AT2G34880

lysine-specific demethylase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
OG0002633
Physical Location & Seq
Reverse (-)
14711880 .. 14716634
4755 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G34880.1

Sequence Viewer

Length: 2421 bp
ATGGAGCCTTTCAGTGCTGCTCAGAACAAAGAGGACAAGGACACTAGCGTAGAACCTCCTCGTAGGCGTTGTCATCGAAAGAACAAGGGCACTAATGTAGAACCTCCTAGTAGTCCGTATCATCCGAAGGTTCTTGCTAGATGGGATCCGGCTAATGAAAAGAGGCCAGACATTGGTGAAGCTCCAGTATTCCACCCTACATCAGAGGAGTTTGAAGATACGCTTGCTTACATAGAAAAAATACGTCCCTTAGCTGAATCATTTGGTATTTGTCGAATCGTGCCACCGTCGAATTGGTCTCCTCCTTGCCGGCTTAAAGGGGATAGTATATGGAAGAATAAAAATTTCCCAACCCGTGTTCAGTTTGTTGACCTGCTTCAGAACAGAGGACCCGTGAAGAAGAAGACACCTAAAGGAAGGAAACGGAAACGAGGAAAATACTCAAGAACCGTCGCCCCCAAGAAACGAAATGGCTCTGTTTCTAAATCAGTTTCTACCCCCAAGGCGACCGAAGAAGAGAATTTTGGTTTCGAATCTGGTCCAGAATTTACTCTTGAGAAGTTTGAGAAATACGCTCAAGATTTCAAAGACTCCTACTTTGAAAGAAAAGACAATGTTGGAGATCCATCTGTTGAGGAGATCGAAGGAGAGTACTGGAGAATCATTGAGAAAGAAACAAATGAAGTTAAGGTATTGTATGGGACGGATTTGGAGAATCCCATACTTGGAAGCGGTTTCTCCAAAGGGGTAAAAATTCCAACCAGAAGAAATGATATGGATAAATACATATCTTCTGGTTGGAATTTGAACAACCTCGCCCGTCTGCAGGGATCTCTACTATCCTTTGAGGATTGTGAGATCTCAGGGGTTCAGGTGCCATGGCTCTATGTGGGCATGTGCTTTTCAACGTTTTGTTGGCATGTTGAGGACAATCATCTATATTCACTGAACTATCATCACTTTGGCGAGCCAAAAGTATGGTACGGAGTTCCGGGAAGCCATGCAACTGGGCTAGAGAAGGCAATGAGAAAACATCTACCAGATTTGTTCGATGAACAACCTGATCTACTTCATGAACTGGTTACTCAGTTTTCTCCAACGATTTTGAAAAATGAGGGAGTCCCGGTTTATCGAGCTGTTCAGAATGCAGGGGAGTATGTTCTAACATTCCCTAGAGCATATCATTCGGGTTTCAACTGCGGATTCAACTGTGCAGAAGCGGTGAATGTGGCTCCGGTTGATTGGCTGGCTCATGGACAGAATGCTGTGGAAATATATAGCCAAGAGACTCGGAAAACGTCTCTATCTCATGACAAAATTCTCCTTGGAGCAGCTTTTGAAGCTGTTAAGTCCCTCTCAGCACATGGGGAAGATAATACAAAAAGGTTCAGCTGGAAGAGATTCTGTGGGAAGGACGGTATCATAACTAAGGCCATCGAGGCACGGTTACGGATGGAAGAAAAAAGAATTGAGGCTCTTGGAAATGGTTTCAGCTTGGTAAAGATGGATAAAGACTTTGATTCAAACTGTGAAAGGGAATGCATCTCTTGCTTTAGTGACTTGCATCTCTCTGCTACTGGCTGCAAGAATTGCTCATCTCTCGAAGAATATGGTTGCACGAAACACGATATTTGTTCATGTGAAGGGAAAGACCGTTTCATTTTTCTTCGTTACACCATAGATGAGTTAAGCTCATTGGTAAGAGCATTGGAAGGTGAATCAGATGATCTAAAAGCTTGGCTTTCCAAAGTCATGGAAGGTTGTTCAGAGACTCAGAAGGGAGAATCTAGTGGGATTATCGTTAAGGAAAAGCAGGTACAAGAAGAATGTTTTGATCTGAATGGTGAGTGTAATAAATCTTCTGAGATATGTGAGGATGCATCCATCATGGACTTAGCTGCTTATCATGTTGAACCTATAAATCTTGGGTTCTTGGTCGTGGGAAAGCTTTGGTGTAACAAGCATGCTATATTTCCAAAAGGGTTTAAGAGTCGTGTTAAGTTCTATAACGTGCAAGATCCAATGAGAATAAGCTATTACGTCTCTGAGATTGTAGATGCAGGACTTCTGGGTCCACTCTTCAAGGTTACTTTGGAAGAATCTCAAGACGAGAGCTTCTCTTATGCCTCACCTCAGAAGTGCTGGGAAATGGTGTTGCTTAGAGTTAAGGAAGAGATCATGAGACGCAGCAACCAAAAACAAGATGTCCATATGTTGGAAAGCATCGATGGGTTAAAAATGTTTGGCTTTCGCTCTCCGTTTATTGTTCAGGCCACTGAGGCTCTTGACCCGAACCATGGCCAAGTGGAGTATTGGAACCATAAGAATGAGAAGGATTCGCTGGAAATGAAAGATTGCTTCATGTCAAATTCTTCCCAGAGCTTAAGCAAAGCAAGACTTTTTGGGGTTGATTTGAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000976 GO:0001067 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003700 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006259 GO:0006325 GO:0006355 GO:0006464 GO:0006479 GO:0006482 GO:0006725 GO:0006807 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0008168 GO:0008213 GO:0008214 GO:0008276 GO:0009314 GO:0009416 GO:0009555 GO:0009628 GO:0009648 GO:0009790 GO:0009791 GO:0009793 GO:0009889 GO:0009890 GO:0009892 GO:0009909 GO:0009910 GO:0009987 GO:0010154 GO:0010216 GO:0010228 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0016043 GO:0016569 GO:0016570 GO:0016571 GO:0016577 GO:0016740 GO:0016741 GO:0019219 GO:0019222 GO:0019538 GO:0022414 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032259 GO:0032451 GO:0032452 GO:0032453 GO:0032501 GO:0032502 GO:0034641 GO:0034647 GO:0034720 GO:0034721 GO:0036211 GO:0042054 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043414 GO:0043565 GO:0044212 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0045892 GO:0045934 GO:0046483 GO:0048229 GO:0048316 GO:0048519 GO:0048523 GO:0048573 GO:0048579 GO:0048580 GO:0048581 GO:0048583 GO:0048585 GO:0048586 GO:0048608 GO:0048731 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051093 GO:0051171 GO:0051172 GO:0051239 GO:0051241 GO:0051252 GO:0051253 GO:0051276 GO:0060255 GO:0061458 GO:0065007 GO:0070076 GO:0070988 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0097159 GO:0140096 GO:0140110 GO:1901360 GO:1901363 GO:1901564 GO:1902679 GO:1903506 GO:1903507 GO:1990837 GO:2000026 GO:2000028 GO:2000112 GO:2000113 GO:2000241 GO:2000242 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FYRC FYRN JmjC JmjN zf-C5HC2

Protein Analysis

806

Amino Acids

91.72

Weight (kDa)

6.1

Isoelectric Point (pI)

