Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0002724

Physical Location & Seq

Genomic Coordinates Forward (+)

60393882 .. 60401696

Gene Structure 7815 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0472600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2781 bp

ATGGAATCTTTATGTGCCAGTCAATGTTGCCTTTTTTTGTACGTTGATAAGCTGCACCATGAAGCTAGGAATGAAAATTCTTGCAAACTCAAACAGAAAACTCCAGTCAATTTTGCCAAAAAACTGCATAAGAAGGTTGCAATAGATATTTCTGATGCTGTGACTGGCCGTGCAAAGACACCAAATGTGAAATATTTATCTACACAGAAGAGAAAAGTAGATCAAACATCCAAATTTATTCCTAAGCAGAAAAAGCCAATGTTTACCACTCGCAGTATTCTCAAGAATCGTGTTCTTTGTGGGCAGAACACTACATTTTACAGAATGGAAGGTGATAGTCAAGAAAATACTTGTGGTTTTCAACATTCAAGAAGGCATGTCAAGTTTTCTGGCAAGGATGACATACTTGGTCCAAAAAAGAATGAAAAATCTTCATTTGAGCATAACTTTTTTTCTGATACATTAGCTAGTTCATCAGAGAAGGATCAGTCTGCTGACAGTGATAAAGAAGCAGCCCCAATTGAGGTTGACAGAAGAGAAAACAATGTTTCTGTCAGCACAGATAATGGAATTGAGGCTTGCAGTAAACCTGGAAGGAAAGAAAATCCTGAACTTCTTGATCACGTTGGTTTACCAAGTTTTCTTAGGCCGCATATAACTAGTCAAGAAAAAGCAAAGCATTTGGCAGAGAAACCTGTACCAGCAAGTAAAGTTGCTGCAACTCCAGATAATAATTTGCACATGTTCAGTCAAGGCTACCTGACCGCTGCACGTGAACCTGCATATGCTGGCATTCCTAGGCTGATATCTGCTCTAGAAGATTCCTGCATAAAAACTCAAGGAATTACGGTTTCCAGAGCTTTTGGTTCCAGCGGCAAGATGATTGATCATTTTGTGCATCCTATCCATGGAGTTTCTGCACTGAGTTCAAAGGAAAACACAGGAGCATTTTTCGAACCTTCTATACATAATTTCATTTCAAATGAGAATGTAAAAGGGAGGATTCAGTTTCTGTCACCATCTGAAAGAGACAGAATTAGTGATCATGGTCTGCACTACCAGTCCATACGTCCTCCTATGGACGTAGTAGGTGACTCATATCCATTTCCGCAGTGGAAACAAAGACCAGTTACCTTTACGGAAAGGCTTTTGGATGATAAGTTTTATGGTTTGCCTCTCAATTCACATGGTGAGCTAATACAGTTTAGTTCAAGGGGTGGTAGTGGATTTGACCAGCTGGGGAAGTTGAATACTGTAGCTGGATCCTCCAGTAGCTTACCTGCATACAACCAGCATTTTGTTGAGAGAGAAGTTCCAAGAGACAAGTTAAATTTGTTTCCAATGCAGAATTATGTTAGAGAGAATTGCAGTTCACATTTTCCAGATAGATTAGGTGTTACTTACTTTGGAAGTGCTCAAAGACCAGATGTGCACCAGCTTGATTTTGGGAGCAGAATCAGCCACTCTTTTCATCCGCTTCATTCAGACCTGAACGCATTCAGCATCTCTAGCACTAGATGCAGACAGTTTAACCAGGTACAGAATGACAACATAGGCATAGGCGGAATGATTCCTAAGGAAACTTCATGTCCCATGTCGCTGAACATGAATCAACCAACAATGCGGTTAATGGGAAAAGATGTTGCAATTGGTAACAGTAGCAGACAAATTCATGGGTTTGAGGATGGAAAGCTTTGGATGGATAAGGAAATTATAGCTGAGCATTGTCCTTCAAGTAATGCCTTGCTGAATTCTTCATTGAAGCAGAATTTCCATCAGAATTGCTATCCACCCACAACATCAGCAAAGTTGAAAGAAACTGTATCGCAGTCCTTAGGAATTTGCAGTGAACAGGCTCCACAATCAAATTTACGGATGAAAGCTCCAGAGTTCAGGTTTCCTCACCCTTACCAGAAGTGGCAAAGTGGCTCTGGGTTTGAGCATGGCAGCCATACCGCCTCCAGAAGTCCAAGTTCTAGTTTACTTCATTTCTCTCAGTCACCAAATTCACCTGCATTGTTCAATGGGGAACACAATTTTTGTGCACCGTTCATATCTAGAACTGAATCTCTACAATCTCAACTGTTTGGTTCTCAGCTACCTGTATTATCTACTCCGCAGATTACCTATGAGCATGGGATTTTAAGACCTGCTGAAACCAGTTGCAAGCAGCATCCACCTCATTTTAGAAAATCAGCATTTGACTTCCCTTTCCTAAATCCAGAATGTAGAGAAAATGTCCAATCATCATGGTTTCAGAACTCCTCTAAGGCTGGCCTGCCCCCTTGGTTGTTGCACGCAACGCTTCAGCAAAACCCGCCAATTACAGCTCCTCAGGTTTTTCCAAATACTGCTAGCAAACACCTTCATCATATCATGCCCAGAAAGAACATTTTTAATGCCCCTTCCATGCATTATTCATCTGAAGTTTCTCATTCACAAGTGAAGAGGTCACCAGTTCCTCAGACTGCGGTTCTGCCTCAGCATGTTCAAGTCATTCCAGATGAAAGTCCCAGTTCTGCCATGATAGACATGAGCTACAGGAACAGAATGAATGTCAAAGACAGAATGAAACCAAAACCTTTTGGTATCGAAGACCCTTATCCCTGTAAGAGAACCAAGAGATTAGCAGTTGATTCAACAAACCCTCCTAACATAATCGACTTAGAAGTGCAAGAAAAGTCACGTGTTGTGGCAGGATTGTCGTCAAGCGGGGACTTCATTGATGAAATGCAGTCAAATTTCAGAGCACTTGACCTTGAATCTAGTCAGAAGCAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

