Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2B

Orthogroup ID

OG0002724

Physical Location & Seq

Genomic Coordinates Forward (+)

76001660 .. 76005005

Gene Structure 3346 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2BG551100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1671 bp

ATGGATCATCACACCCACCAAGCCCGGTCACCACCACCGCCCCAGACTCTGCAATTCTCAGTCAACCTCAACTGCACCGACGATAACGACGACCGAGAAAACTCGCCGCCGCAATCGGACGACAACCAGCGCAAGGTCGTAGACGAGAGGGACTTCTTTGCCGATAACAACAACAAGGCCGAGGAAGCTTCCACTGAGAAAATGGACTTCGACGATGGCCCTTCCGGCATGGAATTCAACGTAAACACTGGGTTAAATCTTCTCATCACAAACACTAGTAGTGACCAGTCAGTTGTGGATGATAGCATTTCGTCGAGCATGGAGGATAAAAGAGCCAAAAGTGAGCTGGCTGTTCTTCAAGCCGAGCTGGAGAGGATGAACGCGGAGAATCAGAGGCTGAGAGAGATGCTTAATCAGGTCACTACCAATTACAGTGCTCTACAAGTGCATTTGCTGAGTTTGATGCAAAACCAGAAGGCTGAGAACAGCGTGGAAGTGGAAGAGAAGAAGCTTAATAATGGCAGCGGATCGCAGATGGTGGTTCCGAGGCAGTTTATGGATCTTGGTTTGGCTGCAAATGGGGATGCCGAAGAGCCGTCACATTCTTCTTCGGATGAGAGAAGCCGGGAACGGTCTGGATCAGGTGATAATGGAAAGGTTGGTGCTGGGAATGTTGGTGATGAGGGGCCTGCGTTTGATCAGGAGAAGAAGGAATTTGGTCGGGGGATTAGTGGGAGAGAGGAGAGTCCTGATCAACAAACGCAGAGTTGGGGACCTAACAAAGTTCCGAGACTCAATTCTCCGAAGGAGGTTGATCAAACTGAGGCTACAATGAGGAAGGCTCGGGTTTCTGTTAGAGCTCGATCAGAGGCACCCATGATCACTGATGGATGTCAATGGCGTAAGTACGGGCAAAAGATGGCGAAAGGAAACCCATGTCCTCGAGCTTATTATAGATGCACCATGGCTGCTGGTTGCCCAGTTCGAAAACAAGTACAAAGATGTGCTGAAGATAGGACAATCCTCATCACAACATATGAAGGCAATCACAACCACCCATTGCCACCAGCCGCCATGGCAATGGCGTCCACCACTTCATCTGCAGCCCGGATGCTGCTTTCCGGGTCTATGCCAAGCGCGGATGGCCTAATGGACTCAAACTTCCTCACTAGGACCATCCTCCCATGCTCCTCAAGCATGGCCACAATCTCAGCCTCAGCTCCATTCCCCACTGTTACATTGGACTTAACACAGTCCCCAAACCCTTTACAGTTCCAAAGGCCACCAGGCCAATTCAACATCCCATTCCCAAACCCGTCTCAGAACTTGACCAATGGACCTGTCTCATTGCTGCCCCAAATCTTCGGTCAGGCGCTTTACAACCAGTCTAAGTTTTCTGGCCTTCAAATGTCACAGGACATGGACCGTAATGCCCATCCTCAACAAGCTCAGCAAGGACAGCAGCAGAACTCATTGGCCGATACTGTTACTGCTGCCACTGCCGCTATCGCATCCGATCCAAACTTCACTGCAGCTCTAGCAGCCGCCATCACCTCCATCATTGGCAATGCTCATCCAAACAACAATGGTAACAATTCTACCACCAACAACAACACAAGCAACAGCAGTGGCAATGGAAACAACAGCAGCAAATTGCAACAACAAGATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001067 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0006355 GO:0006950 GO:0007154 GO:0008150 GO:0009267 GO:0009605 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0009991 GO:0010033 GO:0010036 GO:0010200 GO:0010243 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0016036 GO:0019219 GO:0019222 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031667 GO:0031668 GO:0031669 GO:0033554 GO:0042221 GO:0042493 GO:0042594 GO:0044212 GO:0045892 GO:0045934 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0051716 GO:0060255 GO:0065007 GO:0070887 GO:0071496 GO:0080029 GO:0080090 GO:0080169 GO:0097159 GO:0140110 GO:1901363 GO:1901698 GO:1901700 GO:1902679 GO:1903506 GO:1903507 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