47.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
JmjN PF02375 62 - 95 5.7e-17 jmjN domain
JmjC PF02373 294 - 410 6e-48 JmjC domain, hydroxylase
zf-C5HC2 PF02928 514 - 566 2.6e-10 C5HC2 zinc finger
FYRN PF05964 640 - 686 1.8e-10 F/Y-rich N-terminus
FYRC PF05965 691 - 775 2.3e-21 F/Y rich C-terminus
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 2070
Acc36I ACCTGC 2 cut(s) 381, 1804
AccB1I GGYRCC 1 cut(s) 874
AccB7I CCANNNNNTGG 2 cut(s) 173, 2215
AciI CCGC 3 cut(s) 732, 1200, 1220
AclI AACGTT 1 cut(s) 908
AclWI GGATC 5 cut(s) 140, 153, 617, 838, 2012
AcoI YGGCCR 1 cut(s) 2299
AcsI RAATTY 7 cut(s) 343, 520, 545, 753, 802, 1317, 2368
AcuI CTGAAG 1 cut(s) 362
AfaI GTAC 3 cut(s) 653, 983, 1818
AfiI CCNNNNNNNGG 5 cut(s) 173, 725, 826, 2215, 2297
AflII CTTAAG 1 cut(s) 2383
AjuI GAANNNNNNNTTGG 2 cut(s) 507, 539
Alw26I GTCTC 6 cut(s) 303, 1280, 1305, 1763, 2047, 2176
AlwI GGATC 5 cut(s) 140, 153, 617, 838, 2012
AoxI GGCC 4 cut(s) 164, 1431, 2271, 2299
ApeKI GCWGC 5 cut(s) 17, 1331, 1581, 1898, 2187
ApoI RAATTY 7 cut(s) 343, 520, 545, 753, 802, 1317, 2368
ArsI GACNNNNNNTTYG 2 cut(s) 581, 613
Asp700I GAANNNNTTC 1 cut(s) 1400
AspS9I GGNCC 3 cut(s) 389, 539, 2072
AsuC2I CCSGG 2 cut(s) 993, 1124
AsuHPI GGTGA 5 cut(s) 188, 1234, 1727, 1856, 2121
AsuII TTCGAA 1 cut(s) 531
AvaII GGWCC 3 cut(s) 389, 539, 2072
BaeGI GKGCMC 1 cut(s) 92
BalI TGGCCA 1 cut(s) 2301
BamHI GGATCC 1 cut(s) 145
BanI GGYRCC 1 cut(s) 874
BarI GAAGNNNNNNTAC 2 cut(s) 1843, 1875
BbsI GAAGAC 1 cut(s) 410
BbvI GCAGC 5 cut(s) 4, 1343, 1568, 1885, 2199
BccI CCATC 7 cut(s) 135, 634, 1442, 1447, 1498, 1892, 2222
BcgI CGANNNNNNTGC 2 cut(s) 1167, 1201
BcnI CCSGG 2 cut(s) 993, 1124
BcoDI GTCTC 6 cut(s) 303, 1280, 1305, 1763, 2047, 2176
BfaI CTAG 6 cut(s) 45, 108, 138, 1013, 1173, 1788
BfmI CTRYAG 1 cut(s) 824
BfrI CTTAAG 1 cut(s) 2383
BfuAI ACCTGC 2 cut(s) 381, 1804
BglI GCCNNNNNGGC 2 cut(s) 1439, 2279
BglII AGATCT 1 cut(s) 858
BisI GCNGC 5 cut(s) 18, 1332, 1582, 1899, 2188
BlsI GCNGC 5 cut(s) 19, 1333, 1583, 1900, 2189
BmcAI AGTACT 1 cut(s) 653
Bme1390I CCNGG 2 cut(s) 993, 1124
Bme18I GGWCC 3 cut(s) 389, 539, 2072
BmgT120I GGNCC 3 cut(s) 389, 539, 2072
BmiI GGNNCC 7 cut(s) 6, 147, 391, 876, 1233, 2073, 2318
BmrFI CCNGG 2 cut(s) 993, 1124
BmrI ACTGGG 1 cut(s) 1017