926

Amino Acids

103.76

Weight (kDa)

9.0

Isoelectric Point (pI)

53.72

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002724)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G01720
fragaria_vesca	FvH4_1g26200 FvH4_1g26200 FvH4_6g42870 FvH4_6g42870 FvH4_6g42870
malus_domestica	MD09G1111200.v1.1 MD17G1099000.v1.1
prunus_persica	Prupe.3G002300_v2.0.a1 Prupe.3G214800_v2.0.a1
pyrus_communis	pycom09g03370
rosa_chinensis	RchiOBHm_Chr2g0158801 RchiOBHm_Chr3g0485691 RchiOBHm_Chr3g0485711
rosa_laevigata	RLG00000021114 RLG00000023129 RLG00000023130
rosa_multiflora	Rmu_sc0003005.1_g000017 Rmu_sc0003005.1_g000026 Rmu_ssc0000129.1_g000002
rosa_roxburghii	Rroxscaffold_6G00396400 Rroxscaffold_6G00396500 Rroxscaffold_6G00396810 Rroxscaffold_6G00396830
rosa_rugosa	Rorug02G0472600 Rorug03G0220800
rosa_samantha	Rh2AG538400 Rh2BG551100 Rh2CG521600 Rh2DG560900 Rh3AG270000 Rh3AG270200 Rh3BG305800 Rh3CG303900 Rh3CG304200 Rh3DG300200
rosa_wichuraiana	Rw0G006930 Rw0G009910 Rw2G044560