WRKY

Protein Analysis

556

Amino Acids

60.39

Weight (kDa)

5.13

Isoelectric Point (pI)

45.69

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WRKY	PF03106	296 - 353	1.1e-25	WRKY DNA -binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002724)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G01720
fragaria_vesca	FvH4_1g26200 FvH4_1g26200 FvH4_6g42870 FvH4_6g42870 FvH4_6g42870
malus_domestica	MD09G1111200.v1.1 MD17G1099000.v1.1
prunus_persica	Prupe.3G002300_v2.0.a1 Prupe.3G214800_v2.0.a1
pyrus_communis	pycom09g03370
rosa_chinensis	RchiOBHm_Chr2g0158801 RchiOBHm_Chr3g0485691 RchiOBHm_Chr3g0485711
rosa_laevigata	RLG00000021114 RLG00000023129 RLG00000023130
rosa_multiflora	Rmu_sc0003005.1_g000017 Rmu_sc0003005.1_g000026 Rmu_ssc0000129.1_g000002
rosa_roxburghii	Rroxscaffold_6G00396400 Rroxscaffold_6G00396500 Rroxscaffold_6G00396810 Rroxscaffold_6G00396830
rosa_rugosa	Rorug02G0472600 Rorug03G0220800
rosa_samantha	Rh2AG538400 Rh2BG551100 Rh2CG521600 Rh2DG560900 Rh3AG270000 Rh3AG270200 Rh3BG305800 Rh3CG303900 Rh3CG304200 Rh3DG300200
rosa_wichuraiana	Rw0G006930 Rw0G009910 Rw2G044560

