Prupe.6G349900_v2.0.a1

lysine-specific demethylase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
OG0002633
Physical Location & Seq
Reverse (-)
29844493 .. 29854061
9569 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G349900.10

Sequence Viewer

Length: 3684 bp
ATGGGGACAGAACTCATGAGAGTTTGCATAAAAGAAGATAACGATGAGTTTCCTTCAGTTCCACCCGGATTTGAGTCATTCACATCTTTCAGCTTAAAAAGGGTAAATGAAAGTGAGAAACAAGATAGTGAAAACAGAATTAGTTGCTCAGAGACTGCTAGTGTTTCTGAATCACAATCAGTTCAGATGGAGACTAACATTGCCACTGATGAGGTTGCAAAGAGGTCTCTCCGACGCAGACCATGGATAAACCATCGGCAACATGATAACAAGCCAGAGGATGAGTTTAACTCTGAGCGACTTGAACAAAATTTTGCTCTAAATTCTCTTCTTCCCAAGGGTGTTATACGCGGATGTCCACAATGTAGTAATTGCCAAAAGGTTTCTGCAAGATGGCATCCGGAGGATGGTCAAAGGCCCAACCTTCAGGATGCTCCTGTCTTCAAACCAACCGAAGAGGAGTTCAAAGATACATTGAAATATATAGCGAGCATACGTGCAAAAGCTGAACCATATGGTCTTTGTCGCATTGTTCCTCCCTCTTCTTGGAGACCTCCCTGTCCTCTCAAGGAAAAGGATATTTGGGAGACCTCTAAATTTGCTACTCGAGTCCAGAGAGTTGACAAACTGCAGAATCGAGATTCAATGAGAAAGATTCCGAAAAACCATAATCATATGAGGAAGAAAAGGAGAAGATGCACACGAATGGGGGCTGATTGTCCAAGCGGTGGCAGAGGATCTGGGGATGATGGATATTGTGAGGCTGAAAGGTTTGGGTTTGAACCTGGTCCAGAGTTTACTCTAGAAACATTTGAAAGATACGCTAATGACTTCAAGACCCAATACTTCAGCAAGAATGAACACATTACTGATATAGGAGGTAACTTGTCTAAACTTAAAGAGGGCTGGGAGCCATCTGTGGAAAATATTGAGGGCGAATATTGGCGGATGGTAGAGAGACCTACTGAAGAAATTGAGGTTCTATACGGGGCTGATTTGGAAACTGGAGTTTTCGGCAGTGGTTTTCCCAAGATGTCCAGTAAGGATGGTTTTGCTTCAGAAGAGCAGTACATAAAATCAGGCTGGAACTTGAACAACTTTCCTAGACTTCCTGGATCTGTTCTTTCTTATGAAAGCAGTGATATATCTGGTGTTCTGGTGCCATGGTTATACGTAGGGATGTGCTTTTCTTCTTTCTGCTGGCATGTTGAAGATCACCACTTGTACTCTTTAAATTATATGCATTGGGGTGCTCCAAAGTTGTGGTATGGTATCCCTGGCAGCGATGCCATTAAATTTGAAGAGGCAATGAGAAAGCACCTCCCTGGCCTATTTGAAGAACAACCTGACTTGCTTCATAAGTTGGTCACACAGCTTTCCCCCTCCATACTGAAATCTGAGGGGGTACCTGTGTATAGATGTTGTCAGAATCCAGGAGAGTTTGTTTTGACTTTTCCTCGAGCATACCATTCAGGGTTCAACTGTGGTTTCAATTGTGCCGAGGCAGTTAACGTAGCTCCTGTTGATTGGTTGCCCCATGGGCAGATTGCTATAGAGCTATACCAGGAGCAGGGACGAAAGACATCCATTTCCCACGATAAATTGTTGCTTGGGGCGGCAAGGGAAGCGGTGAGAGCACATTGGGAACTCAATTTACTGAAGAAGAACACTTCAGATAACTTAAGATGGAAAGATTTCTGTGGAAAGGATGGGATCTTAGCTAAAGCACTCAAGGCACGTGTTGAGATGGAGCATGTGAGGAGGGAATTCCTTTGCAGTTCTTCACAGGCATTGAAAATGGATAACAATTTTGATGCCACCAGTGAGAGGGAATGCAGCATTTGCTTTTTTGATTTGCATCTGTCAGCAGCTGGTTGTCATCATTGTTCCCCAGATAGATATGCGTGCTTAAATCATGCAAAGAAATTTTGTTCATGTGCTTGGAGCGCCAAATTTTTCCTCTTTCGTTATGACATGGATGAATTAAACATCCTTCTTGAGGCATTGGATGGAAAGTTGAGTGCGGTATACAGATGGGCTAGACTGGATCTTGGGCTGGCGCTAAGTTCTTATATTGCAAAAGACAATATGAAAGTTGGTAACTTATCTTATTCCTCCAGAGATGCTGTACTTAAAGAGGTTAGCTCACAGCCACAAAGCACTTGCTTTAAAGATCCGCTAGGAACAGAAATCTCTAAACAGAGTCCTATAAATCCAACTGGGATCACTGGTGAGACTTCTTCACAACAAAATATGAAGAGAGAAGAATCAATTTTCAACACTTCCAAGTCAAGAGTGCAGGTTTGCCAGTTGTCTCAAGAAGACACATCATATGCTATGAACTCAGATGCAACGAAATCTGGGATGAAGATGACTTCAGTTGAGAATGTTATACTTCTTAGTGATGATGAAGGAGATGAACCAAAGGAGCTACCTTCTAAAGAGGTATGTTTAGCTACCCAGTTAGAACTTTCGAAGAGATTGGTGGGTTCTGATGGAAAAGTGAGCCCTTCTAATTTTGAGAAAGAACCGATCTTAAATACACCGGGGACTGATGCAGCAGTGATGGGTGAAAAAGTTTTCAGCTTACCTGGTGGAGAGAAAAAAGATTTTTCATCTCATTCTGTGCTTGTGAAAGATGAACAGGATAATGGTGGACAATTAGGATCCAATCCACCTAACCTTCCTGTCAAGTTTGTTTCTATTAAGACAGAATGTGGTTCAAACACTAGCGACATCAGTGCACACAAAGTTGCTAATTCCAGGAGTGACCCACAGCATTCACAGCCCTGTAGCAGTATAAAACTTGAGAATGAGGACAGACATGAAAAGGTAGGAACAAATGCTGACACAAATTTAGTGGACTGTGTAAGAACTACAACTGGAAGCCTGTCATCCTGCCAAAACAATTTGGACAGATACTTTCGCCAGAAGGGTCCCCGAATAGCAAAGGTAGTGCGGAGGATCTCCTGCATTGTTGAGCCTCTGGAATTTGGAGTTGTGCTCTCCGGAAAGTCATGGTGTAACAGCCAGGCCATTTTTCCAAAAGGATTTAGGAGCCGGGTTAGGCACATGAGTGTTCTGGATCCAACTGTTATGTGTTATTATGTTTCAGAAGTACTGGATGCTGGGCAGGCTGGACCACTGTTCAAGGTTTCTTTGGAGCACTGTCCAAGTGAGGTTTTCATACATAATTCAGCTGGCAGATGCTGGGAAATGGTGAGAGAGAGAGTCAATCAAGAAATCACCAGGCAACATAAATTGGGAAGAATGAACCTTCCTCCTTTGCAGCCACCTGGAAGTCTTGATGGCTTTGAAATGTTTGGGTTTACTTCACCAGCTATTGTACAGGCCATAGAGGCATTGGATCGAAATCGTGTCTGTTCCGAATACTGGGACTCCCGTCCCTACTCCCGACCTCAAGTACAGATTCTACAAAAACCTCAATCCAGAGAAAGTAGTGAAAATTGCAATAAAATGTCAAAGGAAAGAAATGATGAAGAGGCTCCCAACAATGATCTTGTCCCCACTGGAGTTGATACAACACTGAGAGGCCTATTGAAGAAGGCTAACCTAGAAGAATTAAACTCACTGTACAGAATTTTAAGTGACAATCAGCAAACTGCTGGTCGAGGCCTAGTGATACGGCTTCTTAATGAAGAGATTCATAGTCGTCCCACATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000976 GO:0001067 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003700 GO:0003824 GO:0005488 GO:0005506 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006259 GO:0006325 GO:0006355 GO:0006464 GO:0006479 GO:0006482 GO:0006725 GO:0006807 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0008168 GO:0008198 GO:0008213 GO:0008214 GO:0008276 GO:0009314 GO:0009416 GO:0009628 GO:0009648 GO:0009791 GO:0009889 GO:0009890 GO:0009892 GO:0009909 GO:0009910 GO:0009987 GO:0010216 GO:0010228 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0016043 GO:0016569 GO:0016570 GO:0016571 GO:0016577 GO:0016740 GO:0016741 GO:0019219 GO:0019222 GO:0019538 GO:0022414 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032259 GO:0032451 GO:0032452 GO:0032453 GO:0032501 GO:0032502 GO:0034641 GO:0034720 GO:0036211 GO:0040008 GO:0040009 GO:0040010 GO:0040029 GO:0042054 GO:0043167 GO:0043169 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043414 