BmsI GCATC 6 cut(s) 1551, 1573, 1867, 1889, 2047, 2232
BmuI ACTGGG 1 cut(s) 1017
BpiI GAAGAC 1 cut(s) 410
BplI GAGNNNNNCTC 4 cut(s) 1676, 1708, 2102, 2134
BpmI CTGGAG 2 cut(s) 168, 676
Bpu10I CCTNAGC 1 cut(s) 250
Bpu14I TTCGAA 1 cut(s) 531
BpuEI CTTGAG 4 cut(s) 427, 561, 575, 2088
BpuMI CCSGG 2 cut(s) 993, 1124
Bsa29I ATCGAT 1 cut(s) 2226
BsaI GGTCTC 1 cut(s) 303
BsaJI CCNNGG 4 cut(s) 501, 878, 1324, 2296
BsaWI WCCGGW 1 cut(s) 1234
BsaXI ACNNNNNCTCC 2 cut(s) 1110, 1140
Bsc4I CCNNNNNNNGG 5 cut(s) 173, 725, 826, 2215, 2297
Bse118I RCCGGY 1 cut(s) 309
Bse1I ACTGG 5 cut(s) 185, 659, 1012, 1083, 1582
Bse3DI GCAATG 1 cut(s) 1029
BseCI ATCGAT 1 cut(s) 2226
BseDI CCNNGG 4 cut(s) 501, 878, 1324, 2296
BseGI GGATG 4 cut(s) 121, 1458, 1880, 1882
BseLI CCNNNNNNNGG 5 cut(s) 173, 725, 826, 2215, 2297
BseMI GCAATG 1 cut(s) 1029
BseMII CTCAG 9 cut(s) 35, 876, 1100, 1371, 1787, 1854, 2037, 2147, 2268
BseNI ACTGG 5 cut(s) 185, 659, 1012, 1083, 1582
BseRI GAGGAG 4 cut(s) 48, 221, 291, 650
BseSI GKGCMC 1 cut(s) 92
BseXI GCAGC 5 cut(s) 4, 1343, 1568, 1885, 2199
BseYI CCCAGC 1 cut(s) 2142
BsgI GTGCAG 1 cut(s) 1233
Bsh1285I CGRYCG 1 cut(s) 510
BshFI GGCC 4 cut(s) 166, 1433, 2273, 2301
BshNI GGYRCC 1 cut(s) 874
BshVI ATCGAT 1 cut(s) 2226
BsiEI CGRYCG 1 cut(s) 510
BsiSI CCGG 5 cut(s) 149, 310, 992, 1124, 1235
BslFI GGGAC 4 cut(s) 231, 715, 1106, 1336
BslI CCNNNNNNNGG 5 cut(s) 173, 725, 826, 2215, 2297
BsmAI GTCTC 6 cut(s) 303, 1280, 1305, 1763, 2047, 2176
BsmBI CGTCTC 3 cut(s) 1305, 2047, 2176
BsmFI GGGAC 4 cut(s) 231, 715, 1106, 1336
BsmI GAATGC 3 cut(s) 1150, 1267, 1544
BsnI GGCC 4 cut(s) 166, 1433, 2273, 2301
Bso31I GGTCTC 1 cut(s) 303
Bsp119I TTCGAA 1 cut(s) 531
Bsp1286I GDGCHC 1 cut(s) 92
Bsp19I CCATGG 2 cut(s) 878, 2296
BspACI CCGC 3 cut(s) 732, 1200, 1220
BspANI GGCC 4 cut(s) 166, 1433, 2273, 2301
BspCNI CTCAG 9 cut(s) 34, 875, 1099, 1370, 1786, 1855, 2038, 2146, 2269
BspDI ATCGAT 1 cut(s) 2226
BspHI TCATGA 3 cut(s) 1072, 1309, 2178
BspLI GGNNCC 7 cut(s) 6, 147, 391, 876, 1233, 2073, 2318
BspMAI CTGCAG 1 cut(s) 828
BspMI ACCTGC 2 cut(s) 381, 1804
BspPI GGATC 5 cut(s) 140, 153, 617, 838, 2012
BspT104I TTCGAA 1 cut(s) 531
BspT107I GGYRCC 1 cut(s) 874
BspTI CTTAAG 1 cut(s) 2383
BspTNI GGTCTC 1 cut(s) 303
