Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0015864

Physical Location & Seq

Genomic Coordinates Forward (+)

15042175 .. 15043575

Gene Structure 1401 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G35795.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 339 bp

ATGGCGACACCATTTATAGCGGGGGTTGCAGTAGCTGCAACAGCACTTGCTGGTAGATATGGAATCCAAGCATGGCAAGCATTCAAGGCAAGGCCACCAAGGCCCAAAATTAAGAAATTTTATGAGGGCGGTTTCCAGCCTACGATGACGAAAAGGGAAGCTGCTCTCATTCTTGGCGTCAGGGAGAGTGTAGCGGCGGAAAAGGTGAAGGAAGCACACAGGAAGGTAATGGTAGCAAACCATCCAGATGCAGGTGGTAGCCATTTCCTAGCCTCTAAGATCAATGAAGCTAAAGACGTGATGCTAGGCAAAACTAAAAACAGCGGATCCGCTTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

112

Amino Acids

12.0

Weight (kDa)

10.24

Isoelectric Point (pI)

18.52

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015864)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G35795
fragaria_vesca	FvH4_7g20090
malus_domestica	MD01G1130500.v1.1 MD07G1178600.v1.1
prunus_persica	Prupe.2G217700_v2.0.a1
pyrus_communis	pycom01g13930 pycom07g17220
rosa_chinensis	RchiOBHm_Chr1g0364051
rosa_multiflora	Rmu_sc0009677.1_g000021
rosa_roxburghii	Rroxscaffold_4G00292700
rosa_rugosa	Rorug01G0313100
rosa_samantha	Rh1AG320500 Rh1BG283700 Rh1CG300100
rosa_wichuraiana	Rw1G028410