GO:0043565 GO:0044212 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0045814 GO:0045892 GO:0045927 GO:0045934 GO:0046483 GO:0046872 GO:0046914 GO:0048518 GO:0048519 GO:0048523 GO:0048573 GO:0048579 GO:0048580 GO:0048581 GO:0048583 GO:0048585 GO:0048586 GO:0048608 GO:0048731 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051093 GO:0051171 GO:0051172 GO:0051239 GO:0051241 GO:0051252 GO:0051253 GO:0051276 GO:0060255 GO:0061458 GO:0065007 GO:0070076 GO:0070988 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0097159 GO:0140096 GO:0140110 GO:1901360 GO:1901363 GO:1901564 GO:1902679 GO:1903506 GO:1903507 GO:1990837 GO:2000026 GO:2000028 GO:2000112 GO:2000113 GO:2000241 GO:2000242 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FYRC FYRN JmjC JmjN zf-C5HC2

Protein Analysis

1228

Amino Acids

138.31

Weight (kDa)

6.26

Isoelectric Point (pI)

50.48

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 558
Acc36I ACCTGC 1 cut(s) 2290
Acc65I GGTACC 1 cut(s) 1405
AccB1I GGYRCC 2 cut(s) 1159, 1405
AccB7I CCANNNNNTGG 1 cut(s) 728
AccI GTMKAC 1 cut(s) 2028
AccII CGCG 1 cut(s) 351
AccIII TCCGGA 2 cut(s) 400, 3008
AciI CCGC 8 cut(s) 351, 726, 946, 1616, 1628, 2024, 2177, 2959
AcuI CTGAAG 8 cut(s) 39, 410, 832, 987, 1041, 1656, 1679, 2361
AcvI CACGTG 1 cut(s) 1739
AfaI GTAC 8 cut(s) 1070, 1226, 1407, 2130, 3120, 3348, 3426, 3596
AfiI CCNNNNNNNGG 7 cut(s) 407, 546, 728, 1570, 1827, 1999, 3393
AflII CTTAAG 1 cut(s) 1681
AflIII ACRYGT 1 cut(s) 1738
AleI CACNNNNGTG 1 cut(s) 3075
Alw21I GWGCWC 5 cut(s) 1255, 1639, 2746, 3006, 3168
Alw26I GTCTC 8 cut(s) 146, 185, 231, 544, 581, 952, 2228, 2319
Alw44I GTGCAC 1 cut(s) 2742
AlwNI CAGNNNCTG 3 cut(s) 155, 1871, 3210
Ama87I CYCGRG 2 cut(s) 606, 1458
Aor13HI TCCGGA 2 cut(s) 400, 3008
AoxI GGCC 6 cut(s) 416, 1327, 3033, 3351, 3553, 3634
ApaLI GTGCAC 1 cut(s) 2742
ApeKI GCWGC 5 cut(s) 1281, 1836, 1868, 2558, 3289
ArsI GACNNNNNNTTYG 2 cut(s) 3613, 3645
Asp700I GAANNNNTTC 2 cut(s) 1694, 3663
Asp718I GGTACC 1 cut(s) 1405
AspLEI GCGC 2 cut(s) 1949, 2062
AspS9I GGNCC 4 cut(s) 417, 788, 2936, 3140
AsuC2I CCSGG 3 cut(s) 66, 2547, 3062
AsuHPI GGTGA 7 cut(s) 1208, 1642, 2243, 2582, 3232, 3238, 3327
AsuII TTCGAA 1 cut(s) 2474
AvaI CYCGRG 2 cut(s) 606, 1458
AvaII GGWCC 3 cut(s) 788, 2936, 3140
BaeGI GKGCMC 1 cut(s) 2746
BaeI ACNNNNGTAYC 2 cut(s) 1397, 1430
BamHI GGATCC 2 cut(s) 2666, 3085
BanI GGYRCC 2 cut(s) 1159, 1405
BanII GRGCYC 1 cut(s) 2510
BbrPI CACGTG 1 cut(s) 1739
BbsI GAAGAC 2 cut(s) 433, 2328
