I GGYRCC 1 cut(s) 454
AccB7I CCANNNNNTGG 1 cut(s) 584
AccII CGCG 2 cut(s) 282, 593
AciI CCGC 3 cut(s) 5, 280, 663
AclWI GGATC 2 cut(s) 25, 431
AcoI YGGCCR 1 cut(s) 257
AcsI RAATTY 1 cut(s) 24
AfaI GTAC 1 cut(s) 710
AfiI CCNNNNNNNGG 1 cut(s) 584
AflIII ACRYGT 1 cut(s) 591
AgsI TTSAA 3 cut(s) 104, 175, 601
AjnI CCWGG 5 cut(s) 85, 166, 259, 577, 695
AjuI GAANNNNNNNTTGG 1 cut(s) 695
AluBI AGCT 9 cut(s) 14, 359, 365, 369, 430, 449, 481, 538, 673
AluI AGCT 9 cut(s) 14, 359, 365, 369, 430, 449, 481, 538, 673
Alw21I GWGCWC 2 cut(s) 432, 483
Alw26I GTCTC 1 cut(s) 687
AlwI GGATC 2 cut(s) 25, 431
AoxI GGCC 2 cut(s) 247, 257
ApeKI GCWGC 1 cut(s) 515
ApoI RAATTY 1 cut(s) 24
ArsI GACNNNNNNTTYG 2 cut(s) 35, 67
Asp700I GAANNNNTTC 1 cut(s) 418
AspLEI GCGC 2 cut(s) 85, 284
AsuHPI GGTGA 2 cut(s) 109, 682
AsuNHI GCTAGC 1 cut(s) 365
AxyI CCTNAGG 1 cut(s) 384
BalI TGGCCA 1 cut(s) 259
BanI GGYRCC 1 cut(s) 454
BanII GRGCYC 2 cut(s) 432, 483
Bbv12I GWGCWC 2 cut(s) 432, 483
BbvI GCAGC 1 cut(s) 527
BccI CCATC 1 cut(s) 239
BceAI ACGGC 1 cut(s) 528
BciT130I CCWGG 5 cut(s) 87, 168, 261, 579, 697
BciVI GTATCC 1 cut(s) 211
BcoDI GTCTC 1 cut(s) 687
BfaI CTAG 1 cut(s) 366
BfmI CTRYAG 2 cut(s) 222, 360
BfuI GTATCC 1 cut(s) 211
BisI GCNGC 2 cut(s) 516, 663
BlsI GCNGC 2 cut(s) 517, 664
BmcAI AGTACT 1 cut(s) 710
Bme1390I CCNGG 5 cut(s) 87, 168, 261, 579, 697
BmiI GGNNCC 3 cut(s) 381, 415, 456
BmrFI CCNGG 5 cut(s) 87, 168, 261, 579, 697
BmsI GCATC 4 cut(s) 46, 70, 244, 382
BmtI GCTAGC 1 cut(s) 369
BpmI CTGGAG 1 cut(s) 570
Bpu10I CCTNAGC 1 cut(s) 450
BpuEI CTTGAG 1 cut(s) 182
BsaI GGTCTC 1 cut(s) 687
BsaJI CCNNGG 1 cut(s) 86
Bsc4I CCNNNNNNNGG 1 cut(s) 584
Bse1I ACTGG 1 cut(s) 337
Bse21I CCTNAGG 1 cut(s) 384
BseBI CCWGG 5 cut(s) 87, 168, 261, 579, 697
BseDI CCNNGG 1 cut(s) 86
BseGI GGATG 3 cut(s) 250, 397, 705
BseLI CCNNNNNNNGG 1 cut(s) 584
BseMII CTCAG 2 cut(s) 375, 438
BseNI ACTGG 1 cut(s) 337
BseXI GCAGC 1 cut(s) 527
Bsh1236I CGCG 2 cut(s) 282, 593
BshFI GGCC 2 cut(s) 249, 259
BshNI GGYRCC 1 cut(s) 454