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	871
AccI	GTMKAC	1 cut(s)	141
AccII	CGCG	2 cut(s)	383, 1139
AciI	CCGC	9 cut(s)	38, 107, 110, 383, 525, 1071, 1139, 1503, 1545
AclWI	GGATC	5 cut(s)	12, 535, 567, 646, 1511
AcoI	YGGCCR	2 cut(s)	1200, 1476
AcsI	RAATTY	2 cut(s)	233, 713
AcuI	CTGAAG	1 cut(s)	1029
AcyI	GRCGYC	1 cut(s)	1085
AfaI	GTAC	2 cut(s)	908, 996
AfiI	CCNNNNNNNGG	1 cut(s)	133
AgsI	TTSAA	4 cut(s)	238, 359, 1297, 1406
AhlI	ACTAGT	1 cut(s)	275
AjnI	CCWGG	1 cut(s)	1285
AluBI	AGCT	9 cut(s)	188, 346, 367, 511, 860, 947, 1220, 1448, 1535
AluI	AGCT	9 cut(s)	188, 346, 367, 511, 860, 947, 1220, 1448, 1535
Alw21I	GWGCWC	2 cut(s)	439, 862
Alw26I	GTCTC	3 cut(s)	784, 1323, 1348
AlwI	GGATC	5 cut(s)	12, 535, 567, 646, 1511
AlwNI	CAGNNNCTG	2 cut(s)	49, 397
Ama87I	CYCGRG	2 cut(s)	843, 942
AoxI	GGCC	9 cut(s)	177, 217, 686, 1144, 1200, 1280, 1288, 1399, 1476
ApoI	RAATTY	2 cut(s)	233, 713
ArsI	GACNNNNNNTTYG	2 cut(s)	1351, 1383
AspLEI	GCGC	3 cut(s)	132, 1139, 1375
AspS9I	GGNCC	6 cut(s)	218, 686, 773, 1173, 1337, 1423
AsuC2I	CCSGG	4 cut(s)	25, 626, 1108, 1123
AsuHPI	GGTGA	4 cut(s)	21, 656, 689, 1543
AsuII	TTCGAA	1 cut(s)	985
AvaI	CYCGRG	2 cut(s)	843, 942
AvaII	GGWCC	4 cut(s)	773, 1173, 1337, 1423
BalI	TGGCCA	1 cut(s)	1202
BanI	GGYRCC	1 cut(s)	871
BanII	GRGCYC	1 cut(s)	862
Bbv12I	GWGCWC	2 cut(s)	439, 862
BbvCI	CCTCAGC	1 cut(s)	1216
BccI	CCATC	9 cut(s)	209, 529, 881, 913, 1136, 1184, 1443, 1556, 1565
BceAI	ACGGC	1 cut(s)	580
BciT130I	CCWGG	1 cut(s)	1287
BclI	TGATCA	4 cut(s)	697, 751, 814, 879
BcnI	CCSGG	4 cut(s)	25, 626, 1108, 1123
BcoDI	GTCTC	3 cut(s)	784, 1323, 1348
BcuI	ACTAGT	1 cut(s)	275
BfaI	CTAG	3 cut(s)	276, 1170, 1538
BfmI	CTRYAG	2 cut(s)	1101, 1530
BfoI	RGCGCY	1 cut(s)	1376
BglI	GCCNNNNNGGC	2 cut(s)	225, 1076
BlpI	GCTNAGC	1 cut(s)	1449
Bme1390I	CCNGG	5 cut(s)	25, 626, 1108, 1123, 1287
Bme18I	GGWCC	4 cut(s)	773, 1173, 1337, 1423
BmeT110I	CYCGRG	2 cut(s)	843, 942
BmgT120I	GGNCC	6 cut(s)	218, 686, 773, 1173, 1337, 1423
BmiI	GGNNCC	4 cut(s)	543, 687, 774, 873
BmrFI	CCNGG	5 cut(s)	25, 626, 1108, 1123, 1287
BmrI	ACTGGG	2 cut(s)	258, 974
BmsI	GCATC	6 cut(s)	396, 453, 574, 947, 1101, 1520
BmuI	ACTGGG	2 cut(s)	258, 974
BplI	GAGNNNNNCTC	2 cut(s)	826, 858
BpmI	CTGGAG	1 cut(s)	389