Bbv12I GWGCWC 5 cut(s) 1255, 1639, 2746, 3006, 3168
BbvI GCAGC 5 cut(s) 1293, 1848, 1880, 2570, 3301
BceAI ACGGC 1 cut(s) 3662
BcgI CGANNNNNNTGC 2 cut(s) 2723, 2757
BciVI GTATCC 1 cut(s) 1283
BcnI CCSGG 3 cut(s) 66, 2547, 3062
BcoDI GTCTC 8 cut(s) 146, 185, 231, 544, 581, 952, 2228, 2319
BfaI CTAG 8 cut(s) 159, 803, 1104, 2040, 2180, 2730, 3575, 3638
BfmI CTRYAG 3 cut(s) 629, 1551, 2791
BfoI RGCGCY 2 cut(s) 1950, 2063
BfrI CTTAAG 1 cut(s) 1681
BfuAI ACCTGC 1 cut(s) 2290
BfuI GTATCC 1 cut(s) 1283
BglI GCCNNNNNGGC 2 cut(s) 1540, 3359
BisI GCNGC 6 cut(s) 1282, 1617, 1837, 1869, 2559, 3290
BlsI GCNGC 6 cut(s) 1283, 1618, 1838, 1870, 2560, 3291
BmcAI AGTACT 1 cut(s) 3120
Bme18I GGWCC 3 cut(s) 788, 2936, 3140
BmeT110I CYCGRG 2 cut(s) 606, 1458
BmgT120I GGNCC 4 cut(s) 417, 788, 2936, 3140
BmiI GGNNCC 9 cut(s) 912, 1161, 1407, 2668, 2937, 2938, 3059, 3087, 3507
BmrI ACTGGG 3 cut(s) 2229, 2455, 3403
BmuI ACTGGG 3 cut(s) 2229, 2455, 3403
BoxI GACNNNNGTC 1 cut(s) 3402
BpiI GAAGAC 2 cut(s) 433, 2328
BplI GAGNNNNNCTC 6 cut(s) 275, 307, 2129, 2161, 2988, 3020
BpmI CTGGAG 3 cut(s) 1026, 2101, 3552
Bpu14I TTCGAA 1 cut(s) 2474
BpuEI CTTGAG 6 cut(s) 551, 1715, 2018, 2301, 2828, 3405
BpuMI CCSGG 3 cut(s) 66, 2547, 3062
BsaAI YACGTR 3 cut(s) 497, 1174, 1739
BsaBI GATNNNNATC 2 cut(s) 1857, 3372
BsaI GGTCTC 4 cut(s) 231, 544, 581, 952
BsaJI CCNNGG 8 cut(s) 242, 336, 1163, 1276, 1324, 1500, 1537, 2546
BsaWI WCCGGW 2 cut(s) 400, 3008
BsaXI ACNNNNNCTCC 4 cut(s) 1428, 1458, 3383, 3413
Bsc4I CCNNNNNNNGG 7 cut(s) 407, 546, 728, 1570, 1827, 1999, 3393
Bse3DI GCAATG 2 cut(s) 198, 1314
Bse8I GATNNNNATC 2 cut(s) 1857, 3372
BseAI TCCGGA 2 cut(s) 400, 3008
BseDI CCNNGG 8 cut(s) 242, 336, 1163, 1276, 1324, 1500, 1537, 2546
BseJI GATNNNNATC 2 cut(s) 1857, 3372
BseLI CCNNNNNNNGG 7 cut(s) 407, 546, 728, 1570, 1827, 1999, 3393
BseMI GCAATG 2 cut(s) 198, 1314
BseMII CTCAG 5 cut(s) 162, 285, 1389, 2358, 3539
BseRI GAGGAG 2 cut(s) 473, 1774
BseSI GKGCMC 1 cut(s) 2746
BseXI GCAGC 5 cut(s) 1293, 1848, 1880, 2570, 3301
BseYI CCCAGC 3 cut(s) 906, 3128, 3210
BsgI GTGCAG 1 cut(s) 2318
Bsh1236I CGCG 1 cut(s) 351
BshFI GGCC 6 cut(s) 418, 1329, 3035, 3353, 3555, 3636
BshNI GGYRCC 2 cut(s) 1159, 1405
BsiHKAI GWGCWC 5 cut(s) 1255, 1639, 2746, 3006, 3168
BsiHKCI CYCGRG 2 cut(s) 606, 1458
BsiSI CCGG 5 cut(s) 66, 401, 2546, 3009, 3061
BslFI GGGAC 8 cut(s) 19, 1587, 2563, 2922, 3390, 3410, 3509, 3660
BslI CCNNNNNNNGG 7 cut(s) 407, 546, 728, 1570, 1827, 1999, 3393
BsmAI GTCTC 8 cut(s) 146, 185, 231, 544, 581, 952, 2228, 2319
