Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0006741

Physical Location & Seq

Genomic Coordinates Reverse (-)

14306293 .. 14308367

Gene Structure 2075 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G33820.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 936 bp

ATGGGAGAGAGTAAGACGACGACAGGAGAGGGCTTCGGGTTTTACAAGGAATATGTCGCCGGAATGATGGCTGGTCTCGCCACTGTCGCCGTCGGCCACCCTTTCGACACCGTCAAGGTGAAACTTCAGAAACATAATACAGATGTGCAAGGGCTCAGATACAAAAATGGGCTGCATTGTGCTTCGAGGATCTTGCAAACTGAAGGAGTCAAAGGACTTTATAGGGGAGCAACATCGTCGTTTATGGGAATGGCTTTTGAAAGTTCATTGATGTTTGGCATATACTCCCAGGCTAAGCTGTTCTTGCGGGGAACTTTGCCAGATGATGGGCCACGACCAGAGATAATTGTTCCGTCTGCTATGTTTGGTGGAGCTATCATTAGTTTTGTGTTATGTCCAACAGAGCTAGTAAAGTGTAGAATGCAGATCCAAGGAACGGATTCTCTGGTTCCTAACTTCCGTAGATACAACAGTCCTCTTGATTGTGCCGTTCAGACCGTTAAAAATGATGGGGTAACAGGTATCTTTCGTGGTGGTTCGGCAACCTTATTAAGAGAATGTACGGGAAATGCTGTCTTTTTTACTGTCTATGAGTACTTACGGTATCATATCCACTCGAGATTGGAGGATTCTAAGCTGAAAGATGGTTACTTGGTTGACATGGGGATAGGAGTTCTCACTGGTGGTCTTGGAGGCATAGCTTGCTGGTCAGCTGTTTTGCCTTTTGATGTAGCAAAAACCATAATCCAGACCTCTTCAGAGAAAGCTACAGAGAGAAATCCTTTTAAAGTGTTGAGCTCGATTCACAAGAGGGCAGGACTCAAGGGATGCTATGCAGGTTTGGGTCCAACCATTGTGAGAGCATTCCCTGCTAATGCAGCAGCAATTGTTGCTTGGGAGTTCTCAATGAAAATGTTGGGAATCAAACGTGACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003333 GO:0003674 GO:0005215 GO:0005290 GO:0005342 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005743 GO:0006810 GO:0006811 GO:0006812 GO:0006820 GO:0006839 GO:0006855 GO:0006865 GO:0008150 GO:0008324 GO:0008509 GO:0008514 GO:0015075 GO:0015171 GO:0015174 GO:0015179 GO:0015181 GO:0015189 GO:0015238 GO:0015318 GO:0015711 GO:0015802 GO:0015807 GO:0015809 GO:0015849 GO:0015893 GO:0016020 GO:0016021 GO:0019866 GO:0022857 GO:0031090 GO:0031224 GO:0031966 GO:0031967 GO:0031975 GO:0034220 GO:0042221 GO:0042493 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0045117 GO:0046942 GO:0046943 GO:0050896 GO:0051179 GO:0051234 GO:0055085 GO:0071702 GO:0071705 GO:0089709 GO:0098655 GO:0098656 GO:1901474 GO:1902022 GO:1902475 GO:1903401 GO:1903825 GO:1903826 GO:1905039 GO:1990822

KEGG Pathways

Metabolic & Signaling

ko04714 map04714

Pfam Domains

Protein Families

Mito_carr

Protein Analysis

311

Amino Acids

33.73

Weight (kDa)

9.25

Isoelectric Point (pI)