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2020
Acc36I	ACCTGC	4 cut(s)	787, 1288, 2020, 2158
AclWI	GGATC	3 cut(s)	492, 1257, 1270
AcoI	YGGCCR	1 cut(s)	166
AcuI	CTGAAG	2 cut(s)	2291, 2445
AcvI	CACGTG	2 cut(s)	773, 2687
AdeI	CACNNNGTG	1 cut(s)	1190
AfaI	GTAC	3 cut(s)	41, 699, 1539
AfiI	CCNNNNNNNGG	2 cut(s)	523, 908
AflIII	ACRYGT	2 cut(s)	741, 2686
AhlI	ACTAGT	1 cut(s)	659
AjnI	CCWGG	2 cut(s)	589, 1533
Alw21I	GWGCWC	4 cut(s)	1417, 1434, 2047, 2752
Alw26I	GTCTC	2 cut(s)	1023, 1314
Alw44I	GTGCAC	2 cut(s)	1430, 2043
AlwI	GGATC	3 cut(s)	492, 1257, 1270
AlwNI	CAGNNNCTG	1 cut(s)	1012
AoxI	GGCC	3 cut(s)	166, 647, 2275
ApaLI	GTGCAC	2 cut(s)	1430, 2043
ApeKI	GCWGC	6 cut(s)	52, 512, 716, 767, 1947, 2170
Asp700I	GAANNNNTTC	1 cut(s)	1496
AspA2I	CCTAGG	1 cut(s)	797
AspS9I	GGNCC	1 cut(s)	410
AsuHPI	GGTGA	8 cut(s)	344, 1008, 1103, 1202, 1895, 1992, 2001, 2445
AsuII	TTCGAA	1 cut(s)	954
AsuNHI	GCTAGC	1 cut(s)	2354
AvaII	GGWCC	1 cut(s)	410
AvrII	CCTAGG	1 cut(s)	797
AxyI	CCTNAGG	3 cut(s)	1575, 1834, 2334
BaeGI	GKGCMC	2 cut(s)	1434, 2047
BamHI	GGATCC	1 cut(s)	1262
BbrPI	CACGTG	2 cut(s)	773, 2687
BbsI	GAAGAC	1 cut(s)	2601
Bbv12I	GWGCWC	4 cut(s)	1417, 1434, 2047, 2752
BbvCI	CCTCAGC	1 cut(s)	2481
BbvI	GCAGC	6 cut(s)	39, 524, 703, 754, 1959, 2182
BccI	CCATC	4 cut(s)	1027, 1679, 1693, 1782
BceAI	ACGGC	1 cut(s)	153
BcgI	CGANNNNNNTGC	2 cut(s)	2685, 2719
BciT130I	CCWGG	2 cut(s)	591, 1535
BclI	TGATCA	3 cut(s)	619, 886, 1042
BcoDI	GTCTC	2 cut(s)	1023, 1314
BcuI	ACTAGT	1 cut(s)	659
BfmI	CTRYAG	2 cut(s)	1254, 2539
BfuAI	ACCTGC	4 cut(s)	787, 1288, 2020, 2158
BisI	GCNGC	8 cut(s)	53, 513, 650, 717, 768, 874, 1948, 2171
BlnI	CCTAGG	1 cut(s)	797
BlpI	GCTNAGC	1 cut(s)	1719
BlsI	GCNGC	8 cut(s)	54, 514, 651, 718, 769, 875, 1949, 2172
Bme1390I	CCNGG	2 cut(s)	591, 1535
Bme18I	GGWCC	1 cut(s)	410
BmgT120I	GGNCC	1 cut(s)	410
BmiI	GGNNCC	3 cut(s)	868, 1264, 1857
BmrFI	CCNGG	2 cut(s)	591, 1535
BmrI	ACTGGG	1 cut(s)	2508
BmsI	GCATC	5 cut(s)	145, 907, 1508, 1512, 2182
BmtI	GCTAGC	1 cut(s)	2358
BmuI	ACTGGG	1 cut(s)	2508
BpiI	GAAGAC	1 cut(s)	2601
BpmI	CTGGAG	5 cut(s)	87, 708, 1252, 1869, 1945
Bpu10I	CCTNAGC	2 cut(s)	243, 2481