Bpu10I	CCTNAGC	1 cut(s)	1216
Bpu1102I	GCTNAGC	1 cut(s)	1449
Bpu14I	TTCGAA	1 cut(s)	985
BpuEI	CTTGAG	1 cut(s)	1177
BpuMI	CCSGG	4 cut(s)	25, 626, 1108, 1123
BsaHI	GRCGYC	1 cut(s)	1085
BsaJI	CCNNGG	4 cut(s)	180, 545, 963, 1074
Bsc4I	CCNNNNNNNGG	1 cut(s)	133
Bse1I	ACTGG	4 cut(s)	253, 286, 980, 1384
Bse3DI	GCAATG	5 cut(s)	1058, 1086, 1346, 1573, 1639
BseBI	CCWGG	1 cut(s)	1287
BseDI	CCNNGG	4 cut(s)	180, 545, 963, 1074
BseLI	CCNNNNNNNGG	1 cut(s)	133
BseMI	GCAATG	5 cut(s)	1058, 1086, 1346, 1573, 1639
BseNI	ACTGG	4 cut(s)	253, 286, 980, 1384
BseRI	GAGGAG	2 cut(s)	755, 1180
BseYI	CCCAGC	1 cut(s)	665
BsgI	GTGCAG	1 cut(s)	58
Bsh1236I	CGCG	2 cut(s)	383, 1139
Bsh1285I	CGRYCG	1 cut(s)	94
BshFI	GGCC	9 cut(s)	179, 219, 688, 1146, 1202, 1282, 1290, 1401, 1478
BshNI	GGYRCC	1 cut(s)	871
BsiEI	CGRYCG	1 cut(s)	94
BsiHKAI	GWGCWC	2 cut(s)	439, 862
BsiHKCI	CYCGRG	2 cut(s)	843, 942
BsiSI	CCGG	5 cut(s)	25, 225, 625, 1108, 1122
BslFI	GGGAC	3 cut(s)	164, 786, 1240
BslI	CCNNNNNNNGG	1 cut(s)	133
BsmAI	GTCTC	3 cut(s)	784, 1323, 1348
BsmBI	CGTCTC	1 cut(s)	1323
BsmFI	GGGAC	3 cut(s)	164, 786, 1240
BsnI	GGCC	9 cut(s)	179, 219, 688, 1146, 1202, 1282, 1290, 1401, 1478
BsoBI	CYCGRG	2 cut(s)	843, 942
Bsp119I	TTCGAA	1 cut(s)	985
Bsp1286I	GDGCHC	2 cut(s)	439, 862
Bsp1720I	GCTNAGC	1 cut(s)	1449
Bsp19I	CCATGG	2 cut(s)	963, 1074
BspACI	CCGC	9 cut(s)	38, 107, 110, 383, 525, 1071, 1139, 1503, 1545
BspANI	GGCC	9 cut(s)	179, 219, 688, 1146, 1202, 1282, 1290, 1401, 1478
BspFNI	CGCG	2 cut(s)	383, 1139
BspLI	GGNNCC	4 cut(s)	543, 687, 774, 873
BspMAI	CTGCAG	2 cut(s)	1105, 1534
BspPI	GGATC	5 cut(s)	12, 535, 567, 646, 1511
BspQI	GCTCTTC	1 cut(s)	585
BspT104I	TTCGAA	1 cut(s)	985
BspT107I	GGYRCC	1 cut(s)	871
BsrDI	GCAATG	5 cut(s)	1058, 1086, 1346, 1573, 1639
BsrI	ACTGG	4 cut(s)	253, 286, 980, 1384
BssECI	CCNNGG	4 cut(s)	180, 545, 963, 1074
BssNI	GRCGYC	1 cut(s)	1085
BssT1I	CCWWGG	2 cut(s)	963, 1074
Bst2UI	CCWGG	1 cut(s)	1287
Bst4CI	ACNGT	7 cut(s)	434, 633, 1234, 1254, 1272, 1427, 1486
Bst6I	CTCTTC	2 cut(s)	495, 585
BstACI	GRCGYC	1 cut(s)	1085
BstBI	TTCGAA	1 cut(s)	985
BstC8I	GCNNGC	2 cut(s)	348, 690
BstDSI	CCRYGG	2 cut(s)	963, 1074
BstEII	GGTNACC	1 cut(s)	27
BstFNI	CGCG	2 cut(s)	383, 1139
BstH2I	RGCGCY	1 cut(s)	1376
BstHHI	GCGC	3 cut(s)	132, 1139, 1375