BsrDI GCAATG 1 cut(s) 1029
BsrFI RCCGGY 1 cut(s) 309
BsrI ACTGG 5 cut(s) 185, 659, 1012, 1083, 1582
BssAI RCCGGY 1 cut(s) 309
BssECI CCNNGG 4 cut(s) 501, 878, 1324, 2296
BssT1I CCWWGG 4 cut(s) 501, 878, 1324, 2296
Bst4CI ACNGT 7 cut(s) 288, 451, 1211, 1418, 1446, 1529, 1655
Bst6I CTCTTC 4 cut(s) 510, 1391, 2084, 2166
BstAFI CTTAAG 1 cut(s) 2383
BstAPI GCANNNNNTGC 2 cut(s) 1548, 1590
BstBI TTCGAA 1 cut(s) 531
BstC8I GCNNGC 5 cut(s) 225, 311, 968, 1248, 1965
BstDSI CCRYGG 2 cut(s) 878, 2296
BstF5I GGATG 4 cut(s) 121, 1458, 1880, 1882
BstMAI GTCTC 6 cut(s) 303, 1280, 1305, 1763, 2047, 2176
BstMCI CGRYCG 1 cut(s) 510
BstMWI GCNNNNNNNGC 5 cut(s) 1340, 1439, 1548, 1590, 2279
BstNSI RCATGY 3 cut(s) 898, 923, 1967
BstSCI CCNGG 2 cut(s) 991, 1122
BstSFI CTRYAG 1 cut(s) 824
BstSLI GKGCMC 1 cut(s) 92
BstV1I GCAGC 5 cut(s) 4, 1343, 1568, 1885, 2199
BstV2I GAAGAC 1 cut(s) 410
BstX2I RGATCY 5 cut(s) 145, 622, 830, 858, 2017
BstXI CCANNNNNNTGG 3 cut(s) 978, 1007, 1753
BstYI RGATCY 5 cut(s) 145, 622, 830, 858, 2017
Bsu15I ATCGAT 1 cut(s) 2226
BsuRI GGCC 4 cut(s) 166, 1433, 2273, 2301
BsuTUI ATCGAT 1 cut(s) 2226
BtgI CCRYGG 2 cut(s) 878, 2296
BtsCI GGATG 4 cut(s) 121, 1458, 1880, 1882
BtsIMutI CAGTG 3 cut(s) 19, 944, 2274
BveI ACCTGC 2 cut(s) 381, 1804
Cac8I GCNNGC 5 cut(s) 225, 311, 968, 1248, 1965
CciI TCATGA 3 cut(s) 1072, 1309, 2178
Cfr10I RCCGGY 1 cut(s) 309
Cfr13I GGNCC 3 cut(s) 389, 539, 2072
ClaI ATCGAT 1 cut(s) 2226
CseI GACGC 1 cut(s) 2193
Csp6I GTAC 3 cut(s) 652, 982, 1817
CviQI GTAC 3 cut(s) 652, 982, 1817
DrdI GACNNNNNNGTC 1 cut(s) 2070
DseDI GACNNNNNNGTC 1 cut(s) 2070
EaeI YGGCCR 1 cut(s) 2299
Eam1104I CTCTTC 4 cut(s) 510, 1391, 2084, 2166
EarI CTCTTC 4 cut(s) 510, 1391, 2084, 2166
Eco130I CCWWGG 4 cut(s) 501, 878, 1324, 2296
Eco31I GGTCTC 1 cut(s) 303
Eco47I GGWCC 3 cut(s) 389, 539, 2072
Eco57I CTGAAG 1 cut(s) 362
EcoO109I RGGNCCY 1 cut(s) 389
EcoT14I CCWWGG 4 cut(s) 501, 878, 1324, 2296
EcoT22I ATGCAT 2 cut(s) 1544, 1882
ErhI CCWWGG 4 cut(s) 501, 878, 1324, 2296
Esp3I CGTCTC 3 cut(s) 1305, 2047, 2176
FalI AAGNNNNNCTT 6 cut(s) 207, 239, 1725, 1757, 2382, 2414
FaqI GGGAC 4 cut(s) 231, 715, 1106, 1336
FauNDI CATATG 1 cut(s) 2211
Fnu4HI GCNGC 5 cut(s) 18, 1332, 1582, 1899, 2188
FokI GGATG 4 cut(s) 108, 1465, 1867, 1889