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	242
Acc36I	ACCTGC	1 cut(s)	242
AciI	CCGC	6 cut(s)	20, 129, 194, 197, 324, 330
AclWI	GGATC	2 cut(s)	321, 334
AcsI	RAATTY	1 cut(s)	116
AcyI	GRCGYC	1 cut(s)	177
AfiI	CCNNNNNNNGG	1 cut(s)	251
AgsI	TTSAA	1 cut(s)	85
AjiI	CACGTC	1 cut(s)	298
AluBI	AGCT	3 cut(s)	35, 161, 290
AluI	AGCT	3 cut(s)	35, 161, 290
AlwI	GGATC	2 cut(s)	321, 334
AlwNI	CAGNNNCTG	1 cut(s)	35
AoxI	GGCC	2 cut(s)	92, 101
ApeKI	GCWGC	2 cut(s)	35, 161
ApoI	RAATTY	1 cut(s)	116
AspS9I	GGNCC	1 cut(s)	102
AsuHPI	GGTGA	1 cut(s)	217
BamHI	GGATCC	1 cut(s)	326
BbvI	GCAGC	2 cut(s)	22, 148
BccI	CCATC	1 cut(s)	249
BfaI	CTAG	2 cut(s)	269, 305
BfuAI	ACCTGC	1 cut(s)	242
BglI	GCCNNNNNGGC	1 cut(s)	100
BisI	GCNGC	3 cut(s)	36, 162, 195
BlsI	GCNGC	3 cut(s)	37, 163, 196
BmgBI	CACGTC	1 cut(s)	298
BmgT120I	GGNCC	1 cut(s)	102
BmiI	GGNNCC	1 cut(s)	328
BmsI	GCATC	2 cut(s)	238, 291
BsaHI	GRCGYC	1 cut(s)	177
BsaJI	CCNNGG	1 cut(s)	98
Bsc4I	CCNNNNNNNGG	1 cut(s)	251
BseDI	CCNNGG	1 cut(s)	98
BseGI	GGATG	1 cut(s)	241
BseLI	CCNNNNNNNGG	1 cut(s)	251
BseXI	GCAGC	2 cut(s)	22, 148
BshFI	GGCC	2 cut(s)	94, 103
BslI	CCNNNNNNNGG	1 cut(s)	251
BsmI	GAATGC	1 cut(s)	80
BsnI	GGCC	2 cut(s)	94, 103
Bsp143I	GATC	2 cut(s)	279, 326
BspACI	CCGC	6 cut(s)	20, 129, 194, 197, 324, 330
BspANI	GGCC	2 cut(s)	94, 103
BspLI	GGNNCC	1 cut(s)	328
BspMI	ACCTGC	1 cut(s)	242
BspPI	GGATC	2 cut(s)	321, 334
BssECI	CCNNGG	1 cut(s)	98
BssMI	GATC	2 cut(s)	279, 326
BssNI	GRCGYC	1 cut(s)	177
BssT1I	CCWWGG	1 cut(s)	98
BstACI	GRCGYC	1 cut(s)	177
BstAPI	GCANNNNNTGC	1 cut(s)	35
BstC8I	GCNNGC	1 cut(s)	78
BstDEI	CTNAG	1 cut(s)	276
BstF5I	GGATG	1 cut(s)	241
BstKTI	GATC	2 cut(s)	282, 329
BstMBI	GATC	2 cut(s)	279, 326
BstMWI	GCNNNNNNNGC	6 cut(s)	26, 35, 41, 77, 86, 100
BstV1I	GCAGC	2 cut(s)	22, 148
BstX2I	RGATCY	1 cut(s)	326
BstYI	RGATCY	1 cut(s)	326
BsuRI	GGCC	2 cut(s)	94, 103
BtrI	CACGTC	1 cut(s)	298
BtsCI	GGATG	1 cut(s)	241
BveI	ACCTGC	1 cut(s)	242
Cac8I	GCNNGC	1 cut(s)	78
CaiI	CAGNNNCTG	1 cut(s)	35
Cfr13I	GGNCC	1 cut(s)	102
CseI	GACGC	1 cut(s)	166
CviAII	CATG	1 cut(s)	72
CviJI	RGCY	8 cut(s)	35, 94, 103, 139, 161, 261, 272, 290
CviKI_1	RGCY	8 cut(s)	35, 94, 103, 139, 161, 261, 272, 290
DdeI	CTNAG	1 cut(s)	276
DpnI	GATC	2 cut(s)	281, 328
DpnII	GATC	2 cut(s)	279, 326
EciI	GGCGGA	1 cut(s)	212
Eco130I	CCWWGG	1 cut(s)	98
EcoT14I	CCWWGG	1 cut(s)	98
ErhI	CCWWGG	1 cut(s)	98
FaeI	CATG	1 cut(s)	75
FaiI	YATR	4 cut(s)	17, 60, 73, 123
FatI	CATG	1 cut(s)	71
FauI	CCCGC	1 cut(s)	13
Fnu4HI	GCNGC	3 cut(s)	36, 162, 195
FokI	GGATG	1 cut(s)	228
Fsp4HI	GCNGC	3 cut(s)	36, 162, 195
FspBI	CTAG	2 cut(s)	269, 305
GluI	GCNGC	3 cut(s)	36, 162, 195
HaeIII	GGCC	2 cut(s)	94, 103
HgaI	GACGC	1 cut(s)	166
Hin1I	GRCGYC	1 cut(s)	177
Hin1II	CATG	1 cut(s)	75
HinfI	GANTC	1 cut(s)	63
HphI	GGTGA	1 cut(s)	217
Hpy188III	TCNNGA	1 cut(s)	245
HpyAV	CCTTC	2 cut(s)	202, 217
HpyCH4IV	ACGT	1 cut(s)	297
HpyCH4V	TGCA	3 cut(s)	29, 38, 251
HpyF10VI	GCNNNNNNNGC	6 cut(s)	26, 35, 41, 77, 86, 100
HpyF3I	CTNAG	1 cut(s)	276
HpySE526I	ACGT	1 cut(s)	297
Hsp92I	GRCGYC	1 cut(s)	177
Hsp92II	CATG	1 cut(s)	75
Kzo9I	GATC	2 cut(s)	279, 326
LpnPI	CCDG	6 cut(s)	36, 149, 166, 205, 237, 258
Lsp1109I	GCAGC	2 cut(s)	22, 148
LweI	GCATC	2 cut(s)	238, 291
MaeI	CTAG	2 cut(s)	269, 305
MaeII	ACGT	1 cut(s)	297
MalI	GATC	2 cut(s)	281, 328
MboI	GATC	2 cut(s)	279, 326
MflI	RGATCY	1 cut(s)	326
MluCI	AATT	2 cut(s)	108, 116
MnlI	CCTC	2 cut(s)	118, 283
MseI	TTAA	1 cut(s)	111
MslI	CAYNNNNRTG	1 cut(s)	246
MspA1I	CMGCKG	1 cut(s)	324
Mva1269I	GAATGC	1 cut(s)	80
MwoI	GCNNNNNNNGC	6 cut(s)	26, 35, 41, 77, 86, 100
NdeII	GATC	2 cut(s)	279, 326
NlaIII	CATG	1 cut(s)	75
NlaIV	GGNNCC	1 cut(s)	328
PaqCI	CACCTGC	1 cut(s)	242
PctI	GAATGC	1 cut(s)	80
PfeI	GAWTC	1 cut(s)	63
PkrI	GCNGC	3 cut(s)	37, 163, 196
PspN4I	GGNNCC	1 cut(s)	328
PspPI	GGNCC	1 cut(s)	102
PstNI	CAGNNNCTG	1 cut(s)	35
PsuI	RGATCY	1 cut(s)	326
RseI	CAYNNNNRTG	1 cut(s)	246
SaqAI	TTAA	1 cut(s)	111
SatI	GCNGC	3 cut(s)	36, 162, 195
Sau3AI	GATC	2 cut(s)	279, 326
Sau96I	GGNCC	1 cut(s)	102
SetI	ASST	7 cut(s)	37, 163, 207, 228, 256, 292, 300
SfaNI	GCATC	2 cut(s)	238, 291
SfiI	GGCCNNNNNGGCC	1 cut(s)	100
SmiMI	CAYNNNNRTG	1 cut(s)	246
Sse9I	AATT	2 cut(s)	108, 116
SsiI	CCGC	6 cut(s)	20, 129, 194, 197, 324, 330
SspMI	CTAG	2 cut(s)	269, 305
StyI	CCWWGG	1 cut(s)	98
TaiI	ACGT	1 cut(s)	300
TasI	AATT	2 cut(s)	108, 116
TauI	GCSGC	1 cut(s)	197
TfiI	GAWTC	1 cut(s)	63
Tru1I	TTAA	1 cut(s)	111
Tru9I	TTAA	1 cut(s)	111
TseI	GCWGC	2 cut(s)	35, 161
TspDTI	ATGAA	1 cut(s)	300
XapI	RAATTY	1 cut(s)	116
XspI	CTAG	2 cut(s)	269, 305

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.