AT4G20400

lysine-specific demethylase JMJ14 isoform X1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
OG0002633
Physical Location & Seq
Forward (+)
11008558 .. 11013860
5303 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G20400.1

Sequence Viewer

Length: 2865 bp
ATGGATCAGCTTGCATCTCTAGCAGAGTCTGTGGCTATGGAGGAAGATTCTGAGAAACAATCGATTAAAGGAGAGAGTAGTCTTGAACCTGACTCTACTCCTTCTAGTCCTAAAATAACTGCTAGGTGGAATCCATCAGAAGCTTGCAGGCCTTTGGTTGATGACGCTCCCATCTTTTATCCCACTAATGAGGATTTTGATGATCCACTTGGTTACATAGAGAAGTTGCGCTCTAAAGCAGAATCATATGGCATATGTCGAATTGTGCCGCCTGTTGCATGGAGGCCCCCTTGCCCTCTGAAGGAGAAAAAAATATGGGAGAATTCTAAATTTCCCACCCGGATTCAGTTCATTGACTTGCTTCAAAACCGAGAACCGATTAAAAAATCTACTAAAACCAAGAAGAGAAAACGGAGAAGAATCTCTAAAATTGGATACACAAGAAGAAAAAGAGATTCAGGCTGTGATACGGCTTCCTCTGGCTCTAGTGATAGTGAAGGAAAATTTGGTTTTCAGACTGGGCCAGATTTTACCCTGGAAGAATTTCAGAAGTATGATGAATACTTTAAGGAATGCTATTTTCAGTCAGAGGATCATCCTGGTTCCAAAGCGTCTGAAAATAAGAAATTTAAACCTAAGGTTAAGGACCTTGAAGGTGAATATTGGCGGATAGTGGAGCAGGCAACTGATGAAGTAGAGGTGTACTATGGAGCTGACTTGGAAACAAAGAAATTTGGAAGTGGTTTCCCAAAGTATAAACCGGGGTATCCTATAAGTGAAGCAGATCAATACTCTCAATGTGGTTGGAACCTAAATAATTTGTCCCGTCTGCCCGGATCAGTTCTAGCTTTTGAGAGCTGCGATATCTCAGGAGTCATTGTGCCATGGCTTTATGTTGGAATGTGCTTTTCAACTTTTTGTTGGCATGTTGAAGATCATCACCTTTATTCCATGAACTACTTACACACAGGTGATCCAAAAGTTTGGTATGGGATCCCTGGAAACCATGCTGAGTCTTTTGAAAATGTAATGAAAAAGCGTCTTCCAGATTTGTTTGAAGAACAGCCTGACTTGCTACATCAACTGGTCACTCAGTTATCTCCAAGAATCTTAAAAGAGGAGGGAGTACCTGTCTATCGAGCTGTCCAGCGCAGTGGAGAATTCATTCTAACCTTCCCTAAGGCCTATCATTCTGGGTTTAATTGTGGTTTCAACTGTGCGGAAGCAGTAAATGTTGCACCAGTTGATTGGCTGGTTCATGGACAGAATGCAGTGGAAGGCTATAGCAAGCAGCGGCGAAAGAGTTCATTGTCACATGACAAGCTGCTTCTTGGAGCTGCTATGGAAGCTACTTATTGCCTCTGGGAGCTTTCACTTTCAAAGAAGAAGACTCCTGTGATTGCGAGATGGAAAAGGGTTTGTAGTGAGGATGGATTGCTTACGAAGGCAGTCAAGAAGCGTGTGCAGATGGAAGAAGAAAGACTAAATCACCTTCAAGATGGTTTTAGCTTGCGAAAGATGGAGGGTGATTTCGACAATAAGAGAGAACGGGAGTGCTTCTTGTGCTTCTATGATTTGCATATGTCTGCTTCAAGCTGCAAGTGTTCCCCCAACCGGTTTGCATGTCTTATCCACGCTAAGGATCTGTGTTCATGTGAAAGTAAGGATAGATATATCCTAATTCGCCACACCTTGGATGAGTTATGGGCACTGGTCAGAGCTCTAGAAGGGGATCTTGATGCCATAGACCTATGGGCAAGTAAATGTCGTGACCAGTATCCTTCACAGCATCCAAGAGCAAGAGAATATGCTTACCTCAAGTCTGCCCCATGTATAAAGAGCCGTGGTTCATCAAAAGTACAGCAGCGAGAACAAAACAATCTTCAGTTAGTGTCTGAACGCTTACAAAGTGATCTAACCTCAAACAAGGAAGTTCAGTTGAAACAAGATGGTGATTCAGATGTAAATCGCCATGGTCATGAAAGCGAAAGAAATCATGTACATGGGATCACTGATAAGTCAGCTGTCACGGATGTAAAACTTGGTGTGGGAGGTAAGTTTGATGAGAAGAAGATTTCGGTTGAATCTCAAAACCCACATTCAGTTTCAGATGTAGGGTGTAGCGAGCTGGCGAAGAAAGTGGATGGTTGTTTAGGAGGGAAGGACCAAAATGCTGCAACCAATAGGTTAAGTCTCTCTGTTGAGCTTTTGAGTTCTGGATCTCTCGTTGTTAAAAAGCTGTGGTGCAGTAAACAGGCCATATACCCAAAAGGGTTCAAGAGCCGTGTTAAGTTCTTAAGTGTGCTTGACCCAACAAACCTAACCAACTACATCTCAGAGGTTCTGGATGCAGGGCTTCTTGGTCCATTGTTCAGGGTCTCAGTAGAAGATTACCCCACTGAGAATTTCTCGAATGTATCTGCTGAAAAGTGCTGGCAAATGGTGACACAAAGGCTCAAACTCGAAATCATCAAGAAATGTGATCAACCAGTTAGCTCTTTGACCTCTTTACAACCTTTGGAGAGTATAAATGGGCTTGAAATGTTTGGATTTCTCTCCCCGCACGTAATTAAGGTGGTTGAGGCTCTTGATCCAAAGCATCAATTGGAGGAGTATTGGAACCAAAAAGCAGTGAAACTGTTTGGTGCTGAACCAATAAAGGAAGGAGAAAAGGATGATACAGAGAAAGGAGGGGCTTCAGATCCCTCTTTGGACCGGGACACAAGGCTTCTGCGTGGACTGTTGAAGAAGGCGACACCTGAAGAATTAGTAATGATGCATGGACTTCTGTGTGGTGAGACTCGCAACACCGAGCTCAAGGAAGAGCTCTCTACTTTGGTTGATAAGATGGAGATAAGTCCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000976 GO:0001067 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003700 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006259 GO:0006325 GO:0006355 GO:0006464 GO:0006479 GO:0006482 GO:0006725 GO:0006807 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0008168 GO:0008213 GO:0008214 GO:0008276 GO:0009314 GO:0009416 GO:0009555 GO:0009628 GO:0009648 GO:0009790 GO:0009791 GO:0009793 GO:0009889 GO:0009890 GO:0009892 GO:0009909 GO:0009910 GO:0009987 GO:0010154 GO:0010216 GO:0010228 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0016043 GO:0016569 GO:0016570 GO:0016571 GO:0016577 GO:0016740 GO:0016741 GO:0019219 GO:0019222 GO:0019538 GO:0022414 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032259 GO:0032451 GO:0032452 GO:0032453 GO:0032501 GO:0032502 GO:0034641 GO:0034647 GO:0034720 GO:0034721 GO:0036211 GO:0042054 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043414 GO:0043565 GO:0044212 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0045892 GO:0045934 GO:0046483 GO:0048229 GO:0048316 GO:0048519 GO:0048523 GO:0048573 GO:0048579 GO:0048580 GO:0048581 GO:0048583 GO:0048585 GO:0048586 GO:0048608 GO:0048731 