Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2C

Orthogroup ID

OG0002724

Physical Location & Seq

Genomic Coordinates Forward (+)

69615671 .. 69617407

Gene Structure 1737 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2CG521600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1287 bp

ATGAACGCGGAGAACCAGAGGCTGAGAGAGATGCTTAATCAGGTCACTACCAATTACAGTGCTCTACAAGTGCATTTGCTGAGTTTGATGCAAAACCAGAAGGCTGAGAACAGCGTGGAAGTGGAAGAGAAGAAGCTTAATAATGGCAGTGGATCGCAGATGGTGGTTCCGAGGCAGTTTATGGATCTTGGTTTGGCTGCAAATGGGGATGCCGAAGAGCCATCACATTCTTCTTCGGATGAGAGAAGCCGGGAACGGTCTGGATCAGGTGATAATGGAAAGGTTGGTGCTGGGAATGTTGGTGATGAGGGGCCTGCGTTTGATCAGGAGAAGAAGGAATTTGGTCGGGGGATTAGTGGGAGAGAGGAGAGTCCTGATCAACAAACGCAGAGTTGGGGACCTAACAAAGTTCCGAGACTCAATTCTCCAAAGGAGGTTGATCAAACTGAGGCTACAATGAGGAAGGCTCGGGTTTCTGTTAGAGCTCGATCAGAGGCACCCATGATCACTGATGGATGTCAATGGCGTAAGTACGGGCAAAAGATGGCGAAAGGAAACCCATGTCCTCGAGCTTATTATAGATGCACCATGGCTGCTGGTTGCCCAGTTCGAAAACAAGTACAAAGATGTGCTGAAGATAGGACAATCCTCATCACAACATATGAAGGCAATCACAACCACCCATTGCCACCAGCCGCCATGGCAATGGCGTCGACCACTTCATCTGCAGCCCGGATGCTGCTTTCCGGGTCTATGCCAAGCGCGGATGGCCTAATGGACTCAAACTTCCTCACTAGGACCATCCTCCCATGCTCCTCAAGCATGGCCACAATCTCAGCCTCAGCTCCATTCCCCACTGTTACATTGGACTTAACACAGTCCCCAAACCCTTTACAGTTCCAAAGGCCACCAGGCCAATTCAACATCCCATTCCCAAACCCGTCTCAGAACTTGACCAATGGACCTGTCTCATTGCTGCCCCAACTCTTCGGTCAGGCGCTCTACAACCAGTCTAAGTTTTCTGGCCTTCAAATGTCACAGGACATGGACCGTAATGCCCATCCTCAACAAGCTCAGCAGCAGAACTCATTGGCCGATACTGTTACTGCTGCCACTGCCGCTATCGCATCCGATCCAAACTTCACTGCAGCTCTAGCAGCCGCCATCACCTCCATCATTGGCAATGCTCATCCAAACAACAATGGTAACAATTCTACCACCAACAACAACACAAGCAACAGCAATGGCAATGGAAACAACAGCAGCAAATTGCAACAACAAGATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001067 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0006355 GO:0006950 GO:0007154 GO:0008150 GO:0009267 GO:0009605 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0009991 GO:0010033 GO:0010036 GO:0010200 GO:0010243 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0016036 GO:0019219 GO:0019222 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031667 GO:0031668 GO:0031669 GO:0033554 GO:0042221 GO:0042493 GO:0042594 GO:0044212 GO:0045892 GO:0045934 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0051716 GO:0060255 GO:0065007 GO:0070887 GO:0071496 GO:0080029 GO:0080090 GO:0080169 GO:0097159 GO:0140110 GO:1901363 GO:1901698 GO:1901700 GO:1902679 GO:1903506 GO:1903507 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

WRKY

Protein Analysis

428

Amino Acids

46.13

Weight (kDa)

7.01

Isoelectric Point (pI)