BstMAI	GTCTC	3 cut(s)	784, 1323, 1348
BstMCI	CGRYCG	1 cut(s)	94
BstNI	CCWGG	1 cut(s)	1287
BstPI	GGTNACC	1 cut(s)	27
BstSCI	CCNGG	5 cut(s)	23, 624, 1106, 1121, 1285
BstSFI	CTRYAG	2 cut(s)	1101, 1530
BstUI	CGCG	2 cut(s)	383, 1139
BstX2I	RGATCY	1 cut(s)	559
BstXI	CCANNNNNNTGG	1 cut(s)	1081
BstYI	RGATCY	1 cut(s)	559
BsuRI	GGCC	9 cut(s)	179, 219, 688, 1146, 1202, 1282, 1290, 1401, 1478
BtgI	CCRYGG	2 cut(s)	963, 1074
BtsI	GCAGTG	3 cut(s)	1497, 1527, 1633
BtsIMutI	CAGTG	8 cut(s)	192, 246, 439, 882, 1230, 1497, 1527, 1633
Cac8I	GCNNGC	2 cut(s)	348, 690
CaiI	CAGNNNCTG	2 cut(s)	49, 397
CfoI	GCGC	3 cut(s)	132, 1139, 1375
Cfr13I	GGNCC	6 cut(s)	218, 686, 773, 1173, 1337, 1423
CseI	GACGC	1 cut(s)	1074
Csp6I	GTAC	2 cut(s)	907, 995
CspCI	CAANNNNNGTGG	2 cut(s)	1609, 1644
CviAII	CATG	9 cut(s)	229, 319, 877, 936, 964, 1075, 1185, 1198, 1420
CviQI	GTAC	2 cut(s)	907, 995
EaeI	YGGCCR	2 cut(s)	1200, 1476
Eam1104I	CTCTTC	2 cut(s)	495, 585
EarI	CTCTTC	2 cut(s)	495, 585
Ecl136II	GAGCTC	1 cut(s)	860
Eco130I	CCWWGG	2 cut(s)	963, 1074
Eco24I	GRGCYC	1 cut(s)	862
Eco47I	GGWCC	4 cut(s)	773, 1173, 1337, 1423
Eco53kI	GAGCTC	1 cut(s)	860
Eco57I	CTGAAG	1 cut(s)	1029
Eco88I	CYCGRG	2 cut(s)	843, 942
Eco91I	GGTNACC	1 cut(s)	27
EcoICRI	GAGCTC	1 cut(s)	860
EcoO109I	RGGNCCY	2 cut(s)	686, 773
EcoO65I	GGTNACC	1 cut(s)	27
EcoRI	GAATTC	1 cut(s)	233
EcoRII	CCWGG	1 cut(s)	1285
EcoT14I	CCWWGG	2 cut(s)	963, 1074
EcoT38I	GRGCYC	1 cut(s)	862
ErhI	CCWWGG	2 cut(s)	963, 1074
Esp3I	CGTCTC	1 cut(s)	1323
FaeI	CATG	9 cut(s)	232, 322, 880, 939, 967, 1078, 1188, 1201, 1423
FaqI	GGGAC	3 cut(s)	164, 786, 1240
FatI	CATG	9 cut(s)	228, 318, 876, 935, 963, 1074, 1184, 1197, 1419
FauNDI	CATATG	1 cut(s)	1036
FbaI	TGATCA	4 cut(s)	697, 751, 814, 879
FblI	GTMKAC	1 cut(s)	141
FriOI	GRGCYC	1 cut(s)	862
FspBI	CTAG	3 cut(s)	276, 1170, 1538
GlaI	GCGC	3 cut(s)	131, 1138, 1374
GsaI	CCCAGC	1 cut(s)	669
GsuI	CTGGAG	1 cut(s)	389
HaeII	RGCGCY	1 cut(s)	1376
HaeIII	GGCC	9 cut(s)	179, 219, 688, 1146, 1202, 1282, 1290, 1401, 1478
HapII	CCGG	5 cut(s)	25, 225, 625, 1108, 1122
HgaI	GACGC	1 cut(s)	1074
HhaI	GCGC	3 cut(s)	132, 1139, 1375
Hin1I	GRCGYC	1 cut(s)	1085
Hin1II	CATG	9 cut(s)	232, 322, 880, 939, 967, 1078, 1188, 1201, 1423
Hin6I	GCGC	3 cut(s)	130, 1137, 1373