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051093 GO:0051171 GO:0051172 GO:0051239 GO:0051241 GO:0051252 GO:0051253 GO:0051276 GO:0060255 GO:0061458 GO:0065007 GO:0070076 GO:0070988 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0097159 GO:0140096 GO:0140110 GO:1901360 GO:1901363 GO:1901564 GO:1902679 GO:1903506 GO:1903507 GO:1990837 GO:2000026 GO:2000028 GO:2000112 GO:2000113 GO:2000241 GO:2000242 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FYRC FYRN JmjC JmjN zf-C5HC2

Protein Analysis

954

Amino Acids

108.15

Weight (kDa)

6.49

Isoelectric Point (pI)

46.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
JmjN PF02375 57 - 90 5.4e-15 jmjN domain
JmjC PF02373 296 - 412 2.2e-48 JmjC domain, hydroxylase
zf-C5HC2 PF02928 519 - 570 7.8e-14 C5HC2 zinc finger
FYRN PF05964 733 - 783 1.9e-12 F/Y-rich N-terminus
FYRC PF05965 788 - 875 1.5e-20 F/Y rich C-terminus
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1693
AciI CCGC 5 cut(s) 269, 667, 1220, 1294, 2561
AcsI RAATTY 8 cut(s) 322, 329, 503, 542, 626, 731, 1160, 2404
AcuI CTGAAG 4 cut(s) 320, 1868, 2682, 2781
AfaI GTAC 4 cut(s) 704, 1128, 1860, 2001
AfiI CCNNNNNNNGG 4 cut(s) 301, 1614, 1639, 1693
AflII CTTAAG 1 cut(s) 2296
AgeI ACCGGT 1 cut(s) 1614
AjnI CCWGG 3 cut(s) 534, 598, 997
AjuI GAANNNNNNNTTGG 2 cut(s) 489, 521
AleI CACNNNNGTG 1 cut(s) 969
Alw21I GWGCWC 3 cut(s) 1723, 2817, 2829
Alw26I GTCTC 3 cut(s) 2198, 2383, 2792
AlwNI CAGNNNCTG 1 cut(s) 29
AoxI GGCC 5 cut(s) 149, 284, 521, 1182, 2256
ApeKI GCWGC 7 cut(s) 858, 1291, 1324, 1337, 1596, 1864, 2174
ApoI RAATTY 8 cut(s) 322, 329, 503, 542, 626, 731, 1160, 2404
AsiGI ACCGGT 1 cut(s) 1614
Asp700I GAANNNNTTC 3 cut(s) 543, 1164, 1303
AspLEI GCGC 2 cut(s) 231, 1152
AspS9I GGNCC 6 cut(s) 285, 521, 646, 2164, 2363, 2713
AsuC2I CCSGG 4 cut(s) 340, 762, 834, 2717
AsuHPI GGTGA 8 cut(s) 668, 932, 983, 1481, 1538, 1964, 2455, 2807
AvaII GGWCC 4 cut(s) 646, 2164, 2363, 2713
AxyI CCTNAGG 2 cut(s) 636, 1179
BaeGI GKGCMC 1 cut(s) 1711
BaeI ACNNNNGTAYC 2 cut(s) 749, 782
BamHI GGATCC 1 cut(s) 993
BanII GRGCYC 3 cut(s) 1723, 2817, 2829
BbsI GAAGAC 2 cut(s) 1034, 1394
Bbv12I GWGCWC 3 cut(s) 1723, 2817, 2829
BbvI GCAGC 7 cut(s) 845, 1303, 1311, 1324, 1583, 1876, 2161