41.63

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WRKY	PF03106	171 - 228	7.4e-26	WRKY DNA -binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002724)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G01720
fragaria_vesca	FvH4_1g26200 FvH4_1g26200 FvH4_6g42870 FvH4_6g42870 FvH4_6g42870
malus_domestica	MD09G1111200.v1.1 MD17G1099000.v1.1
prunus_persica	Prupe.3G002300_v2.0.a1 Prupe.3G214800_v2.0.a1
pyrus_communis	pycom09g03370
rosa_chinensis	RchiOBHm_Chr2g0158801 RchiOBHm_Chr3g0485691 RchiOBHm_Chr3g0485711
rosa_laevigata	RLG00000021114 RLG00000023129 RLG00000023130
rosa_multiflora	Rmu_sc0003005.1_g000017 Rmu_sc0003005.1_g000026 Rmu_ssc0000129.1_g000002
rosa_roxburghii	Rroxscaffold_6G00396400 Rroxscaffold_6G00396500 Rroxscaffold_6G00396810 Rroxscaffold_6G00396830
rosa_rugosa	Rorug02G0472600 Rorug03G0220800
rosa_samantha	Rh2AG538400 Rh2BG551100 Rh2CG521600 Rh2DG560900 Rh3AG270000 Rh3AG270200 Rh3BG305800 Rh3CG303900 Rh3CG304200 Rh3DG300200
rosa_wichuraiana	Rw0G006930 Rw0G009910 Rw2G044560