HinP1I	GCGC	3 cut(s)	130, 1137, 1373
HincII	GTYRAC	1 cut(s)	64
HindII	GTYRAC	1 cut(s)	64
HindIII	AAGCTT	2 cut(s)	186, 509
HinfI	GANTC	5 cut(s)	46, 388, 745, 792, 1154
HpaII	CCGG	5 cut(s)	25, 225, 625, 1108, 1122
HphI	GGTGA	4 cut(s)	21, 656, 689, 1543
Hpy166II	GTNNAC	4 cut(s)	64, 142, 244, 1089
Hpy188I	TCNGA	9 cut(s)	118, 393, 546, 613, 789, 804, 868, 1323, 1516
Hpy188III	TCNNGA	3 cut(s)	636, 701, 749
Hpy8I	GTNNAC	4 cut(s)	64, 142, 244, 1089
Hpy99I	CGWCG	4 cut(s)	83, 92, 215, 316
HpyAV	CCTTC	7 cut(s)	231, 469, 703, 799, 832, 1034, 1412
HpyCH4III	ACNGT	7 cut(s)	434, 633, 1234, 1254, 1272, 1427, 1486
HpyCH4IV	ACGT	1 cut(s)	240
HpyCH4V	TGCA	9 cut(s)	52, 75, 448, 466, 575, 960, 1103, 1532, 1657
HpySE526I	ACGT	1 cut(s)	240
Hsp92I	GRCGYC	1 cut(s)	1085
Hsp92II	CATG	9 cut(s)	232, 322, 880, 939, 967, 1078, 1188, 1201, 1423
HspAI	GCGC	3 cut(s)	130, 1137, 1373
Ksp22I	TGATCA	4 cut(s)	697, 751, 814, 879
LguI	GCTCTTC	1 cut(s)	585
LmnI	GCTCC	2 cut(s)	1193, 1225
LweI	GCATC	6 cut(s)	396, 453, 574, 947, 1101, 1520
MaeI	CTAG	3 cut(s)	276, 1170, 1538
MaeII	ACGT	1 cut(s)	240
MaeIII	GTNAC	8 cut(s)	27, 281, 418, 597, 1234, 1410, 1486, 1589
MflI	RGATCY	1 cut(s)	559
MhlI	GDGCHC	2 cut(s)	439, 862
MlsI	TGGCCA	1 cut(s)	1202
MluCI	AATT	8 cut(s)	53, 233, 427, 713, 796, 1292, 1594, 1652
MluNI	TGGCCA	1 cut(s)	1202
MlyI	GAGTC	4 cut(s)	40, 754, 786, 1148
Mox20I	TGGCCA	1 cut(s)	1202
MscI	TGGCCA	1 cut(s)	1202
MseI	TTAA	4 cut(s)	254, 411, 513, 1247
MslI	CAYNNNNRTG	1 cut(s)	1079
Msp20I	TGGCCA	1 cut(s)	1202
MspA1I	CMGCKG	1 cut(s)	525
MspI	CCGG	5 cut(s)	25, 225, 625, 1108, 1122
MspR9I	CCNGG	5 cut(s)	25, 626, 1108, 1123, 1287
MvaI	CCWGG	1 cut(s)	1287
MvnI	CGCG	2 cut(s)	383, 1139
NciI	CCSGG	4 cut(s)	25, 626, 1108, 1123
NcoI	CCATGG	2 cut(s)	963, 1074
NdeI	CATATG	1 cut(s)	1036
NlaIII	CATG	9 cut(s)	232, 322, 880, 939, 967, 1078, 1188, 1201, 1423
NlaIV	GGNNCC	4 cut(s)	543, 687, 774, 873
NmeAIII	GCCGAG	2 cut(s)	205, 388
NmuCI	GTSAC	5 cut(s)	27, 281, 418, 597, 1410
NspV	TTCGAA	1 cut(s)	985
PaeR7I	CTCGAG	1 cut(s)	942
PciSI	GCTCTTC	1 cut(s)	585
PcsI	WCGNNNNNNNCGW	1 cut(s)	87
PfeI	GAWTC	1 cut(s)	388
PleI	GAGTC	4 cut(s)	40, 753, 786, 1148
PpsI	GAGTC	4 cut(s)	40, 753, 786, 1148
PpuMI	RGGWCCY	1 cut(s)	773
Psp124BI	GAGCTC	1 cut(s)	862