BceAI ACGGC 3 cut(s) 486, 1827, 2268
BciT130I CCWGG 3 cut(s) 536, 600, 999
BciVI GTATCC 3 cut(s) 428, 777, 1788
BclI TGATCA 1 cut(s) 2482
BcnI CCSGG 4 cut(s) 340, 762, 834, 2717
BcoDI GTCTC 3 cut(s) 2198, 2383, 2792
BfaI CTAG 6 cut(s) 20, 105, 123, 486, 845, 1724
BfmI CTRYAG 1 cut(s) 1282
BfrI CTTAAG 1 cut(s) 2296
BfuI GTATCC 3 cut(s) 428, 777, 1788
BisI GCNGC 9 cut(s) 269, 859, 1292, 1295, 1325, 1338, 1597, 1865, 2175
BlsI GCNGC 9 cut(s) 270, 860, 1293, 1296, 1326, 1339, 1598, 1866, 2176
Bme1390I CCNGG 7 cut(s) 340, 536, 600, 762, 834, 999, 2717
Bme18I GGWCC 4 cut(s) 646, 2164, 2363, 2713
BmgT120I GGNCC 6 cut(s) 285, 521, 646, 2164, 2363, 2713
BmiI GGNNCC 5 cut(s) 287, 604, 809, 995, 2621
BmrFI CCNGG 7 cut(s) 340, 536, 600, 762, 834, 999, 2717
BmrI ACTGGG 1 cut(s) 528
BmsI GCATC 6 cut(s) 23, 1729, 1798, 2338, 2608, 2766
BmuI ACTGGG 1 cut(s) 528
BpiI GAAGAC 2 cut(s) 1034, 1394
BplI GAGNNNNNCTC 2 cut(s) 2393, 2425
Bpu10I CCTNAGC 1 cut(s) 1638
BpuEI CTTGAG 2 cut(s) 1802, 2801
BpuMI CCSGG 4 cut(s) 340, 762, 834, 2717
Bsa29I ATCGAT 1 cut(s) 62
BsaAI YACGTR 1 cut(s) 2566
BsaBI GATNNNNATC 1 cut(s) 1965
BsaI GGTCTC 1 cut(s) 2383
BsaJI CCNNGG 7 cut(s) 534, 761, 884, 997, 1692, 1843, 1972
BsaWI WCCGGW 1 cut(s) 1614
BsaXI ACNNNNNCTCC 4 cut(s) 864, 894, 1116, 1146
Bsc4I CCNNNNNNNGG 4 cut(s) 301, 1614, 1639, 1693
Bse118I RCCGGY 1 cut(s) 1614
Bse1I ACTGG 6 cut(s) 523, 1089, 1241, 1716, 1774, 2489
Bse21I CCTNAGG 2 cut(s) 636, 1179
Bse8I GATNNNNATC 1 cut(s) 1965
BseBI CCWGG 3 cut(s) 536, 600, 999
BseCI ATCGAT 1 cut(s) 62
BseDI CCNNGG 7 cut(s) 534, 761, 884, 997, 1692, 1843, 1972
BseGI GGATG 8 cut(s) 595, 1435, 1702, 1789, 2038, 2149, 2353, 2680
BseJI GATNNNNATC 1 cut(s) 1965
BseLI CCNNNNNNNGG 4 cut(s) 301, 1614, 1639, 1693
BseMII CTCAG 7 cut(s) 42, 882, 1002, 1106, 2349, 2391, 2394
BseNI ACTGG 6 cut(s) 523, 1089, 1241, 1716, 1774, 2489
BseRI GAGGAG 2 cut(s) 1133, 2624
BseSI GKGCMC 1 cut(s) 1711
BseXI GCAGC 7 cut(s) 845, 1303, 1311, 1324, 1583, 1876, 2161
BsgI GTGCAG 2 cut(s) 1484, 2266
BshFI GGCC 5 cut(s) 151, 286, 523, 1184, 2258
BshTI ACCGGT 1 cut(s) 1614
BshVI ATCGAT 1 cut(s) 62
BsiHKAI GWGCWC 3 cut(s) 1723, 2817, 2829