BsiHKAI GWGCWC 2 cut(s) 432, 483
BslFI GGGAC 1 cut(s) 654
BslI CCNNNNNNNGG 1 cut(s) 584
BsmAI GTCTC 1 cut(s) 687
BsmFI GGGAC 1 cut(s) 654
BsnI GGCC 2 cut(s) 249, 259
Bso31I GGTCTC 1 cut(s) 687
Bsp1286I GDGCHC 2 cut(s) 432, 483
Bsp143I GATC 3 cut(s) 30, 129, 436
BspACI CCGC 3 cut(s) 5, 280, 663
BspANI GGCC 2 cut(s) 249, 259
BspCNI CTCAG 2 cut(s) 376, 437
BspFNI CGCG 2 cut(s) 282, 593
BspLI GGNNCC 3 cut(s) 381, 415, 456
BspMAI CTGCAG 1 cut(s) 226
BspOI GCTAGC 1 cut(s) 369
BspPI GGATC 2 cut(s) 25, 431
BspT107I GGYRCC 1 cut(s) 454
BspTNI GGTCTC 1 cut(s) 687
BsrI ACTGG 1 cut(s) 337
BssECI CCNNGG 1 cut(s) 86
BssMI GATC 3 cut(s) 30, 129, 436
Bst2UI CCWGG 5 cut(s) 87, 168, 261, 579, 697
Bst4CI ACNGT 1 cut(s) 708
Bst6I CTCTTC 1 cut(s) 525
BstC8I GCNNGC 3 cut(s) 367, 432, 675
BstDEI CTNAG 3 cut(s) 384, 424, 450
BstF5I GGATG 3 cut(s) 250, 397, 705
BstFNI CGCG 2 cut(s) 282, 593
BstHHI GCGC 2 cut(s) 85, 284
BstKTI GATC 3 cut(s) 33, 132, 439
BstMAI GTCTC 1 cut(s) 687
BstMBI GATC 3 cut(s) 30, 129, 436
BstMWI GCNNNNNNNGC 2 cut(s) 11, 440
BstNI CCWGG 5 cut(s) 87, 168, 261, 579, 697
BstSCI CCNGG 5 cut(s) 85, 166, 259, 577, 695
BstSFI CTRYAG 2 cut(s) 222, 360
BstUI CGCG 2 cut(s) 282, 593
BstV1I GCAGC 1 cut(s) 527
BstX2I RGATCY 2 cut(s) 30, 436
BstYI RGATCY 2 cut(s) 30, 436
Bsu36I CCTNAGG 1 cut(s) 384
BsuI GTATCC 1 cut(s) 211
BsuRI GGCC 2 cut(s) 249, 259
BtsCI GGATG 3 cut(s) 250, 397, 705
BtsI GCAGTG 1 cut(s) 672
BtsIMutI CAGTG 2 cut(s) 330, 672
Cac8I GCNNGC 3 cut(s) 367, 432, 675
CfoI GCGC 2 cut(s) 85, 284
CseI GACGC 1 cut(s) 534
Csp6I GTAC 1 cut(s) 709
CspCI CAANNNNNGTGG 2 cut(s) 92, 127
CviAII CATG 4 cut(s) 140, 343, 560, 637
CviQI GTAC 1 cut(s) 709
DdeI CTNAG 3 cut(s) 384, 424, 450
DpnI GATC 3 cut(s) 32, 131, 438
DpnII GATC 3 cut(s) 30, 129, 436
DrdI GACNNNNNNGTC 1 cut(s) 491
DseDI GACNNNNNNGTC 1 cut(s) 491
EaeI YGGCCR 1 cut(s) 257
Eam1104I CTCTTC 1 cut(s) 525
EarI CTCTTC 1 cut(s) 525
EciI GGCGGA 1 cut(s) 20
Ecl136II GAGCTC 2 cut(s) 430, 481
Eco24I GRGCYC 2 cut(s) 432, 483
Eco31I GGTCTC 1 cut(s) 687