38.81

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Mito_carr	PF00153	13 - 103	3.2e-22	Mitochondrial carrier protein
Mito_carr	PF00153	119 - 204	8.7e-19	Mitochondrial carrier protein
Mito_carr	PF00153	225 - 307	7e-17	Mitochondrial carrier protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006741)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G33820 AT2G33820 AT2G33820 AT2G33820
fragaria_vesca	FvH4_3g08870 FvH4_3g08870 FvH4_3g08870
malus_domestica	MD05G1312200.v1.1 MD10G1291700.v1.1
prunus_persica	Prupe.4G050500_v2.0.a1 Prupe.4G050500_v2.0.a1
pyrus_communis	pycom05g28810 pycom10g24390
rosa_chinensis	RchiOBHm_Chr5g0008881
rosa_laevigata	RLG00000031613
rosa_multiflora	Rmu_sc0004677.1_g000009 Rmu_sc0037535.1_g000001
rosa_roxburghii	Rroxscaffold_1G00067120 Rroxscaffold_1G00067740
rosa_rugosa	Rorug04G0440000 Rorug04G0440000
rosa_samantha	Rh5AG068400 Rh5BG065300 Rh5CG076500 Rh5DG064200
rosa_wichuraiana	Rw5G006420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	827
AccB7I	CCANNNNNTGG	1 cut(s)	326
AciI	CCGC	1 cut(s)	307
AclWI	GGATC	2 cut(s)	197, 421
AcoI	YGGCCR	1 cut(s)	94
AcuI	CTGAAG	3 cut(s)	110, 222, 741
AfaI	GTAC	2 cut(s)	562, 596
AfiI	CCNNNNNNNGG	2 cut(s)	326, 436
AgsI	TTSAA	1 cut(s)	260
AjnI	CCWGG	1 cut(s)	288
AluBI	AGCT	8 cut(s)	298, 374, 406, 637, 701, 713, 767, 798
AluI	AGCT	8 cut(s)	298, 374, 406, 637, 701, 713, 767, 798
Alw21I	GWGCWC	1 cut(s)	800
Alw26I	GTCTC	1 cut(s)	80
AlwI	GGATC	2 cut(s)	197, 421
Ama87I	CYCGRG	1 cut(s)	616
AoxI	GGCC	2 cut(s)	94, 329
ApeKI	GCWGC	3 cut(s)	172, 878, 881
Asp700I	GAANNNNTTC	1 cut(s)	439
AspS9I	GGNCC	2 cut(s)	329, 845
AsuHPI	GGTGA	1 cut(s)	130
AvaI	CYCGRG	1 cut(s)	616
AvaII	GGWCC	1 cut(s)	845
BaeI	ACNNNNGTAYC	2 cut(s)	457, 490
BanII	GRGCYC	2 cut(s)	156, 800
Bbv12I	GWGCWC	1 cut(s)	800
BbvI	GCAGC	3 cut(s)	159, 890, 893
BccI	CCATC	4 cut(s)	61, 320, 503, 638
BceAI	ACGGC	2 cut(s)	74, 473
BcgI	CGANNNNNNTGC	4 cut(s)	175, 209, 219, 253
BciT130I	CCWGG	1 cut(s)	290
BcoDI	GTCTC	1 cut(s)	80
BfaI	CTAG	2 cut(s)	407, 934
BfmI	CTRYAG	1 cut(s)	768
BfuAI	ACCTGC	1 cut(s)	827
BisI	GCNGC	3 cut(s)	173, 879, 882
BlpI	GCTNAGC	1 cut(s)	294
BlsI	GCNGC	3 cut(s)	174, 880, 883