Bpu1102I	GCTNAGC	1 cut(s)	1719
Bpu14I	TTCGAA	1 cut(s)	954
BpuEI	CTTGAG	2 cut(s)	266, 822
BsaAI	YACGTR	2 cut(s)	773, 2687
BsaJI	CCNNGG	3 cut(s)	797, 907, 2285
BsaXI	ACNNNNNCTCC	2 cut(s)	2632, 2662
Bsc4I	CCNNNNNNNGG	2 cut(s)	523, 908
Bse1I	ACTGG	9 cut(s)	18, 104, 169, 1060, 1127, 1269, 2160, 2456, 2514
Bse21I	CCTNAGG	3 cut(s)	1575, 1834, 2334
BseBI	CCWGG	2 cut(s)	591, 1535
BseDI	CCNNGG	3 cut(s)	797, 907, 2285
BseGI	GGATG	9 cut(s)	227, 403, 898, 1159, 1471, 1690, 1704, 1881, 2173
BseLI	CCNNNNNNNGG	2 cut(s)	523, 908
BseMII	CTCAG	7 cut(s)	914, 1710, 2009, 2108, 2348, 2477, 2495
BseNI	ACTGG	9 cut(s)	18, 104, 169, 1060, 1127, 1269, 2160, 2456, 2514
BseRI	GAGGAG	2 cut(s)	2254, 2322
BseSI	GKGCMC	2 cut(s)	1434, 2047
BseXI	GCAGC	6 cut(s)	39, 524, 703, 754, 1959, 2182
BseYI	CCCAGC	1 cut(s)	1237
BsgI	GTGCAG	4 cut(s)	38, 753, 903, 1037
BshFI	GGCC	3 cut(s)	168, 649, 2277
BsiHKAI	GWGCWC	4 cut(s)	1417, 1434, 2047, 2752
BslFI	GGGAC	3 cut(s)	1575, 2496, 2729
BslI	CCNNNNNNNGG	2 cut(s)	523, 908
BsmAI	GTCTC	2 cut(s)	1023, 1314
BsmFI	GGGAC	3 cut(s)	1575, 2496, 2729
BsmI	GAATGC	2 cut(s)	792, 1496
BsnI	GGCC	3 cut(s)	168, 649, 2277
Bsp119I	TTCGAA	1 cut(s)	954
Bsp1286I	GDGCHC	4 cut(s)	1417, 1434, 2047, 2752
Bsp143I	GATC	6 cut(s)	220, 484, 619, 886, 1042, 1262
Bsp1720I	GCTNAGC	1 cut(s)	1719
Bsp19I	CCATGG	1 cut(s)	907
BspANI	GGCC	3 cut(s)	168, 649, 2277
BspCNI	CTCAG	7 cut(s)	915, 1711, 2008, 2107, 2347, 2476, 2494
BspLI	GGNNCC	3 cut(s)	868, 1264, 1857
BspMI	ACCTGC	4 cut(s)	787, 1288, 2020, 2158
BspOI	GCTAGC	1 cut(s)	2358
BspPI	GGATC	3 cut(s)	492, 1257, 1270
BspT104I	TTCGAA	1 cut(s)	954
BsrI	ACTGG	9 cut(s)	18, 104, 169, 1060, 1127, 1269, 2160, 2456, 2514
BssECI	CCNNGG	3 cut(s)	797, 907, 2285
BssMI	GATC	6 cut(s)	220, 484, 619, 886, 1042, 1262
BssT1I	CCWWGG	3 cut(s)	797, 907, 2285
Bst2UI	CCWGG	2 cut(s)	591, 1535
Bst4CI	ACNGT	9 cut(s)	500, 850, 1203, 1255, 1527, 1658, 1822, 2049, 2085
Bst6I	CTCTTC	3 cut(s)	203, 529, 2441
BstAPI	GCANNNNNTGC	1 cut(s)	1518
BstBAI	YACGTR	2 cut(s)	773, 2687
BstBI	TTCGAA	1 cut(s)	954
BstC8I	GCNNGC	7 cut(s)	580, 790, 2168, 2275, 2279, 2298, 2356
BstDSI	CCRYGG	1 cut(s)	907
BstEII	GGTNACC	1 cut(s)	2451