BsmFI GGGAC 8 cut(s) 19, 1587, 2563, 2922, 3390, 3410, 3509, 3660
BsmI GAATGC 2 cut(s) 1838, 2779
BsnI GGCC 6 cut(s) 418, 1329, 3035, 3353, 3555, 3636
Bso31I GGTCTC 4 cut(s) 231, 544, 581, 952
BsoBI CYCGRG 2 cut(s) 606, 1458
Bsp119I TTCGAA 1 cut(s) 2474
Bsp1286I GDGCHC 6 cut(s) 1255, 1639, 2510, 2746, 3006, 3168
Bsp13I TCCGGA 2 cut(s) 400, 3008
Bsp1407I TGTACA 2 cut(s) 3346, 3594
Bsp19I CCATGG 3 cut(s) 242, 1163, 1537
BspACI CCGC 8 cut(s) 351, 726, 946, 1616, 1628, 2024, 2177, 2959
BspANI GGCC 6 cut(s) 418, 1329, 3035, 3353, 3555, 3636
BspCNI CTCAG 5 cut(s) 161, 286, 1390, 2357, 3540
BspEI TCCGGA 2 cut(s) 400, 3008
BspFNI CGCG 1 cut(s) 351
BspHI TCATGA 1 cut(s) 15
BspLI GGNNCC 9 cut(s) 912, 1161, 1407, 2668, 2937, 2938, 3059, 3087, 3507
BspMAI CTGCAG 1 cut(s) 633
BspMI ACCTGC 1 cut(s) 2290
BspQI GCTCTTC 1 cut(s) 1056
BspT104I TTCGAA 1 cut(s) 2474
BspT107I GGYRCC 2 cut(s) 1159, 1405
BspTI CTTAAG 1 cut(s) 1681
BspTNI GGTCTC 4 cut(s) 231, 544, 581, 952
BsrDI GCAATG 2 cut(s) 198, 1314
BsrGI TGTACA 2 cut(s) 3346, 3594
BssECI CCNNGG 8 cut(s) 242, 336, 1163, 1276, 1324, 1500, 1537, 2546
BssNAI GTATAC 1 cut(s) 2029
BssT1I CCWWGG 4 cut(s) 242, 336, 1163, 1537
Bst1107I GTATAC 1 cut(s) 2029
Bst4CI ACNGT 6 cut(s) 1484, 2867, 3094, 3147, 3170, 3594
Bst6I CTCTTC 9 cut(s) 333, 450, 547, 1056, 1296, 2252, 2471, 3495, 3654
BstAFI CTTAAG 1 cut(s) 1681
BstAPI GCANNNNNTGC 1 cut(s) 1842
BstAUI TGTACA 2 cut(s) 3346, 3594
BstBAI YACGTR 3 cut(s) 497, 1174, 1739
BstBI TTCGAA 1 cut(s) 2474
BstC8I GCNNGC 6 cut(s) 490, 1202, 1906, 2058, 3135, 3202
BstDEI CTNAG 8 cut(s) 148, 294, 1398, 1717, 2063, 2344, 2399, 3548
BstDSI CCRYGG 3 cut(s) 242, 1163, 1537
BstENI CCTNNNNNAGG 1 cut(s) 1997
BstFNI CGCG 1 cut(s) 351
BstH2I RGCGCY 2 cut(s) 1950, 2063
BstHHI GCGC 2 cut(s) 1949, 2062
BstMAI GTCTC 8 cut(s) 146, 185, 231, 544, 581, 952, 2228, 2319
BstMWI GCNNNNNNNGC 9 cut(s) 1540, 1625, 1634, 1733, 1842, 1946, 2785, 3134, 3359
BstNSI RCATGY 2 cut(s) 1208, 1757
BstPAI GACNNNNGTC 1 cut(s) 3402
BstSFI CTRYAG 3 cut(s) 629, 1551, 2791
BstSLI GKGCMC 1 cut(s) 2746
BstSNI TACGTA 1 cut(s) 1174
BstUI CGCG 1 cut(s) 351
BstV1I GCAGC 5 cut(s) 1293, 1848, 1880, 2570, 3301
BstV2I GAAGAC 2 cut(s) 433, 2328
BstX2I RGATCY 8 cut(s) 737, 1115, 1713, 2047, 2173, 2666, 2964, 3085
BstXI CCANNNNNNTGG 1 cut(s) 1263
BstYI RGATCY 8 cut(s) 737, 1115, 1713, 2047, 2173, 2666, 2964, 3085
BstZ17I GTATAC 1 cut(s) 2029
BsuI GTATCC 1 cut(s) 1283
BsuRI GGCC 6 cut(s) 418, 1329, 3035, 3353, 3555, 3636