BmcAI	AGTACT	1 cut(s)	596
Bme1390I	CCNGG	1 cut(s)	290
Bme18I	GGWCC	1 cut(s)	845
BmeT110I	CYCGRG	1 cut(s)	616
BmgT120I	GGNCC	2 cut(s)	329, 845
BmiI	GGNNCC	2 cut(s)	450, 846
BmrFI	CCNGG	1 cut(s)	290
BmsI	GCATC	1 cut(s)	818
Bpu1102I	GCTNAGC	1 cut(s)	294
BpuEI	CTTGAG	1 cut(s)	806
BsaI	GGTCTC	1 cut(s)	80
BsaJI	CCNNGG	2 cut(s)	288, 430
Bsc4I	CCNNNNNNNGG	2 cut(s)	326, 436
Bse1I	ACTGG	1 cut(s)	685
BseBI	CCWGG	1 cut(s)	290
BseDI	CCNNGG	2 cut(s)	288, 430
BseGI	GGATG	1 cut(s)	833
BseLI	CCNNNNNNNGG	2 cut(s)	326, 436
BseMII	CTCAG	1 cut(s)	169
BseNI	ACTGG	1 cut(s)	685
BseXI	GCAGC	3 cut(s)	159, 890, 893
BshFI	GGCC	2 cut(s)	96, 331
BsiHKAI	GWGCWC	1 cut(s)	800
BsiHKCI	CYCGRG	1 cut(s)	616
BsiSI	CCGG	1 cut(s)	60
BslI	CCNNNNNNNGG	2 cut(s)	326, 436
BsmAI	GTCTC	1 cut(s)	80
BsmI	GAATGC	2 cut(s)	426, 863
BsnI	GGCC	2 cut(s)	96, 331
Bso31I	GGTCTC	1 cut(s)	80
BsoBI	CYCGRG	1 cut(s)	616
Bsp1286I	GDGCHC	2 cut(s)	156, 800
Bsp143I	GATC	2 cut(s)	189, 426
Bsp1720I	GCTNAGC	1 cut(s)	294
BspACI	CCGC	1 cut(s)	307
BspANI	GGCC	2 cut(s)	96, 331
BspCNI	CTCAG	1 cut(s)	168
BspLI	GGNNCC	2 cut(s)	450, 846
BspMI	ACCTGC	1 cut(s)	827
BspPI	GGATC	2 cut(s)	197, 421
BspTNI	GGTCTC	1 cut(s)	80
BsrI	ACTGG	1 cut(s)	685
BssECI	CCNNGG	2 cut(s)	288, 430
BssMI	GATC	2 cut(s)	189, 426
BssT1I	CCWWGG	1 cut(s)	430
Bst2UI	CCWGG	1 cut(s)	290
Bst4CI	ACNGT	6 cut(s)	85, 112, 473, 499, 586, 603
Bst6I	CTCTTC	1 cut(s)	760
BstAPI	GCANNNNNTGC	3 cut(s)	702, 869, 890
BstC8I	GCNNGC	1 cut(s)	703
BstDEI	CTNAG	3 cut(s)	155, 294, 633
BstF5I	GGATG	1 cut(s)	833
BstKTI	GATC	2 cut(s)	192, 429
BstMAI	GTCTC	1 cut(s)	80
BstMBI	GATC	2 cut(s)	189, 426
BstMWI	GCNNNNNNNGC	7 cut(s)	77, 86, 304, 702, 869, 878, 890
BstNI	CCWGG	1 cut(s)	290
BstSCI	CCNGG	1 cut(s)	288
BstSFI	CTRYAG	1 cut(s)	768
BstV1I	GCAGC	3 cut(s)	159, 890, 893
BstX2I	RGATCY	2 cut(s)	189, 426
BstYI	RGATCY	2 cut(s)	189, 426
BsuRI	GGCC	2 cut(s)	96, 331
BtsCI	GGATG	1 cut(s)	833
BtsIMutI	CAGTG	2 cut(s)	81, 678
BveI	ACCTGC	1 cut(s)	827
Cac8I	GCNNGC	1 cut(s)	703
Cfr13I	GGNCC	2 cut(s)	329, 845
Csp6I	GTAC	2 cut(s)	561, 595
CviAII	CATG	1 cut(s)	661
CviQI	GTAC	2 cut(s)	561, 595
DdeI	CTNAG	3 cut(s)	155, 294, 633
DpnI	GATC	2 cut(s)	191, 428