Fsp4HI GCNGC 5 cut(s) 18, 1332, 1582, 1899, 2188
FspBI CTAG 6 cut(s) 45, 108, 138, 1013, 1173, 1788
GluI GCNGC 5 cut(s) 18, 1332, 1582, 1899, 2188
GsaI CCCAGC 1 cut(s) 2146
GsuI CTGGAG 2 cut(s) 168, 676
HaeIII GGCC 4 cut(s) 166, 1433, 2273, 2301
HapII CCGG 5 cut(s) 149, 310, 992, 1124, 1235
HgaI GACGC 1 cut(s) 2193
HincII GTYRAC 1 cut(s) 370
HindII GTYRAC 1 cut(s) 370
HindIII AAGCTT 2 cut(s) 1734, 1946
HpaII CCGG 5 cut(s) 149, 310, 992, 1124, 1235
HphI GGTGA 5 cut(s) 188, 1234, 1727, 1856, 2121
Hpy166II GTNNAC 2 cut(s) 370, 2075
Hpy8I GTNNAC 2 cut(s) 370, 2075
Hpy99I CGWCG 2 cut(s) 292, 455
HpyCH4III ACNGT 7 cut(s) 288, 451, 1211, 1418, 1446, 1529, 1655
HpyCH4IV ACGT 5 cut(s) 244, 908, 1298, 2010, 2040
HpyF10VI GCNNNNNNNGC 5 cut(s) 1340, 1439, 1548, 1590, 2279
HpySE526I ACGT 5 cut(s) 244, 908, 1298, 2010, 2040
KroI GCCGGC 1 cut(s) 309
KroNI GCCGGC 1 cut(s) 311
LmnI GCTCC 4 cut(s) 4, 187, 1237, 1328
Lsp1109I GCAGC 5 cut(s) 4, 1343, 1568, 1885, 2199
LweI GCATC 6 cut(s) 1551, 1573, 1867, 1889, 2047, 2232
MaeI CTAG 6 cut(s) 45, 108, 138, 1013, 1173, 1788
MaeII ACGT 5 cut(s) 244, 908, 1298, 2010, 2040
MaeIII GTNAC 6 cut(s) 1081, 1446, 1556, 1670, 1955, 2086
MflI RGATCY 5 cut(s) 145, 622, 830, 858, 2017
MhlI GDGCHC 1 cut(s) 92
MlsI TGGCCA 1 cut(s) 2301
MluNI TGGCCA 1 cut(s) 2301
MlyI GAGTC 5 cut(s) 584, 1128, 1282, 1765, 1999
MmeI TCCRAC 5 cut(s) 598, 779, 782, 1121, 2196
Mox20I TGGCCA 1 cut(s) 2301
Mph1103I ATGCAT 2 cut(s) 1544, 1882
MroNI GCCGGC 1 cut(s) 309
MroXI GAANNNNTTC 1 cut(s) 1400
MscI TGGCCA 1 cut(s) 2301
MslI CAYNNNNRTG 1 cut(s) 2325
Msp20I TGGCCA 1 cut(s) 2301
MspA1I CMGCKG 1 cut(s) 1392
MspCI CTTAAG 1 cut(s) 2383
MspI CCGG 5 cut(s) 149, 310, 992, 1124, 1235
MspR9I CCNGG 2 cut(s) 993, 1124
Mva1269I GAATGC 3 cut(s) 1150, 1267, 1544
MwoI GCNNNNNNNGC 5 cut(s) 1340, 1439, 1548, 1590, 2279
NaeI GCCGGC 1 cut(s) 311
NciI CCSGG 2 cut(s) 993, 1124
NcoI CCATGG 2 cut(s) 878, 2296
NdeI CATATG 1 cut(s) 2211
NgoMIV GCCGGC 1 cut(s) 309
NlaIV GGNNCC 7 cut(s) 6, 147, 391, 876, 1233, 2073, 2318
NmuCI GTSAC 1 cut(s) 1556
NsiI ATGCAT 2 cut(s) 1544, 1882
NspI RCATGY 3 cut(s) 898, 923, 1967
NspV TTCGAA 1 cut(s) 531
PaeI GCATGC 1 cut(s) 1967
PagI TCATGA 3 cut(s) 1072, 1309, 2178
PctI GAATGC 3 cut(s) 1150, 1267, 1544