BtgI CCRYGG 3 cut(s) 242, 1163, 1537
BtgZI GCGATG 1 cut(s) 1299
BtsI GCAGTG 3 cut(s) 1024, 1144, 2568
BveI ACCTGC 1 cut(s) 2290
Cac8I GCNNGC 6 cut(s) 490, 1202, 1906, 2058, 3135, 3202
CaiI CAGNNNCTG 3 cut(s) 155, 1871, 3210
CciI TCATGA 1 cut(s) 15
CfoI GCGC 2 cut(s) 1949, 2062
Cfr13I GGNCC 4 cut(s) 417, 788, 2936, 3140
CseI GACGC 1 cut(s) 243
CsiI ACCWGGT 2 cut(s) 784, 2590
Csp6I GTAC 8 cut(s) 1069, 1225, 1406, 2129, 3119, 3347, 3425, 3595
CspCI CAANNNNNGTGG 4 cut(s) 2841, 2876, 3517, 3552
CviQI GTAC 8 cut(s) 1069, 1225, 1406, 2129, 3119, 3347, 3425, 3595
DdeI CTNAG 8 cut(s) 148, 294, 1398, 1717, 2063, 2344, 2399, 3548
DraI TTTAAA 2 cut(s) 1233, 2170
DrdI GACNNNNNNGTC 1 cut(s) 558
DseDI GACNNNNNNGTC 1 cut(s) 558
Eam1104I CTCTTC 9 cut(s) 333, 450, 547, 1056, 1296, 2252, 2471, 3495, 3654
EarI CTCTTC 9 cut(s) 333, 450, 547, 1056, 1296, 2252, 2471, 3495, 3654
EciI GGCGGA 1 cut(s) 961
Eco105I TACGTA 1 cut(s) 1174
Eco130I CCWWGG 4 cut(s) 242, 336, 1163, 1537
Eco147I AGGCCT 2 cut(s) 3555, 3636
Eco24I GRGCYC 1 cut(s) 2510
Eco31I GGTCTC 4 cut(s) 231, 544, 581, 952
Eco47I GGWCC 3 cut(s) 788, 2936, 3140
Eco57I CTGAAG 8 cut(s) 39, 410, 832, 987, 1041, 1656, 1679, 2361
Eco72I CACGTG 1 cut(s) 1739
Eco88I CYCGRG 2 cut(s) 606, 1458
EcoNI CCTNNNNNAGG 1 cut(s) 1997
EcoO109I RGGNCCY 1 cut(s) 2936
EcoRI GAATTC 1 cut(s) 1766
EcoT14I CCWWGG 4 cut(s) 242, 336, 1163, 1537
EcoT22I ATGCAT 1 cut(s) 1245
EcoT38I GRGCYC 1 cut(s) 2510
ErhI CCWWGG 4 cut(s) 242, 336, 1163, 1537
FaqI GGGAC 8 cut(s) 19, 1587, 2563, 2922, 3390, 3410, 3509, 3660
FauNDI CATATG 3 cut(s) 514, 675, 2332
FblI GTMKAC 1 cut(s) 2028
Fnu4HI GCNGC 6 cut(s) 1282, 1617, 1837, 1869, 2559, 3290
FriOI GRGCYC 1 cut(s) 2510
Fsp4HI GCNGC 6 cut(s) 1282, 1617, 1837, 1869, 2559, 3290
FspBI CTAG 8 cut(s) 159, 803, 1104, 2040, 2180, 2730, 3575, 3638
GlaI GCGC 2 cut(s) 1948, 2061
GluI GCNGC 6 cut(s) 1282, 1617, 1837, 1869, 2559, 3290
GsaI CCCAGC 3 cut(s) 910, 3132, 3214
GsuI CTGGAG 3 cut(s) 1026, 2101, 3552
HaeII RGCGCY 2 cut(s) 1950, 2063
HaeIII GGCC 6 cut(s) 418, 1329, 3035, 3353, 3555, 3636
HapII CCGG 5 cut(s) 66, 401, 2546, 3009, 3061
HgaI GACGC 1 cut(s) 243
HhaI GCGC 2 cut(s) 1949, 2062
Hin6I GCGC 2 cut(s) 1947, 2060
HinP1I GCGC 2 cut(s) 1947, 2060
HincII GTYRAC 2 cut(s) 622, 1510
HindII GTYRAC 2 cut(s) 622, 1510
HpaI GTTAAC 1 cut(s) 1510
HpaII CCGG 5 cut(s) 66, 401, 2546, 3009, 3061
HphI GGTGA 7 cut(s) 1208, 1642, 2243, 2582, 3232, 3238, 3327
Hpy166II GTNNAC 9 cut(s) 359, 622, 798, 1510, 2029, 2657, 2744, 2863, 3330