BsiSI CCGG 5 cut(s) 340, 761, 834, 1615, 2716
BslFI GGGAC 2 cut(s) 808, 2732
BslI CCNNNNNNNGG 4 cut(s) 301, 1614, 1639, 1693
BsmAI GTCTC 3 cut(s) 2198, 2383, 2792
BsmFI GGGAC 2 cut(s) 808, 2732
BsmI GAATGC 2 cut(s) 578, 1273
BsnI GGCC 5 cut(s) 151, 286, 523, 1184, 2258
Bso31I GGTCTC 1 cut(s) 2383
Bsp1286I GDGCHC 4 cut(s) 1711, 1723, 2817, 2829
Bsp1407I TGTACA 1 cut(s) 1999
Bsp19I CCATGG 2 cut(s) 884, 1972
BspACI CCGC 5 cut(s) 269, 667, 1220, 1294, 2561
BspANI GGCC 5 cut(s) 151, 286, 523, 1184, 2258
BspCNI CTCAG 7 cut(s) 43, 881, 1003, 1105, 2348, 2392, 2393
BspDI ATCGAT 1 cut(s) 62
BspHI TCATGA 1 cut(s) 1978
BspLI GGNNCC 5 cut(s) 287, 604, 809, 995, 2621
BspQI GCTCTTC 1 cut(s) 2817
BspTI CTTAAG 1 cut(s) 2296
BspTNI GGTCTC 1 cut(s) 2383
BsrFI RCCGGY 1 cut(s) 1614
BsrGI TGTACA 1 cut(s) 1999
BsrI ACTGG 6 cut(s) 523, 1089, 1241, 1716, 1774, 2489
BssAI RCCGGY 1 cut(s) 1614
BssECI CCNNGG 7 cut(s) 534, 761, 884, 997, 1692, 1843, 1972
BssT1I CCWWGG 3 cut(s) 884, 1692, 1972
Bst2UI CCWGG 3 cut(s) 536, 600, 999
Bst4CI ACNGT 3 cut(s) 1217, 2640, 2742
Bst6I CTCTTC 2 cut(s) 398, 2817
BstAFI CTTAAG 1 cut(s) 2296
BstAUI TGTACA 1 cut(s) 1999
BstBAI YACGTR 1 cut(s) 2566
BstC8I GCNNGC 9 cut(s) 12, 145, 149, 681, 1289, 1511, 2126, 2130, 2435
BstDSI CCRYGG 3 cut(s) 884, 1843, 1972
BstF5I GGATG 8 cut(s) 595, 1435, 1702, 1789, 2038, 2149, 2353, 2680
BstHHI GCGC 2 cut(s) 231, 1152
BstMAI GTCTC 3 cut(s) 2198, 2383, 2792
BstMWI GCNNNNNNNGC 4 cut(s) 20, 1072, 1346, 1563
BstNI CCWGG 3 cut(s) 536, 600, 999
BstNSI RCATGY 2 cut(s) 929, 1626
BstSCI CCNGG 7 cut(s) 338, 534, 598, 760, 832, 997, 2715
BstSFI CTRYAG 1 cut(s) 1282
BstSLI GKGCMC 1 cut(s) 1711
BstV1I GCAGC 7 cut(s) 845, 1303, 1311, 1324, 1583, 1876, 2161
BstV2I GAAGAC 2 cut(s) 1034, 1394
BstX2I RGATCY 5 cut(s) 993, 1642, 1732, 2219, 2701
BstXI CCANNNNNNTGG 3 cut(s) 984, 1154, 1248
BstYI RGATCY 5 cut(s) 993, 1642, 1732, 2219, 2701
Bsu15I ATCGAT 1 cut(s) 62
Bsu36I CCTNAGG 2 cut(s) 636, 1179
BsuI GTATCC 3 cut(s) 428, 777, 1788
BsuRI GGCC 5 cut(s) 151, 286, 523, 1184, 2258
BsuTUI ATCGAT 1 cut(s) 62
BtgI CCRYGG 3 cut(s) 884, 1843, 1972
BtsCI GGATG 8 cut(s) 595, 1435, 1702, 1789, 2038, 2149, 2353, 2680
BtsI GCAGTG 3 cut(s) 1159, 1278, 2637