PdiI GCCGGC 1 cut(s) 311
PdmI GAANNNNTTC 1 cut(s) 1400
PflMI CCANNNNNTGG 2 cut(s) 173, 2215
PfoI TCCNGGA 1 cut(s) 991
PkrI GCNGC 5 cut(s) 19, 1333, 1583, 1900, 2189
PleI GAGTC 5 cut(s) 584, 1127, 1282, 1765, 1998
PpsI GAGTC 5 cut(s) 584, 1127, 1282, 1765, 1998
PpuMI RGGWCCY 1 cut(s) 389
Psp1406I AACGTT 1 cut(s) 908
Psp5II RGGWCCY 1 cut(s) 389
PspFI CCCAGC 1 cut(s) 2142
PspN4I GGNNCC 7 cut(s) 6, 147, 391, 876, 1233, 2073, 2318
PspPI GGNCC 3 cut(s) 389, 539, 2072
PspPPI RGGWCCY 1 cut(s) 389
PstI CTGCAG 1 cut(s) 828
PsuI RGATCY 5 cut(s) 145, 622, 830, 858, 2017
PvuII CAGCTG 1 cut(s) 1392
RsaI GTAC 3 cut(s) 653, 983, 1818
RsaNI GTAC 3 cut(s) 652, 982, 1817
RseI CAYNNNNRTG 1 cut(s) 2325
SatI GCNGC 5 cut(s) 18, 1332, 1582, 1899, 2188
Sau96I GGNCC 3 cut(s) 389, 539, 2072
ScaI AGTACT 1 cut(s) 653
SchI GAGTC 5 cut(s) 584, 1128, 1282, 1765, 1999
ScrFI CCNGG 2 cut(s) 993, 1124
SduI GDGCHC 1 cut(s) 92
SfaNI GCATC 6 cut(s) 1551, 1573, 1867, 1889, 2047, 2232
SfcI CTRYAG 1 cut(s) 824
SfuI TTCGAA 1 cut(s) 531
SinI GGWCC 3 cut(s) 389, 539, 2072
SmiMI CAYNNNNRTG 1 cut(s) 2325
SmlI CTYRAG 5 cut(s) 442, 554, 576, 2103, 2383
SmoI CTYRAG 5 cut(s) 442, 554, 576, 2103, 2383
SphI GCATGC 1 cut(s) 1967
SsiI CCGC 3 cut(s) 732, 1200, 1220
SspMI CTAG 6 cut(s) 45, 108, 138, 1013, 1173, 1788
StyD4I CCNGG 2 cut(s) 991, 1122
StyI CCWWGG 4 cut(s) 501, 878, 1324, 2296
TaaI ACNGT 7 cut(s) 288, 451, 1211, 1418, 1446, 1529, 1655
TaiI ACGT 5 cut(s) 247, 911, 1301, 2013, 2043
TaqII GACCGA 1 cut(s) 524
TatI WGTACW 1 cut(s) 651
TscAI CASTG 3 cut(s) 19, 951, 2281
TseFI GTSAC 1 cut(s) 1556
TseI GCWGC 5 cut(s) 17, 1331, 1581, 1898, 2187
Tsp45I GTSAC 1 cut(s) 1556
TspDTI ATGAA 9 cut(s) 171, 696, 1061, 1068, 1089, 1626, 1648, 2350, 2363
TspGWI ACGGA 6 cut(s) 105, 439, 719, 999, 1465, 2247
TspRI CASTG 3 cut(s) 19, 951, 2281
Van91I CCANNNNNTGG 2 cut(s) 173, 2215
Vha464I CTTAAG 1 cut(s) 2383
VpaK11BI GGWCC 3 cut(s) 389, 539, 2072
XapI RAATTY 7 cut(s) 343, 520, 545, 753, 802, 1317, 2368
XceI RCATGY 3 cut(s) 898, 923, 1967
XcmI CCANNNNNNNNNTGG 1 cut(s) 291
XmnI GAANNNNTTC 1 cut(s) 1400
XspI CTAG 6 cut(s) 45, 108, 138, 1013, 1173, 1788
ZrmI AGTACT 1 cut(s) 653
Zsp2I ATGCAT 2 cut(s) 1544, 1882
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.