Hpy8I GTNNAC 9 cut(s) 359, 622, 798, 1510, 2029, 2657, 2744, 2863, 3330
Hpy99I CGWCG 1 cut(s) 237
HpyCH4III ACNGT 6 cut(s) 1484, 2867, 3094, 3147, 3170, 3594
HpyCH4IV ACGT 4 cut(s) 496, 1173, 1512, 1738
HpyF10VI GCNNNNNNNGC 9 cut(s) 1540, 1625, 1634, 1733, 1842, 1946, 2785, 3134, 3359
HpyF3I CTNAG 8 cut(s) 148, 294, 1398, 1717, 2063, 2344, 2399, 3548
HpySE526I ACGT 4 cut(s) 496, 1173, 1512, 1738
HspAI GCGC 2 cut(s) 1947, 2060
KflI GGGWCCC 1 cut(s) 2936
Kpn2I TCCGGA 2 cut(s) 400, 3008
KpnI GGTACC 1 cut(s) 1409
KspAI GTTAAC 1 cut(s) 1510
LguI GCTCTTC 1 cut(s) 1056
Lsp1109I GCAGC 5 cut(s) 1293, 1848, 1880, 2570, 3301
MabI ACCWGGT 2 cut(s) 784, 2590
MaeI CTAG 8 cut(s) 159, 803, 1104, 2040, 2180, 2730, 3575, 3638
MaeII ACGT 4 cut(s) 496, 1173, 1512, 1738
MaeIII GTNAC 6 cut(s) 881, 1366, 2099, 2768, 3023, 3608
MfeI CAATTG 1 cut(s) 1492
MflI RGATCY 8 cut(s) 737, 1115, 1713, 2047, 2173, 2666, 2964, 3085
MhlI GDGCHC 6 cut(s) 1255, 1639, 2510, 2746, 3006, 3168
MlyI GAGTC 5 cut(s) 83, 618, 2212, 3240, 3392
MmeI TCCRAC 3 cut(s) 256, 2240, 3113
Mph1103I ATGCAT 1 cut(s) 1245
MroI TCCGGA 2 cut(s) 400, 3008
MroXI GAANNNNTTC 2 cut(s) 1694, 3663
MslI CAYNNNNRTG 3 cut(s) 704, 1248, 3075
MspA1I CMGCKG 2 cut(s) 1871, 3200
MspCI CTTAAG 1 cut(s) 1681
MspI CCGG 5 cut(s) 66, 401, 2546, 3009, 3061
MunI CAATTG 1 cut(s) 1492
Mva1269I GAATGC 2 cut(s) 1838, 2779
MvnI CGCG 1 cut(s) 351
MwoI GCNNNNNNNGC 9 cut(s) 1540, 1625, 1634, 1733, 1842, 1946, 2785, 3134, 3359
NciI CCSGG 3 cut(s) 66, 2547, 3062
NcoI CCATGG 3 cut(s) 242, 1163, 1537
NdeI CATATG 3 cut(s) 514, 675, 2332
NlaIV GGNNCC 9 cut(s) 912, 1161, 1407, 2668, 2937, 2938, 3059, 3087, 3507
NmeAIII GCCGAG 1 cut(s) 1525
NmuCI GTSAC 3 cut(s) 1366, 2768, 3608
NsiI ATGCAT 1 cut(s) 1245
NspI RCATGY 2 cut(s) 1208, 1757
NspV TTCGAA 1 cut(s) 2474
OliI CACNNNNGTG 1 cut(s) 3075
PaeR7I CTCGAG 2 cut(s) 606, 1458
PagI TCATGA 1 cut(s) 15
PceI AGGCCT 2 cut(s) 3555, 3636
PciSI GCTCTTC 1 cut(s) 1056
PctI GAATGC 2 cut(s) 1838, 2779
PdmI GAANNNNTTC 2 cut(s) 1694, 3663
PfeI GAWTC 8 cut(s) 170, 634, 641, 655, 1429, 2267, 3430, 3664
PflMI CCANNNNNTGG 1 cut(s) 728
PfoI TCCNGGA 3 cut(s) 1111, 1432, 2762
PkrI GCNGC 6 cut(s) 1283, 1618, 1838, 1870, 2560, 3291
PleI GAGTC 5 cut(s) 82, 617, 2211, 3239, 3392
PmaCI CACGTG 1 cut(s) 1739
PmlI CACGTG 1 cut(s) 1739
PpsI GAGTC 5 cut(s) 82, 617, 2211, 3239, 3392
Ppu21I YACGTR 3 cut(s) 497, 1174, 1739
PpuMI RGGWCCY 1 cut(s) 2936
PshAI GACNNNNGTC 1 cut(s) 3402
Psp5II RGGWCCY 1 cut(s) 2936