DpnII	GATC	2 cut(s)	189, 426
DraI	TTTAAA	1 cut(s)	787
EaeI	YGGCCR	1 cut(s)	94
Eam1104I	CTCTTC	1 cut(s)	760
EarI	CTCTTC	1 cut(s)	760
Ecl136II	GAGCTC	1 cut(s)	798
Eco130I	CCWWGG	1 cut(s)	430
Eco24I	GRGCYC	2 cut(s)	156, 800
Eco31I	GGTCTC	1 cut(s)	80
Eco47I	GGWCC	1 cut(s)	845
Eco53kI	GAGCTC	1 cut(s)	798
Eco57I	CTGAAG	3 cut(s)	110, 222, 741
Eco88I	CYCGRG	1 cut(s)	616
EcoICRI	GAGCTC	1 cut(s)	798
EcoRII	CCWGG	1 cut(s)	288
EcoT14I	CCWWGG	1 cut(s)	430
EcoT38I	GRGCYC	2 cut(s)	156, 800
ErhI	CCWWGG	1 cut(s)	430
FaeI	CATG	1 cut(s)	664
FalI	AAGNNNNNCTT	2 cut(s)	287, 319
FatI	CATG	1 cut(s)	660
FauI	CCCGC	1 cut(s)	300
Fnu4HI	GCNGC	3 cut(s)	173, 879, 882
FokI	GGATG	1 cut(s)	840
FriOI	GRGCYC	2 cut(s)	156, 800
Fsp4HI	GCNGC	3 cut(s)	173, 879, 882
FspBI	CTAG	2 cut(s)	407, 934
GluI	GCNGC	3 cut(s)	173, 879, 882
HaeIII	GGCC	2 cut(s)	96, 331
HapII	CCGG	1 cut(s)	60
Hin1II	CATG	1 cut(s)	664
HincII	GTYRAC	1 cut(s)	658
HindII	GTYRAC	1 cut(s)	658
HinfI	GANTC	6 cut(s)	207, 440, 629, 802, 819, 921
HpaII	CCGG	1 cut(s)	60
HphI	GGTGA	1 cut(s)	130
Hpy166II	GTNNAC	1 cut(s)	658
Hpy188I	TCNGA	4 cut(s)	129, 158, 495, 760
Hpy188III	TCNNGA	3 cut(s)	479, 618, 748
Hpy8I	GTNNAC	1 cut(s)	658
Hpy99I	CGWCG	3 cut(s)	22, 95, 241
HpyAV	CCTTC	1 cut(s)	197
HpyCH4III	ACNGT	6 cut(s)	85, 112, 473, 499, 586, 603
HpyCH4IV	ACGT	1 cut(s)	928
HpyCH4V	TGCA	6 cut(s)	148, 175, 196, 424, 836, 878
HpyF10VI	GCNNNNNNNGC	7 cut(s)	77, 86, 304, 702, 869, 878, 890
HpyF3I	CTNAG	3 cut(s)	155, 294, 633
HpySE526I	ACGT	1 cut(s)	928
Hsp92II	CATG	1 cut(s)	664
Kzo9I	GATC	2 cut(s)	189, 426
LmnI	GCTCC	2 cut(s)	227, 371
Lsp1109I	GCAGC	3 cut(s)	159, 890, 893
LweI	GCATC	1 cut(s)	818
MaeI	CTAG	2 cut(s)	407, 934
MaeII	ACGT	1 cut(s)	928
MaeIII	GTNAC	3 cut(s)	514, 647, 929
MalI	GATC	2 cut(s)	191, 428
MboI	GATC	2 cut(s)	189, 426
MboII	GAAGA	1 cut(s)	747
MfeI	CAATTG	1 cut(s)	885
MflI	RGATCY	2 cut(s)	189, 426
MhlI	GDGCHC	2 cut(s)	156, 800
MluCI	AATT	2 cut(s)	345, 885
MlyI	GAGTC	2 cut(s)	216, 813
MmeI	TCCRAC	2 cut(s)	422, 872
MnlI	CCTC	7 cut(s)	22, 180, 486, 619, 686, 763, 804
MroXI	GAANNNNTTC	1 cut(s)	439
MseI	TTAA	3 cut(s)	501, 551, 786
MspA1I	CMGCKG	1 cut(s)	713
MspI	CCGG	1 cut(s)	60
MspR9I	CCNGG	1 cut(s)	290