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	496
AccI	GTMKAC	1 cut(s)	713
AccII	CGCG	2 cut(s)	8, 764
AciI	CCGC	5 cut(s)	8, 696, 764, 1119, 1161
AclWI	GGATC	4 cut(s)	160, 192, 271, 1127
AcoI	YGGCCR	2 cut(s)	825, 1092
AcsI	RAATTY	1 cut(s)	338
AcuI	CTGAAG	1 cut(s)	654
AcyI	GRCGYC	1 cut(s)	710
AfaI	GTAC	2 cut(s)	533, 621
AgsI	TTSAA	2 cut(s)	922, 1031
AjnI	CCWGG	1 cut(s)	910
AluBI	AGCT	6 cut(s)	136, 485, 572, 845, 1073, 1151
AluI	AGCT	6 cut(s)	136, 485, 572, 845, 1073, 1151
Alw21I	GWGCWC	2 cut(s)	64, 487
Alw26I	GTCTC	3 cut(s)	409, 948, 973
AlwI	GGATC	4 cut(s)	160, 192, 271, 1127
AlwNI	CAGNNNCTG	1 cut(s)	22
Ama87I	CYCGRG	2 cut(s)	468, 567
AoxI	GGCC	7 cut(s)	311, 769, 825, 905, 913, 1024, 1092
ApoI	RAATTY	1 cut(s)	338
AspLEI	GCGC	2 cut(s)	764, 1000
AspS9I	GGNCC	5 cut(s)	311, 398, 798, 962, 1048
AsuC2I	CCSGG	3 cut(s)	251, 733, 748
AsuHPI	GGTGA	3 cut(s)	281, 314, 1159
AsuII	TTCGAA	1 cut(s)	610
AvaI	CYCGRG	2 cut(s)	468, 567
AvaII	GGWCC	4 cut(s)	398, 798, 962, 1048
BalI	TGGCCA	1 cut(s)	827
BanI	GGYRCC	1 cut(s)	496
BanII	GRGCYC	1 cut(s)	487
Bbv12I	GWGCWC	2 cut(s)	64, 487
BbvCI	CCTCAGC	1 cut(s)	841
BccI	CCATC	9 cut(s)	154, 229, 506, 538, 761, 809, 1068, 1172, 1181
BcgI	CGANNNNNNTGC	2 cut(s)	693, 727
BciT130I	CCWGG	1 cut(s)	912
BclI	TGATCA	4 cut(s)	322, 376, 439, 504
BcnI	CCSGG	3 cut(s)	251, 733, 748
BcoDI	GTCTC	3 cut(s)	409, 948, 973
BfaI	CTAG	2 cut(s)	795, 1154
BfmI	CTRYAG	2 cut(s)	726, 1146
BfoI	RGCGCY	1 cut(s)	1001
BglI	GCCNNNNNGGC	1 cut(s)	701
BlpI	GCTNAGC	1 cut(s)	1074
Bme1390I	CCNGG	4 cut(s)	251, 733, 748, 912
Bme18I	GGWCC	4 cut(s)	398, 798, 962, 1048
BmeT110I	CYCGRG	2 cut(s)	468, 567
BmgT120I	GGNCC	5 cut(s)	311, 398, 798, 962, 1048
BmiI	GGNNCC	4 cut(s)	168, 312, 399, 498
BmrFI	CCNGG	4 cut(s)	251, 733, 748, 912
BmrI	ACTGGG	1 cut(s)	599
BmsI	GCATC	6 cut(s)	21, 78, 199, 572, 726, 1136
BmuI	ACTGGG	1 cut(s)	599
BplI	GAGNNNNNCTC	2 cut(s)	451, 483
Bpu10I	CCTNAGC	1 cut(s)	841
Bpu1102I	GCTNAGC	1 cut(s)	1074
Bpu14I	TTCGAA	1 cut(s)	610
BpuEI	CTTGAG	1 cut(s)	802
BpuMI	CCSGG	3 cut(s)	251, 733, 748
BsaHI	GRCGYC	1 cut(s)	710
BsaJI	CCNNGG	3 cut(s)	170, 588, 699
Bse1I	ACTGG	2 cut(s)	605, 1009
Bse3DI	GCAATG	6 cut(s)	683, 711, 971, 1189, 1249, 1255
BseBI	CCWGG	1 cut(s)	912
BseDI	CCNNGG	3 cut(s)	170, 588, 699
BseMI	GCAATG	6 cut(s)	683, 711, 971, 1189, 1249, 1255
BseMII	CTCAG	8 cut(s)	14, 71, 96, 438, 849, 855, 959, 1088
BseNI	ACTGG	2 cut(s)	605, 1009
BseRI	GAGGAG	2 cut(s)	380, 805
BseYI	CCCAGC	1 cut(s)	290
Bsh1236I	CGCG	2 cut(s)	8, 764
BshFI	GGCC	7 cut(s)	313, 771, 827, 907, 915, 1026, 1094
BshNI	GGYRCC	1 cut(s)	496
BsiHKAI	GWGCWC	2 cut(s)	64, 487
BsiHKCI	CYCGRG	2 cut(s)	468, 567
BsiSI	CCGG	3 cut(s)	250, 733, 747