BstF5I	GGATG	9 cut(s)	227, 403, 898, 1159, 1471, 1690, 1704, 1881, 2173
BstKTI	GATC	6 cut(s)	223, 487, 622, 889, 1045, 1265
BstMAI	GTCTC	2 cut(s)	1023, 1314
BstMBI	GATC	6 cut(s)	220, 484, 619, 886, 1042, 1262
BstMWI	GCNNNNNNNGC	6 cut(s)	253, 1458, 1509, 1518, 2302, 2317
BstNI	CCWGG	2 cut(s)	591, 1535
BstNSI	RCATGY	3 cut(s)	380, 745, 2489
BstPI	GGTNACC	1 cut(s)	2451
BstSCI	CCNGG	2 cut(s)	589, 1533
BstSFI	CTRYAG	2 cut(s)	1254, 2539
BstSLI	GKGCMC	2 cut(s)	1434, 2047
BstV1I	GCAGC	6 cut(s)	39, 524, 703, 754, 1959, 2182
BstV2I	GAAGAC	1 cut(s)	2601
BstX2I	RGATCY	1 cut(s)	1262
BstYI	RGATCY	1 cut(s)	1262
Bsu36I	CCTNAGG	3 cut(s)	1575, 1834, 2334
BsuRI	GGCC	3 cut(s)	168, 649, 2277
BtgI	CCRYGG	1 cut(s)	907
BtsCI	GGATG	9 cut(s)	227, 403, 898, 1159, 1471, 1690, 1704, 1881, 2173
BtsI	GCAGTG	2 cut(s)	1118, 1852
BtsIMutI	CAGTG	4 cut(s)	505, 920, 1118, 1852
BveI	ACCTGC	4 cut(s)	787, 1288, 2020, 2158
Cac8I	GCNNGC	7 cut(s)	580, 790, 2168, 2275, 2279, 2298, 2356
CaiI	CAGNNNCTG	1 cut(s)	1012
Cfr13I	GGNCC	1 cut(s)	410
CsiI	ACCWGGT	1 cut(s)	1533
Csp6I	GTAC	3 cut(s)	40, 698, 1538
CviQI	GTAC	3 cut(s)	40, 698, 1538
DpnI	GATC	6 cut(s)	222, 486, 621, 888, 1044, 1264
DpnII	GATC	6 cut(s)	220, 484, 619, 886, 1042, 1262
DraIII	CACNNNGTG	1 cut(s)	1190
EaeI	YGGCCR	1 cut(s)	166
Eam1104I	CTCTTC	3 cut(s)	203, 529, 2441
EarI	CTCTTC	3 cut(s)	203, 529, 2441
EciI	GGCGGA	1 cut(s)	1578
Eco130I	CCWWGG	3 cut(s)	797, 907, 2285
Eco32I	GATATC	1 cut(s)	807
Eco47I	GGWCC	1 cut(s)	410
Eco57I	CTGAAG	2 cut(s)	2291, 2445
Eco72I	CACGTG	2 cut(s)	773, 2687
Eco81I	CCTNAGG	3 cut(s)	1575, 1834, 2334
Eco91I	GGTNACC	1 cut(s)	2451
EcoO65I	GGTNACC	1 cut(s)	2451
EcoRI	GAATTC	1 cut(s)	1750
EcoRII	CCWGG	2 cut(s)	589, 1533
EcoRV	GATATC	1 cut(s)	807
EcoT14I	CCWWGG	3 cut(s)	797, 907, 2285
EcoT22I	ATGCAT	1 cut(s)	2415
ErhI	CCWWGG	3 cut(s)	797, 907, 2285
FaqI	GGGAC	3 cut(s)	1575, 2496, 2729
FauI	CCCGC	2 cut(s)	2325, 2705
FauNDI	CATATG	1 cut(s)	784
FbaI	TGATCA	3 cut(s)	619, 886, 1042
Fnu4HI	GCNGC	8 cut(s)	53, 513, 650, 717, 768, 874, 1948, 2171
FokI	GGATG	9 cut(s)	214, 410, 885, 1166, 1458, 1697, 1711, 1888, 2160
Fsp4HI	GCNGC	8 cut(s)	53, 513, 650, 717, 768, 874, 1948, 2171