Eco32I GATATC 1 cut(s) 277
Eco53kI GAGCTC 2 cut(s) 430, 481
Eco81I CCTNAGG 1 cut(s) 384
EcoICRI GAGCTC 2 cut(s) 430, 481
EcoRII CCWGG 5 cut(s) 85, 166, 259, 577, 695
EcoRV GATATC 1 cut(s) 277
EcoT38I GRGCYC 2 cut(s) 432, 483
FaeI CATG 4 cut(s) 143, 346, 563, 640
FaiI YATR 8 cut(s) 63, 141, 185, 344, 362, 411, 561, 638
FaqI GGGAC 1 cut(s) 654
FatI CATG 4 cut(s) 139, 342, 559, 636
Fnu4HI GCNGC 2 cut(s) 516, 663
FokI GGATG 3 cut(s) 257, 404, 712
FriOI GRGCYC 2 cut(s) 432, 483
Fsp4HI GCNGC 2 cut(s) 516, 663
FspBI CTAG 1 cut(s) 366
GlaI GCGC 2 cut(s) 84, 283
GluI GCNGC 2 cut(s) 516, 663
GsuI CTGGAG 1 cut(s) 570
HaeIII GGCC 2 cut(s) 249, 259
HgaI GACGC 1 cut(s) 534
HhaI GCGC 2 cut(s) 85, 284
Hin1II CATG 4 cut(s) 143, 346, 563, 640
Hin6I GCGC 2 cut(s) 83, 282
HinP1I GCGC 2 cut(s) 83, 282
HincII GTYRAC 1 cut(s) 121
HindII GTYRAC 1 cut(s) 121
HinfI GANTC 6 cut(s) 8, 100, 171, 405, 523, 607
HphI GGTGA 2 cut(s) 109, 682
Hpy166II GTNNAC 2 cut(s) 121, 568
Hpy188I TCNGA 4 cut(s) 30, 427, 505, 649
Hpy188III TCNNGA 8 cut(s) 19, 104, 133, 383, 527, 549, 598, 611
Hpy8I GTNNAC 2 cut(s) 121, 568
HpyAV CCTTC 3 cut(s) 429, 608, 621
HpyCH4III ACNGT 1 cut(s) 708
HpyCH4V TGCA 3 cut(s) 224, 342, 353
HpyF10VI GCNNNNNNNGC 2 cut(s) 11, 440
HpyF3I CTNAG 3 cut(s) 384, 424, 450
Hsp92II CATG 4 cut(s) 143, 346, 563, 640
HspAI GCGC 2 cut(s) 83, 282
Kzo9I GATC 3 cut(s) 30, 129, 436
LmnI GCTCC 1 cut(s) 670
Lsp1109I GCAGC 1 cut(s) 527
LweI GCATC 4 cut(s) 46, 70, 244, 382
MaeI CTAG 1 cut(s) 366
MaeIII GTNAC 2 cut(s) 328, 508
MalI GATC 3 cut(s) 32, 131, 438
MboI GATC 3 cut(s) 30, 129, 436
MboII GAAGA 2 cut(s) 542, 665
MflI RGATCY 2 cut(s) 30, 436
MhlI GDGCHC 2 cut(s) 432, 483
MlsI TGGCCA 1 cut(s) 259
MluCI AATT 3 cut(s) 24, 292, 487
MluI ACGCGT 1 cut(s) 591
MluNI TGGCCA 1 cut(s) 259
MlyI GAGTC 1 cut(s) 616
MmeI TCCRAC 1 cut(s) 382
MnlI CCTC 6 cut(s) 194, 220, 341, 379, 433, 703
Mox20I TGGCCA 1 cut(s) 259
MroXI GAANNNNTTC 1 cut(s) 418
MscI TGGCCA 1 cut(s) 259
MseI TTAA 3 cut(s) 147, 291, 718
MslI CAYNNNNRTG 1 cut(s) 335