BslFI	GGGAC	2 cut(s)	411, 865
BsmAI	GTCTC	3 cut(s)	409, 948, 973
BsmBI	CGTCTC	1 cut(s)	948
BsmFI	GGGAC	2 cut(s)	411, 865
BsnI	GGCC	7 cut(s)	313, 771, 827, 907, 915, 1026, 1094
BsoBI	CYCGRG	2 cut(s)	468, 567
Bsp119I	TTCGAA	1 cut(s)	610
Bsp1286I	GDGCHC	2 cut(s)	64, 487
Bsp143I	GATC	9 cut(s)	152, 184, 263, 322, 376, 439, 488, 504, 1132
Bsp1720I	GCTNAGC	1 cut(s)	1074
Bsp19I	CCATGG	2 cut(s)	588, 699
BspACI	CCGC	5 cut(s)	8, 696, 764, 1119, 1161
BspANI	GGCC	7 cut(s)	313, 771, 827, 907, 915, 1026, 1094
BspCNI	CTCAG	8 cut(s)	15, 72, 97, 439, 848, 854, 958, 1087
BspFNI	CGCG	2 cut(s)	8, 764
BspLI	GGNNCC	4 cut(s)	168, 312, 399, 498
BspMAI	CTGCAG	2 cut(s)	730, 1150
BspPI	GGATC	4 cut(s)	160, 192, 271, 1127
BspQI	GCTCTTC	1 cut(s)	210
BspT104I	TTCGAA	1 cut(s)	610
BspT107I	GGYRCC	1 cut(s)	496
BsrDI	GCAATG	6 cut(s)	683, 711, 971, 1189, 1249, 1255
BsrI	ACTGG	2 cut(s)	605, 1009
BssECI	CCNNGG	3 cut(s)	170, 588, 699
BssMI	GATC	9 cut(s)	152, 184, 263, 322, 376, 439, 488, 504, 1132
BssNI	GRCGYC	1 cut(s)	710
BssT1I	CCWWGG	2 cut(s)	588, 699
Bst2UI	CCWGG	1 cut(s)	912
Bst4CI	ACNGT	7 cut(s)	59, 258, 859, 879, 897, 1052, 1102
Bst6I	CTCTTC	3 cut(s)	120, 210, 992
BstACI	GRCGYC	1 cut(s)	710
BstBI	TTCGAA	1 cut(s)	610
BstC8I	GCNNGC	1 cut(s)	315
BstDEI	CTNAG	9 cut(s)	23, 80, 105, 447, 835, 841, 945, 1014, 1074
BstDSI	CCRYGG	2 cut(s)	588, 699
BstFNI	CGCG	2 cut(s)	8, 764
BstH2I	RGCGCY	1 cut(s)	1001
BstHHI	GCGC	2 cut(s)	764, 1000
BstKTI	GATC	9 cut(s)	155, 187, 266, 325, 379, 442, 491, 507, 1135
BstMAI	GTCTC	3 cut(s)	409, 948, 973
BstMBI	GATC	9 cut(s)	152, 184, 263, 322, 376, 439, 488, 504, 1132
BstMWI	GCNNNNNNNGC	8 cut(s)	701, 768, 819, 1115, 1118, 1124, 1154, 1157
BstNI	CCWGG	1 cut(s)	912
BstSCI	CCNGG	4 cut(s)	249, 731, 746, 910
BstSFI	CTRYAG	2 cut(s)	726, 1146
BstUI	CGCG	2 cut(s)	8, 764
BstX2I	RGATCY	1 cut(s)	184
BstXI	CCANNNNNNTGG	1 cut(s)	706
BstYI	RGATCY	1 cut(s)	184
BsuRI	GGCC	7 cut(s)	313, 771, 827, 907, 915, 1026, 1094
BtgI	CCRYGG	2 cut(s)	588, 699
BtsI	GCAGTG	3 cut(s)	154, 1113, 1143
BtsIMutI	CAGTG	6 cut(s)	64, 154, 507, 855, 1113, 1143
Cac8I	GCNNGC	1 cut(s)	315
CaiI	CAGNNNCTG	1 cut(s)	22
CfoI	GCGC	2 cut(s)	764, 1000
Cfr13I	GGNCC	5 cut(s)	311, 398, 798, 962, 1048
CseI	GACGC	1 cut(s)	699
Csp6I	GTAC	2 cut(s)	532, 620
CviAII	CATG	7 cut(s)	502, 561, 589, 700, 810, 823, 1045
CviQI	GTAC	2 cut(s)	532, 620
DdeI	CTNAG	9 cut(s)	23, 80, 105, 447, 835, 841, 945, 1014, 1074
DpnI	GATC	9 cut(s)	154, 186, 265, 324, 378, 441, 490, 506, 1134
DpnII	GATC	9 cut(s)	152, 184, 263, 322, 376, 439, 488, 504, 1132
EaeI	YGGCCR	2 cut(s)	825, 1092
Eam1104I	CTCTTC	3 cut(s)	120, 210, 992
EarI	CTCTTC	3 cut(s)	120, 210, 992
Ecl136II	GAGCTC	1 cut(s)	485