Psp5II	RGGWCCY	1 cut(s)	773
Psp6I	CCWGG	1 cut(s)	1285
PspEI	GGTNACC	1 cut(s)	27
PspFI	CCCAGC	1 cut(s)	665
PspGI	CCWGG	1 cut(s)	1285
PspN4I	GGNNCC	4 cut(s)	543, 687, 774, 873
PspPI	GGNCC	6 cut(s)	218, 686, 773, 1173, 1337, 1423
PspPPI	RGGWCCY	1 cut(s)	773
PspXI	VCTCGAGB	1 cut(s)	942
PstI	CTGCAG	2 cut(s)	1105, 1534
PstNI	CAGNNNCTG	2 cut(s)	49, 397
PsuI	RGATCY	1 cut(s)	559
RsaI	GTAC	2 cut(s)	908, 996
RsaNI	GTAC	2 cut(s)	907, 995
RseI	CAYNNNNRTG	1 cut(s)	1079
SacI	GAGCTC	1 cut(s)	862
SapI	GCTCTTC	1 cut(s)	585
SaqAI	TTAA	4 cut(s)	254, 411, 513, 1247
Sau96I	GGNCC	6 cut(s)	218, 686, 773, 1173, 1337, 1423
SchI	GAGTC	4 cut(s)	40, 754, 786, 1148
ScrFI	CCNGG	5 cut(s)	25, 626, 1108, 1123, 1287
SduI	GDGCHC	2 cut(s)	439, 862
SfaNI	GCATC	6 cut(s)	396, 453, 574, 947, 1101, 1520
SfcI	CTRYAG	2 cut(s)	1101, 1530
Sfr274I	CTCGAG	1 cut(s)	942
SfuI	TTCGAA	1 cut(s)	985
SinI	GGWCC	4 cut(s)	773, 1173, 1337, 1423
SlaI	CTCGAG	1 cut(s)	942
SmiMI	CAYNNNNRTG	1 cut(s)	1079
SmlI	CTYRAG	2 cut(s)	942, 1192
SmoI	CTYRAG	2 cut(s)	942, 1192
SpeI	ACTAGT	1 cut(s)	275
Sse9I	AATT	8 cut(s)	53, 233, 427, 713, 796, 1292, 1594, 1652
SsiI	CCGC	9 cut(s)	38, 107, 110, 383, 525, 1071, 1139, 1503, 1545
SspMI	CTAG	3 cut(s)	276, 1170, 1538
SstI	GAGCTC	1 cut(s)	862
StyD4I	CCNGG	5 cut(s)	23, 624, 1106, 1121, 1285
StyI	CCWWGG	2 cut(s)	963, 1074
TaaI	ACNGT	7 cut(s)	434, 633, 1234, 1254, 1272, 1427, 1486
TaiI	ACGT	1 cut(s)	243
TaqI	TCGA	5 cut(s)	210, 314, 862, 943, 985
TaqII	GACCGA	2 cut(s)	108, 1355
TasI	AATT	8 cut(s)	53, 233, 427, 713, 796, 1292, 1594, 1652
TatI	WGTACW	1 cut(s)	994
TauI	GCSGC	5 cut(s)	109, 112, 1073, 1505, 1547
TfiI	GAWTC	1 cut(s)	388
Tru1I	TTAA	4 cut(s)	254, 411, 513, 1247
Tru9I	TTAA	4 cut(s)	254, 411, 513, 1247
TscAI	CASTG	8 cut(s)	199, 253, 439, 889, 1237, 1504, 1534, 1633
TseFI	GTSAC	5 cut(s)	27, 281, 418, 597, 1410
Tsp45I	GTSAC	5 cut(s)	27, 281, 418, 597, 1410
TspDTI	ATGAA	3 cut(s)	392, 1053, 1086
TspRI	CASTG	8 cut(s)	199, 253, 439, 889, 1237, 1504, 1534, 1633
VpaK11BI	GGWCC	4 cut(s)	773, 1173, 1337, 1423
XapI	RAATTY	2 cut(s)	233, 713
XcmI	CCANNNNNNNNNTGG	3 cut(s)	199, 343, 1237
XhoI	CTCGAG	1 cut(s)	942
XmiI	GTMKAC	1 cut(s)	141
XspI	CTAG	3 cut(s)	276, 1170, 1538

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.