MunI	CAATTG	1 cut(s)	885
Mva1269I	GAATGC	2 cut(s)	426, 863
MvaI	CCWGG	1 cut(s)	290
MwoI	GCNNNNNNNGC	7 cut(s)	77, 86, 304, 702, 869, 878, 890
NdeII	GATC	2 cut(s)	189, 426
NlaIII	CATG	1 cut(s)	664
NlaIV	GGNNCC	2 cut(s)	450, 846
NmuCI	GTSAC	1 cut(s)	929
PaeR7I	CTCGAG	1 cut(s)	616
PctI	GAATGC	2 cut(s)	426, 863
PdmI	GAANNNNTTC	1 cut(s)	439
PfeI	GAWTC	4 cut(s)	440, 629, 802, 921
PflFI	GACNNNGTC	1 cut(s)	110
PflMI	CCANNNNNTGG	1 cut(s)	326
PkrI	GCNGC	3 cut(s)	174, 880, 883
PleI	GAGTC	2 cut(s)	215, 813
PpsI	GAGTC	2 cut(s)	215, 813
Psp124BI	GAGCTC	1 cut(s)	800
Psp6I	CCWGG	1 cut(s)	288
PspGI	CCWGG	1 cut(s)	288
PspN4I	GGNNCC	2 cut(s)	450, 846
PspPI	GGNCC	2 cut(s)	329, 845
PsuI	RGATCY	2 cut(s)	189, 426
PsyI	GACNNNGTC	1 cut(s)	110
PvuII	CAGCTG	1 cut(s)	713
RsaI	GTAC	2 cut(s)	562, 596
RsaNI	GTAC	2 cut(s)	561, 595
SacI	GAGCTC	1 cut(s)	800
SaqAI	TTAA	3 cut(s)	501, 551, 786
SatI	GCNGC	3 cut(s)	173, 879, 882
Sau3AI	GATC	2 cut(s)	189, 426
Sau96I	GGNCC	2 cut(s)	329, 845
ScaI	AGTACT	1 cut(s)	596
SchI	GAGTC	2 cut(s)	216, 813
ScrFI	CCNGG	1 cut(s)	290
SduI	GDGCHC	2 cut(s)	156, 800
SfaNI	GCATC	1 cut(s)	818
SfcI	CTRYAG	1 cut(s)	768
Sfr274I	CTCGAG	1 cut(s)	616
SinI	GGWCC	1 cut(s)	845
SlaI	CTCGAG	1 cut(s)	616
SmlI	CTYRAG	2 cut(s)	616, 821
SmoI	CTYRAG	2 cut(s)	616, 821
Sse9I	AATT	2 cut(s)	345, 885
SsiI	CCGC	1 cut(s)	307
SspMI	CTAG	2 cut(s)	407, 934
SstI	GAGCTC	1 cut(s)	800
StyD4I	CCNGG	1 cut(s)	288
StyI	CCWWGG	1 cut(s)	430
TaaI	ACNGT	6 cut(s)	85, 112, 473, 499, 586, 603
TaiI	ACGT	1 cut(s)	931
TaqI	TCGA	4 cut(s)	105, 185, 617, 800
TasI	AATT	2 cut(s)	345, 885
TatI	WGTACW	1 cut(s)	594
TfiI	GAWTC	4 cut(s)	440, 629, 802, 921
Tru1I	TTAA	3 cut(s)	501, 551, 786
Tru9I	TTAA	3 cut(s)	501, 551, 786
TscAI	CASTG	2 cut(s)	88, 685
TseFI	GTSAC	1 cut(s)	929
TseI	GCWGC	3 cut(s)	172, 878, 881
Tsp45I	GTSAC	1 cut(s)	929
TspDTI	ATGAA	2 cut(s)	255, 923
TspGWI	ACGGA	3 cut(s)	342, 449, 452
TspRI	CASTG	2 cut(s)	88, 685
Tth111I	GACNNNGTC	1 cut(s)	110
Van91I	CCANNNNNTGG	1 cut(s)	326
VpaK11BI	GGWCC	1 cut(s)	845
XhoI	CTCGAG	1 cut(s)	616
XmnI	GAANNNNTTC	1 cut(s)	439
XspI	CTAG	2 cut(s)	407, 934
ZrmI	AGTACT	1 cut(s)	596

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.