Eco130I	CCWWGG	2 cut(s)	588, 699
Eco24I	GRGCYC	1 cut(s)	487
Eco47I	GGWCC	4 cut(s)	398, 798, 962, 1048
Eco53kI	GAGCTC	1 cut(s)	485
Eco57I	CTGAAG	1 cut(s)	654
Eco88I	CYCGRG	2 cut(s)	468, 567
EcoICRI	GAGCTC	1 cut(s)	485
EcoO109I	RGGNCCY	2 cut(s)	311, 398
EcoRII	CCWGG	1 cut(s)	910
EcoT14I	CCWWGG	2 cut(s)	588, 699
EcoT38I	GRGCYC	1 cut(s)	487
ErhI	CCWWGG	2 cut(s)	588, 699
Esp3I	CGTCTC	1 cut(s)	948
FaeI	CATG	7 cut(s)	505, 564, 592, 703, 813, 826, 1048
FaqI	GGGAC	2 cut(s)	411, 865
FatI	CATG	7 cut(s)	501, 560, 588, 699, 809, 822, 1044
FauNDI	CATATG	1 cut(s)	661
FbaI	TGATCA	4 cut(s)	322, 376, 439, 504
FblI	GTMKAC	1 cut(s)	713
FriOI	GRGCYC	1 cut(s)	487
FspBI	CTAG	2 cut(s)	795, 1154
GlaI	GCGC	2 cut(s)	763, 999
GsaI	CCCAGC	1 cut(s)	294
HaeII	RGCGCY	1 cut(s)	1001
HaeIII	GGCC	7 cut(s)	313, 771, 827, 907, 915, 1026, 1094
HapII	CCGG	3 cut(s)	250, 733, 747
HgaI	GACGC	1 cut(s)	699
HhaI	GCGC	2 cut(s)	764, 1000
Hin1I	GRCGYC	1 cut(s)	710
Hin1II	CATG	7 cut(s)	505, 564, 592, 703, 813, 826, 1048
Hin6I	GCGC	2 cut(s)	762, 998
HinP1I	GCGC	2 cut(s)	762, 998
HincII	GTYRAC	1 cut(s)	714
HindII	GTYRAC	1 cut(s)	714
HindIII	AAGCTT	1 cut(s)	134
HinfI	GANTC	3 cut(s)	370, 417, 779
HpaII	CCGG	3 cut(s)	250, 733, 747
HphI	GGTGA	3 cut(s)	281, 314, 1159
Hpy166II	GTNNAC	1 cut(s)	714
Hpy188I	TCNGA	6 cut(s)	171, 238, 414, 493, 948, 1132
Hpy188III	TCNNGA	3 cut(s)	261, 326, 374
Hpy8I	GTNNAC	1 cut(s)	714
Hpy99I	CGWCG	1 cut(s)	715
HpyAV	CCTTC	5 cut(s)	94, 328, 457, 659, 1037
HpyCH4III	ACNGT	7 cut(s)	59, 258, 859, 879, 897, 1052, 1102
HpyCH4V	TGCA	7 cut(s)	73, 91, 200, 585, 728, 1148, 1273
HpyF10VI	GCNNNNNNNGC	8 cut(s)	701, 768, 819, 1115, 1118, 1124, 1154, 1157
HpyF3I	CTNAG	9 cut(s)	23, 80, 105, 447, 835, 841, 945, 1014, 1074
Hsp92I	GRCGYC	1 cut(s)	710
Hsp92II	CATG	7 cut(s)	505, 564, 592, 703, 813, 826, 1048
HspAI	GCGC	2 cut(s)	762, 998
Ksp22I	TGATCA	4 cut(s)	322, 376, 439, 504
Kzo9I	GATC	9 cut(s)	152, 184, 263, 322, 376, 439, 488, 504, 1132
LguI	GCTCTTC	1 cut(s)	210
LmnI	GCTCC	2 cut(s)	818, 850
LweI	GCATC	6 cut(s)	21, 78, 199, 572, 726, 1136
MaeI	CTAG	2 cut(s)	795, 1154
MaeIII	GTNAC	5 cut(s)	43, 859, 1035, 1102, 1205
MalI	GATC	9 cut(s)	154, 186, 265, 324, 378, 441, 490, 506, 1134
MboI	GATC	9 cut(s)	152, 184, 263, 322, 376, 439, 488, 504, 1132
MboII	GAAGA	8 cut(s)	137, 142, 222, 225, 227, 343, 647, 979
MflI	RGATCY	1 cut(s)	184
MhlI	GDGCHC	2 cut(s)	64, 487
MlsI	TGGCCA	1 cut(s)	827
MluCI	AATT	6 cut(s)	52, 338, 421, 917, 1210, 1268
MluNI	TGGCCA	1 cut(s)	827
MlyI	GAGTC	3 cut(s)	379, 411, 773
Mox20I	TGGCCA	1 cut(s)	827
MscI	TGGCCA	1 cut(s)	827
MseI	TTAA	3 cut(s)	36, 138, 872
MslI	CAYNNNNRTG	1 cut(s)	704
Msp20I	TGGCCA	1 cut(s)	827
MspI	CCGG	3 cut(s)	250, 733, 747