BtsIMutI CAGTG 6 cut(s) 1159, 1278, 1709, 2010, 2397, 2637
Cac8I GCNNGC 9 cut(s) 12, 145, 149, 681, 1289, 1511, 2126, 2130, 2435
CaiI CAGNNNCTG 1 cut(s) 29
CciI TCATGA 1 cut(s) 1978
CfoI GCGC 2 cut(s) 231, 1152
Cfr10I RCCGGY 1 cut(s) 1614
Cfr13I GGNCC 6 cut(s) 285, 521, 646, 2164, 2363, 2713
ClaI ATCGAT 1 cut(s) 62
CseI GACGC 3 cut(s) 173, 600, 1028
Csp6I GTAC 4 cut(s) 703, 1127, 1859, 2000
CspAI ACCGGT 1 cut(s) 1614
CviQI GTAC 4 cut(s) 703, 1127, 1859, 2000
DraI TTTAAA 1 cut(s) 631
Eam1104I CTCTTC 2 cut(s) 398, 2817
EarI CTCTTC 2 cut(s) 398, 2817
EciI GGCGGA 1 cut(s) 682
Ecl136II GAGCTC 3 cut(s) 1721, 2815, 2827
Eco130I CCWWGG 3 cut(s) 884, 1692, 1972
Eco147I AGGCCT 2 cut(s) 151, 1184
Eco24I GRGCYC 3 cut(s) 1723, 2817, 2829
Eco31I GGTCTC 1 cut(s) 2383
Eco32I GATATC 1 cut(s) 865
Eco47I GGWCC 4 cut(s) 646, 2164, 2363, 2713
Eco53kI GAGCTC 3 cut(s) 1721, 2815, 2827
Eco57I CTGAAG 4 cut(s) 320, 1868, 2682, 2781
Eco81I CCTNAGG 2 cut(s) 636, 1179
EcoICRI GAGCTC 3 cut(s) 1721, 2815, 2827
EcoO109I RGGNCCY 2 cut(s) 285, 646
EcoRI GAATTC 2 cut(s) 322, 1160
EcoRII CCWGG 3 cut(s) 534, 598, 997
EcoRV GATATC 1 cut(s) 865
EcoT14I CCWWGG 3 cut(s) 884, 1692, 1972
EcoT22I ATGCAT 1 cut(s) 2781
EcoT38I GRGCYC 3 cut(s) 1723, 2817, 2829
ErhI CCWWGG 3 cut(s) 884, 1692, 1972
FalI AAGNNNNNCTT 2 cut(s) 1719, 1751
FaqI GGGAC 2 cut(s) 808, 2732
FauI CCCGC 1 cut(s) 2568
FauNDI CATATG 3 cut(s) 247, 254, 1581
FbaI TGATCA 1 cut(s) 2482
Fnu4HI GCNGC 9 cut(s) 269, 859, 1292, 1295, 1325, 1338, 1597, 1865, 2175
FokI GGATG 8 cut(s) 582, 1442, 1709, 1776, 2045, 2156, 2360, 2687
FriOI GRGCYC 3 cut(s) 1723, 2817, 2829
Fsp4HI GCNGC 9 cut(s) 269, 859, 1292, 1295, 1325, 1338, 1597, 1865, 2175
FspBI CTAG 6 cut(s) 20, 105, 123, 486, 845, 1724
GlaI GCGC 2 cut(s) 230, 1151
GluI GCNGC 9 cut(s) 269, 859, 1292, 1295, 1325, 1338, 1597, 1865, 2175
HaeIII GGCC 5 cut(s) 151, 286, 523, 1184, 2258
HapII CCGG 5 cut(s) 340, 761, 834, 1615, 2716
HgaI GACGC 3 cut(s) 173, 600, 1028
HhaI GCGC 2 cut(s) 231, 1152
Hin6I GCGC 2 cut(s) 229, 1150
HinP1I GCGC 2 cut(s) 229, 1150
HindIII AAGCTT 1 cut(s) 141
HpaII CCGG 5 cut(s) 340, 761, 834, 1615, 2716
HphI GGTGA 8 cut(s) 668, 932, 983, 1481, 1538, 1964, 2455, 2807