Msp20I TGGCCA 1 cut(s) 259
MspR9I CCNGG 5 cut(s) 87, 168, 261, 579, 697
MvaI CCWGG 5 cut(s) 87, 168, 261, 579, 697
MvnI CGCG 2 cut(s) 282, 593
MwoI GCNNNNNNNGC 2 cut(s) 11, 440
NdeII GATC 3 cut(s) 30, 129, 436
NheI GCTAGC 1 cut(s) 365
NlaIII CATG 4 cut(s) 143, 346, 563, 640
NlaIV GGNNCC 3 cut(s) 381, 415, 456
NmuCI GTSAC 2 cut(s) 328, 508
PdmI GAANNNNTTC 1 cut(s) 418
PfeI GAWTC 5 cut(s) 8, 100, 171, 405, 523
PflMI CCANNNNNTGG 1 cut(s) 584
PfoI TCCNGGA 1 cut(s) 695
PkrI GCNGC 2 cut(s) 517, 664
PleI GAGTC 1 cut(s) 615
PpsI GAGTC 1 cut(s) 615
Psp124BI GAGCTC 2 cut(s) 432, 483
Psp6I CCWGG 5 cut(s) 85, 166, 259, 577, 695
PspGI CCWGG 5 cut(s) 85, 166, 259, 577, 695
PspN4I GGNNCC 3 cut(s) 381, 415, 456
PstI CTGCAG 1 cut(s) 226
PsuI RGATCY 2 cut(s) 30, 436
RsaI GTAC 1 cut(s) 710
RsaNI GTAC 1 cut(s) 709
RseI CAYNNNNRTG 1 cut(s) 335
SacI GAGCTC 2 cut(s) 432, 483
SaqAI TTAA 3 cut(s) 147, 291, 718
SatI GCNGC 2 cut(s) 516, 663
Sau3AI GATC 3 cut(s) 30, 129, 436
ScaI AGTACT 1 cut(s) 710
SchI GAGTC 1 cut(s) 616
ScrFI CCNGG 5 cut(s) 87, 168, 261, 579, 697
SduI GDGCHC 2 cut(s) 432, 483
SfaNI GCATC 4 cut(s) 46, 70, 244, 382
SfcI CTRYAG 2 cut(s) 222, 360
SmiMI CAYNNNNRTG 1 cut(s) 335
SmlI CTYRAG 1 cut(s) 161
SmoI CTYRAG 1 cut(s) 161
Sse9I AATT 3 cut(s) 24, 292, 487
SsiI CCGC 3 cut(s) 5, 280, 663
SspMI CTAG 1 cut(s) 366
SstI GAGCTC 2 cut(s) 432, 483
StyD4I CCNGG 5 cut(s) 85, 166, 259, 577, 695
TaaI ACNGT 1 cut(s) 708
TaqI TCGA 3 cut(s) 199, 483, 528
TasI AATT 3 cut(s) 24, 292, 487
TatI WGTACW 1 cut(s) 708
TauI GCSGC 1 cut(s) 665
TfiI GAWTC 5 cut(s) 8, 100, 171, 405, 523
Tru1I TTAA 3 cut(s) 147, 291, 718
Tru9I TTAA 3 cut(s) 147, 291, 718
TscAI CASTG 2 cut(s) 337, 672
TseFI GTSAC 2 cut(s) 328, 508
TseI GCWGC 1 cut(s) 515
Tsp45I GTSAC 2 cut(s) 328, 508
TspDTI ATGAA 4 cut(s) 576, 666, 672, 716
TspRI CASTG 2 cut(s) 337, 672
Van91I CCANNNNNTGG 1 cut(s) 584
XapI RAATTY 1 cut(s) 24
XmnI GAANNNNTTC 1 cut(s) 418
XspI CTAG 1 cut(s) 366
ZrmI AGTACT 1 cut(s) 710
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.