MspR9I	CCNGG	4 cut(s)	251, 733, 748, 912
MvaI	CCWGG	1 cut(s)	912
MvnI	CGCG	2 cut(s)	8, 764
MwoI	GCNNNNNNNGC	8 cut(s)	701, 768, 819, 1115, 1118, 1124, 1154, 1157
NciI	CCSGG	3 cut(s)	251, 733, 748
NcoI	CCATGG	2 cut(s)	588, 699
NdeI	CATATG	1 cut(s)	661
NdeII	GATC	9 cut(s)	152, 184, 263, 322, 376, 439, 488, 504, 1132
NlaIII	CATG	7 cut(s)	505, 564, 592, 703, 813, 826, 1048
NlaIV	GGNNCC	4 cut(s)	168, 312, 399, 498
NmuCI	GTSAC	2 cut(s)	43, 1035
NspV	TTCGAA	1 cut(s)	610
PaeR7I	CTCGAG	1 cut(s)	567
PciSI	GCTCTTC	1 cut(s)	210
PleI	GAGTC	3 cut(s)	378, 411, 773
PpsI	GAGTC	3 cut(s)	378, 411, 773
PpuMI	RGGWCCY	1 cut(s)	398
Psp124BI	GAGCTC	1 cut(s)	487
Psp5II	RGGWCCY	1 cut(s)	398
Psp6I	CCWGG	1 cut(s)	910
PspFI	CCCAGC	1 cut(s)	290
PspGI	CCWGG	1 cut(s)	910
PspN4I	GGNNCC	4 cut(s)	168, 312, 399, 498
PspPI	GGNCC	5 cut(s)	311, 398, 798, 962, 1048
PspPPI	RGGWCCY	1 cut(s)	398
PspXI	VCTCGAGB	1 cut(s)	567
PstI	CTGCAG	2 cut(s)	730, 1150
PstNI	CAGNNNCTG	1 cut(s)	22
PsuI	RGATCY	1 cut(s)	184
RsaI	GTAC	2 cut(s)	533, 621
RsaNI	GTAC	2 cut(s)	532, 620
RseI	CAYNNNNRTG	1 cut(s)	704
SacI	GAGCTC	1 cut(s)	487
SalI	GTCGAC	1 cut(s)	712
SapI	GCTCTTC	1 cut(s)	210
SaqAI	TTAA	3 cut(s)	36, 138, 872
Sau3AI	GATC	9 cut(s)	152, 184, 263, 322, 376, 439, 488, 504, 1132
Sau96I	GGNCC	5 cut(s)	311, 398, 798, 962, 1048
SchI	GAGTC	3 cut(s)	379, 411, 773
ScrFI	CCNGG	4 cut(s)	251, 733, 748, 912
SduI	GDGCHC	2 cut(s)	64, 487
SfaNI	GCATC	6 cut(s)	21, 78, 199, 572, 726, 1136
SfcI	CTRYAG	2 cut(s)	726, 1146
Sfr274I	CTCGAG	1 cut(s)	567
SfuI	TTCGAA	1 cut(s)	610
SinI	GGWCC	4 cut(s)	398, 798, 962, 1048
SlaI	CTCGAG	1 cut(s)	567
SmiMI	CAYNNNNRTG	1 cut(s)	704
SmlI	CTYRAG	2 cut(s)	567, 817
SmoI	CTYRAG	2 cut(s)	567, 817
Sse9I	AATT	6 cut(s)	52, 338, 421, 917, 1210, 1268
SsiI	CCGC	5 cut(s)	8, 696, 764, 1119, 1161
SspMI	CTAG	2 cut(s)	795, 1154
SstI	GAGCTC	1 cut(s)	487
StyD4I	CCNGG	4 cut(s)	249, 731, 746, 910
StyI	CCWWGG	2 cut(s)	588, 699
TaaI	ACNGT	7 cut(s)	59, 258, 859, 879, 897, 1052, 1102
TaqI	TCGA	4 cut(s)	487, 568, 610, 713
TaqII	GACCGA	1 cut(s)	980
TasI	AATT	6 cut(s)	52, 338, 421, 917, 1210, 1268
TatI	WGTACW	1 cut(s)	619
TauI	GCSGC	3 cut(s)	698, 1121, 1163
Tru1I	TTAA	3 cut(s)	36, 138, 872
Tru9I	TTAA	3 cut(s)	36, 138, 872
TscAI	CASTG	6 cut(s)	64, 154, 514, 862, 1120, 1150
TseFI	GTSAC	2 cut(s)	43, 1035
Tsp45I	GTSAC	2 cut(s)	43, 1035
TspDTI	ATGAA	3 cut(s)	17, 678, 711
TspRI	CASTG	6 cut(s)	64, 154, 514, 862, 1120, 1150
VpaK11BI	GGWCC	4 cut(s)	398, 798, 962, 1048
XapI	RAATTY	1 cut(s)	338
XcmI	CCANNNNNNNNNTGG	1 cut(s)	862
XhoI	CTCGAG	1 cut(s)	567
XmiI	GTMKAC	1 cut(s)	713
XspI	CTAG	2 cut(s)	795, 1154

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.