Hpy166II GTNNAC 3 cut(s) 703, 2252, 2738
Hpy8I GTNNAC 3 cut(s) 703, 2252, 2738
HpyCH4III ACNGT 3 cut(s) 1217, 2640, 2742
HpyCH4IV ACGT 1 cut(s) 2565
HpyF10VI GCNNNNNNNGC 4 cut(s) 20, 1072, 1346, 1563
HpySE526I ACGT 1 cut(s) 2565
HspAI GCGC 2 cut(s) 229, 1150
Ksp22I TGATCA 1 cut(s) 2482
LguI GCTCTTC 1 cut(s) 2817
LmnI GCTCC 5 cut(s) 172, 676, 710, 1334, 1366
Lsp1109I GCAGC 7 cut(s) 845, 1303, 1311, 1324, 1583, 1876, 2161
LweI GCATC 6 cut(s) 23, 1729, 1798, 2338, 2608, 2766
MaeI CTAG 6 cut(s) 20, 105, 123, 486, 845, 1724
MaeII ACGT 1 cut(s) 2565
MaeIII GTNAC 6 cut(s) 212, 1087, 1311, 1769, 2026, 2443
MfeI CAATTG 1 cut(s) 2603
MflI RGATCY 5 cut(s) 993, 1642, 1732, 2219, 2701
MhlI GDGCHC 4 cut(s) 1711, 1723, 2817, 2829
MlyI GAGTC 6 cut(s) 35, 86, 882, 1022, 1384, 2794
MmeI TCCRAC 2 cut(s) 785, 877
Mph1103I ATGCAT 1 cut(s) 2781
MroXI GAANNNNTTC 3 cut(s) 543, 1164, 1303
MslI CAYNNNNRTG 3 cut(s) 969, 1977, 2001
MspA1I CMGCKG 2 cut(s) 1294, 2024
MspCI CTTAAG 1 cut(s) 2296
MspI CCGG 5 cut(s) 340, 761, 834, 1615, 2716
MspR9I CCNGG 7 cut(s) 340, 536, 600, 762, 834, 999, 2717
MunI CAATTG 1 cut(s) 2603
Mva1269I GAATGC 2 cut(s) 578, 1273
MvaI CCWGG 3 cut(s) 536, 600, 999
MwoI GCNNNNNNNGC 4 cut(s) 20, 1072, 1346, 1563
NciI CCSGG 4 cut(s) 340, 762, 834, 2717
NcoI CCATGG 2 cut(s) 884, 1972
NdeI CATATG 3 cut(s) 247, 254, 1581
NlaIV GGNNCC 5 cut(s) 287, 604, 809, 995, 2621
NmuCI GTSAC 5 cut(s) 1087, 1311, 1769, 2026, 2443
NsiI ATGCAT 1 cut(s) 2781
NspI RCATGY 2 cut(s) 929, 1626
OliI CACNNNNGTG 1 cut(s) 969
PagI TCATGA 1 cut(s) 1978
PceI AGGCCT 2 cut(s) 151, 1184
PciSI GCTCTTC 1 cut(s) 2817
PctI GAATGC 2 cut(s) 578, 1273
PdmI GAANNNNTTC 3 cut(s) 543, 1164, 1303
PfeI GAWTC 9 cut(s) 47, 130, 242, 343, 420, 455, 1107, 1955, 2084
PflMI CCANNNNNTGG 1 cut(s) 1693
PinAI ACCGGT 1 cut(s) 1614
PkrI GCNGC 9 cut(s) 270, 860, 1293, 1296, 1326, 1339, 1598, 1866, 2176
PleI GAGTC 6 cut(s) 34, 86, 881, 1021, 1384, 2794
PpsI GAGTC 6 cut(s) 34, 86, 881, 1021, 1384, 2794
Ppu21I YACGTR 1 cut(s) 2566
PpuMI RGGWCCY 1 cut(s) 646
Psp124BI GAGCTC 3 cut(s) 1723, 2817, 2829
Psp5II RGGWCCY 1 cut(s) 646
Psp6I CCWGG 3 cut(s) 534, 598, 997
PspGI CCWGG 3 cut(s) 534, 598, 997