GluI	GCNGC	8 cut(s)	53, 513, 650, 717, 768, 874, 1948, 2171
GsaI	CCCAGC	1 cut(s)	1241
GsuI	CTGGAG	5 cut(s)	87, 708, 1252, 1869, 1945
HaeIII	GGCC	3 cut(s)	168, 649, 2277
HincII	GTYRAC	1 cut(s)	529
HindII	GTYRAC	1 cut(s)	529
HindIII	AAGCTT	1 cut(s)	1691
HphI	GGTGA	8 cut(s)	344, 1008, 1103, 1202, 1895, 1992, 2001, 2445
HpyAV	CCTTC	9 cut(s)	127, 323, 366, 475, 588, 969, 1740, 2375, 2415
HpyCH4III	ACNGT	9 cut(s)	500, 850, 1203, 1255, 1527, 1658, 1822, 2049, 2085
HpyCH4IV	ACGT	6 cut(s)	42, 624, 772, 1069, 1083, 2686
HpyF10VI	GCNNNNNNNGC	6 cut(s)	253, 1458, 1509, 1518, 2302, 2317
HpySE526I	ACGT	6 cut(s)	42, 624, 772, 1069, 1083, 2686
Ksp22I	TGATCA	3 cut(s)	619, 886, 1042
Kzo9I	GATC	6 cut(s)	220, 484, 619, 886, 1042, 1262
LmnI	GCTCC	5 cut(s)	944, 1449, 1861, 1888, 2335
Lsp1109I	GCAGC	6 cut(s)	39, 524, 703, 754, 1959, 2182
LweI	GCATC	5 cut(s)	145, 907, 1508, 1512, 2182
MabI	ACCWGGT	1 cut(s)	1533
MaeII	ACGT	6 cut(s)	42, 624, 772, 1069, 1083, 2686
MaeIII	GTNAC	9 cut(s)	160, 1014, 1091, 1129, 1396, 1652, 1998, 2451, 2682
MalI	GATC	6 cut(s)	222, 486, 621, 888, 1044, 1264
MboI	GATC	6 cut(s)	220, 484, 619, 886, 1042, 1262
MboII	GAAGA	7 cut(s)	220, 423, 546, 830, 1746, 2458, 2606
MfeI	CAATTG	2 cut(s)	519, 1647
MflI	RGATCY	1 cut(s)	1262
MhlI	GDGCHC	4 cut(s)	1417, 1434, 2047, 2752
MlyI	GAGTC	1 cut(s)	1088
Mph1103I	ATGCAT	1 cut(s)	2415
MroXI	GAANNNNTTC	1 cut(s)	1496
MseI	TTAA	5 cut(s)	1328, 1530, 1628, 2144, 2397
MspA1I	CMGCKG	3 cut(s)	767, 873, 1237
MspR9I	CCNGG	2 cut(s)	591, 1535
MunI	CAATTG	2 cut(s)	519, 1647
Mva1269I	GAATGC	2 cut(s)	792, 1496
MvaI	CCWGG	2 cut(s)	591, 1535
MwoI	GCNNNNNNNGC	6 cut(s)	253, 1458, 1509, 1518, 2302, 2317
NcoI	CCATGG	1 cut(s)	907
NdeI	CATATG	1 cut(s)	784
NdeII	GATC	6 cut(s)	220, 484, 619, 886, 1042, 1262
NheI	GCTAGC	1 cut(s)	2354
NlaIV	GGNNCC	3 cut(s)	868, 1264, 1857
NmuCI	GTSAC	6 cut(s)	160, 1014, 1091, 1998, 2451, 2682
NsiI	ATGCAT	1 cut(s)	2415
NspI	RCATGY	3 cut(s)	380, 745, 2489
NspV	TTCGAA	1 cut(s)	954
PaqCI	CACCTGC	1 cut(s)	2020
PciI	ACATGT	1 cut(s)	741
PctI	GAATGC	2 cut(s)	792, 1496
PdmI	GAANNNNTTC	1 cut(s)	1496