PspCI CACGTG 1 cut(s) 1739
PspFI CCCAGC 3 cut(s) 906, 3128, 3210
PspN4I GGNNCC 9 cut(s) 912, 1161, 1407, 2668, 2937, 2938, 3059, 3087, 3507
PspPI GGNCC 4 cut(s) 417, 788, 2936, 3140
PspPPI RGGWCCY 1 cut(s) 2936
PspXI VCTCGAGB 2 cut(s) 606, 1458
PsrI GAACNNNNNNTAC 2 cut(s) 1638, 1670
PstI CTGCAG 1 cut(s) 633
PstNI CAGNNNCTG 3 cut(s) 155, 1871, 3210
PsuI RGATCY 8 cut(s) 737, 1115, 1713, 2047, 2173, 2666, 2964, 3085
PvuII CAGCTG 2 cut(s) 1871, 3200
RsaI GTAC 8 cut(s) 1070, 1226, 1407, 2130, 3120, 3348, 3426, 3596
RsaNI GTAC 8 cut(s) 1069, 1225, 1406, 2129, 3119, 3347, 3425, 3595
RseI CAYNNNNRTG 3 cut(s) 704, 1248, 3075
SapI GCTCTTC 1 cut(s) 1056
SatI GCNGC 6 cut(s) 1282, 1617, 1837, 1869, 2559, 3290
Sau96I GGNCC 4 cut(s) 417, 788, 2936, 3140
ScaI AGTACT 1 cut(s) 3120
SchI GAGTC 5 cut(s) 83, 618, 2212, 3240, 3392
SduI GDGCHC 6 cut(s) 1255, 1639, 2510, 2746, 3006, 3168
SexAI ACCWGGT 2 cut(s) 784, 2590
SfcI CTRYAG 3 cut(s) 629, 1551, 2791
Sfr274I CTCGAG 2 cut(s) 606, 1458
SfuI TTCGAA 1 cut(s) 2474
SinI GGWCC 3 cut(s) 788, 2936, 3140
SlaI CTCGAG 2 cut(s) 606, 1458
SmiMI CAYNNNNRTG 3 cut(s) 704, 1248, 3075
SmlI CTYRAG 9 cut(s) 566, 606, 1458, 1681, 1730, 1997, 2316, 2807, 3420
SmoI CTYRAG 9 cut(s) 566, 606, 1458, 1681, 1730, 1997, 2316, 2807, 3420
SnaBI TACGTA 1 cut(s) 1174
SseBI AGGCCT 2 cut(s) 3555, 3636
SsiI CCGC 8 cut(s) 351, 726, 946, 1616, 1628, 2024, 2177, 2959
SspI AATATT 2 cut(s) 928, 941
SspMI CTAG 8 cut(s) 159, 803, 1104, 2040, 2180, 2730, 3575, 3638
StuI AGGCCT 2 cut(s) 3555, 3636
StyI CCWWGG 4 cut(s) 242, 336, 1163, 1537
TaaI ACNGT 6 cut(s) 1484, 2867, 3094, 3147, 3170, 3594
TaiI ACGT 4 cut(s) 499, 1176, 1515, 1741
TaqI TCGA 6 cut(s) 607, 637, 1459, 2474, 3370, 3631
TatI WGTACW 7 cut(s) 1068, 1224, 2128, 3118, 3346, 3424, 3594
TauI GCSGC 1 cut(s) 1619
TfiI GAWTC 8 cut(s) 170, 634, 641, 655, 1429, 2267, 3430, 3664
TseFI GTSAC 3 cut(s) 1366, 2768, 3608
TseI GCWGC 5 cut(s) 1281, 1836, 1868, 2558, 3289
Tsp45I GTSAC 3 cut(s) 1366, 2768, 3608
Van91I CCANNNNNTGG 1 cut(s) 728
Vha464I CTTAAG 1 cut(s) 1681
VneI GTGCAC 1 cut(s) 2742
VpaK11BI GGWCC 3 cut(s) 788, 2936, 3140
XagI CCTNNNNNAGG 1 cut(s) 1997
XbaI TCTAGA 1 cut(s) 802
XceI RCATGY 2 cut(s) 1208, 1757
XcmI CCANNNNNNNNNTGG 1 cut(s) 3361
XhoI CTCGAG 2 cut(s) 606, 1458
XmiI GTMKAC 1 cut(s) 2028
XmnI GAANNNNTTC 2 cut(s) 1694, 3663
XspI CTAG 8 cut(s) 159, 803, 1104, 2040, 2180, 2730, 3575, 3638
ZrmI AGTACT 1 cut(s) 3120
Zsp2I ATGCAT 1 cut(s) 1245
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.