PspN4I GGNNCC 5 cut(s) 287, 604, 809, 995, 2621
PspPI GGNCC 6 cut(s) 285, 521, 646, 2164, 2363, 2713
PspPPI RGGWCCY 1 cut(s) 646
PstNI CAGNNNCTG 1 cut(s) 29
PsuI RGATCY 5 cut(s) 993, 1642, 1732, 2219, 2701
PvuII CAGCTG 1 cut(s) 2024
RsaI GTAC 4 cut(s) 704, 1128, 1860, 2001
RsaNI GTAC 4 cut(s) 703, 1127, 1859, 2000
RseI CAYNNNNRTG 3 cut(s) 969, 1977, 2001
SacI GAGCTC 3 cut(s) 1723, 2817, 2829
SapI GCTCTTC 1 cut(s) 2817
SatI GCNGC 9 cut(s) 269, 859, 1292, 1295, 1325, 1338, 1597, 1865, 2175
Sau96I GGNCC 6 cut(s) 285, 521, 646, 2164, 2363, 2713
SchI GAGTC 6 cut(s) 35, 86, 882, 1022, 1384, 2794
ScrFI CCNGG 7 cut(s) 340, 536, 600, 762, 834, 999, 2717
SduI GDGCHC 4 cut(s) 1711, 1723, 2817, 2829
SfaNI GCATC 6 cut(s) 23, 1729, 1798, 2338, 2608, 2766
SfcI CTRYAG 1 cut(s) 1282
SinI GGWCC 4 cut(s) 646, 2164, 2363, 2713
SmiMI CAYNNNNRTG 3 cut(s) 969, 1977, 2001
SmlI CTYRAG 3 cut(s) 1817, 2296, 2816
SmoI CTYRAG 3 cut(s) 1817, 2296, 2816
SseBI AGGCCT 2 cut(s) 151, 1184
SsiI CCGC 5 cut(s) 269, 667, 1220, 1294, 2561
SspI AATATT 1 cut(s) 662
SspMI CTAG 6 cut(s) 20, 105, 123, 486, 845, 1724
SstI GAGCTC 3 cut(s) 1723, 2817, 2829
StuI AGGCCT 2 cut(s) 151, 1184
StyD4I CCNGG 7 cut(s) 338, 534, 598, 760, 832, 997, 2715
StyI CCWWGG 3 cut(s) 884, 1692, 1972
TaaI ACNGT 3 cut(s) 1217, 2640, 2742
TaiI ACGT 1 cut(s) 2568
TaqI TCGA 6 cut(s) 62, 259, 1138, 1533, 2411, 2463
TatI WGTACW 3 cut(s) 702, 1858, 1999
TauI GCSGC 2 cut(s) 271, 1297
TfiI GAWTC 9 cut(s) 47, 130, 242, 343, 420, 455, 1107, 1955, 2084
TscAI CASTG 6 cut(s) 1159, 1278, 1716, 2017, 2404, 2637
TseFI GTSAC 5 cut(s) 1087, 1311, 1769, 2026, 2443
TseI GCWGC 7 cut(s) 858, 1291, 1324, 1337, 1596, 1864, 2174
Tsp45I GTSAC 5 cut(s) 1087, 1311, 1769, 2026, 2443
TspGWI ACGGA 2 cut(s) 427, 2045
TspRI CASTG 6 cut(s) 1159, 1278, 1716, 2017, 2404, 2637
Van91I CCANNNNNTGG 1 cut(s) 1693
Vha464I CTTAAG 1 cut(s) 2296
VpaK11BI GGWCC 4 cut(s) 646, 2164, 2363, 2713
XapI RAATTY 8 cut(s) 322, 329, 503, 542, 626, 731, 1160, 2404
XbaI TCTAGA 1 cut(s) 1723
XceI RCATGY 2 cut(s) 929, 1626
XmnI GAANNNNTTC 3 cut(s) 543, 1164, 1303
XspI CTAG 6 cut(s) 20, 105, 123, 486, 845, 1724
Zsp2I ATGCAT 1 cut(s) 2781
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.