PkrI	GCNGC	8 cut(s)	54, 514, 651, 718, 769, 875, 1949, 2172
PleI	GAGTC	1 cut(s)	1088
PmaCI	CACGTG	2 cut(s)	773, 2687
PmlI	CACGTG	2 cut(s)	773, 2687
PpsI	GAGTC	1 cut(s)	1088
Ppu21I	YACGTR	2 cut(s)	773, 2687
PscI	ACATGT	1 cut(s)	741
Psp6I	CCWGG	2 cut(s)	589, 1533
PspCI	CACGTG	2 cut(s)	773, 2687
PspEI	GGTNACC	1 cut(s)	2451
PspFI	CCCAGC	1 cut(s)	1237
PspGI	CCWGG	2 cut(s)	589, 1533
PspN4I	GGNNCC	3 cut(s)	868, 1264, 1857
PspPI	GGNCC	1 cut(s)	410
PsrI	GAACNNNNNNTAC	2 cut(s)	948, 980
PstNI	CAGNNNCTG	1 cut(s)	1012
PsuI	RGATCY	1 cut(s)	1262
PvuII	CAGCTG	1 cut(s)	1237
RsaI	GTAC	3 cut(s)	41, 699, 1539
RsaNI	GTAC	3 cut(s)	40, 698, 1538
SaqAI	TTAA	5 cut(s)	1328, 1530, 1628, 2144, 2397
SatI	GCNGC	8 cut(s)	53, 513, 650, 717, 768, 874, 1948, 2171
Sau3AI	GATC	6 cut(s)	220, 484, 619, 886, 1042, 1262
Sau96I	GGNCC	1 cut(s)	410
SchI	GAGTC	1 cut(s)	1088
ScrFI	CCNGG	2 cut(s)	591, 1535
SduI	GDGCHC	4 cut(s)	1417, 1434, 2047, 2752
SexAI	ACCWGGT	1 cut(s)	1533
SfaNI	GCATC	5 cut(s)	145, 907, 1508, 1512, 2182
SfcI	CTRYAG	2 cut(s)	1254, 2539
SfuI	TTCGAA	1 cut(s)	954
SinI	GGWCC	1 cut(s)	410
SmlI	CTYRAG	2 cut(s)	281, 837
SmoI	CTYRAG	2 cut(s)	281, 837
SpeI	ACTAGT	1 cut(s)	659
SspI	AATATT	1 cut(s)	194
StyD4I	CCNGG	2 cut(s)	589, 1533
StyI	CCWWGG	3 cut(s)	797, 907, 2285
TaaI	ACNGT	9 cut(s)	500, 850, 1203, 1255, 1527, 1658, 1822, 2049, 2085
TaiI	ACGT	6 cut(s)	45, 627, 775, 1072, 1086, 2689
TaqI	TCGA	3 cut(s)	954, 2592, 2661
TauI	GCSGC	2 cut(s)	652, 876
Tru1I	TTAA	5 cut(s)	1328, 1530, 1628, 2144, 2397
Tru9I	TTAA	5 cut(s)	1328, 1530, 1628, 2144, 2397
TscAI	CASTG	4 cut(s)	505, 927, 1118, 1852
TseFI	GTSAC	6 cut(s)	160, 1014, 1091, 1998, 2451, 2682
TseI	GCWGC	6 cut(s)	52, 512, 716, 767, 1947, 2170
Tsp45I	GTSAC	6 cut(s)	160, 1014, 1091, 1998, 2451, 2682
TspGWI	ACGGA	2 cut(s)	1154, 1888
TspRI	CASTG	4 cut(s)	505, 927, 1118, 1852
VneI	GTGCAC	2 cut(s)	1430, 2043
VpaK11BI	GGWCC	1 cut(s)	410
XbaI	TCTAGA	2 cut(s)	814, 2057
XceI	RCATGY	3 cut(s)	380, 745, 2489
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1110, 1442
XmaJI	CCTAGG	1 cut(s)	797
XmnI	GAANNNNTTC	1 cut(s)	1496
Zsp2I	ATGCAT	1 cut(s)	2415

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.